Your job contains 1 sequence.
>032460
MLQLSCNLHRPSQPLLLPRHYLSPISFPINHVKFNVNKEFVKITKIWTAIGAKKGGDRSS
EEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVS
RYDTSKGRIIYRLRNKISSD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032460
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2831681 - symbol:AT4G11175 species:3702 "Arabi... 290 1.4e-25 1
UNIPROTKB|P0C378 - symbol:infA "Translation initiation fa... 257 4.3e-22 1
UNIPROTKB|P0C379 - symbol:infA "Translation initiation fa... 257 4.3e-22 1
UNIPROTKB|P0C380 - symbol:infA "Translation initiation fa... 257 4.3e-22 1
UNIPROTKB|Q6END9 - symbol:infA "Translation initiation fa... 257 4.3e-22 1
TIGR_CMR|CHY_2286 - symbol:CHY_2286 "translation initiati... 213 2.0e-17 1
TIGR_CMR|BA_0133 - symbol:BA_0133 "translation initiation... 204 1.8e-16 1
UNIPROTKB|P0A5H5 - symbol:infA "Translation initiation fa... 195 1.6e-15 1
TIGR_CMR|GSU_1750 - symbol:GSU_1750 "translation initiati... 192 3.3e-15 1
TIGR_CMR|CPS_2765 - symbol:CPS_2765 "translation initiati... 190 5.4e-15 1
UNIPROTKB|P69222 - symbol:infA "protein chain initiation ... 189 6.9e-15 1
TIGR_CMR|SO_2625 - symbol:SO_2625 "translation initiation... 188 8.8e-15 1
UNIPROTKB|P65128 - symbol:infA "Translation initiation fa... 187 1.1e-14 1
TIGR_CMR|VC_1737 - symbol:VC_1737 "initiation factor IF-1... 187 1.1e-14 1
TIGR_CMR|CJE_1762 - symbol:CJE_1762 "translation initiati... 175 2.1e-13 1
TIGR_CMR|DET_0497 - symbol:DET_0497 "translation initiati... 175 2.1e-13 1
TIGR_CMR|CBU_1195 - symbol:CBU_1195 "translation initiati... 173 3.4e-13 1
TIGR_CMR|SPO_A0077 - symbol:SPO_A0077 "translation initia... 164 3.1e-12 1
TIGR_CMR|APH_0395 - symbol:APH_0395 "translation initiati... 132 7.6e-09 1
TIGR_CMR|ECH_0511 - symbol:ECH_0511 "translation initiati... 123 6.8e-08 1
GENEDB_PFALCIPARUM|PF14_0658 - symbol:PF14_0658 "translat... 114 6.1e-07 1
UNIPROTKB|Q8IKE7 - symbol:PF14_0658 "Translation initiati... 114 6.1e-07 1
TIGR_CMR|NSE_0882 - symbol:NSE_0882 "translation initiati... 100 1.9e-05 1
>TAIR|locus:2831681 [details] [associations]
symbol:AT4G11175 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] InterPro:IPR004368 InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161531 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AF080120
EMBL:AL049876 InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361
EMBL:BT003712 EMBL:AK117848 EMBL:AK221313 IPI:IPI00516598
PIR:T01915 PIR:T08196 RefSeq:NP_192856.1 UniGene:At.43672
ProteinModelPortal:O82499 SMR:O82499 IntAct:O82499 STRING:O82499
PaxDb:O82499 PRIDE:O82499 EnsemblPlants:AT4G11175.1 GeneID:826719
KEGG:ath:AT4G11175 TAIR:At4g11175 HOGENOM:HOG000113002
InParanoid:O82499 KO:K02518 OMA:LENGDNI PhylomeDB:O82499
ProtClustDB:CLSN2686083 Genevestigator:O82499 GermOnline:AT4G11175
TIGRFAMs:TIGR00008 Uniprot:O82499
Length = 141
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 71/145 (48%), Positives = 95/145 (65%)
Query: 1 MLQLSCNLHRPSQPLLLPRHY--LSPISFP-INHVKFNVNKEFVKITKIWTAIGAKKGGD 57
MLQL C+ RP LLLP + + + P IN+V N + + A G + G +
Sbjct: 1 MLQL-CSTFRPQ--LLLPCQFRFTNGVLIPQINYVASNSVVNIRPMIRCQRASGGRGGAN 57
Query: 58 RSS------EEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLP 111
RS +EG+N K V EG +TESLPNGMFRV L+N D ILGYI GKIR+NFIR+LP
Sbjct: 58 RSKPAKPQVKEGSN--KTVIEGLVTESLPNGMFRVDLENGDNILGYICGKIRKNFIRILP 115
Query: 112 GDRVRVEVSRYDTSKGRIIYRLRNK 136
GD+V+VE+S YD++KGRII+R+ ++
Sbjct: 116 GDKVKVEMSVYDSTKGRIIFRMSSR 140
>UNIPROTKB|P0C378 [details] [associations]
symbol:infA "Translation initiation factor IF-1,
chloroplastic" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00075 InterPro:IPR004368 InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 GO:GO:0009507 GO:GO:0009536
EMBL:AY522331 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 KO:K02518
TIGRFAMs:TIGR00008 ProtClustDB:CHL00010 RefSeq:NP_039420.1
ProteinModelPortal:P0C378 SMR:P0C378 PRIDE:P0C378 GeneID:3131394
KEGG:osa:3131394 Gramene:P0C378 HOGENOM:HOG000221323
Genevestigator:P0C378 Uniprot:P0C378
Length = 107
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 57 DRSSEEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVR 116
+R ++ K EG + E+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV+
Sbjct: 6 NRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVK 65
Query: 117 VEVSRYDTSKGRIIYRLRNKIS 138
+EVSRYD+SKGRIIYRL +K S
Sbjct: 66 IEVSRYDSSKGRIIYRLPHKDS 87
>UNIPROTKB|P0C379 [details] [associations]
symbol:infA "Translation initiation factor IF-1,
chloroplastic" species:39946 "Oryza sativa Indica Group"
[GO:0009536 "plastid" evidence=IC] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0009507 GO:GO:0009536 EMBL:AY522329 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 TIGRFAMs:TIGR00008
ProtClustDB:CHL00010 RefSeq:YP_654238.1 ProteinModelPortal:P0C379
SMR:P0C379 GeneID:4126928 Gramene:P0C379 Uniprot:P0C379
Length = 107
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 57 DRSSEEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVR 116
+R ++ K EG + E+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV+
Sbjct: 6 NRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVK 65
Query: 117 VEVSRYDTSKGRIIYRLRNKIS 138
+EVSRYD+SKGRIIYRL +K S
Sbjct: 66 IEVSRYDSSKGRIIYRLPHKDS 87
>UNIPROTKB|P0C380 [details] [associations]
symbol:infA "Translation initiation factor IF-1,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009536 "plastid" evidence=IC] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0009507 GO:GO:0009536 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
eggNOG:COG0361 KO:K02518 TIGRFAMs:TIGR00008 ProtClustDB:CHL00010
RefSeq:NP_039420.1 GeneID:3131394 KEGG:osa:3131394 PIR:JQ0261
ProteinModelPortal:P0C380 SMR:P0C380 STRING:P0C380
EnsemblPlants:LOC_Os04g16834.1 EnsemblPlants:LOC_Os05g22716.1
EnsemblPlants:LOC_Osp1g00690.1 Gramene:P0C380 OMA:KEDSIEM
Uniprot:P0C380
Length = 107
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 57 DRSSEEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVR 116
+R ++ K EG + E+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV+
Sbjct: 6 NRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVK 65
Query: 117 VEVSRYDTSKGRIIYRLRNKIS 138
+EVSRYD+SKGRIIYRL +K S
Sbjct: 66 IEVSRYDSSKGRIIYRLPHKDS 87
>UNIPROTKB|Q6END9 [details] [associations]
symbol:infA "Translation initiation factor IF-1,
chloroplastic" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_00075 InterPro:IPR004368 InterPro:IPR006196
Pfam:PF01176 PROSITE:PS50832 GO:GO:0009507 GO:GO:0009536
GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AP006728 InterPro:IPR022967 SMART:SM00316 TIGRFAMs:TIGR00008
RefSeq:YP_052784.1 ProteinModelPortal:Q6END9 SMR:Q6END9
GeneID:2885917 Gramene:Q6END9 ProtClustDB:CHL00010 Uniprot:Q6END9
Length = 107
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 57 DRSSEEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVR 116
+R ++ K EG + E+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV+
Sbjct: 6 NRREKKNPREAKITFEGLVMEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVK 65
Query: 117 VEVSRYDTSKGRIIYRLRNKIS 138
+EVSRYD+SKGRIIYRL +K S
Sbjct: 66 IEVSRYDSSKGRIIYRLPHKDS 87
>TIGR_CMR|CHY_2286 [details] [associations]
symbol:CHY_2286 "translation initiation factor IF-1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:MRMNYIK
RefSeq:YP_361095.1 ProteinModelPortal:Q3A9T9 SMR:Q3A9T9
STRING:Q3A9T9 GeneID:3726810 KEGG:chy:CHY_2286 PATRIC:21277643
BioCyc:CHYD246194:GJCN-2285-MONOMER Uniprot:Q3A9T9
Length = 72
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 40/61 (65%), Positives = 48/61 (78%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
EG + E LPN MFRV LDN +L ++SGKIR NFIR+LPGDRV VE+S YD ++GRIIY
Sbjct: 10 EGTVVEPLPNAMFRVELDNGHKVLAHVSGKIRMNFIRILPGDRVTVELSPYDLTRGRIIY 69
Query: 132 R 132
R
Sbjct: 70 R 70
>TIGR_CMR|BA_0133 [details] [associations]
symbol:BA_0133 "translation initiation factor IF-1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
eggNOG:COG0361 KO:K02518 TIGRFAMs:TIGR00008 HOGENOM:HOG000221323
RefSeq:NP_842701.1 RefSeq:YP_016738.1 RefSeq:YP_026419.1
ProteinModelPortal:Q81VQ7 SMR:Q81VQ7 DNASU:1087039
EnsemblBacteria:EBBACT00000010278 EnsemblBacteria:EBBACT00000015913
EnsemblBacteria:EBBACT00000021472 GeneID:1087039 GeneID:2818237
GeneID:2853052 KEGG:ban:BA_0133 KEGG:bar:GBAA_0133 KEGG:bat:BAS0133
OMA:MRMNYIK ProtClustDB:PRK00276 BioCyc:BANT260799:GJAJ-144-MONOMER
BioCyc:BANT261594:GJ7F-146-MONOMER Uniprot:Q81VQ7
Length = 72
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 36/63 (57%), Positives = 50/63 (79%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
EG + E+LPN MF+V L+N ++L ++SGKIR NFIR+LPGD+V VE+S YD ++GRI Y
Sbjct: 10 EGTVLETLPNAMFKVELENGHVVLAHVSGKIRMNFIRILPGDKVTVELSPYDLNRGRITY 69
Query: 132 RLR 134
R +
Sbjct: 70 RFK 72
>UNIPROTKB|P0A5H5 [details] [associations]
symbol:infA "Translation initiation factor IF-1"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005886 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842583 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361
KO:K02518 TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:MRMNYIK
ProtClustDB:PRK00276 PIR:C70566 RefSeq:NP_217979.1
RefSeq:NP_338094.1 RefSeq:YP_006516951.1 PDB:3I4O PDBsum:3I4O
ProteinModelPortal:P0A5H5 SMR:P0A5H5 PRIDE:P0A5H5
EnsemblBacteria:EBMYCT00000001619 EnsemblBacteria:EBMYCT00000069334
GeneID:13317069 GeneID:887325 GeneID:926629 KEGG:mtc:MT3568
KEGG:mtu:Rv3462c KEGG:mtv:RVBD_3462c PATRIC:18129575
TubercuList:Rv3462c EvolutionaryTrace:P0A5H5 Uniprot:P0A5H5
Length = 73
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 36/63 (57%), Positives = 49/63 (77%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
EG + E LPN MFR+ L+N +L +ISGK+RQ++IR+LP DRV VE+S YD S+GRI+Y
Sbjct: 11 EGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVY 70
Query: 132 RLR 134
R +
Sbjct: 71 RYK 73
>TIGR_CMR|GSU_1750 [details] [associations]
symbol:GSU_1750 "translation initiation factor IF-1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:NP_952800.1 ProteinModelPortal:P61688
SMR:P61688 GeneID:2685288 KEGG:gsu:GSU1750 PATRIC:22026347
BioCyc:GSUL243231:GH27-1719-MONOMER Uniprot:P61688
Length = 72
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 35/63 (55%), Positives = 49/63 (77%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
EG + E LPN MFRV L+N ++L +ISGK+R+ FI++LPGD+V VE+S YD ++GRI Y
Sbjct: 10 EGTVIEPLPNAMFRVELENGHVVLAHISGKMRKYFIKILPGDKVTVELSPYDLTRGRITY 69
Query: 132 RLR 134
R +
Sbjct: 70 RAK 72
>TIGR_CMR|CPS_2765 [details] [associations]
symbol:CPS_2765 "translation initiation factor IF-1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:YP_269477.1 ProteinModelPortal:Q480P2
SMR:Q480P2 STRING:Q480P2 PRIDE:Q480P2 GeneID:3522367
KEGG:cps:CPS_2765 PATRIC:21468569
BioCyc:CPSY167879:GI48-2826-MONOMER Uniprot:Q480P2
Length = 72
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 64 ANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYD 123
A E +G + ++LPN MFRV L+N ++ +ISGK+R+N+IR+L GD+V VE++ YD
Sbjct: 2 AKEENIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYD 61
Query: 124 TSKGRIIYRLR 134
SKGRII+R R
Sbjct: 62 LSKGRIIFRAR 72
>UNIPROTKB|P69222 [details] [associations]
symbol:infA "protein chain initiation factor IF-1"
species:83333 "Escherichia coli K-12" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0043022
"ribosome binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
HAMAP:MF_00075 InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0005840 GO:GO:0043022 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 EMBL:L10383 EMBL:M63145
eggNOG:COG0361 KO:K02518 TIGRFAMs:TIGR00008 HOGENOM:HOG000221323
OMA:KEDSIEM ProtClustDB:PRK00276 EMBL:Y00373 PIR:A27855
RefSeq:NP_415404.1 RefSeq:YP_489156.1 PDB:1AH9 PDB:1ZO1 PDBsum:1AH9
PDBsum:1ZO1 ProteinModelPortal:P69222 SMR:P69222 DIP:DIP-48250N
IntAct:P69222 PhosSite:P010441 PaxDb:P69222 PRIDE:P69222
EnsemblBacteria:EBESCT00000004907 EnsemblBacteria:EBESCT00000004908
EnsemblBacteria:EBESCT00000014525 GeneID:12933053 GeneID:945500
KEGG:ecj:Y75_p0856 KEGG:eco:b0884 PATRIC:32116977 EchoBASE:EB0499
EcoGene:EG10504 BioCyc:EcoCyc:EG10504-MONOMER
BioCyc:ECOL316407:JW0867-MONOMER EvolutionaryTrace:P69222
Genevestigator:P69222 Uniprot:P69222
Length = 72
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 34/63 (53%), Positives = 50/63 (79%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
+G + E+LPN MFRV L+N ++ +ISGK+R+N+IR+L GD+V VE++ YD SKGRI++
Sbjct: 10 QGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVF 69
Query: 132 RLR 134
R R
Sbjct: 70 RSR 72
>TIGR_CMR|SO_2625 [details] [associations]
symbol:SO_2625 "translation initiation factor IF-1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:NP_718210.1 ProteinModelPortal:Q8EDW6
SMR:Q8EDW6 GeneID:1170327 KEGG:son:SO_2625 PATRIC:23524877
Uniprot:Q8EDW6
Length = 72
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 33/63 (52%), Positives = 51/63 (80%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
+G I E+LPN MFRV L+N +++ +ISGK+R+N+IR+L GD+V V+++ YD +KGRI++
Sbjct: 10 QGTILETLPNTMFRVELENGHVVIAHISGKMRKNYIRILTGDKVTVQLTPYDLTKGRIVF 69
Query: 132 RLR 134
R R
Sbjct: 70 RAR 72
>UNIPROTKB|P65128 [details] [associations]
symbol:infA "Translation initiation factor IF-1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 OMA:KEDSIEM ProtClustDB:PRK00276 PIR:A82164
RefSeq:NP_231373.1 ProteinModelPortal:P65128 SMR:P65128
DNASU:2613742 GeneID:2613742 KEGG:vch:VC1737 PATRIC:20082528
Uniprot:P65128
Length = 72
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
+G + ++LPN MFRV L+N ++ +ISGK+R+N+IR+L GD+V VE++ YD SKGRI++
Sbjct: 10 QGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVEMTPYDLSKGRIVF 69
Query: 132 RLR 134
R R
Sbjct: 70 RAR 72
>TIGR_CMR|VC_1737 [details] [associations]
symbol:VC_1737 "initiation factor IF-1" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] HAMAP:MF_00075 InterPro:IPR004368
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 OMA:KEDSIEM ProtClustDB:PRK00276 PIR:A82164
RefSeq:NP_231373.1 ProteinModelPortal:P65128 SMR:P65128
DNASU:2613742 GeneID:2613742 KEGG:vch:VC1737 PATRIC:20082528
Uniprot:P65128
Length = 72
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
+G + ++LPN MFRV L+N ++ +ISGK+R+N+IR+L GD+V VE++ YD SKGRI++
Sbjct: 10 QGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVEMTPYDLSKGRIVF 69
Query: 132 RLR 134
R R
Sbjct: 70 RAR 72
>TIGR_CMR|CJE_1762 [details] [associations]
symbol:CJE_1762 "translation initiation factor IF-1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:MRMNYIK
ProtClustDB:PRK00276 RefSeq:YP_179734.1 ProteinModelPortal:Q5HSK1
SMR:Q5HSK1 STRING:Q5HSK1 GeneID:3232389 KEGG:cjr:CJE1762
PATRIC:20045334 BioCyc:CJEJ195099:GJC0-1792-MONOMER Uniprot:Q5HSK1
Length = 72
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 30/63 (47%), Positives = 49/63 (77%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
+G + E+LPN F+V LDN+ +IL +I+GK+R ++IR++PGD+V+VE++ Y KGRI +
Sbjct: 10 DGTVLEALPNANFKVELDNKHVILCHIAGKMRMHYIRIMPGDKVKVELTPYSLDKGRITF 69
Query: 132 RLR 134
R +
Sbjct: 70 RYK 72
>TIGR_CMR|DET_0497 [details] [associations]
symbol:DET_0497 "translation initiation factor IF-1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:YP_181241.1 ProteinModelPortal:Q3Z958
SMR:Q3Z958 STRING:Q3Z958 GeneID:3230225 KEGG:det:DET0497
PATRIC:21608063 BioCyc:DETH243164:GJNF-497-MONOMER Uniprot:Q3Z958
Length = 73
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIY 131
E + E+LP+ FRV+L N +L +ISGK+R ++IR+LPGDRV VE+S YD ++GR+ Y
Sbjct: 10 EATVLEALPSAAFRVQLSNGHEVLAHISGKMRVHYIRILPGDRVLVELSPYDLTRGRVTY 69
Query: 132 RLRN 135
R ++
Sbjct: 70 RFKS 73
>TIGR_CMR|CBU_1195 [details] [associations]
symbol:CBU_1195 "translation initiation factor IF-1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:NP_820190.1 ProteinModelPortal:Q83CD1
SMR:Q83CD1 PRIDE:Q83CD1 GeneID:1209099 KEGG:cbu:CBU_1195
PATRIC:17931133 BioCyc:CBUR227377:GJ7S-1183-MONOMER Uniprot:Q83CD1
Length = 83
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 64 ANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYD 123
A E +G + +SLPN FRV+L+N ++ +ISG++R+++IR+L GD V VE++ YD
Sbjct: 2 AKEESIEMQGTVVDSLPNTTFRVKLENGHVVTAHISGRMRKHYIRILTGDAVTVELTPYD 61
Query: 124 TSKGRIIYRLRNK 136
++GRI+YR K
Sbjct: 62 LTRGRIVYREAGK 74
>TIGR_CMR|SPO_A0077 [details] [associations]
symbol:SPO_A0077 "translation initiation factor IF-1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] HAMAP:MF_00075
InterPro:IPR004368 InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832
GO:GO:0005737 GO:GO:0003743 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CP000032 GenomeReviews:CP000032_GR
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 OMA:KEDSIEM
ProtClustDB:PRK00276 RefSeq:YP_164908.1 ProteinModelPortal:Q5LLF0
SMR:Q5LLF0 GeneID:3196692 KEGG:sil:SPOA0077 PATRIC:23381458
Uniprot:Q5LLF0
Length = 72
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 32/62 (51%), Positives = 45/62 (72%)
Query: 73 GFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKGRIIYR 132
G + E LPN FRV L+N I+ + +GK+R+N IRVL GD+V+VE++ YD +KGRI YR
Sbjct: 11 GVVKELLPNATFRVELENGHEIIAHTAGKMRKNRIRVLAGDKVQVEMTPYDLTKGRINYR 70
Query: 133 LR 134
+
Sbjct: 71 FK 72
>TIGR_CMR|APH_0395 [details] [associations]
symbol:APH_0395 "translation initiation factor IF-1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR004368
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
eggNOG:COG0361 KO:K02518 TIGRFAMs:TIGR00008 HOGENOM:HOG000221323
ProtClustDB:PRK00276 RefSeq:YP_505000.1 ProteinModelPortal:Q2GKV1
STRING:Q2GKV1 GeneID:3930608 KEGG:aph:APH_0395 PATRIC:20949398
OMA:IMAHASG BioCyc:APHA212042:GHPM-423-MONOMER Uniprot:Q2GKV1
Length = 81
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK----- 126
EG +T+ L + +F V+L++ I+ + SG+IR++ IR+L DRV VEVS Y +K
Sbjct: 11 EGVVTKLLRDAVFIVKLNDGYEIMAHASGRIRKSKIRILMHDRVMVEVSSYGVNKNGLGK 70
Query: 127 GRIIYRLRNK 136
GR++ RLRNK
Sbjct: 71 GRVVSRLRNK 80
>TIGR_CMR|ECH_0511 [details] [associations]
symbol:ECH_0511 "translation initiation factor IF-1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR004368
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
eggNOG:COG0361 KO:K02518 TIGRFAMs:TIGR00008 HOGENOM:HOG000221323
ProtClustDB:PRK00276 RefSeq:YP_507326.1 ProteinModelPortal:Q2GGV7
STRING:Q2GGV7 GeneID:3927464 KEGG:ech:ECH_0511 PATRIC:20576492
OMA:HASGKIR BioCyc:ECHA205920:GJNR-513-MONOMER Uniprot:Q2GGV7
Length = 82
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 72 EGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRY-----DTSK 126
EG + + L + F VRL++ I+ + SGKIR++ IR+L DRV VE+S Y + K
Sbjct: 11 EGIVIKLLRDATFMVRLNDNYEIIAHASGKIRKSKIRILMHDRVLVEISTYGINKGEVGK 70
Query: 127 GRIIYRLR 134
GRII RL+
Sbjct: 71 GRIIRRLK 78
>GENEDB_PFALCIPARUM|PF14_0658 [details] [associations]
symbol:PF14_0658 "translation initiation factor
EF-1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 EMBL:AE014187 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
GO:GO:0020011 KO:K03236 RefSeq:XP_001348832.1 HSSP:P02998
ProteinModelPortal:Q8IKE7 EnsemblProtists:PF14_0658:mRNA
GeneID:812240 KEGG:pfa:PF14_0658 EuPathDB:PlasmoDB:PF3D7_1469000
HOGENOM:HOG000136572 ProtClustDB:CLSZ2432619 Uniprot:Q8IKE7
Length = 182
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 21 YLSPISFPINHVKFNVNKEFVKITKIWTAIGAKKGGDRSSEEGANSEKWVHE--GFITES 78
+ IS+ H+K N+N F++ K I +K + +E E E G + E
Sbjct: 58 FFHKISWNKKHIKNNIN-HFLRDKK-GVHILYEKNENVKNEIPKTKENDTFEMNGVVVEC 115
Query: 79 LPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSR--YDTSKGRIIYR 132
L N F V + N + L +ISGK+R N +++ GD V+ ++ + ++ +G+I++R
Sbjct: 116 LANTNFIVSIPNGEKFLCFISGKLRINKVKINLGDMVKFQIHKLNFEKRRGKIVFR 171
>UNIPROTKB|Q8IKE7 [details] [associations]
symbol:PF14_0658 "Translation initiation factor EF-1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR006196 Pfam:PF01176
PROSITE:PS50832 EMBL:AE014187 GO:GO:0003743 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
GO:GO:0020011 KO:K03236 RefSeq:XP_001348832.1 HSSP:P02998
ProteinModelPortal:Q8IKE7 EnsemblProtists:PF14_0658:mRNA
GeneID:812240 KEGG:pfa:PF14_0658 EuPathDB:PlasmoDB:PF3D7_1469000
HOGENOM:HOG000136572 ProtClustDB:CLSZ2432619 Uniprot:Q8IKE7
Length = 182
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 33/116 (28%), Positives = 60/116 (51%)
Query: 21 YLSPISFPINHVKFNVNKEFVKITKIWTAIGAKKGGDRSSEEGANSEKWVHE--GFITES 78
+ IS+ H+K N+N F++ K I +K + +E E E G + E
Sbjct: 58 FFHKISWNKKHIKNNIN-HFLRDKK-GVHILYEKNENVKNEIPKTKENDTFEMNGVVVEC 115
Query: 79 LPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSR--YDTSKGRIIYR 132
L N F V + N + L +ISGK+R N +++ GD V+ ++ + ++ +G+I++R
Sbjct: 116 LANTNFIVSIPNGEKFLCFISGKLRINKVKINLGDMVKFQIHKLNFEKRRGKIVFR 171
>TIGR_CMR|NSE_0882 [details] [associations]
symbol:NSE_0882 "translation initiation factor IF-1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR004368
InterPro:IPR006196 Pfam:PF01176 PROSITE:PS50832 GO:GO:0003743
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0361 KO:K02518
TIGRFAMs:TIGR00008 HOGENOM:HOG000221323 ProtClustDB:PRK00276
RefSeq:YP_506748.1 ProteinModelPortal:Q2GCP8 STRING:Q2GCP8
GeneID:3932231 KEGG:nse:NSE_0882 PATRIC:22681753 OMA:EILAHSC
BioCyc:NSEN222891:GHFU-885-MONOMER Uniprot:Q2GCP8
Length = 93
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 73 GFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVS-RYDTSKGRIIY 131
G + E L FRVRL+N IL + GK+R+ I+++ D+V V + +YDT++G I+
Sbjct: 11 GEVIEVLRGPEFRVRLENGREILAHSCGKMRRKKIKIILSDKVVVSMFLQYDTNRGIIVE 70
Query: 132 R--LRNKISSD 140
R R K D
Sbjct: 71 REGFRKKRMDD 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 140 0.00091 102 3 11 22 0.43 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 586 (62 KB)
Total size of DFA: 140 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.87u 0.11s 13.98t Elapsed: 00:00:00
Total cpu time: 13.87u 0.11s 13.98t Elapsed: 00:00:00
Start: Sat May 11 05:58:47 2013 End: Sat May 11 05:58:47 2013