BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032460
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6MM71|IF1C_BUXMI Translation initiation factor IF-1, chloroplastic OS=Buxus
microphylla GN=infA PE=3 SV=1
Length = 77
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 72/74 (97%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGDRV++EVSRYD+S+
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSSR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GM3|IF1C_BOROF Translation initiation factor IF-1, chloroplastic OS=Borago
officinalis GN=infA PE=3 SV=2
Length = 77
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
EKW+HEG ITESLPNGMFRVRLDNEDL+LGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 EKWIHEGLITESLPNGMFRVRLDNEDLVLGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q94PL3|IF1C_MONCA Translation initiation factor IF-1, chloroplastic OS=Montinia
caryophyllacea GN=infA PE=3 SV=1
Length = 77
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q7ICQ5|IF1C_FOUSP Translation initiation factor IF-1, chloroplastic OS=Fouquieria
splendens GN=infA PE=3 SV=1
Length = 77
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q95GN3|IF1C_CERJA Translation initiation factor IF-1, chloroplastic OS=Cercidiphyllum
japonicum GN=infA PE=3 SV=1
Length = 77
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 72/74 (97%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KWVHEG ITESLPNGMFRVRLDNEDLILGYISG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWVHEGLITESLPNGMFRVRLDNEDLILGYISGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GM4|IF1C_GAREL Translation initiation factor IF-1, chloroplastic OS=Garrya
elliptica GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++F+R+LPGDRV+VEVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFMRILPGDRVKVEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q95GM5|IF1C_SAMCA Translation initiation factor IF-1, chloroplastic OS=Sambucus
canadensis GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNED+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q332U2|IF1C_LACSA Translation initiation factor IF-1, chloroplastic OS=Lactuca sativa
GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNED+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q1KXS4|IF1C_HELAN Translation initiation factor IF-1, chloroplastic OS=Helianthus
annuus GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNED+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|A0A370|IF1C_COFAR Translation initiation factor IF-1, chloroplastic OS=Coffea arabica
GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWTHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|P69042|IF1C_LAMPU Translation initiation factor IF-1, chloroplastic OS=Lamium
purpureum GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGD+V++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDKVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|P69041|IF1C_ANTMA Translation initiation factor IF-1, chloroplastic OS=Antirrhinum
majus GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGD+V++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDKVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q09FS6|IF1C_NANDO Translation initiation factor IF-1, chloroplastic OS=Nandina
domestica GN=infA PE=3 SV=1
Length = 77
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 72/74 (97%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q68RX2|IF1C_PANGI Translation initiation factor IF-1, chloroplastic OS=Panax ginseng
GN=infA PE=3 SV=1
Length = 77
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFR+RLDNED+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRIRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKNSKD 77
>sp|Q95GM6|IF1C_HEDHE Translation initiation factor IF-1, chloroplastic OS=Hedera helix
GN=infA PE=3 SV=1
Length = 77
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFR+RLDNED+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRIRLDNEDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKNSKD 77
>sp|Q09G11|IF1C_PLAOC Translation initiation factor IF-1, chloroplastic OS=Platanus
occidentalis GN=infA PE=3 SV=1
Length = 77
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 72/74 (97%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNEDLILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDLILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLR+K S+D
Sbjct: 64 GRIIYRLRSKDSND 77
>sp|Q0G9S7|IF1C_DAUCA Translation initiation factor IF-1, chloroplastic OS=Daucus carota
GN=infA PE=3 SV=1
Length = 77
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFR+RLDN+D+ILGY+SGKIR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRIRLDNQDMILGYVSGKIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q94KR7|IF1C_SOYBN Translation initiation factor IF-1, chloroplastic OS=Glycine max
GN=infA PE=2 SV=1
Length = 138
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 70/78 (89%)
Query: 62 EGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSR 121
+ + +KWVHEG I ESLPNGMFRVRLDNEDLILGYISGKIR+N++R+LPGDRV+VEV+R
Sbjct: 61 DKSGEQKWVHEGLIMESLPNGMFRVRLDNEDLILGYISGKIRKNYVRILPGDRVKVEVTR 120
Query: 122 YDTSKGRIIYRLRNKISS 139
YD+SKGRI+YRLR+ S
Sbjct: 121 YDSSKGRIVYRLRSSTPS 138
>sp|Q94KR8|IF1C_MESCR Translation initiation factor IF-1, chloroplastic
OS=Mesembryanthemum crystallinum GN=infA PE=2 SV=1
Length = 156
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 12/131 (9%)
Query: 6 CNLHRPSQPLLLPRHYLSPISFPINHVKFNVNKEFVKITKIWTAIGAKKGGDRSSEEGAN 65
CN + +PLL H+ P + K N+ V + + A A KGG S +E
Sbjct: 30 CNQQQQYKPLL---HHQWPPQISLK--KEKSNESIVAKSPVIAA--ATKGGSPSVQE--- 79
Query: 66 SEKWVHEGFITESLPNGMFRVRLDN-EDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDT 124
+KW+HEG ITESLPNGMF V+LDN EDL+LGYISG+IR++FIRVLPGDRV++EVSRYD+
Sbjct: 80 -QKWIHEGVITESLPNGMFWVKLDNCEDLVLGYISGRIRRSFIRVLPGDRVKIEVSRYDS 138
Query: 125 SKGRIIYRLRN 135
++GRI YRLRN
Sbjct: 139 TRGRITYRLRN 149
>sp|Q95GM7|IF1C_CORMA Translation initiation factor IF-1, chloroplastic OS=Cornus mas
GN=infA PE=3 SV=1
Length = 77
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW++EG ITESLPNGMFRVRLDNEDL LGY+SGKIR++FIRVLPGDRV++EVSRYD+++
Sbjct: 4 QKWINEGLITESLPNGMFRVRLDNEDLSLGYVSGKIRRSFIRVLPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|Q06GM5|IF1C_PIPCE Translation initiation factor IF-1, chloroplastic OS=Piper
cenocladum GN=infA PE=3 SV=1
Length = 77
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q0G9I4|IF1C_LIRTU Translation initiation factor IF-1, chloroplastic OS=Liriodendron
tulipifera GN=infA PE=3 SV=1
Length = 77
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|A6MMF7|IF1C_CHLSC Translation initiation factor IF-1, chloroplastic OS=Chloranthus
spicatus GN=infA PE=3 SV=1
Length = 77
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 71/74 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GM9|IF1C_BREMA Translation initiation factor IF-1, chloroplastic OS=Brexia
madagascariensis GN=infA PE=3 SV=1
Length = 77
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 70/73 (95%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNED ILGYISG+IR++FIR+LPGDRV++E+SRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNEDFILGYISGRIRRSFIRILPGDRVKIEISRYDSTR 63
Query: 127 GRIIYRLRNKISS 139
GRIIYRLRNK S+
Sbjct: 64 GRIIYRLRNKDSN 76
>sp|Q0ZIY4|IF1C_VITVI Translation initiation factor IF-1, chloroplastic OS=Vitis vinifera
GN=infA PE=3 SV=1
Length = 77
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 72/74 (97%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMFRVRLDNE++ILGY+SG+IR++FIR+LPGDRV++EVSRYD++K
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNENMILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTK 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYR+RNK S++
Sbjct: 64 GRIIYRIRNKDSNN 77
>sp|Q94KR9|IF1C_SOLLC Translation initiation factor IF-1, chloroplastic OS=Solanum
lycopersicum GN=infA PE=2 SV=1
Length = 156
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 66/71 (92%)
Query: 64 ANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYD 123
+ +KW HEG ITESLPNGMFRV+LDN D++LGYISGKIR+NFIR+LPGDRV++EVSRYD
Sbjct: 81 SQEQKWTHEGSITESLPNGMFRVKLDNADVVLGYISGKIRKNFIRLLPGDRVKIEVSRYD 140
Query: 124 TSKGRIIYRLR 134
+SKGRIIYRLR
Sbjct: 141 SSKGRIIYRLR 151
>sp|Q06GW2|IF1C_DRIGR Translation initiation factor IF-1, chloroplastic OS=Drimys
granadensis GN=infA PE=3 SV=1
Length = 77
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVS YD++K
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSSYDSTK 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|A6MMP2|IF1C_DIOEL Translation initiation factor IF-1, chloroplastic OS=Dioscorea
elephantipes GN=infA PE=3 SV=1
Length = 77
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG I ESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD++K
Sbjct: 4 QKLIHEGVIIESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTK 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|A6MMX9|IF1C_ILLOL Translation initiation factor IF-1, chloroplastic OS=Illicium
oligandrum GN=infA PE=3 SV=1
Length = 80
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 72/77 (93%), Gaps = 3/77 (3%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDN---EDLILGYISGKIRQNFIRVLPGDRVRVEVSRYD 123
+KW+HEG ITESLPNGMFRVRLDN EDLILGY+SG+IR++FIR+LPGDRV++EVSRYD
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNVDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYD 63
Query: 124 TSKGRIIYRLRNKISSD 140
+++GRIIYRLRNK S+D
Sbjct: 64 STRGRIIYRLRNKDSND 80
>sp|Q7YJU4|IF1C_CALFG Translation initiation factor IF-1, chloroplastic OS=Calycanthus
floridus var. glaucus GN=infA PE=3 SV=1
Length = 77
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVS YD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSSYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GN5|IF1C_ASACA Translation initiation factor IF-1, chloroplastic OS=Asarum
canadense GN=infA PE=3 SV=1
Length = 77
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG I ESLPNGMFRVRLDNEDLILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLIIESLPNGMFRVRLDNEDLILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q3BAK2|IF1C_PHAAO Translation initiation factor IF-1, chloroplastic OS=Phalaenopsis
aphrodite subsp. formosana GN=infA PE=3 SV=1
Length = 77
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNEDLILGYISG+IR++FIR+LPGDRV++E+SRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEDLILGYISGRIRRSFIRILPGDRVKIEMSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLR K S+D
Sbjct: 64 GRIIYRLRKKDSND 77
>sp|A8SED8|IF1C_CERDE Translation initiation factor IF-1, chloroplastic OS=Ceratophyllum
demersum GN=infA PE=3 SV=1
Length = 77
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMFRVRLDNE +ILGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFRVRLDNEKMILGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q6EW17|IF1C_NYMAL Translation initiation factor IF-1, chloroplastic OS=Nymphaea alba
GN=infA PE=3 SV=1
Length = 77
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF VRLDNEDL+LGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFWVRLDNEDLVLGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|A1XFZ0|IF1C_NUPAD Translation initiation factor IF-1, chloroplastic OS=Nuphar advena
GN=infA PE=3 SV=1
Length = 77
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF VRLDNEDL+LGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFWVRLDNEDLVLGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GN8|IF1C_CABCA Translation initiation factor IF-1, chloroplastic OS=Cabomba
caroliniana GN=infA PE=3 SV=1
Length = 77
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF VRLDNEDL+LGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFWVRLDNEDLVLGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GN9|IF1C_AMBTC Translation initiation factor IF-1, chloroplastic OS=Amborella
trichopoda GN=infA PE=3 SV=1
Length = 77
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 70/74 (94%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF+VRLDN DL+LGY+SG+IR++FIR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFQVRLDNGDLVLGYVSGRIRRSFIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|P08698|IF1C_SPIOL Translation initiation factor IF-1, chloroplastic OS=Spinacia
oleracea GN=infA PE=3 SV=1
Length = 77
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 69/74 (93%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESLPNGMF VRLDNED ILGY+SG+IR++ IR+LPGDRV++EVSRYD+++
Sbjct: 4 QKWIHEGLITESLPNGMFWVRLDNEDPILGYVSGRIRRSSIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S+D
Sbjct: 64 GRIIYRLRNKDSND 77
>sp|Q95GN7|IF1C_ILLPA Translation initiation factor IF-1, chloroplastic OS=Illicium
parviflorum GN=infA PE=3 SV=1
Length = 80
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 70/77 (90%), Gaps = 3/77 (3%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDN---EDLILGYISGKIRQNFIRVLPGDRVRVEVSRYD 123
+KW+HEG ITESLPNGMFRVRLDN EDLILGY+SG+IR++FIR+LPG RV++EVSR D
Sbjct: 4 QKWIHEGLITESLPNGMFRVRLDNVDNEDLILGYVSGRIRRSFIRILPGXRVKIEVSRXD 63
Query: 124 TSKGRIIYRLRNKISSD 140
+++GRIIYRLRNK S+B
Sbjct: 64 STRGRIIYRLRNKDSNB 80
>sp|Q3V4Z9|IF1C_ACOCL Translation initiation factor IF-1, chloroplastic OS=Acorus calamus
GN=infA PE=3 SV=1
Length = 77
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 69/74 (93%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF VRLDNEDL+LGYISG+IR++ IR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFWVRLDNEDLVLGYISGRIRRSSIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S++
Sbjct: 64 GRIIYRLRNKDSNE 77
>sp|A9LYD5|IF1C_ACOAM Translation initiation factor IF-1, chloroplastic OS=Acorus
americanus GN=infA PE=3 SV=1
Length = 77
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 69/74 (93%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+K +HEG ITESLPNGMF VRLDNEDL+LGYISG+IR++ IR+LPGDRV++EVSRYD+++
Sbjct: 4 QKLIHEGLITESLPNGMFWVRLDNEDLVLGYISGRIRRSSIRILPGDRVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S++
Sbjct: 64 GRIIYRLRNKDSNE 77
>sp|P30070|IF1C_EPIVI Translation initiation factor IF-1, plastid OS=Epifagus virginiana
GN=infA PE=3 SV=1
Length = 77
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 66/74 (89%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITESL NGMF VRLDN+DLI+GY+SG IR +FIR+LPGD+V++EVSRY++++
Sbjct: 4 QKWIHEGLITESLTNGMFWVRLDNKDLIIGYVSGNIRHSFIRILPGDKVKIEVSRYNSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK D
Sbjct: 64 GRIIYRLRNKYYKD 77
>sp|O82499|IF1C_ARATH Translation initiation factor IF-1, chloroplastic OS=Arabidopsis
thaliana GN=At4g11175 PE=2 SV=2
Length = 141
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 95/145 (65%), Gaps = 14/145 (9%)
Query: 1 MLQLSCNLHRPSQPLLLPRHY--LSPISFP-INHVKFNVNKEFVKITKIWTAIGAKKGGD 57
MLQL C+ RP LLLP + + + P IN+V N + + A G + G +
Sbjct: 1 MLQL-CSTFRPQ--LLLPCQFRFTNGVLIPQINYVASNSVVNIRPMIRCQRASGGRGGAN 57
Query: 58 RSS------EEGANSEKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLP 111
RS +EG+N K V EG +TESLPNGMFRV L+N D ILGYI GKIR+NFIR+LP
Sbjct: 58 RSKPAKPQVKEGSN--KTVIEGLVTESLPNGMFRVDLENGDNILGYICGKIRKNFIRILP 115
Query: 112 GDRVRVEVSRYDTSKGRIIYRLRNK 136
GD+V+VE+S YD++KGRII+R+ ++
Sbjct: 116 GDKVKVEMSVYDSTKGRIIFRMSSR 140
>sp|Q95GM2|IF1C_LEUFR Translation initiation factor IF-1, chloroplastic OS=Leucophyllum
frutescens GN=infA PE=3 SV=1
Length = 77
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 65/74 (87%)
Query: 67 EKWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSK 126
+KW+HEG ITES NGMFRVRLDN DLI Y+SGKIR++ IR+LPGD+V++EVSRYD+++
Sbjct: 4 QKWIHEGLITESPSNGMFRVRLDNXDLIPSYVSGKIRRSLIRILPGDKVKIEVSRYDSTR 63
Query: 127 GRIIYRLRNKISSD 140
GRIIYRLRNK S D
Sbjct: 64 GRIIYRLRNKDSKD 77
>sp|P58272|IF1C_WHEAT Translation initiation factor IF-1, chloroplastic OS=Triticum
aestivum GN=infA PE=3 SV=1
Length = 113
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++EVSRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
>sp|A1E9M5|IF1C_HORVU Translation initiation factor IF-1, chloroplastic OS=Hordeum
vulgare GN=infA PE=3 SV=2
Length = 113
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++EVSRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
>sp|A1E9V9|IF1C_SORBI Translation initiation factor IF-1, chloroplastic OS=Sorghum
bicolor GN=infA PE=3 SV=1
Length = 107
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++EVSRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
>sp|Q6ENS9|IF1C_SACOF Translation initiation factor IF-1, chloroplastic OS=Saccharum
officinarum GN=infA PE=3 SV=1
Length = 107
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++EVSRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
>sp|Q6L367|IF1C_SACHY Translation initiation factor IF-1, chloroplastic OS=Saccharum
hybrid GN=infA PE=3 SV=1
Length = 107
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++EVSRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEVSRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
>sp|P46618|IF1C_MAIZE Translation initiation factor IF-1, chloroplastic OS=Zea mays
GN=infA PE=3 SV=1
Length = 107
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 61/71 (85%)
Query: 68 KWVHEGFITESLPNGMFRVRLDNEDLILGYISGKIRQNFIRVLPGDRVRVEVSRYDTSKG 127
K EG +TE+LPNGMFRVRL+N+ +ILGYISGKIR + IR+L GDRV++E+SRYD+SKG
Sbjct: 17 KVTFEGLVTEALPNGMFRVRLENDTIILGYISGKIRSSSIRILMGDRVKIEISRYDSSKG 76
Query: 128 RIIYRLRNKIS 138
RIIYRL +K S
Sbjct: 77 RIIYRLPHKDS 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,379,505
Number of Sequences: 539616
Number of extensions: 2213462
Number of successful extensions: 5071
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4428
Number of HSP's gapped (non-prelim): 660
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)