Query 032464
Match_columns 140
No_of_seqs 308 out of 1272
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 23:47:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032464.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032464hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kci_A Putative acyl carrier p 99.8 5.6E-20 1.9E-24 125.1 7.7 77 61-138 2-79 (87)
2 2l9f_A CALE8, meacp; transfera 99.8 1.7E-19 5.7E-24 126.1 9.4 80 58-139 11-93 (102)
3 2ava_A ACP I, acyl carrier pro 99.8 8.4E-19 2.9E-23 115.7 9.5 82 58-139 1-82 (82)
4 2kjs_A Putative acyl carrier p 99.8 6.3E-19 2.1E-23 119.7 8.7 77 62-139 3-80 (87)
5 2kwl_A ACP, acyl carrier prote 99.8 1.3E-18 4.5E-23 115.4 8.9 79 56-135 4-83 (84)
6 3gzm_A Acyl carrier protein; h 99.8 8E-19 2.7E-23 116.0 7.6 78 58-136 2-80 (81)
7 1vku_A Acyl carrier protein; T 99.8 1.3E-18 4.5E-23 120.8 8.9 83 55-138 11-93 (100)
8 2dnw_A Acyl carrier protein; A 99.8 2.1E-18 7.1E-23 118.5 9.1 85 54-139 8-93 (99)
9 1af8_A Actinorhodin polyketide 99.8 5.8E-19 2E-23 117.6 6.0 82 57-139 1-86 (86)
10 2lol_A ACP, acyl carrier prote 99.8 3.4E-18 1.2E-22 112.4 9.5 78 57-135 2-80 (81)
11 3ejb_A Acyl carrier protein; p 99.8 6.8E-19 2.3E-23 121.2 6.1 80 55-135 16-96 (97)
12 4dxe_H ACP, acyl carrier prote 99.8 8E-19 2.7E-23 122.1 6.3 80 55-135 20-100 (101)
13 2l4b_A Acyl carrier protein; i 99.8 4.6E-19 1.6E-23 118.9 4.8 81 56-137 3-87 (88)
14 1x3o_A Acyl carrier protein; s 99.7 4.2E-18 1.4E-22 111.2 8.3 78 57-135 1-79 (80)
15 3ce7_A Specific mitochodrial a 99.7 5.2E-18 1.8E-22 119.0 8.8 81 57-139 15-101 (107)
16 1f80_D Acyl carrier protein; t 99.7 1.1E-18 3.9E-23 114.7 5.1 78 56-134 2-80 (81)
17 2cnr_A FAS, ACP, acyl carrier 99.7 6.8E-18 2.3E-22 110.9 8.1 78 57-135 3-81 (82)
18 2lki_A Putative uncharacterize 99.7 4.2E-18 1.4E-22 119.2 7.5 86 50-136 13-104 (105)
19 1dv5_A APO-DCP, APO-D-alanyl c 99.7 4.4E-18 1.5E-22 112.8 6.9 76 58-134 1-79 (80)
20 2qnw_A Acyl carrier protein; m 99.7 8.6E-18 2.9E-22 111.1 7.9 78 57-135 3-81 (82)
21 1klp_A ACP, ACPM, meromycolate 99.7 1.2E-17 4.1E-22 117.8 8.8 82 56-138 2-84 (115)
22 2kw2_A Specialized acyl carrie 99.7 1.1E-17 3.7E-22 115.8 8.1 79 61-140 3-93 (101)
23 2jq4_A AGR_C_4658P, hypothetic 99.7 1E-17 3.5E-22 117.0 7.3 83 56-139 17-103 (105)
24 2cgq_A Acyl carrier protein AC 99.7 4.2E-18 1.4E-22 120.9 4.5 82 51-139 21-103 (113)
25 2lte_A Specialized acyl carrie 99.5 7.7E-19 2.6E-23 122.5 0.0 86 50-137 13-101 (103)
26 2amw_A Hypothetical protein NE 99.7 7.9E-17 2.7E-21 106.9 7.7 75 61-136 2-82 (83)
27 1l0i_A Acyl carrier protein; a 99.7 4.7E-17 1.6E-21 106.2 6.2 75 60-135 2-77 (78)
28 1nq4_A Oxytetracycline polyket 99.7 8.8E-17 3E-21 110.0 7.4 78 62-139 5-85 (95)
29 1or5_A Acyl carrier protein; A 99.6 1.6E-17 5.6E-22 109.9 0.9 76 60-135 3-80 (83)
30 2ehs_A ACP, acyl carrier prote 99.6 3.3E-16 1.1E-20 101.3 7.1 73 62-135 2-75 (77)
31 1fh1_A NODF, nodulation protei 99.6 1.8E-17 6.1E-22 112.5 -1.5 80 60-139 3-92 (92)
32 2l3v_A ACP, acyl carrier prote 99.6 4.2E-17 1.5E-21 106.5 -0.5 75 60-135 3-78 (79)
33 2liu_A CURA; holo state, trans 99.6 1.2E-14 4.2E-19 97.9 9.3 83 56-139 16-98 (99)
34 2afd_A Protein ASL1650; twiste 99.6 1.8E-14 6.3E-19 95.0 9.1 79 56-135 9-87 (88)
35 2kr5_A PKS, aflatoxin biosynth 99.5 3.2E-14 1.1E-18 94.6 7.3 76 57-133 7-84 (89)
36 2cg5_B Fatty acid synthase; tr 99.5 1E-13 3.6E-18 94.9 6.8 70 64-134 9-78 (91)
37 2ju1_A Erythronolide synthase; 99.4 1.2E-13 4E-18 92.9 6.0 76 59-135 18-94 (95)
38 2l22_A Mupirocin didomain acyl 99.4 1.8E-13 6.3E-18 104.6 6.1 82 54-136 19-100 (212)
39 4i4d_A Peptide synthetase NRPS 99.4 8E-13 2.7E-17 89.3 7.3 77 59-138 14-90 (93)
40 1dny_A Non-ribosomal peptide s 99.4 1.7E-12 5.9E-17 87.7 7.0 75 57-134 10-84 (91)
41 2l22_A Mupirocin didomain acyl 99.3 4.7E-12 1.6E-16 96.7 10.0 79 58-137 127-205 (212)
42 2cq8_A 10-formyltetrahydrofola 99.0 5.6E-10 1.9E-14 78.7 6.5 77 57-136 21-99 (110)
43 3tej_A Enterobactin synthase c 98.9 3.8E-09 1.3E-13 84.3 7.2 75 57-134 7-81 (329)
44 2jgp_A Tyrocidine synthetase 3 98.6 8.8E-08 3E-12 80.2 7.7 75 57-134 6-80 (520)
45 2fq1_A Isochorismatase; ENTB, 98.5 1.6E-07 5.5E-12 74.8 5.4 66 64-132 218-283 (287)
46 2vsq_A Surfactin synthetase su 98.4 8.3E-07 2.8E-11 82.7 8.1 75 57-134 968-1042(1304)
47 4f6l_B AUSA reductase domain p 98.3 9.6E-08 3.3E-12 80.6 0.0 75 57-135 41-115 (508)
48 4dg8_A PA1221; ANL superfamily 98.0 6E-07 2E-11 77.9 0.0 74 58-134 521-595 (620)
49 3rg2_A Enterobactin synthase c 98.0 5.4E-06 1.8E-10 71.3 4.7 71 61-134 545-615 (617)
50 2vz8_A Fatty acid synthase; tr 97.5 1.5E-05 5.3E-10 79.0 0.0 71 63-134 2125-2195(2512)
51 2px6_A Thioesterase domain; th 89.5 0.07 2.4E-06 41.4 0.2 36 92-127 1-36 (316)
52 1dd4_C 50S ribosomal protein L 82.4 1 3.6E-05 25.6 2.6 20 93-112 13-32 (40)
53 3zen_D Fatty acid synthase; tr 78.0 0.44 1.5E-05 48.8 0.0 53 62-115 1795-1848(3089)
54 1zav_U 50S ribosomal protein L 73.1 2.7 9.3E-05 22.4 2.4 16 95-110 15-30 (30)
55 3s93_A Tudor domain-containing 42.1 46 0.0016 22.2 4.8 19 57-75 3-21 (102)
56 2pls_A CBS domain protein; APC 39.7 32 0.0011 21.6 3.6 28 103-130 20-48 (86)
57 1uhr_A SWI/SNF related, matrix 38.5 20 0.00068 23.5 2.4 56 55-110 25-83 (93)
58 3ufe_A Transcriptional antiter 37.2 18 0.00063 23.2 2.1 21 98-118 79-99 (111)
59 1v32_A AT5G08430, hypothetical 37.1 22 0.00077 23.8 2.5 57 56-112 34-93 (101)
60 2oai_A Hemolysin; PFAM03471, x 35.2 31 0.0011 22.2 3.0 28 103-130 29-56 (94)
61 3lae_A UPF0053 protein HI0107; 35.1 40 0.0014 21.0 3.4 25 103-130 20-44 (81)
62 2rk5_A Putative hemolysin; str 33.3 42 0.0014 21.1 3.3 25 103-130 19-43 (87)
63 3b1l_X E3 ubiquitin-protein li 39.6 8.9 0.00031 23.1 0.0 48 58-105 18-73 (76)
64 3llb_A Uncharacterized protein 33.2 43 0.0015 20.9 3.4 25 103-130 20-44 (83)
65 2p3h_A Uncharacterized CBS dom 31.7 44 0.0015 22.1 3.3 25 103-130 23-47 (101)
66 2zjq_5 50S ribosomal protein L 29.6 33 0.0011 23.9 2.5 19 95-113 17-35 (122)
67 2j01_L 50S ribosomal protein L 29.5 34 0.0012 24.0 2.5 19 95-113 17-35 (125)
68 3u5e_m 60S ribosomal protein L 28.5 12 0.00041 25.5 0.0 49 57-105 17-73 (128)
69 2p13_A CBS domain; alpha-beta 28.4 59 0.002 20.5 3.4 27 103-130 26-52 (90)
70 2pli_A Uncharacterized protein 28.1 59 0.002 20.6 3.4 25 103-130 29-53 (91)
71 3ded_A Probable hemolysin; str 27.6 59 0.002 21.7 3.5 30 102-131 45-76 (113)
72 2r2z_A Hemolysin; APC85144, en 27.4 60 0.002 20.5 3.3 25 103-130 27-51 (93)
73 2p4p_A Hypothetical protein HD 26.0 66 0.0023 20.1 3.3 26 103-130 20-46 (86)
74 2ftc_E L12MT, MRP-L12, 39S rib 25.8 44 0.0015 23.7 2.6 19 95-113 15-33 (137)
75 3a9j_A Ubiquitin; protein comp 25.5 39 0.0013 19.7 2.0 37 58-94 18-62 (76)
76 2dzi_A Ubiquitin-like protein 24.9 45 0.0015 19.9 2.2 36 59-94 26-69 (81)
77 2kd0_A LRR repeats and ubiquit 24.7 50 0.0017 20.5 2.5 37 58-94 29-73 (85)
78 3u5c_f 40S ribosomal protein S 24.5 16 0.00054 26.1 0.0 50 57-106 17-74 (152)
79 3rio_A PTSGHI operon antitermi 24.0 43 0.0015 24.1 2.3 21 98-118 147-167 (180)
80 3n3k_B Ubiquitin; hydrolase, p 23.2 55 0.0019 19.7 2.5 39 57-95 20-66 (85)
81 1v31_A Hypothetical protein RA 23.2 23 0.00077 23.2 0.6 56 55-110 25-83 (93)
82 1dd3_A 50S ribosomal protein L 23.2 34 0.0012 24.1 1.5 20 93-112 13-32 (128)
83 2pag_A Hypothetical protein; n 23.1 41 0.0014 23.2 2.0 18 99-116 24-41 (135)
84 2opa_A Probable tautomerase YW 22.6 77 0.0026 17.7 2.9 22 57-78 14-35 (61)
85 1otf_A 4-oxalocrotonate tautom 22.3 78 0.0027 17.7 2.9 22 57-78 14-35 (62)
86 1ndd_A NEDD8, protein (ubiquit 22.0 54 0.0018 19.1 2.2 37 58-94 18-62 (76)
87 3m20_A 4-oxalocrotonate tautom 21.4 1E+02 0.0036 17.7 3.4 21 58-78 14-34 (62)
88 1dtc_A Acetyl-delta-toxin; NMR 21.3 65 0.0022 16.3 1.9 17 121-137 6-22 (26)
89 2hfk_A Pikromycin, type I poly 20.9 4.8 0.00016 30.8 -3.7 42 56-110 23-64 (319)
90 2jve_A PROD1; LY-6, three-fing 20.6 32 0.0011 22.0 0.9 25 111-135 48-72 (91)
91 2bwf_A Ubiquitin-like protein 20.5 59 0.002 19.1 2.1 36 59-94 22-65 (77)
No 1
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=99.81 E-value=5.6e-20 Score=125.11 Aligned_cols=77 Identities=26% Similarity=0.347 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHhh
Q 032464 61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 61 ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
++.++|++++++++++++ .+++++++|. +||||||++++|++.||++|||+||++++.++.||+++++||.++++.|
T Consensus 2 ~i~ekv~~il~e~l~~d~-~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~~~ 79 (87)
T 2kci_A 2 PTLDALTPIFRQVFDDDS-IVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARK 79 (87)
T ss_dssp CSHHHHHHHHHHHTTCSC-CCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCH-HHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 478999999999999988 6999999998 6999999999999999999999999999999999999999999988765
No 2
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=99.80 E-value=1.7e-19 Score=126.08 Aligned_cols=80 Identities=23% Similarity=0.325 Sum_probs=73.5
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccC--CCHHHHHHHHHHH
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNI--TTVQEAADLIEKL 134 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~--~TV~dl~~~I~~~ 134 (140)
+..+|.++|+++|++++++++ +.|+++++|. |||+|||+++||++.+|++||+++|++ ..++ .||+++++||+++
T Consensus 11 ~~~~I~~~V~~ilaE~lev~~-e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~-~e~~~~~TV~d~vdyI~~~ 88 (102)
T 2l9f_A 11 AATGALELVRHLVAERAELPV-EVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAM-PTNFATATVREMAEALEAR 88 (102)
T ss_dssp SSCCHHHHHHHHHHHHTTSCS-SSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSS-CSCCTTCBHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCCH-HHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCcc-HHHHHHccHHHHHHHHHHh
Confidence 346899999999999999999 6999999998 999999999999999999999999887 6667 9999999999999
Q ss_pred HHhhc
Q 032464 135 VEKKA 139 (140)
Q Consensus 135 ~~~k~ 139 (140)
.+.++
T Consensus 89 ~~~~~ 93 (102)
T 2l9f_A 89 EREAP 93 (102)
T ss_dssp HHTCC
T ss_pred hcccc
Confidence 87654
No 3
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=99.78 E-value=8.4e-19 Score=115.74 Aligned_cols=82 Identities=63% Similarity=0.906 Sum_probs=76.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHh
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEK 137 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~ 137 (140)
+++++.++|++++++.+++++..+++++++|.+||+|||++++|++.||++||++++.+++.++.||++++++|.+++++
T Consensus 1 ~~~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~~ 80 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEK 80 (82)
T ss_dssp CCHHHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHhc
Confidence 46789999999999999998723899999999999999999999999999999999999999999999999999999887
Q ss_pred hc
Q 032464 138 KA 139 (140)
Q Consensus 138 k~ 139 (140)
++
T Consensus 81 ~~ 82 (82)
T 2ava_A 81 KA 82 (82)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 4
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=99.78 E-value=6.3e-19 Score=119.67 Aligned_cols=77 Identities=26% Similarity=0.346 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCccc-cCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHhhc
Q 032464 62 TVQKVCEIVRRQLALPAETELTSESKFSA-LGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKKA 139 (140)
Q Consensus 62 i~~~V~~il~~~l~i~~~~eI~~ds~l~d-LGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~k~ 139 (140)
+.++|++|+++.+++++ .+|+++++|.+ +|||||+.++|+..||++|||+++.+++.+++||+++++||.+++++|.
T Consensus 3 tle~l~~I~~e~l~~d~-~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~~k~ 80 (87)
T 2kjs_A 3 TLDALTPIFRQVFDDDS-IVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLARKL 80 (87)
T ss_dssp SHHHHHHHHHHHHTCSS-CCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCc-cccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999998 69999999985 8999999999999999999999999999999999999999999998763
No 5
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=99.77 E-value=1.3e-18 Score=115.43 Aligned_cols=79 Identities=33% Similarity=0.467 Sum_probs=75.3
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ .+++++++| .+||+|||++++++..||++||++++++++.++.||++++++|.++
T Consensus 4 ~m~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 4 SMDNDEIFSKVRSIISEQLDKKE-DEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp CSTHHHHHHHHHHHHHHHHCCCG-GGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCc-ccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 48999999999999999999987 699999999 6999999999999999999999999999999999999999999887
Q ss_pred H
Q 032464 135 V 135 (140)
Q Consensus 135 ~ 135 (140)
+
T Consensus 83 ~ 83 (84)
T 2kwl_A 83 K 83 (84)
T ss_dssp H
T ss_pred c
Confidence 5
No 6
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=99.77 E-value=8e-19 Score=116.03 Aligned_cols=78 Identities=37% Similarity=0.616 Sum_probs=73.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHH
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVE 136 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~ 136 (140)
+++++.++|++++++.+++++ .+++++++|. +||+|||++++|++.||++||++++++++.++.||+++++||.++++
T Consensus 2 ~~~~i~~~l~~ii~~~l~~~~-~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQLSVEE-DKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHHTCCG-GGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHhCcCH-HHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHhc
Confidence 468999999999999999988 6999999995 99999999999999999999999999999999999999999998764
No 7
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=99.77 E-value=1.3e-18 Score=120.79 Aligned_cols=83 Identities=27% Similarity=0.487 Sum_probs=78.4
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 55 SCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 55 ~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.-|.++++.++|+++|++.+++++ .+|+++++|.+||+|||+.+||++.||++|||+||++++.++.||+++++||.++
T Consensus 11 ~~~~~~~i~~~l~~ila~~l~v~~-~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~ 89 (100)
T 1vku_A 11 HHMERKKLIAKFVEIASEKMGKDL-ETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKK 89 (100)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCCCC-CSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHHHHCCCH-HHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 358899999999999999999988 6999999999999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 032464 135 VEKK 138 (140)
Q Consensus 135 ~~~k 138 (140)
++++
T Consensus 90 ~~~~ 93 (100)
T 1vku_A 90 LEEI 93 (100)
T ss_dssp HHHC
T ss_pred hhhh
Confidence 8654
No 8
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=118.53 Aligned_cols=85 Identities=26% Similarity=0.394 Sum_probs=78.7
Q ss_pred ccCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHH
Q 032464 54 VSCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIE 132 (140)
Q Consensus 54 ~~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~ 132 (140)
...|+++++.++|++++++.+++++ .+|+++++|. +||+|||++++|+..||++|||+|+++++.++.||++++++|.
T Consensus 8 m~~m~~~~i~~~l~~~l~~~l~~~~-~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~ 86 (99)
T 2dnw_A 8 MPPLTLEGIQDRVLYVLKLYDKIDP-EKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIA 86 (99)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTSCT-TTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCH-hhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHH
Confidence 3458999999999999999999987 6899999995 9999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 032464 133 KLVEKKA 139 (140)
Q Consensus 133 ~~~~~k~ 139 (140)
++++.++
T Consensus 87 ~~~~~~~ 93 (99)
T 2dnw_A 87 DKKDVYE 93 (99)
T ss_dssp HHCCSCS
T ss_pred HHhcccc
Confidence 9876544
No 9
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=99.76 E-value=5.8e-19 Score=117.64 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=75.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCC----CCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAET----ELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIE 132 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~----eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~ 132 (140)
|+++.+.++|++++++.+++++ . +++++++|.+||+|||++++|+..||++||+++|++++.++.||+++++||.
T Consensus 1 M~~~~~~~~l~~il~~~l~~~~-~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~ 79 (86)
T 1af8_A 1 MATLLTTDDLRRALVECAGETD-GTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLIN 79 (86)
T ss_dssp CCCSSCHHHHHHHHHTTCCCCS-CCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCc-ccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHH
Confidence 5566788999999999999986 4 6899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 032464 133 KLVEKKA 139 (140)
Q Consensus 133 ~~~~~k~ 139 (140)
+++++++
T Consensus 80 ~~~~~~~ 86 (86)
T 1af8_A 80 GALAEAA 86 (86)
T ss_dssp HHHHHHC
T ss_pred HHhhccC
Confidence 9886653
No 10
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=99.76 E-value=3.4e-18 Score=112.42 Aligned_cols=78 Identities=36% Similarity=0.547 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
|+++++.++|++++++.+++++ .+++++++|. +||+|||++++++..||++||++++.+++.++.|+++++++|.+++
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDK-AIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKERQ 80 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCT-TTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHCCCh-hhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 7889999999999999999987 6899999995 9999999999999999999999999999999999999999998763
No 11
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=99.76 E-value=6.8e-19 Score=121.21 Aligned_cols=80 Identities=43% Similarity=0.577 Sum_probs=73.7
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHH
Q 032464 55 SCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEK 133 (140)
Q Consensus 55 ~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~ 133 (140)
..++++++.++|+++|++.+++++ ++|+++++|. +||+|||+.+||+..||++|||+++++++.++.||+++++||.+
T Consensus 16 ~~~t~~~i~~~l~~iia~~l~~~~-~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 94 (97)
T 3ejb_A 16 RGSHMSTIEERVKKIIGEQLGVKQ-EEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING 94 (97)
T ss_dssp --CCCCCHHHHHHHHHHHHSCCCT-TTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCcCH-HHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 357889999999999999999988 6999999995 99999999999999999999999999999999999999999987
Q ss_pred HH
Q 032464 134 LV 135 (140)
Q Consensus 134 ~~ 135 (140)
++
T Consensus 95 ~~ 96 (97)
T 3ejb_A 95 HQ 96 (97)
T ss_dssp C-
T ss_pred hc
Confidence 54
No 12
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=99.76 E-value=8e-19 Score=122.07 Aligned_cols=80 Identities=39% Similarity=0.595 Sum_probs=70.8
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHH
Q 032464 55 SCSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEK 133 (140)
Q Consensus 55 ~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~ 133 (140)
+.|++.++.++|+++|++.+++++ ++|+++++| .|||+|||+.+||+..||++|||+|+++++.++.||++++++|.+
T Consensus 20 ~~m~~mei~~~l~~iiae~l~~~~-~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~ 98 (101)
T 4dxe_H 20 FQSNAMENFDKVKDIIVDRLGVDA-DKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINS 98 (101)
T ss_dssp ----CTTHHHHHHHHHHHTTCCCG-GGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC-
T ss_pred HhcCHHHHHHHHHHHHHHHHCcCh-hhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 358888999999999999999988 699999999 699999999999999999999999999999999999999999986
Q ss_pred HH
Q 032464 134 LV 135 (140)
Q Consensus 134 ~~ 135 (140)
+.
T Consensus 99 ~~ 100 (101)
T 4dxe_H 99 LE 100 (101)
T ss_dssp --
T ss_pred cc
Confidence 53
No 13
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=99.76 E-value=4.6e-19 Score=118.87 Aligned_cols=81 Identities=27% Similarity=0.389 Sum_probs=75.1
Q ss_pred CCChHHHHHHHHHHHHHHh---CCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQL---ALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLI 131 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l---~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I 131 (140)
.|+++++.++|+++|++.+ ++++ .+++++++| .+||+|||++++|++.||++|||+++++++.++.||+++++||
T Consensus 3 ~m~~~~i~~~v~~~i~~~l~~~~~~~-~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i 81 (88)
T 2l4b_A 3 SMVSEEIKAQVMESVIGCLKLNDEQK-QILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYI 81 (88)
T ss_dssp SSSCHHHHHHHHHHHHHHHTCCHHHH-HSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhCCCCH-hhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHH
Confidence 4889999999999999999 7766 589999999 5999999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 032464 132 EKLVEK 137 (140)
Q Consensus 132 ~~~~~~ 137 (140)
.+++++
T Consensus 82 ~~~~~~ 87 (88)
T 2l4b_A 82 ASKSSD 87 (88)
T ss_dssp HHHSSC
T ss_pred HHhhcc
Confidence 987643
No 14
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=99.75 E-value=4.2e-18 Score=111.22 Aligned_cols=78 Identities=37% Similarity=0.661 Sum_probs=74.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
|+++++.++|++++++.+++++ .+++++++| .++|+|||++++++..||++||++++.+++.++.|+++++++|.+++
T Consensus 1 M~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKLQVEP-EKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCG-GGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCH-HHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHHc
Confidence 7889999999999999999987 689999999 69999999999999999999999999999999999999999998875
No 15
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=99.74 E-value=5.2e-18 Score=118.98 Aligned_cols=81 Identities=28% Similarity=0.366 Sum_probs=75.6
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc------cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKF------SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l------~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
|+.+++.++|+++|++.++ ++ .+|+++++| .|||||||++++|++.||++|||+|+++++.++.||+++++|
T Consensus 15 ~~~~~i~~~i~~il~e~l~-~~-~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~ 92 (107)
T 3ce7_A 15 TDINAVTNYIVGMCQKFLQ-KG-EKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADF 92 (107)
T ss_dssp TCHHHHHHHHHHHHHTTBC-TT-CCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhC-Cc-cccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHH
Confidence 6899999999999999999 66 699999999 589999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 032464 131 IEKLVEKKA 139 (140)
Q Consensus 131 I~~~~~~k~ 139 (140)
|.+++++.+
T Consensus 93 i~~~~~~~~ 101 (107)
T 3ce7_A 93 VVSERAKAG 101 (107)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHHHH
Confidence 999887543
No 16
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=99.74 E-value=1.1e-18 Score=114.68 Aligned_cols=78 Identities=33% Similarity=0.609 Sum_probs=70.6
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ .+++++++| .+||+|||++++++..||++||++++.+++.++.|+++++++|.++
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~-~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDE-ADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCS-SCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHHCCCH-HhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHhh
Confidence 58899999999999999999987 699999999 6999999999999999999999999999999999999999998764
No 17
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=99.74 E-value=6.8e-18 Score=110.86 Aligned_cols=78 Identities=28% Similarity=0.500 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
|+++++.++|++++++.+++++ .+++++++|. ++|+|||++++++..||++||++++.+++.++.|+++++++|.+++
T Consensus 3 m~~~~i~~~l~~~i~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2cnr_A 3 ATQEEIVAGLAEIVNEIAGIPV-EDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQ 81 (82)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCT-TTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHHSB
T ss_pred CCHHHHHHHHHHHHHHHhCCCH-HHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHHc
Confidence 8899999999999999999987 6899999995 9999999999999999999999999999999999999999998753
No 18
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=99.74 E-value=4.2e-18 Score=119.24 Aligned_cols=86 Identities=23% Similarity=0.336 Sum_probs=70.3
Q ss_pred ccccccCCChHHHHHHHHHHHHHHhCCC--CCCCCCCCCCcc-ccCC-ChHHHHHHHHHHHHHhCCCcCccc--cccCCC
Q 032464 50 NRFCVSCSAKPETVQKVCEIVRRQLALP--AETELTSESKFS-ALGA-DSLDTVEIVMSLEEEFGIGVEEEN--SQNITT 123 (140)
Q Consensus 50 ~r~~~~~m~~~ei~~~V~~il~~~l~i~--~~~eI~~ds~l~-dLGl-DSLd~vELv~~LEeeFgI~i~~~~--l~~~~T 123 (140)
.|-++++..+.++.++|+++|++.++++ + .+|+++++|. |||+ |||++++|++.||++|||+|++++ ..++.|
T Consensus 13 ~~~~~~~~~~m~i~~~i~~il~e~l~~~~~~-~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~T 91 (105)
T 2lki_A 13 GRENLYFQGHMQHLEAVRNILGDVLNLGERK-HTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFET 91 (105)
T ss_dssp ----------CCTHHHHHHHHHHHTTCTTGG-GTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSB
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHhCCCccc-ccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCC
Confidence 4556666667789999999999999988 5 6899999998 7998 999999999999999999999999 458999
Q ss_pred HHHHHHHHHHHHH
Q 032464 124 VQEAADLIEKLVE 136 (140)
Q Consensus 124 V~dl~~~I~~~~~ 136 (140)
|+++++||.++++
T Consensus 92 v~~l~~~I~~~~~ 104 (105)
T 2lki_A 92 LGSLALFVEHKLS 104 (105)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998753
No 19
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=99.73 E-value=4.4e-18 Score=112.82 Aligned_cols=76 Identities=17% Similarity=0.251 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccC-CChHHHHHHHHHHHHHhCCCcCccccc--cCCCHHHHHHHHHHH
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALG-ADSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLIEKL 134 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLG-lDSLd~vELv~~LEeeFgI~i~~~~l~--~~~TV~dl~~~I~~~ 134 (140)
+++++.++|+++|++.++.++ .+++++++|.++| +|||++++|++.||++|||+||++++. ++.||+++++||.++
T Consensus 1 ~~~~i~~~i~~il~~~~~~~~-~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~~ 79 (80)
T 1dv5_A 1 ADEAIKNGVLDILADLTGSDD-VKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQA 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHTSSS-TTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhCCCc-ccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHHc
Confidence 357899999999999999886 5899999999888 999999999999999999999999986 999999999999864
No 20
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=99.73 E-value=8.6e-18 Score=111.12 Aligned_cols=78 Identities=40% Similarity=0.632 Sum_probs=73.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.+++++.++|++++++.+++++ .+++++++| .+||+|||+++++++.||++||++++++++.++.||++++++|.+++
T Consensus 3 ~~~~~i~~~l~~ii~~~l~~~~-~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 81 (82)
T 2qnw_A 3 SDDRPLLERVKDVVADQLGVDR-ARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKAK 81 (82)
T ss_dssp CCSHHHHHHHHHHHHHHHCCCG-GGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHCCCH-hhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHhc
Confidence 4678999999999999999987 699999999 59999999999999999999999999999999999999999998764
No 21
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=99.73 E-value=1.2e-17 Score=117.79 Aligned_cols=82 Identities=28% Similarity=0.492 Sum_probs=77.2
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.|+++++.++|++++++.+++++ .+|+++++|. +||+|||++++|+..||++||++|+++++.++.||++++++|.++
T Consensus 2 ~m~~~~i~~~l~~il~~~l~~~~-~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~ 80 (115)
T 1klp_A 2 PVTQEEIIAGIAEIIEEVTGIEP-SEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKL 80 (115)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCCT-TTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcCH-HhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHH
Confidence 38899999999999999999987 6899999995 999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q 032464 135 VEKK 138 (140)
Q Consensus 135 ~~~k 138 (140)
+.++
T Consensus 81 ~~~~ 84 (115)
T 1klp_A 81 EEEN 84 (115)
T ss_dssp HSSC
T ss_pred Hccc
Confidence 8654
No 22
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=99.73 E-value=1.1e-17 Score=115.75 Aligned_cols=79 Identities=33% Similarity=0.514 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccc------cccCCC-----HHHHH
Q 032464 61 ETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEEN------SQNITT-----VQEAA 128 (140)
Q Consensus 61 ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~------l~~~~T-----V~dl~ 128 (140)
++.++|+++|++.+++++ .+|+++++|. +||+|||++++|++.||++|||+|++++ +.++.| |++++
T Consensus 3 ~i~~~v~~ii~~~l~~~~-~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~ 81 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPR-ETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLA 81 (101)
T ss_dssp CHHHHHHHHHHHHHCCCG-GGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHH
T ss_pred HHHHHHHHHHHHHhCCCH-hhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHH
Confidence 688999999999999987 6999999995 9999999999999999999999999987 578889 99999
Q ss_pred HHHHHHHHhhcC
Q 032464 129 DLIEKLVEKKAA 140 (140)
Q Consensus 129 ~~I~~~~~~k~a 140 (140)
+||.+++++++|
T Consensus 82 ~~i~~~~~~~~~ 93 (101)
T 2kw2_A 82 ARIDELVAAKGA 93 (101)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHhccchh
Confidence 999999987764
No 23
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=99.72 E-value=1e-17 Score=116.95 Aligned_cols=83 Identities=18% Similarity=0.342 Sum_probs=70.7
Q ss_pred CCChHHHHHHHHHHHHHHhCCC--CCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccc--cCCCHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALP--AETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLI 131 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~--~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~--~~~TV~dl~~~I 131 (140)
.++++++.++|+++|++.++++ . .+|+++++|.|||+|||++++|++.||++|||+||++++. ++.|+++++++|
T Consensus 17 ~~~~~~i~~~i~~il~~~l~~~v~~-~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v 95 (105)
T 2jq4_A 17 LYFQGHMNATIREILAKFGQLPTPV-DTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTV 95 (105)
T ss_dssp ------CHHHHHHHHHHTSCCSSCG-GGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCc-ccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHH
Confidence 4778999999999999988653 5 6899999999999999999999999999999999999886 899999999999
Q ss_pred HHHHHhhc
Q 032464 132 EKLVEKKA 139 (140)
Q Consensus 132 ~~~~~~k~ 139 (140)
..+.+.++
T Consensus 96 ~~~~~~~~ 103 (105)
T 2jq4_A 96 KLILDGKE 103 (105)
T ss_dssp HHHHHTGG
T ss_pred HHHhcccc
Confidence 99887665
No 24
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=99.71 E-value=4.2e-18 Score=120.95 Aligned_cols=82 Identities=23% Similarity=0.356 Sum_probs=68.8
Q ss_pred cccccCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHH
Q 032464 51 RFCVSCSAKPETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAAD 129 (140)
Q Consensus 51 r~~~~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~ 129 (140)
+|....| ++++.++|+++|++.++ |+++++|. |||+|||+++||++.||++|||+|+++++.++.||+++++
T Consensus 21 ~~~~~~M-~~ei~~~v~~il~e~l~------I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~ 93 (113)
T 2cgq_A 21 LYFQGAM-EEAINATIQRILRTDRG------ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYT 93 (113)
T ss_dssp -----CH-HHHHHHHHHHHHTCCSC------CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHH
T ss_pred HHhcccc-HHHHHHHHHHHHHHHhC------CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHH
Confidence 4444467 88999999999999876 78999995 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc
Q 032464 130 LIEKLVEKKA 139 (140)
Q Consensus 130 ~I~~~~~~k~ 139 (140)
+|.+++++++
T Consensus 94 ~I~~~l~~~a 103 (113)
T 2cgq_A 94 SVAVWFPETA 103 (113)
T ss_dssp HHHTTC----
T ss_pred HHHHHHhccc
Confidence 9998876654
No 25
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=99.54 E-value=7.7e-19 Score=122.48 Aligned_cols=86 Identities=22% Similarity=0.322 Sum_probs=77.2
Q ss_pred ccccccC---CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHH
Q 032464 50 NRFCVSC---SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQE 126 (140)
Q Consensus 50 ~r~~~~~---m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~d 126 (140)
.|+.+++ |+++ +.++|+++|++.+++++ .+|+++++|.+||+|||+++||++.||++|||+|+++++.++.||++
T Consensus 13 ~~~~~~~~~~M~~e-i~~~l~~ila~~l~i~~-~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~ 90 (103)
T 2lte_A 13 GRENLYFQGHMPND-MEDHLLTVLSVASGVPK-EEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDE 90 (103)
Confidence 4555444 4444 99999999999999987 68999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 032464 127 AADLIEKLVEK 137 (140)
Q Consensus 127 l~~~I~~~~~~ 137 (140)
++++|.+++++
T Consensus 91 l~~~I~~~~~~ 101 (103)
T 2lte_A 91 LFQLVEKHRAA 101 (103)
Confidence 99999998754
No 26
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.68 E-value=7.9e-17 Score=106.94 Aligned_cols=75 Identities=24% Similarity=0.372 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHhCCC--CCCCCCCCCCcc-ccCC-ChHHHHHHHHHHHHHhCCCcCccccc--cCCCHHHHHHHHHHH
Q 032464 61 ETVQKVCEIVRRQLALP--AETELTSESKFS-ALGA-DSLDTVEIVMSLEEEFGIGVEEENSQ--NITTVQEAADLIEKL 134 (140)
Q Consensus 61 ei~~~V~~il~~~l~i~--~~~eI~~ds~l~-dLGl-DSLd~vELv~~LEeeFgI~i~~~~l~--~~~TV~dl~~~I~~~ 134 (140)
++.++|++++++.++++ + .+++++++|. |||+ |||+++++++.||++|||+++++++. ++.||+++++||.++
T Consensus 2 ~i~~~l~~il~~~l~~~~~~-~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~ 80 (83)
T 2amw_A 2 QHLEAVRNILGDVLNLGERK-HTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHK 80 (83)
T ss_dssp CTHHHHHHHHHHHTTCGGGG-GSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCcc-ccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHH
Confidence 36789999999999988 5 5899999998 8998 99999999999999999999999965 499999999999987
Q ss_pred HH
Q 032464 135 VE 136 (140)
Q Consensus 135 ~~ 136 (140)
++
T Consensus 81 ~~ 82 (83)
T 2amw_A 81 LS 82 (83)
T ss_dssp HC
T ss_pred hc
Confidence 63
No 27
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=99.68 E-value=4.7e-17 Score=106.18 Aligned_cols=75 Identities=43% Similarity=0.619 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 60 PETVQKVCEIVRRQLALPAETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 60 ~ei~~~V~~il~~~l~i~~~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+++.++|++++++.+++++ .+++++++|. +||+|||+.++++..||++||++++.+++.++.|+++++++|.++.
T Consensus 2 ~~i~~~l~~~~~~~l~~~~-~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 77 (78)
T 1l0i_A 2 STIEERVKKIIGEQLGVKQ-EEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CCHHHHHHHHHHHHHTCCG-GGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHhCCCH-HHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3688999999999999987 6899999995 9999999999999999999999999999999999999999998753
No 28
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=99.68 E-value=8.8e-17 Score=110.00 Aligned_cols=78 Identities=18% Similarity=0.305 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhCCCCC---CCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHhh
Q 032464 62 TVQKVCEIVRRQLALPAE---TELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 62 i~~~V~~il~~~l~i~~~---~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
+.++|+++|++.++.+.. ++++++++|.+||+|||+.++|+..||++|||+|+++++.++.||++++++|.+++..+
T Consensus 5 t~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~~ 84 (95)
T 1nq4_A 5 TLSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLTGA 84 (95)
T ss_dssp CHHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 456788888888887641 27999999999999999999999999999999999999999999999999999887665
Q ss_pred c
Q 032464 139 A 139 (140)
Q Consensus 139 ~ 139 (140)
+
T Consensus 85 ~ 85 (95)
T 1nq4_A 85 S 85 (95)
T ss_dssp S
T ss_pred C
Confidence 4
No 29
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=99.65 E-value=1.6e-17 Score=109.86 Aligned_cols=76 Identities=22% Similarity=0.349 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC--CCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 60 PETVQKVCEIVRRQLALPAETELT--SESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 60 ~ei~~~V~~il~~~l~i~~~~eI~--~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+.+.++|++++++.+++++..+++ ++++|.+||+|||+.++|+..||++||+++|++++.++.|+++++++|.+++
T Consensus 3 ~~~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 80 (83)
T 1or5_A 3 ALTVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 80 (83)
T ss_dssp CSCHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHHHh
Confidence 457889999999999998722798 9999999999999999999999999999999999999999999999997654
No 30
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=99.65 E-value=3.3e-16 Score=101.25 Aligned_cols=73 Identities=41% Similarity=0.698 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 62 TVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 62 i~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+.++|++++++.+++++ .+++++++| .++|+|||++++++..+|++||++++.+++.++.|+++++++|.++.
T Consensus 2 i~~~l~~~~~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~~ 75 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEK-EKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKV 75 (77)
T ss_dssp HHHHHHHHHHHHHCCCG-GGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCh-hhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 67899999999999987 689999999 79999999999999999999999999999999999999999998865
No 31
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=99.62 E-value=1.8e-17 Score=112.54 Aligned_cols=80 Identities=19% Similarity=0.433 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHhCCCCC-------CCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcC---ccccccCCCHHHHHH
Q 032464 60 PETVQKVCEIVRRQLALPAE-------TELTSESKFSALGADSLDTVEIVMSLEEEFGIGVE---EENSQNITTVQEAAD 129 (140)
Q Consensus 60 ~ei~~~V~~il~~~l~i~~~-------~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~---~~~l~~~~TV~dl~~ 129 (140)
+++.++|+++|++.++.+.+ ++++++++|.+||+|||++++|++.||++|||+++ ++++.++.||+++++
T Consensus 3 ~~i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~ 82 (92)
T 1fh1_A 3 DQLTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVE 82 (92)
T ss_dssp --CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTH
T ss_pred hHHHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHH
Confidence 46788999999999885431 48999999999999999999999999999999999 678899999999999
Q ss_pred HHHHHHHhhc
Q 032464 130 LIEKLVEKKA 139 (140)
Q Consensus 130 ~I~~~~~~k~ 139 (140)
||.+++++++
T Consensus 83 ~i~~~~~~~a 92 (92)
T 1fh1_A 83 AVRGLLTKEV 92 (92)
T ss_dssp HHHC------
T ss_pred HHHHHhhccC
Confidence 9998887653
No 32
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=99.61 E-value=4.2e-17 Score=106.48 Aligned_cols=75 Identities=41% Similarity=0.679 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCc-cccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 60 PETVQKVCEIVRRQLALPAETELTSESKF-SALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 60 ~ei~~~V~~il~~~l~i~~~~eI~~ds~l-~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+++.++|++++++.+++++ .+++++++| .+||+|||+.++++..||++||++++.+++.++.|+++++++|.+++
T Consensus 3 ~~i~~~l~~~~~~~l~~~~-~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (79)
T 2l3v_A 3 SDTAERVKKIVVEHLGVDA-DKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDKAS 78 (79)
T ss_dssp THHHHHHHHHHHHHTCCCS-TTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCH-hhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHhc
Confidence 3799999999999999987 689999999 69999999999999999999999999999999999999999998754
No 33
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=99.57 E-value=1.2e-14 Score=97.94 Aligned_cols=83 Identities=18% Similarity=0.295 Sum_probs=77.5
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.++..++.+.|++++++.++++. .+++++.+|.+||+|||..+++...|+++||++++..++.+..|+++++++|.+++
T Consensus 16 ~~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~ 94 (99)
T 2liu_A 16 QVNLSEIKQVLKQQLAEALYTEE-SEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQIL 94 (99)
T ss_dssp CCCHHHHHHHHHHHHHHHTTSCG-GGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 46789999999999999999987 68999999999999999999999999999999999999999999999999999988
Q ss_pred Hhhc
Q 032464 136 EKKA 139 (140)
Q Consensus 136 ~~k~ 139 (140)
..++
T Consensus 95 ~~~~ 98 (99)
T 2liu_A 95 SSQG 98 (99)
T ss_dssp HHHT
T ss_pred hccC
Confidence 7654
No 34
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.56 E-value=1.8e-14 Score=94.99 Aligned_cols=79 Identities=15% Similarity=0.175 Sum_probs=74.1
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
.++..++.+.|++++++.+++++ ..++++.+|.++|+|||..+++...|+++||++++..++.+..|+++++++|.+.+
T Consensus 9 ~~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~~ 87 (88)
T 2afd_A 9 PASVEDIQSWLIDQFAQQLDVDP-DDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp CSSHHHHHHHHHHHHHHHHTSCG-GGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 36788999999999999999986 68999999999999999999999999999999999999999999999999998764
No 35
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.52 E-value=3.2e-14 Score=94.62 Aligned_cols=76 Identities=25% Similarity=0.394 Sum_probs=71.4
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCc--cccccCCCHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEE--ENSQNITTVQEAADLIEK 133 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~--~~l~~~~TV~dl~~~I~~ 133 (140)
....++.+.|++++++.+++++ .+++++++|.+||+|||..++++..|+++||++++. .++....|+++++++|.+
T Consensus 7 ~~~~~~~~~l~~~~~~~l~~~~-~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 7 GVSNEKLDAVMRVVSEESGIAL-EELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHCCCG-GGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHHHCcCH-HHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 4567899999999999999987 689999999999999999999999999999999999 899999999999999975
No 36
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=99.46 E-value=1e-13 Score=94.86 Aligned_cols=70 Identities=23% Similarity=0.372 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 64 QKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 64 ~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
+.|++.|+++++++..++|+++.+|.+||+|||+.|||.+.||++||++++..++... |++++++++...
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~~-Ti~~La~~v~~~ 78 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQL-TLRKLQELSSKA 78 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHTC-BHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHhC-CHHHHHHHHhcc
Confidence 4688999999999643589999999999999999999999999999999999998775 999999998753
No 37
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=99.45 E-value=1.2e-13 Score=92.86 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 59 KPETVQKVCEIVRRQLA-LPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 59 ~~ei~~~V~~il~~~l~-i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
...+.+.|++++++.++ .++ ..++++.+|.++|+|||..+++...|+++||++++..++.+..|+++++++|.+.+
T Consensus 18 ~~~~~~~l~~~~~~~l~~~~~-~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~l 94 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDP-KAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCG-GGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCh-hhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHHc
Confidence 35788889999999999 555 68999999999999999999999999999999999999999999999999998765
No 38
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.42 E-value=1.8e-13 Score=104.62 Aligned_cols=82 Identities=12% Similarity=0.196 Sum_probs=74.8
Q ss_pred ccCCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHH
Q 032464 54 VSCSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEK 133 (140)
Q Consensus 54 ~~~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~ 133 (140)
...++++++.+.|++++++.+++++ ++|+++.+|.+||+|||+.++|+..|+++||++++...+.+..|+++++++|.+
T Consensus 19 ~~~~~~~~i~~~l~~~~a~~l~~~~-~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~ 97 (212)
T 2l22_A 19 SHMVADDECAQFLRQSLAAMLYCEP-GQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGT 97 (212)
T ss_dssp ---CCTTHHHHHHHHHHHHHTTCCT-TSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHCcCH-HHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 3457889999999999999999987 689999999999999999999999999999999999999999999999999987
Q ss_pred HHH
Q 032464 134 LVE 136 (140)
Q Consensus 134 ~~~ 136 (140)
...
T Consensus 98 ~~~ 100 (212)
T 2l22_A 98 QLQ 100 (212)
T ss_dssp TSC
T ss_pred hcc
Confidence 653
No 39
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.39 E-value=8e-13 Score=89.34 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHhh
Q 032464 59 KPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEKK 138 (140)
Q Consensus 59 ~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~k 138 (140)
..++.+.|++++++.|+++ .++++++|+++|.|||..++++..|+++||++++..++....|+++++++|.+.....
T Consensus 14 ~~~~e~~l~~i~~~vL~~~---~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~~~~ 90 (93)
T 4i4d_A 14 RRALERDIAAIWAETLGRD---SVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATLTGE 90 (93)
T ss_dssp HHHHHHHHHHHHHHHHTCS---CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHTC--
T ss_pred CCHHHHHHHHHHHHHhCCC---CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHcccc
Confidence 5688999999999999983 5999999999999999999999999999999999999999999999999999876543
No 40
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.35 E-value=1.7e-12 Score=87.66 Aligned_cols=75 Identities=16% Similarity=0.254 Sum_probs=68.8
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
....++.++|.+++++.++++ .++++++|+++|.|||..++++..|+++||++++..++....|++++++++.+.
T Consensus 10 ~p~~~~e~~l~~i~~~vL~~~---~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 10 APTNAVESKLAEIWERVLGVS---GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS---SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 455788999999999999984 589999999999999999999999999999999999999999999999999754
No 41
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=99.35 E-value=4.7e-12 Score=96.74 Aligned_cols=79 Identities=19% Similarity=0.274 Sum_probs=73.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHHHh
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLVEK 137 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~~~ 137 (140)
.+.++.+.|++++++.+++++ ++++++.+|.+||+|||..++|+..|+++||++++..++.+..|+++++++|.+.++.
T Consensus 127 ~~~~i~~~l~~~~~~~l~~~~-~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~~~ 205 (212)
T 2l22_A 127 QRESIQDYLKQSLGELLFLDP-GQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRVQL 205 (212)
T ss_dssp HHHHHHHHHHHHHHHHHSSCS-SSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHCCCh-hhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHhcc
Confidence 457899999999999999987 6899999999999999999999999999999999999999999999999999887653
No 42
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=5.6e-10 Score=78.70 Aligned_cols=77 Identities=23% Similarity=0.311 Sum_probs=69.9
Q ss_pred CChHHHHHHHHHHHHHHhC-CCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhC-CCcCccccccCCCHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLA-LPAETELTSESKFSALGADSLDTVEIVMSLEEEFG-IGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~-i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFg-I~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
..+.++..+|.+|+.++|+ .+ .|.++++|++||-|||.++.|+..|+++|| ++++..++....|+++++.+|.+.
T Consensus 21 ~~~~~~E~~La~iW~~vL~~~~---~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 21 EAELVTAEAVRSVWQRILPKVL---EVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp TTHHHHHHHHHHHHHHHCSSCS---CCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhCCCC---CCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 3456799999999999998 43 589999999999999999999999999999 999999999999999999999876
Q ss_pred HH
Q 032464 135 VE 136 (140)
Q Consensus 135 ~~ 136 (140)
+.
T Consensus 98 ~~ 99 (110)
T 2cq8_A 98 LR 99 (110)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 43
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.87 E-value=3.8e-09 Score=84.32 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=68.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
....++.+.|++++++.|+++. |+.+++|++||.|||..++++..|+++||++++..++.+..|+++++++|.+.
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~~---i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCDV---QDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC-C---CSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHhCCCC---CCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhh
Confidence 4456788999999999999853 88999999999999999999999999999999999999999999999999754
No 44
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.60 E-value=8.8e-08 Score=80.21 Aligned_cols=75 Identities=21% Similarity=0.360 Sum_probs=69.1
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
....++..+|.+++++.|+++ +|..+.+|.+||.|||..++++..++++||++++..++....|++++++++...
T Consensus 6 ~p~~~~e~~l~~iw~~vL~~~---~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~ 80 (520)
T 2jgp_A 6 APRSVWEARLAQVWEQVLNVP---QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEET 80 (520)
T ss_dssp CCCSHHHHHHHHHHHHHHTCS---CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhh
Confidence 456788999999999999985 588999999999999999999999999999999999999999999999998753
No 45
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=98.46 E-value=1.6e-07 Score=74.78 Aligned_cols=66 Identities=12% Similarity=0.096 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHH
Q 032464 64 QKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIE 132 (140)
Q Consensus 64 ~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~ 132 (140)
+++++.+++.+ +++ +++.++.+|.+||+||+.++.|+..+++. |++++..++.+..|++++++++.
T Consensus 218 dwlr~~va~~L-~~~-~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 218 AALREVILPLL-DES-DEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHGGGC-CCS-SCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCH-hhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 45888888888 777 58999999999999999999999999998 99999999999999999999997
No 46
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.35 E-value=8.3e-07 Score=82.74 Aligned_cols=75 Identities=16% Similarity=0.262 Sum_probs=69.3
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
....++.+.|.+++++.|+++ .|..+++|++||.|||..++|+..|+++||++++..++....|+.+++++|...
T Consensus 968 ~p~~~~e~~l~~~~~~vL~~~---~i~~~~~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~ 1042 (1304)
T 2vsq_A 968 GPRNEMEETIAQIWSEVLGRK---QIGIHDDFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNG 1042 (1304)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS---CCCTTCCTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHcCCC---ccCCCCCHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhc
Confidence 456788999999999999974 588999999999999999999999999999999999999999999999999753
No 47
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=98.28 E-value=9.6e-08 Score=80.59 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
....++...|.+++++.|+++ .|..+++|++||.|||..++|+..|++ ||++++..++....|+.+++++|.+..
T Consensus 41 ~p~~~~e~~l~~~w~~~l~~~---~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 41 EPSNEIEQTFVDVFGEVLKQN---DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 456788999999999999985 588999999999999999999999986 999999999999999999999997654
No 48
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=98.04 E-value=6e-07 Score=77.92 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHH-HhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 58 AKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEE-EFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEe-eFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
...++...+.+++++.|+++ .+..+++|++||.|||..++|+..|++ .||++++..++.+..|+.+++++|.+.
T Consensus 521 ~~~~~e~~l~~iw~~vL~~~---~~~~~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~ 595 (620)
T 4dg8_A 521 ALDPDQRGCAQLWSELLGCE---VGAADQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSH 595 (620)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCCCCCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhc
Confidence 34567788999999999984 477899999999999999999999999 899999999999999999999999764
No 49
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=97.97 E-value=5.4e-06 Score=71.33 Aligned_cols=71 Identities=11% Similarity=0.101 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 61 ETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 61 ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
...+.+.+++.+.++.. ..+..+++|++||.|||..++|+..|++ ++++++..++.+..|+.+++++|.+.
T Consensus 545 ~~~~~l~~~~~~~l~~~--~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~~ 615 (617)
T 3rg2_A 545 ASKAALREVILPLLDES--DEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSRE 615 (617)
T ss_dssp CSHHHHHHHHGGGSCTT--CCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC-
T ss_pred ccHHHHHHHHHHHhccC--CCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHhh
Confidence 34567888888888743 3688899999999999999999999987 78999999999999999999998754
No 50
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.48 E-value=1.5e-05 Score=79.03 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHHHHHHHHH
Q 032464 63 VQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEAADLIEKL 134 (140)
Q Consensus 63 ~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl~~~I~~~ 134 (140)
.+.+.+++++.|+++..+.|+++.+|.+||+|||..+||...|+++||++++..++.. .|+..+++++...
T Consensus 2125 ~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2125 QKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 4568899999999874357999999999999999999999999999999999988866 6888888877644
No 51
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=89.51 E-value=0.07 Score=41.39 Aligned_cols=36 Identities=6% Similarity=-0.168 Sum_probs=7.7
Q ss_pred CCChHHHHHHHHHHHHHhCCCcCccccccCCCHHHH
Q 032464 92 GADSLDTVEIVMSLEEEFGIGVEEENSQNITTVQEA 127 (140)
Q Consensus 92 GlDSLd~vELv~~LEeeFgI~i~~~~l~~~~TV~dl 127 (140)
|-|||..++++..|+++||++++..++.+..|+..+
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l 36 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTL 36 (316)
T ss_dssp -------------------------CCCCCTTSCSE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCee
Confidence 789999999999999999999999988777776544
No 52
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=82.45 E-value=1 Score=25.61 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=17.0
Q ss_pred CChHHHHHHHHHHHHHhCCC
Q 032464 93 ADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 93 lDSLd~vELv~~LEeeFgI~ 112 (140)
+.=+...||+-.+|++|||.
T Consensus 13 lTvlE~~eLvk~leekfGVs 32 (40)
T 1dd4_C 13 LTVSELAELVKKLEDKFGVT 32 (40)
T ss_dssp SCHHHHHHHHHHHHHHTCCC
T ss_pred CcHHHHHHHHHHHHHHHCCC
Confidence 33477899999999999997
No 53
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=77.98 E-value=0.44 Score=48.79 Aligned_cols=53 Identities=8% Similarity=0.237 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCcccc-CCChHHHHHHHHHHHHHhCCCcCc
Q 032464 62 TVQKVCEIVRRQLALPAETELTSESKFSAL-GADSLDTVEIVMSLEEEFGIGVEE 115 (140)
Q Consensus 62 i~~~V~~il~~~l~i~~~~eI~~ds~l~dL-GlDSLd~vELv~~LEeeFgI~i~~ 115 (140)
..+.|+.+++..++..+ ++|.++..+.+| |.+|...-||++.|+.|||..+|+
T Consensus 1795 a~~~~~~liA~~~k~~~-~~i~~~~~i~~L~gg~St~~nell~dl~~efg~~~p~ 1848 (3089)
T 3zen_D 1795 AADATVALIALSAKMRI-DQIEALDSIESITDGASSRRNQLLVDLGSELNLGAID 1848 (3089)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCh-hHCCccccHHHHhCCchHHHHHHHHHHHHHhCCCCCC
Confidence 46668889999999888 699999999988 999999999999999999997654
No 54
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=73.09 E-value=2.7 Score=22.36 Aligned_cols=16 Identities=38% Similarity=0.667 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHhC
Q 032464 95 SLDTVEIVMSLEEEFG 110 (140)
Q Consensus 95 SLd~vELv~~LEeeFg 110 (140)
=+.+.||+-.+|++||
T Consensus 15 vlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 15 VSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 3677899999999998
No 55
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=42.15 E-value=46 Score=22.19 Aligned_cols=19 Identities=16% Similarity=0.137 Sum_probs=16.0
Q ss_pred CChHHHHHHHHHHHHHHhC
Q 032464 57 SAKPETVQKVCEIVRRQLA 75 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~ 75 (140)
|+++++.++|+.+|...+-
T Consensus 3 ~~~~~~l~~vkk~irslLi 21 (102)
T 3s93_A 3 SEQERIQECLRKEIRSLLI 21 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhe
Confidence 5678999999999998874
No 56
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=39.72 E-value=32 Score=21.58 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=19.3
Q ss_pred HHHHHHhCCC-cCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIG-VEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~-i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++ +|+++..++.|++.++-.
T Consensus 20 ~dl~~~l~~~~l~~~~~~~~~Tl~G~i~~ 48 (86)
T 2pls_A 20 PELKDTLGLRAVPEEEKGVYHTLSGMIMW 48 (86)
T ss_dssp HHHHHHHTCSCCTTTTSCSCCBHHHHHHH
T ss_pred HHHHHHhCCCcCCCccCCCcccHHHHHHH
Confidence 4568889998 886322356798887643
No 57
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=38.55 E-value=20 Score=23.50 Aligned_cols=56 Identities=9% Similarity=0.142 Sum_probs=44.2
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCC--CCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhC
Q 032464 55 SCSAKPETVQKVCEIVRRQLALPA--ETELTSESKFS-ALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 55 ~~m~~~ei~~~V~~il~~~l~i~~--~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFg 110 (140)
..+++.++...|.+.|++.-=.++ ...|.-|..|. =+|-|.+.+.+|...|...|-
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1uhr_A 25 HTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLM 83 (93)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEE
T ss_pred CccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 347899999999999998732232 13688899998 579999999999998888764
No 58
>3ufe_A Transcriptional antiterminator (BGLG family); extended helix bundle, arcimboldo; 1.50A {Bacillus subtilis} PDB: 3gwh_A
Probab=37.22 E-value=18 Score=23.21 Aligned_cols=21 Identities=14% Similarity=0.253 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhCCCcCcccc
Q 032464 98 TVEIVMSLEEEFGIGVEEENS 118 (140)
Q Consensus 98 ~vELv~~LEeeFgI~i~~~~l 118 (140)
+.++...||+.||+++|+++.
T Consensus 79 a~~i~~~ie~~~~i~i~~~Ei 99 (111)
T 3ufe_A 79 AWKLIKILQQTLKKPVHEAEA 99 (111)
T ss_dssp HHHHHHHHHHHHCSCCCTHHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 456788899999999999875
No 59
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=37.06 E-value=22 Score=23.79 Aligned_cols=57 Identities=7% Similarity=0.229 Sum_probs=46.2
Q ss_pred CCChHHHHHHHHHHHHHHhCCCC--CCCCCCCCCcc-ccCCChHHHHHHHHHHHHHhCCC
Q 032464 56 CSAKPETVQKVCEIVRRQLALPA--ETELTSESKFS-ALGADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~--~~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFgI~ 112 (140)
.+++.++...|.+.|++.-=-++ ...|..|..|. =+|-|.+.+.+|-..|...|--.
T Consensus 34 ~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~klL~~Hl~~~ 93 (101)
T 1v32_A 34 MISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKEN 93 (101)
T ss_dssp CCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCSC
T ss_pred ccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHHHHHHcCcc
Confidence 48999999999999998732222 13688899998 57999999999999999988653
No 60
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=35.20 E-value=31 Score=22.15 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=15.3
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||+++|.++-..+.|++.++-.
T Consensus 29 ~dl~~~l~~~l~~~~~~~~dTlgG~i~~ 56 (94)
T 2oai_A 29 EELREVLGAELPDGEENNYHTLAGMCIS 56 (94)
T ss_dssp HHHHHHHTC-------CCCSBHHHHHHH
T ss_pred HHHHHHhCCCCCcccCCCCccHHHHHHH
Confidence 4568889999986321356799887644
No 61
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=35.10 E-value=40 Score=20.95 Aligned_cols=25 Identities=16% Similarity=0.144 Sum_probs=18.4
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++++++ +..|++.++-.
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~ 44 (81)
T 3lae_A 20 RDLNKMFNWELDTE---DARTFNGLILE 44 (81)
T ss_dssp HHHHHHHCCCCCCS---SCSBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 36788999999864 45788887543
No 62
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=33.33 E-value=42 Score=21.11 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=18.4
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||+++|++ +..|++.++-.
T Consensus 19 ~dl~~~l~~~l~~~---~~dTl~G~v~~ 43 (87)
T 2rk5_A 19 NDFNEYFETDLESD---NVDTIAGFYLT 43 (87)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHHH
Confidence 45788899999864 46788887543
No 63
>3b1l_X E3 ubiquitin-protein ligase parkin; proteasome, ALFA-beta-protein; 1.85A {Mus musculus} PDB: 1mg8_A 2zeq_A 2knb_A 1iyf_A
Probab=39.56 E-value=8.9 Score=23.08 Aligned_cols=48 Identities=21% Similarity=0.308 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChHHHHHHHHHH
Q 032464 58 AKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSL 105 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~--------~eI~~ds~l~dLGlDSLd~vELv~~L 105 (140)
....++..+++.|.+..+++++ ..+.++..|.++|+..-+.+.++..+
T Consensus 18 ~~~~tV~~lK~~i~~~~gi~~~~qrL~~~gk~L~d~~tL~~~~i~~g~~i~l~~rl 73 (76)
T 3b1l_X 18 DSDTSILQLKEVVAKQQGVPADQLRVIFAGKELPNHLTVQNCDLEQQSIVHIVQRP 73 (76)
Confidence 4567788888888888887652 12455666777777666666655443
No 64
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=33.21 E-value=43 Score=20.87 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=18.5
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++++++ +..|++.++-.
T Consensus 20 ~dl~~~l~~~l~~~---~~~Tl~G~i~~ 44 (83)
T 3llb_A 20 DAFNDFFGSEFSDE---EFDTVGGLVMS 44 (83)
T ss_dssp HHHHHHHCCCCCTT---TCSBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCcCHHHHHHH
Confidence 46788899999864 46688887644
No 65
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=31.75 E-value=44 Score=22.08 Aligned_cols=25 Identities=16% Similarity=0.118 Sum_probs=18.6
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++++++ ++.|++.++-.
T Consensus 23 ~dl~~~lg~~l~~e---~~dTlgGli~~ 47 (101)
T 2p3h_A 23 DEVERAIGYELPEG---DYETISGLLFD 47 (101)
T ss_dssp HHHHHHHTSCCCCS---SCCBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 45688899999864 56798887643
No 66
>2zjq_5 50S ribosomal protein L7/L12; ribosome, ribosomal subunit, thiopeptide antibiotics, complex, translational regulation, molecular switch; 3.30A {Deinococcus radiodurans} SCOP: d.45.1.1
Probab=29.60 E-value=33 Score=23.90 Aligned_cols=19 Identities=16% Similarity=0.518 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHhCCCc
Q 032464 95 SLDTVEIVMSLEEEFGIGV 113 (140)
Q Consensus 95 SLd~vELv~~LEeeFgI~i 113 (140)
=|.+.||+-.||++||+.-
T Consensus 17 llE~~eLv~~lee~fgv~a 35 (122)
T 2zjq_5 17 IMELADLIDGLKETWGVTA 35 (122)
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 4677899999999999973
No 67
>2j01_L 50S ribosomal protein L7; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_L 3i8i_I
Probab=29.53 E-value=34 Score=23.97 Aligned_cols=19 Identities=21% Similarity=0.518 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHhCCCc
Q 032464 95 SLDTVEIVMSLEEEFGIGV 113 (140)
Q Consensus 95 SLd~vELv~~LEeeFgI~i 113 (140)
=|.+.||+-.||++||+.-
T Consensus 17 llE~~eLv~~lee~fgv~a 35 (125)
T 2j01_L 17 VLELKQLIDALKEAWGVTA 35 (125)
T ss_pred HHHHHHHHHHHHHHcCCCc
Confidence 4677899999999999973
No 68
>3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p
Probab=28.46 E-value=12 Score=25.48 Aligned_cols=49 Identities=16% Similarity=0.342 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSL 105 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~--------~eI~~ds~l~dLGlDSLd~vELv~~L 105 (140)
....+++..|++.|.+..+++++ ..++++..|.++|+..-+.+.++..+
T Consensus 17 v~~~~TV~~LK~~I~~~~gip~~~QrLi~~Gk~L~D~~tL~~~~I~~gsti~l~~rl 73 (128)
T 3u5e_m 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73 (128)
T ss_dssp ---------------------------------------------------------
T ss_pred eCCCCCHHHHHHHHHHHhCcChHHEEEEECCEECCCCCchhhhccCCCCEEEEEEEc
Confidence 34567888888888888887652 23566777888998777777777655
No 69
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=28.38 E-value=59 Score=20.50 Aligned_cols=27 Identities=7% Similarity=-0.008 Sum_probs=18.7
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++++++ -....|++.++-.
T Consensus 26 ~dl~~~l~~~l~~~-~~~~~TlgG~i~~ 52 (90)
T 2p13_A 26 RKASNLLEHDLVDE-AERYSTLGGYLLW 52 (90)
T ss_dssp HHHHHHHTSCCCCT-TCCCCBHHHHHHH
T ss_pred HHHHHHHCCCCCCc-CCCCccHHHHHHH
Confidence 45688899999863 1246788887643
No 70
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=28.08 E-value=59 Score=20.60 Aligned_cols=25 Identities=16% Similarity=0.145 Sum_probs=18.5
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||+++|.+ ...|++.++-.
T Consensus 29 ~dl~~~l~~~l~~~---~~dTlgG~i~~ 53 (91)
T 2pli_A 29 EDINTFFGTEYSSE---EADTIGGLVIQ 53 (91)
T ss_dssp HHHHHHHCCCCCCS---SCCBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CCccHHHHHHH
Confidence 45688899999864 46798887643
No 71
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=27.62 E-value=59 Score=21.72 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=21.0
Q ss_pred HHHHHHHhCCC--cCccccccCCCHHHHHHHH
Q 032464 102 VMSLEEEFGIG--VEEENSQNITTVQEAADLI 131 (140)
Q Consensus 102 v~~LEeeFgI~--i~~~~l~~~~TV~dl~~~I 131 (140)
+-.+++.||++ +|.++-..+.|++.++-..
T Consensus 45 l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~ 76 (113)
T 3ded_A 45 LDRFREFFELEAPLPGEAGGNIHTLAGVMLYQ 76 (113)
T ss_dssp HHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHH
T ss_pred HHHHHHHhCCCccCCcccCCCCccHHHHHHHH
Confidence 34678899998 8863334677998876543
No 72
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=27.40 E-value=60 Score=20.53 Aligned_cols=25 Identities=12% Similarity=0.106 Sum_probs=18.5
Q ss_pred HHHHHHhCCCcCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIGVEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++++.+ ...|++.++-.
T Consensus 27 ~dl~~~l~~~l~~~---~~~TlgG~i~~ 51 (93)
T 2r2z_A 27 DEFNEVFETDLHMS---DVDTMAGYLIT 51 (93)
T ss_dssp HHHHHHHTCCCCCT---TCCBHHHHHHH
T ss_pred HHHHHHhCCCCCCC---CcccHHHHHHH
Confidence 45688899999864 46798887643
No 73
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=25.99 E-value=66 Score=20.06 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=17.9
Q ss_pred HHHHHHhCCC-cCccccccCCCHHHHHHH
Q 032464 103 MSLEEEFGIG-VEEENSQNITTVQEAADL 130 (140)
Q Consensus 103 ~~LEeeFgI~-i~~~~l~~~~TV~dl~~~ 130 (140)
-.+++.||++ +|+++ +..|++.++-.
T Consensus 20 ~dl~~~l~~~~l~~~~--~~~Tl~G~i~~ 46 (86)
T 2p4p_A 20 EDVMRALNIHTFPRDE--NYETIGGFMMY 46 (86)
T ss_dssp HHHHHHTTCCCSCCSC--SSCBHHHHHHH
T ss_pred HHHHHHhCCCCCCcCC--CCccHHHHHHH
Confidence 4578889996 87532 46788887543
No 74
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=25.84 E-value=44 Score=23.70 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHhCCCc
Q 032464 95 SLDTVEIVMSLEEEFGIGV 113 (140)
Q Consensus 95 SLd~vELv~~LEeeFgI~i 113 (140)
=|.+.||+-.||++|||.-
T Consensus 15 llE~~eLv~~leekfgv~a 33 (137)
T 2ftc_E 15 LLEISDLNELLKKTLKIQD 33 (137)
T ss_pred HHHHHHHHHHHHHHhCCCc
Confidence 4678899999999999973
No 75
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=25.47 E-value=39 Score=19.72 Aligned_cols=37 Identities=14% Similarity=0.322 Sum_probs=25.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032464 58 AKPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~--------eI~~ds~l~dLGlD 94 (140)
....++..+++.|.+..++++.. .+.++..|.++|+.
T Consensus 18 ~~~~tv~~lK~~i~~~~~i~~~~q~L~~~g~~L~d~~tL~~~~i~ 62 (76)
T 3a9j_A 18 EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 62 (76)
T ss_dssp CTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTCBTGGGTCC
T ss_pred CCCCcHHHHHHHHHHHHCcCHHHeEEEECCeECCCCCcHHHcCCC
Confidence 34667888999999999987521 35566667777763
No 76
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.87 E-value=45 Score=19.90 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032464 59 KPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 59 ~~ei~~~V~~il~~~l~i~~~~--------eI~~ds~l~dLGlD 94 (140)
...++..+++.|.+..++++.. .+.++..|.++|+.
T Consensus 26 ~~~tV~~LK~~i~~~~~i~~~~qrL~~~gk~L~d~~tL~~~~i~ 69 (81)
T 2dzi_A 26 EDELVSTLKQLVSEKLNVPVRQQRLLFKGKALADGKRLSDYSIG 69 (81)
T ss_dssp SSCBHHHHHHHHHHHTCCCTTTCEEEETTEECCTTSBGGGGTCC
T ss_pred CCCcHHHHHHHHHHHHCcCHHHEEEEECCeECCCCCcHHHcCCC
Confidence 4567888999999999987621 24556666677763
No 77
>2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana}
Probab=24.68 E-value=50 Score=20.53 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=25.6
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032464 58 AKPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~--------eI~~ds~l~dLGlD 94 (140)
....++..+++.|.+..+++++. .+.++..|.++|+.
T Consensus 29 ~~~~TV~~LK~~I~~~~gip~~~qrL~~~Gk~L~D~~tL~~~gi~ 73 (85)
T 2kd0_A 29 SPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVG 73 (85)
T ss_dssp CTTSBHHHHHHHHHHHHCCCTTTCEEEETTEECCTTCBTTTTTCC
T ss_pred CCCCcHHHHHHHHHHHHCcChHHEEEEECCeECCCcCCHHHCCCC
Confidence 34567888999999999987631 24556666677763
No 78
>3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f
Probab=24.51 E-value=16 Score=26.09 Aligned_cols=50 Identities=16% Similarity=0.338 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCChHHHHHHHHHHH
Q 032464 57 SAKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADSLDTVEIVMSLE 106 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~--------~eI~~ds~l~dLGlDSLd~vELv~~LE 106 (140)
....+++..|++.|.+..+++++ ..+.++..|.++|+..-+.+.++..+.
T Consensus 17 V~~~~TV~~LK~~I~~~~gip~~~QrLi~~Gk~L~D~~tL~dygI~~gstL~Lvlrl~ 74 (152)
T 3u5c_f 17 VESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 74 (152)
T ss_dssp ----------------------------------------------------------
T ss_pred ECCCCCHHHHHHHHHHHhCCCHHHEEEEECCEEccccCcHHHcCCCCCCEEEEEeecc
Confidence 34567888888888888887652 235667778888887777777776654
No 79
>3rio_A PTSGHI operon antiterminator; twisted beta sheet, four helix bundle, transcriptional antitermination, transcription; 1.99A {Bacillus subtilis}
Probab=23.97 E-value=43 Score=24.05 Aligned_cols=21 Identities=19% Similarity=0.336 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhCCCcCcccc
Q 032464 98 TVEIVMSLEEEFGIGVEEENS 118 (140)
Q Consensus 98 ~vELv~~LEeeFgI~i~~~~l 118 (140)
..+++..|++.||+++|++++
T Consensus 147 a~~~~~~Ie~~~~i~lpedEi 167 (180)
T 3rio_A 147 AKEVIDMINEKAGLCLPEGEI 167 (180)
T ss_dssp HHHHHHHHHHHHTSCCCTTHH
T ss_pred HHHHHHHHHHHHCCCCCHHHH
Confidence 356888899999999999885
No 80
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=23.24 E-value=55 Score=19.65 Aligned_cols=39 Identities=13% Similarity=0.302 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCC--------CCCCCCCCccccCCCh
Q 032464 57 SAKPETVQKVCEIVRRQLALPAE--------TELTSESKFSALGADS 95 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~~--------~eI~~ds~l~dLGlDS 95 (140)
.....++..+++.|.+..+++++ ..+.++..|.++|+..
T Consensus 20 v~~~~tV~~lK~~i~~~~~ip~~~qrL~~~g~~L~d~~tL~~~~i~~ 66 (85)
T 3n3k_B 20 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIHN 66 (85)
T ss_dssp CCTTCBHHHHHHHHHHHHCCCGGGEEEEETBEECCTTCBTTTTTCCT
T ss_pred ECCCCcHHHHHHHHHHHHCCCHHHEEEEECCeECCCCCCHHHCCCCC
Confidence 34567888899999999998762 1356666777777644
No 81
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=23.20 E-value=23 Score=23.21 Aligned_cols=56 Identities=7% Similarity=0.256 Sum_probs=44.1
Q ss_pred cCCChHHHHHHHHHHHHHHhCCCCC--CCCCCCCCcc-ccCCChHHHHHHHHHHHHHhC
Q 032464 55 SCSAKPETVQKVCEIVRRQLALPAE--TELTSESKFS-ALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 55 ~~m~~~ei~~~V~~il~~~l~i~~~--~eI~~ds~l~-dLGlDSLd~vELv~~LEeeFg 110 (140)
..+++.++...|.+.|++.-=.++. ..|.-|..|. =+|-|++.+.++-..|...|-
T Consensus 25 ~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~ 83 (93)
T 1v31_A 25 EVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLS 83 (93)
T ss_dssp SEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCB
T ss_pred CccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcC
Confidence 3479999999999999987322331 3578888888 579999999999999988764
No 82
>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix-bundl helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} SCOP: a.108.1.1 d.45.1.1 PDB: 1dd4_A* 1giy_I 1yl3_I
Probab=23.20 E-value=34 Score=24.07 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=16.9
Q ss_pred CChHHHHHHHHHHHHHhCCC
Q 032464 93 ADSLDTVEIVMSLEEEFGIG 112 (140)
Q Consensus 93 lDSLd~vELv~~LEeeFgI~ 112 (140)
+.=|.+.||+-.||++||+.
T Consensus 13 ltllE~~eLv~~lee~fgv~ 32 (128)
T 1dd3_A 13 LTVSELAELVKKLEDKFGVT 32 (128)
T ss_dssp SCHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHHHhCCC
Confidence 33477889999999999996
No 83
>2pag_A Hypothetical protein; nysgx, target 10412I, novel fold, structural genomics, PSI-2 structure initiative; 1.60A {Pseudomonas syringae PV} SCOP: d.369.1.1
Probab=23.14 E-value=41 Score=23.25 Aligned_cols=18 Identities=17% Similarity=0.228 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhCCCcCcc
Q 032464 99 VEIVMSLEEEFGIGVEEE 116 (140)
Q Consensus 99 vELv~~LEeeFgI~i~~~ 116 (140)
-+.+..+|+.+|+++|++
T Consensus 24 ~e~I~~~E~~Lgi~fP~d 41 (135)
T 2pag_A 24 EDQLVEIEEQLFINIPFV 41 (135)
T ss_dssp HHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHHCCCCCHH
Confidence 577889999999999975
No 84
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.56 E-value=77 Score=17.74 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=18.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCC
Q 032464 57 SAKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~ 78 (140)
-.+.++.+.|.+.+.+.+|+++
T Consensus 14 eqk~~l~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 14 EQKRNLVEKVTEAVKETTGASE 35 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCG
T ss_pred HHHHHHHHHHHHHHHHHhCcCc
Confidence 3467889999999999999987
No 85
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=22.26 E-value=78 Score=17.74 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=18.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCC
Q 032464 57 SAKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 57 m~~~ei~~~V~~il~~~l~i~~ 78 (140)
..+.++.+.|.+.+.+.+++++
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~ 35 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPL 35 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHhCcCc
Confidence 3467889999999999999987
No 86
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=21.96 E-value=54 Score=19.07 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=26.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032464 58 AKPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~~~--------eI~~ds~l~dLGlD 94 (140)
....++..+++.|.+..++++.. .+.++..|.++|+.
T Consensus 18 ~~~~tv~~lK~~i~~~~~i~~~~q~L~~~g~~L~d~~tL~~~~i~ 62 (76)
T 1ndd_A 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIL 62 (76)
T ss_dssp CTTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBGGGGTCC
T ss_pred CCCChHHHHHHHHHHHHCcChHHEEEEECCEECCCCCcHHHcCCC
Confidence 34677888999999999987621 24566667777763
No 87
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=21.41 E-value=1e+02 Score=17.66 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHHHhCCCC
Q 032464 58 AKPETVQKVCEIVRRQLALPA 78 (140)
Q Consensus 58 ~~~ei~~~V~~il~~~l~i~~ 78 (140)
.+.++.+.|.+.+.+.+|+++
T Consensus 14 qK~~L~~~it~~~~~~lg~~~ 34 (62)
T 3m20_A 14 KKREFVERLTSVAAEIYGMDR 34 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHhCcCc
Confidence 467899999999999999987
No 88
>1dtc_A Acetyl-delta-toxin; NMR {Staphylococcus aureus} SCOP: j.7.1.1 PDB: 2dtb_A 2kam_A*
Probab=21.26 E-value=65 Score=16.27 Aligned_cols=17 Identities=29% Similarity=0.384 Sum_probs=12.9
Q ss_pred CCCHHHHHHHHHHHHHh
Q 032464 121 ITTVQEAADLIEKLVEK 137 (140)
Q Consensus 121 ~~TV~dl~~~I~~~~~~ 137 (140)
+.|++|++.+|.+-+.+
T Consensus 6 isTIgdfvKlI~~TV~K 22 (26)
T 1dtc_A 6 ISTIGDLVKWIIDTVNK 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46889999998876653
No 89
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=20.92 E-value=4.8 Score=30.83 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=28.1
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCCCCCCccccCCChHHHHHHHHHHHHHhC
Q 032464 56 CSAKPETVQKVCEIVRRQLALPAETELTSESKFSALGADSLDTVEIVMSLEEEFG 110 (140)
Q Consensus 56 ~m~~~ei~~~V~~il~~~l~i~~~~eI~~ds~l~dLGlDSLd~vELv~~LEeeFg 110 (140)
...+.++++.|.++.++.|+++. +.+|++| +.++..|++.|.
T Consensus 23 ~~P~~~~E~~la~iw~~vL~~~~------~d~Ff~l-------~~l~~~~~~~f~ 64 (319)
T 2hfk_A 23 GADTGAGAGMFRALFRQAVEDDR------YGEFLDV-------LAEASAFRPQFA 64 (319)
T ss_dssp -------CCHHHHHHHHHHHTTC------HHHHHHH-------HHHHHTTSCEEC
T ss_pred CCCCCchHHHHHHHHHHHHcCCc------hHHHHHH-------HHHHHHHHHhcC
Confidence 35667888899999999999753 7788888 777777776654
No 90
>2jve_A PROD1; LY-6, three-finger snake toxin, UPAR, CD59, LIMB regeneration; NMR {Notophthalmus viridescens}
Probab=20.64 E-value=32 Score=21.95 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=20.8
Q ss_pred CCcCccccccCCCHHHHHHHHHHHH
Q 032464 111 IGVEEENSQNITTVQEAADLIEKLV 135 (140)
Q Consensus 111 I~i~~~~l~~~~TV~dl~~~I~~~~ 135 (140)
+++|..++++++||+..++.+++.-
T Consensus 48 vqlpyseiqecktvqqcaevleevt 72 (91)
T 2jve_A 48 VQLPYSEIQECKTVQQCAEVLEEVT 72 (91)
T ss_dssp EECSSSEEEEEECHHHHHHHHHHHH
T ss_pred EECCHHHHHHhHHHHHHHHHHHHHH
Confidence 4678889999999999999887653
No 91
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S
Probab=20.48 E-value=59 Score=19.09 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCC--------CCCCCCCccccCCC
Q 032464 59 KPETVQKVCEIVRRQLALPAET--------ELTSESKFSALGAD 94 (140)
Q Consensus 59 ~~ei~~~V~~il~~~l~i~~~~--------eI~~ds~l~dLGlD 94 (140)
...++..+++.|.+..++++.. .+.++..|.++|+.
T Consensus 22 ~~~tV~~LK~~i~~~~~i~~~~qrL~~~gk~L~d~~tL~~~~i~ 65 (77)
T 2bwf_A 22 PESTVLQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQ 65 (77)
T ss_dssp TTCBHHHHHHHHHHHHCCCGGGEEEEETTEECCTTSBTGGGTCC
T ss_pred CCCcHHHHHHHHHHHhCCCHHHEEEEECCeEcCCCCCHHHcCCC
Confidence 4567788999999989987621 24566667777763
Done!