BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032473
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XH45|RS7_BRAOL 40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1
Length = 191
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 111/139 (79%), Positives = 132/139 (94%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MD++GNRKA+V+YVP+RLRKA+RKIHSRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAV
Sbjct: 52 MDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
QRPR+RTLT+VH+AMLEDV YPAEIVGKR RYR+DG+KI+K++L+PKERNNTEYKLE+
Sbjct: 112 QRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMV 171
Query: 121 GVYRKLTGKDVVFDYPITD 139
GVYRKLTGKDVVF+YP+ D
Sbjct: 172 GVYRKLTGKDVVFEYPVAD 190
>sp|Q8LJU5|RS7_ORYSJ 40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7
PE=2 SV=2
Length = 192
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/140 (83%), Positives = 131/140 (93%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MD+ GNRKA+++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV
Sbjct: 52 MDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
RPR+RTLTAVHD +LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS
Sbjct: 112 VRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFS 171
Query: 121 GVYRKLTGKDVVFDYPITDA 140
VYR+L GKDVVFDYP+T+
Sbjct: 172 SVYRRLCGKDVVFDYPMTET 191
>sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1
Length = 190
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 135/139 (97%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
+DVSG +KA+V++VPYRLRK++RKIH RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAV
Sbjct: 52 IDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
QRPRSRTLTAVHDAMLED+VYPAEIVGKRVRYRLDGSKI+K+FLDPK +N+TE KLE+F+
Sbjct: 112 QRPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFA 171
Query: 121 GVYRKLTGKDVVFDYPITD 139
GVYRKL+GKDVVF++P+T+
Sbjct: 172 GVYRKLSGKDVVFEFPLTE 190
>sp|Q9C514|RS71_ARATH 40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2
SV=1
Length = 191
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/140 (82%), Positives = 133/140 (95%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
+D+SG RKAIVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA
Sbjct: 52 VDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAA 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
+RPR+RTLT+VH+A+L+DVV PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS
Sbjct: 112 KRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFS 171
Query: 121 GVYRKLTGKDVVFDYPITDA 140
VY+KLTGKDVVF++PIT+A
Sbjct: 172 AVYKKLTGKDVVFEFPITEA 191
>sp|Q8LD03|RS73_ARATH 40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2
SV=2
Length = 190
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 129/137 (94%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AV
Sbjct: 52 MDISGNRKAVVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
QRPR+RTLT+VH+AMLEDV +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+
Sbjct: 112 QRPRNRTLTSVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMV 171
Query: 121 GVYRKLTGKDVVFDYPI 137
GVYRKLTGKDVVF+YP+
Sbjct: 172 GVYRKLTGKDVVFEYPV 188
>sp|Q9XET4|RS7_SECCE 40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1
Length = 192
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 114/140 (81%), Positives = 131/140 (93%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MDV+GNRKA+V++VPYRLRK +RKIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV
Sbjct: 52 MDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
RPR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDGSKIIKIFLDP ERNNTEYKL++F+
Sbjct: 112 VRPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFT 171
Query: 121 GVYRKLTGKDVVFDYPITDA 140
VYR+L GKDVV++YP+ +
Sbjct: 172 AVYRRLCGKDVVYEYPVAET 191
>sp|Q9M885|RS72_ARATH 40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2
SV=1
Length = 191
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/140 (79%), Positives = 131/140 (93%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAV
Sbjct: 52 MDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAV 111
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
QRPR+RTLT+VH+AMLEDV YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+
Sbjct: 112 QRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMV 171
Query: 121 GVYRKLTGKDVVFDYPITDA 140
GVYRKLTGKDVVF+YP+ +A
Sbjct: 172 GVYRKLTGKDVVFEYPVIEA 191
>sp|Q949H0|RS7_HORVU 40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1
Length = 191
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 129/140 (92%), Gaps = 1/140 (0%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
MDV GNRKA+V++VPYRLRK +RKIH RLVRELE+ SGKDVV +ATRRIVRPPKKGSAV
Sbjct: 52 MDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAV 110
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
QRPR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDG+K+IKI+LDPKERNNTEYKLE+FS
Sbjct: 111 QRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFS 170
Query: 121 GVYRKLTGKDVVFDYPITDA 140
VYR+L GKDVVF+YP+ +
Sbjct: 171 AVYRRLCGKDVVFEYPVAET 190
>sp|Q90YR7|RS7_ICTPU 40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1
Length = 194
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 114/140 (81%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G+RKAI+++VP KA++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGSRKAIIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+VYP+EIVGKR+R +LD S++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+F+GVY+KLTGKDVVF++P
Sbjct: 171 ETFAGVYKKLTGKDVVFEFP 190
>sp|P62083|RS7_RAT 40S ribosomal protein S7 OS=Rattus norvegicus GN=Rps7 PE=1 SV=1
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDV F++P
Sbjct: 171 ETFSGVYKKLTGKDVNFEFP 190
>sp|P62082|RS7_MOUSE 40S ribosomal protein S7 OS=Mus musculus GN=Rps7 PE=2 SV=1
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDV F++P
Sbjct: 171 ETFSGVYKKLTGKDVNFEFP 190
>sp|P62081|RS7_HUMAN 40S ribosomal protein S7 OS=Homo sapiens GN=RPS7 PE=1 SV=1
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDV F++P
Sbjct: 171 ETFSGVYKKLTGKDVNFEFP 190
>sp|Q5RT64|RS7_FELCA 40S ribosomal protein S7 OS=Felis catus GN=RPS7 PE=2 SV=1
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDV F++P
Sbjct: 171 ETFSGVYKKLTGKDVNFEFP 190
>sp|A6H769|RS7_BOVIN 40S ribosomal protein S7 OS=Bos taurus GN=RPS7 PE=2 SV=1
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+V+P+EIVGKR+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDV F++P
Sbjct: 171 ETFSGVYKKLTGKDVNFEFP 190
>sp|P02362|RS7_XENLA 40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2
Length = 194
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLTAVHDA+LED+VYP+EIVG+R+R +LDGS++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDVVF++P
Sbjct: 171 ETFSGVYKKLTGKDVVFEFP 190
>sp|P50894|RS7_TAKRU 40S ribosomal protein S7 OS=Takifugu rubripes GN=rps7 PE=3 SV=1
Length = 194
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 114/140 (81%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS-- 58
++V G+RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRS 110
Query: 59 --AVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+RPRSRTLT+VHDA+LED+V+P+EIVGKR+R ++D S++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTSVHDAILEDLVFPSEIVGKRIRVKMDSSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+FSGVY+KLTGKDVVF++P
Sbjct: 171 ETFSGVYKKLTGKDVVFEFP 190
>sp|P62084|RS7_DANRE 40S ribosomal protein S7 OS=Danio rerio GN=rps7 PE=2 SV=1
Length = 194
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 113/140 (80%), Gaps = 4/140 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G+RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S
Sbjct: 51 IEVGGSRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRT 110
Query: 61 Q----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKL 116
+ RPRSRTLT VHDA+LED+V+P+EIVGKR+R +LD S++IK+ LD ++NN E+K+
Sbjct: 111 KNKQKRPRSRTLTNVHDAILEDLVFPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKV 170
Query: 117 ESFSGVYRKLTGKDVVFDYP 136
E+F+GVY+KLTGKDV+F++P
Sbjct: 171 ETFAGVYKKLTGKDVIFEFP 190
>sp|P33514|RS7_ANOGA 40S ribosomal protein S7 OS=Anopheles gambiae GN=RpS7 PE=2 SV=2
Length = 192
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 110/136 (80%), Gaps = 4/136 (2%)
Query: 5 GNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKG----SAV 60
N+KAI++YVP +KA++K+ +RLVRELEKKFSGK VV IA RRI+ P +G +
Sbjct: 53 NNKKAIIIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQ 112
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
+RPRSRTLTAV+DA+LED+V+PAE+VGKR+R +LDGS++IK+ LD ++ E+K+++F+
Sbjct: 113 KRPRSRTLTAVYDAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFA 172
Query: 121 GVYRKLTGKDVVFDYP 136
VY+KLTG+DV F++P
Sbjct: 173 SVYKKLTGRDVTFEFP 188
>sp|Q9NB21|RS7_CULQU 40S ribosomal protein S7 OS=Culex quinquefasciatus GN=RpS7 PE=2
SV=1
Length = 192
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 110/136 (80%), Gaps = 4/136 (2%)
Query: 5 GNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKG----SAV 60
N+KAIV+YVP +KA++K+ +RLVRELEKKFSGK VV I RRI+ P++G +
Sbjct: 53 NNKKAIVIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIGERRILPKPQRGRRDPNKQ 112
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
+RPRSRTLTAV+DA+LED+V+PAE+VGKR+R +LDGS++IK+ LD ++ E+K+++F+
Sbjct: 113 KRPRSRTLTAVYDAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFT 172
Query: 121 GVYRKLTGKDVVFDYP 136
VY+KLTG+DV F++P
Sbjct: 173 SVYKKLTGRDVTFEFP 188
>sp|Q10101|RS7_SCHPO 40S ribosomal protein S7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rps7 PE=1 SV=2
Length = 195
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 104/139 (74%), Gaps = 2/139 (1%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
++V G +KAIVV+VP L KA+ K +RL RELEKKF+ + V+ IA RRI+ P + S V
Sbjct: 51 VEVGGGKKAIVVFVPQPLLKAFHKCQARLTRELEKKFADRHVIFIAQRRILPKPGRKSRV 110
Query: 61 --QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLES 118
+RPRSRTLTAVH+A+LED+V+P EI+GKR R DG K IK+FLD ++ N +YKL S
Sbjct: 111 TQKRPRSRTLTAVHNAILEDIVFPTEIIGKRTRQATDGRKTIKVFLDNRDANTVDYKLGS 170
Query: 119 FSGVYRKLTGKDVVFDYPI 137
FS VY KLTGK+V F++P+
Sbjct: 171 FSSVYHKLTGKNVTFEFPV 189
>sp|Q23312|RS7_CAEEL 40S ribosomal protein S7 OS=Caenorhabditis elegans GN=rps-7 PE=3
SV=1
Length = 194
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 103/137 (75%), Gaps = 5/137 (3%)
Query: 5 GNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV---- 60
GN+ AI++YVP KA+ KIH LVRELEKKF G+D++++A RRI+ P++GS
Sbjct: 54 GNKSAIIIYVPVPQLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQK 113
Query: 61 -QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESF 119
+RPRSRTLTAVHDA L+++VYPAE+VG+R+R +LDG K+ K+ LD + N +K+ F
Sbjct: 114 QKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVF 173
Query: 120 SGVYRKLTGKDVVFDYP 136
+ VYRKLTGKDV F++P
Sbjct: 174 ASVYRKLTGKDVTFEFP 190
>sp|Q962S0|RS7_SPOFR 40S ribosomal protein S7 OS=Spodoptera frugiperda GN=RpS7 PE=2 SV=1
Length = 190
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 105/135 (77%), Gaps = 4/135 (2%)
Query: 6 NRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----Q 61
N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +
Sbjct: 52 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQK 111
Query: 62 RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSG 121
RPRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F
Sbjct: 112 RPRSRTLTSVYDAILEDLVFPAEIVGKRIRIKLDGSQLIKVHLDKNQQTTIEHKVDTFQS 171
Query: 122 VYRKLTGKDVVFDYP 136
VY+KLTG++V F++P
Sbjct: 172 VYKKLTGREVTFEFP 186
>sp|P48155|RS7_MANSE 40S ribosomal protein S7 OS=Manduca sexta GN=RpS7 PE=2 SV=1
Length = 190
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 105/135 (77%), Gaps = 4/135 (2%)
Query: 6 NRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV----Q 61
N+K+I++YVP KA++KI RLVRELEKKFSGK VV I R+I+ P + V +
Sbjct: 52 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFIGDRKILPKPSHKTRVANKQK 111
Query: 62 RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSG 121
RPRSRTLT+V+DA+LED+V+PAEIVGKR+R +LDGS++IK+ LD ++ E+K+++F
Sbjct: 112 RPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQS 171
Query: 122 VYRKLTGKDVVFDYP 136
VY+KLTG++V F++P
Sbjct: 172 VYKKLTGREVTFEFP 186
>sp|O43105|RS7_NEUCR 40S ribosomal protein S7 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-7
PE=3 SV=2
Length = 202
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 109/146 (74%), Gaps = 6/146 (4%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS-- 58
++V +KAIV++VP + + ++ RL RELEKKFS + V+++A+RRI+ PK+ S
Sbjct: 55 IEVGHGKKAIVIFVPVPSLQGFHRVQQRLTRELEKKFSDRHVLIVASRRILPRPKRSSRS 114
Query: 59 ----AVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEY 114
+RPRSRTLTAVHDA+L D+VYP EIVGKR+R + DGSK +K+ LD KER + +Y
Sbjct: 115 RNTLKQKRPRSRTLTAVHDAILTDLVYPVEIVGKRLRVKEDGSKTLKVILDEKERGSVDY 174
Query: 115 KLESFSGVYRKLTGKDVVFDYPITDA 140
+L+++S VYR+LTGK+V+F++P+ A
Sbjct: 175 RLDTYSAVYRRLTGKNVLFEFPLVSA 200
>sp|Q9VA91|RS7_DROME 40S ribosomal protein S7 OS=Drosophila melanogaster GN=RpS7 PE=2
SV=1
Length = 194
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 108/136 (79%), Gaps = 4/136 (2%)
Query: 5 GNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS----AV 60
G++KA+++YVP +K ++KI LVRELEKKFSGK VV+IA R+I+ P + +
Sbjct: 53 GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIAERKILPKPTRKARNPLKQ 112
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
+RPRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+
Sbjct: 113 KRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFT 172
Query: 121 GVYRKLTGKDVVFDYP 136
VY+KLTG+DV F++P
Sbjct: 173 SVYKKLTGRDVTFEFP 188
>sp|P48164|RS7B_YEAST 40S ribosomal protein S7-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS7B PE=1 SV=1
Length = 190
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 101/138 (73%), Gaps = 2/138 (1%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS-A 59
+DV+G +KA+V++VP AY K+ ++L RELEKKF + V+ +A RRI+ P + S
Sbjct: 49 IDVTGGKKALVLFVPVPALSAYHKVQTKLTRELEKKFPDRHVIFLAERRILPKPSRTSRQ 108
Query: 60 VQ-RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLES 118
VQ RPRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLES
Sbjct: 109 VQKRPRSRTLTAVHDKVLEDMVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLES 168
Query: 119 FSGVYRKLTGKDVVFDYP 136
F VY KLTGK +VF+ P
Sbjct: 169 FQAVYNKLTGKQIVFEIP 186
>sp|P62085|RS7_DROYA 40S ribosomal protein S7 OS=Drosophila yakuba GN=RpS7 PE=2 SV=1
Length = 194
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 107/136 (78%), Gaps = 4/136 (2%)
Query: 5 GNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS----AV 60
G++KA+++YVP +K ++KI LVRELEKKFSGK VV+I R+I+ P + +
Sbjct: 53 GSKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVIGERKILPKPTRKARNPLKQ 112
Query: 61 QRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFS 120
+RPRSRTLTAV+DA+LED+V+PAEIVGKR+R +LDGS+++K+ LD ++ E+K+++F+
Sbjct: 113 KRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFT 172
Query: 121 GVYRKLTGKDVVFDYP 136
VY+KLTG+DV F++P
Sbjct: 173 SVYKKLTGRDVTFEFP 188
>sp|P26786|RS7A_YEAST 40S ribosomal protein S7-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS7A PE=1 SV=4
Length = 190
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGS-A 59
+DV+G +KA+ ++VP + K+ ++L RELEKKF + V+ +A RRI+ P + S
Sbjct: 49 IDVAGGKKALAIFVPVPSLAGFHKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQ 108
Query: 60 VQ-RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLES 118
VQ RPRSRTLTAVHD +LED+V+P EIVGKRVRY + G+KI K+ LD K+ +YKLES
Sbjct: 109 VQKRPRSRTLTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQIDYKLES 168
Query: 119 FSGVYRKLTGKDVVFDYP 136
F VY KLTGK +VF+ P
Sbjct: 169 FQAVYNKLTGKQIVFEIP 186
>sp|Q54I41|RS7_DICDI 40S ribosomal protein S7 OS=Dictyostelium discoideum GN=rps7 PE=1
SV=1
Length = 193
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
Query: 1 MDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAV 60
+DV+ ++KA+V++VP+R K Y KI +L E+EKK GK V+ IA RRI+R P + +
Sbjct: 49 VDVAESKKAVVIFVPFRQLKNYNKIQQKLTYEVEKKLGGKQVMFIAQRRIIRKPASNNKI 108
Query: 61 Q---RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLE 117
+ RP SRT+ AVHDA+L+D+V+P IVG+R+RYRLDGSK+ KI+LD KE + K++
Sbjct: 109 KMQKRPISRTIKAVHDAILDDLVFPNTIVGRRLRYRLDGSKLHKIYLDRKEMLSNISKVD 168
Query: 118 SFSGVYRKLTGKDVVFDY 135
SFS VY KLTGK+VVF++
Sbjct: 169 SFSAVYHKLTGKEVVFEF 186
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 19 RKAYR--KIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAML 76
RK R ++++RL E K D+ + P KKGS VQ P +RTLT HD +L
Sbjct: 119 RKGQREQRVNARLQEERRK-----DMAFAESIWTFMPGKKGSVVQGPNTRTLTNAHDGIL 173
Query: 77 EDVVYPAEIVGKRVRYRLDGSKIIK 101
+D + A+I GK V + + +IK
Sbjct: 174 DD-INCAQIAGKHVGDHSNCANVIK 197
>sp|Q16CZ6|MNMG_ROSDO tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=mnmG PE=3 SV=1
Length = 623
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 55 KKGSAVQRPRSRTLTAV-HDAMLEDVVYPAE---IVGKRVRYRLDGSKIIKIFL 104
+KG AVQ PR+++ A+ H+ MLE IVG+ V + +DG ++I + L
Sbjct: 87 RKGPAVQGPRAQSDRAIYHNRMLEATDQQQNLDIIVGEAVDFVMDGERVIGVVL 140
>sp|P47839|RS7_SALSA 40S ribosomal protein S7 (Fragment) OS=Salmo salar GN=rps7 PE=3
SV=1
Length = 44
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Query: 48 RRIVRPPKKGSAVQ----RPRSRTLTAVHDAM 75
RRI+ P + S ++ RPRSRTLTAVHDA+
Sbjct: 13 RRILPKPTRKSRIKNKQKRPRSRTLTAVHDAI 44
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus
GN=PLOD1 PE=1 SV=1
Length = 730
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 101 KIFLDPKERNNTEYKLESFSGVYRKLTG 128
KIFLDP++R N L+ S +++ L G
Sbjct: 188 KIFLDPEKRENINISLDHRSRIFQNLNG 215
>sp|Q8IS21|GEFB_DICDI Ras guanine nucleotide exchange factor B OS=Dictyostelium discoideum
GN=gefB PE=2 SV=1
Length = 1529
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 108 ERNNTEYKLESFSGVYRKLTGKDVV 132
E N +Y +ESF VY LT KD V
Sbjct: 1024 EENQLQYAIESFMEVYNHLTSKDKV 1048
>sp|Q5SI82|FTSH_THET8 ATP-dependent zinc metalloprotease FtsH OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=ftsH PE=1 SV=1
Length = 624
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 31 RELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDA 74
RE +K + KD+ A R ++ P KK S V PR R +TA H+A
Sbjct: 378 REGRRKITMKDLEEAADRVMMGPAKK-SLVLSPRDRRITAYHEA 420
>sp|Q9ZEY8|LEU1_BUCAI 2-isopropylmalate synthase OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=leuA PE=3 SV=3
Length = 519
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 78 DVVYPAEIVGKRVRYRL---DGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKD-VVF 133
+++ P+ I K V+ L G +K ++D NN++Y ++ + KL K VF
Sbjct: 312 EIMEPSSIGLKEVKLNLTSRSGRAAVKHYMDEMGYNNSDYNIDELYTAFLKLADKKGQVF 371
Query: 134 DYPI 137
DY +
Sbjct: 372 DYDL 375
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,839,600
Number of Sequences: 539616
Number of extensions: 1999538
Number of successful extensions: 4621
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4561
Number of HSP's gapped (non-prelim): 43
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)