Your job contains 1 sequence.
>032476
MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
IGKECADLWPRIASAANAIV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032476
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018309 - symbol:AT1G04480 species:3702 "Arabi... 717 7.7e-71 1
TAIR|locus:2051119 - symbol:AT2G33370 species:3702 "Arabi... 717 7.7e-71 1
TAIR|locus:2100915 - symbol:emb2171 "embryo defective 217... 717 7.7e-71 1
ZFIN|ZDB-GENE-030131-8756 - symbol:rpl23 "ribosomal prote... 621 1.2e-60 1
UNIPROTKB|Q3T057 - symbol:RPL23 "60S ribosomal protein L2... 618 2.4e-60 1
UNIPROTKB|F2Z4P3 - symbol:RPL23 "60S ribosomal protein L2... 618 2.4e-60 1
UNIPROTKB|P62829 - symbol:RPL23 "60S ribosomal protein L2... 618 2.4e-60 1
UNIPROTKB|P62831 - symbol:RPL23 "60S ribosomal protein L2... 618 2.4e-60 1
MGI|MGI:1929455 - symbol:Rpl23 "ribosomal protein L23" sp... 618 2.4e-60 1
RGD|62067 - symbol:Rpl23 "ribosomal protein L23" species:... 618 2.4e-60 1
UNIPROTKB|J9P897 - symbol:J9P897 "Uncharacterized protein... 614 6.4e-60 1
UNIPROTKB|Q9XSU3 - symbol:RPL23 "60S ribosomal protein L2... 608 2.7e-59 1
FB|FBgn0010078 - symbol:RpL23 "Ribosomal protein L23" spe... 607 3.5e-59 1
UNIPROTKB|E1BY89 - symbol:RPL23 "Uncharacterized protein"... 600 1.9e-58 1
POMBASE|SPAC3G9.03 - symbol:rpl2301 "60S ribosomal protei... 581 2.0e-56 1
POMBASE|SPCC1322.11 - symbol:rpl2302 "60S ribosomal prote... 581 2.0e-56 1
WB|WBGene00004435 - symbol:rpl-23 species:6239 "Caenorhab... 567 6.1e-55 1
ASPGD|ASPL0000077643 - symbol:AN4494 species:162425 "Emer... 563 1.6e-54 1
SGD|S000000183 - symbol:RPL23A "Ribosomal 60S subunit pro... 562 2.1e-54 1
SGD|S000000919 - symbol:RPL23B "Ribosomal 60S subunit pro... 562 2.1e-54 1
UNIPROTKB|G3MY15 - symbol:G3MY15 "Uncharacterized protein... 511 5.2e-49 1
UNIPROTKB|J3KT29 - symbol:RPL23 "60S ribosomal protein L2... 510 6.7e-49 1
DICTYBASE|DDB_G0290315 - symbol:rpl23 "S60 ribosomal prot... 506 1.8e-48 1
RGD|2318559 - symbol:LOC100362226 "ribosomal protein L23-... 462 8.1e-44 1
UNIPROTKB|F1M637 - symbol:F1M637 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|C9JD32 - symbol:RPL23 "60S ribosomal protein L2... 357 1.1e-32 1
UNIPROTKB|J3KTJ3 - symbol:RPL23 "Ribosomal protein L23, i... 355 1.8e-32 1
UNIPROTKB|B9ZVP7 - symbol:RPL23 "60S ribosomal protein L2... 345 2.0e-31 1
TIGR_CMR|DET_0484 - symbol:DET_0484 "ribosomal protein L1... 218 5.8e-18 1
TIGR_CMR|CHY_2299 - symbol:CHY_2299 "ribosomal protein L1... 183 3.0e-14 1
UNIPROTKB|P66069 - symbol:rplN "50S ribosomal protein L14... 179 7.9e-14 1
UNIPROTKB|P0C438 - symbol:rpl14 "50S ribosomal protein L1... 177 1.3e-13 1
UNIPROTKB|P0C439 - symbol:rpl14 "50S ribosomal protein L1... 177 1.3e-13 1
UNIPROTKB|P0C440 - symbol:rpl14 "50S ribosomal protein L1... 177 1.3e-13 1
UNIPROTKB|Q6END7 - symbol:rpl14 "50S ribosomal protein L1... 177 1.3e-13 1
TIGR_CMR|CJE_1865 - symbol:CJE_1865 "ribosomal protein L1... 172 4.4e-13 1
TIGR_CMR|GSU_2847 - symbol:GSU_2847 "ribosomal protein L1... 172 4.4e-13 1
TIGR_CMR|BA_0120 - symbol:BA_0120 "ribosomal protein L14"... 170 7.1e-13 1
TIGR_CMR|CBU_0248 - symbol:CBU_0248 "ribosomal protein L1... 156 2.2e-11 1
TIGR_CMR|ECH_0419 - symbol:ECH_0419 "ribosomal protein L1... 154 3.5e-11 1
TIGR_CMR|SPO_0495 - symbol:SPO_0495 "ribosomal protein L1... 153 4.5e-11 1
CGD|CAL0000733 - symbol:orf19.5684 species:5476 "Candida ... 150 9.4e-11 1
TIGR_CMR|APH_0290 - symbol:APH_0290 "ribosomal protein L1... 150 9.4e-11 1
TIGR_CMR|CPS_0611 - symbol:CPS_0611 "ribosomal protein L1... 149 1.2e-10 1
UNIPROTKB|P0ADY3 - symbol:rplN "50S ribosomal subunit pro... 148 1.5e-10 1
UNIPROTKB|Q9KNZ4 - symbol:rplN "50S ribosomal protein L14... 148 1.5e-10 1
TIGR_CMR|VC_2586 - symbol:VC_2586 "ribosomal protein L14"... 148 1.5e-10 1
UNIPROTKB|J3QQT9 - symbol:RPL23 "60S ribosomal protein L2... 147 2.0e-10 1
TIGR_CMR|SO_0241 - symbol:SO_0241 "ribosomal protein L14"... 137 2.2e-09 1
ASPGD|ASPL0000004926 - symbol:AN6146 species:162425 "Emer... 126 3.3e-08 1
TIGR_CMR|NSE_0276 - symbol:NSE_0276 "ribosomal protein L1... 115 4.8e-07 1
TAIR|locus:2161368 - symbol:AT5G46160 species:3702 "Arabi... 108 2.6e-06 1
DICTYBASE|DDB_G0294066 - symbol:mrpl14 "ribosomal protein... 104 7.0e-06 1
POMBASE|SPBC887.07 - symbol:mrpl38 "mitochondrial ribosom... 102 1.1e-05 1
TAIR|locus:2007913 - symbol:HLL "HUELLENLOS" species:3702... 102 2.0e-05 1
>TAIR|locus:2018309 [details] [associations]
symbol:AT1G04480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/140 (97%), Positives = 140/140 (100%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>TAIR|locus:2051119 [details] [associations]
symbol:AT2G33370 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
EMBL:CP002684 EMBL:CP002686 EMBL:CP002685 GO:GO:0005730
GO:GO:0006412 EMBL:AC000104 GO:GO:0003735 UniGene:At.20792
EMBL:AC002332 EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894 EMBL:AY042843
EMBL:AY054508 EMBL:AY072481 EMBL:AY081677 EMBL:AY086853
EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371 IPI:IPI00524788
PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1 RefSeq:NP_563707.1
UniGene:At.11034 UniGene:At.22254 UniGene:At.28146
ProteinModelPortal:P49690 SMR:P49690 STRING:P49690 PaxDb:P49690
PRIDE:P49690 EnsemblPlants:AT1G04480.1 EnsemblPlants:AT2G33370.1
EnsemblPlants:AT3G04400.1 GeneID:817900 GeneID:819595 GeneID:839511
KEGG:ath:AT1G04480 KEGG:ath:AT2G33370 KEGG:ath:AT3G04400
TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400 InParanoid:P49690
OMA:QRKEYRR PhylomeDB:P49690 ProtClustDB:CLSN2683488
Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/140 (97%), Positives = 140/140 (100%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>TAIR|locus:2100915 [details] [associations]
symbol:emb2171 "embryo defective 2171" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684
EMBL:CP002686 EMBL:CP002685 GO:GO:0005730 GO:GO:0006412
EMBL:AC000104 GO:GO:0003735 UniGene:At.20792 EMBL:AC002332
EMBL:AC022287 GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 EMBL:AY042843 EMBL:AY054508 EMBL:AY072481 EMBL:AY081677
EMBL:AY086853 EMBL:AY088227 EMBL:AY088893 EMBL:Z18477 EMBL:Z18371
IPI:IPI00524788 PIR:F84744 RefSeq:NP_180895.1 RefSeq:NP_187090.1
RefSeq:NP_563707.1 UniGene:At.11034 UniGene:At.22254
UniGene:At.28146 ProteinModelPortal:P49690 SMR:P49690 STRING:P49690
PaxDb:P49690 PRIDE:P49690 EnsemblPlants:AT1G04480.1
EnsemblPlants:AT2G33370.1 EnsemblPlants:AT3G04400.1 GeneID:817900
GeneID:819595 GeneID:839511 KEGG:ath:AT1G04480 KEGG:ath:AT2G33370
KEGG:ath:AT3G04400 TAIR:At1g04480 TAIR:At2g33370 TAIR:At3g04400
InParanoid:P49690 OMA:QRKEYRR PhylomeDB:P49690
ProtClustDB:CLSN2683488 Genevestigator:P49690 Uniprot:P49690
Length = 140
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/140 (97%), Positives = 140/140 (100%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>ZFIN|ZDB-GENE-030131-8756 [details] [associations]
symbol:rpl23 "ribosomal protein L23" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
ZFIN:ZDB-GENE-030131-8756 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:BC049038 EMBL:BC059509
IPI:IPI00481155 RefSeq:NP_957026.1 UniGene:Dr.30814
ProteinModelPortal:Q6PC14 STRING:Q6PC14 PRIDE:Q6PC14
Ensembl:ENSDART00000075495 GeneID:336812 KEGG:dre:336812
InParanoid:Q6PC14 NextBio:20811915 Bgee:Q6PC14 Uniprot:Q6PC14
Length = 140
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 119/139 (85%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|Q3T057 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:BC102556
EMBL:BC148014 IPI:IPI00695041 RefSeq:NP_001030186.1
UniGene:Bt.48897 ProteinModelPortal:Q3T057 SMR:Q3T057 STRING:Q3T057
PRIDE:Q3T057 Ensembl:ENSBTAT00000004190 GeneID:504876
KEGG:bta:504876 CTD:9349 HOVERGEN:HBG000282 InParanoid:Q3T057
OrthoDB:EOG4CRM1G NextBio:20866877 Uniprot:Q3T057
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|F2Z4P3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AAEX03006484
ProteinModelPortal:F2Z4P3 SMR:F2Z4P3 PRIDE:F2Z4P3
Ensembl:ENSCAFT00000026221 Uniprot:F2Z4P3
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|P62829 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0005730 "nucleolus" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0005840
"ribosome" evidence=NAS] [GO:0006610 "ribosomal protein import into
nucleus" evidence=NAS] [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 EMBL:X52839 Reactome:REACT_116125
GO:GO:0005730 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 GO:GO:0006610 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
OMA:QRKEYRR CTD:9349 HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G
ChiTaRS:RpL23 EMBL:X55954 EMBL:AB061827 EMBL:BC010114 EMBL:BC062716
EMBL:BC104651 EMBL:BC106061 IPI:IPI00010153 PIR:S18815
RefSeq:NP_000969.1 UniGene:Hs.406300 ProteinModelPortal:P62829
SMR:P62829 IntAct:P62829 MINT:MINT-5001181 STRING:P62829
PhosphoSite:P62829 DMDM:51338639 SWISS-2DPAGE:P62829 PaxDb:P62829
PRIDE:P62829 Ensembl:ENST00000394332 Ensembl:ENST00000479035
GeneID:9349 KEGG:hsa:9349 UCSC:uc002hqx.1 GeneCards:GC17M037005
HGNC:HGNC:10316 HPA:HPA003373 MIM:603662 neXtProt:NX_P62829
PharmGKB:PA34690 InParanoid:P62829 PhylomeDB:P62829 GenomeRNAi:9349
NextBio:35009 ArrayExpress:P62829 Bgee:P62829 CleanEx:HS_RPL23
Genevestigator:P62829 GermOnline:ENSG00000125691 Uniprot:P62829
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|P62831 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 EMBL:F14853 EMBL:DQ629166 RefSeq:NP_001123427.1
UniGene:Ssc.53748 ProteinModelPortal:P62831 SMR:P62831 PRIDE:P62831
Ensembl:ENSSSCT00000030349 GeneID:414398 KEGG:ssc:414398
Uniprot:P62831
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>MGI|MGI:1929455 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0022626
"cytosolic ribosome" evidence=ISA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 MGI:MGI:1929455 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 GO:GO:0022626 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 KO:K02894
GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G ChiTaRS:RpL23 EMBL:AF158022
EMBL:AF287271 EMBL:AK002579 EMBL:AK010680 EMBL:AK012694
EMBL:AK018730 EMBL:AK150671 EMBL:AK168133 EMBL:BC025918
EMBL:BC081448 IPI:IPI00139780 RefSeq:NP_075029.1
RefSeq:XP_003688806.1 RefSeq:XP_003689266.1 UniGene:Mm.140380
ProteinModelPortal:P62830 SMR:P62830 IntAct:P62830 STRING:P62830
PaxDb:P62830 PRIDE:P62830 Ensembl:ENSMUST00000103146
GeneID:100044627 GeneID:100862455 GeneID:65019 KEGG:mmu:100044627
KEGG:mmu:100862455 KEGG:mmu:65019 InParanoid:P62830 NextBio:320251
Bgee:P62830 CleanEx:MM_RPL23 Genevestigator:P62830
GermOnline:ENSMUSG00000071415 Uniprot:P62830
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>RGD|62067 [details] [associations]
symbol:Rpl23 "ribosomal protein L23" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 RGD:62067
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
HOVERGEN:HBG000282 OrthoDB:EOG4CRM1G EMBL:X58200 EMBL:BC058500
IPI:IPI00207980 PIR:JH0418 RefSeq:NP_001007600.1 UniGene:Rn.103172
ProteinModelPortal:P62832 SMR:P62832 IntAct:P62832 STRING:P62832
PhosphoSite:P62832 PRIDE:P62832 Ensembl:ENSRNOT00000005471
GeneID:29282 KEGG:rno:29282 UCSC:RGD:62067 InParanoid:P62832
NextBio:608657 Genevestigator:P62832 GermOnline:ENSRNOG00000004107
Uniprot:P62832
Length = 140
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|J9P897 [details] [associations]
symbol:J9P897 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 GeneTree:ENSGT00390000004690
EMBL:AAEX03005517 Ensembl:ENSCAFT00000016692 OMA:YAKIGST
Uniprot:J9P897
Length = 140
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 117/139 (84%), Positives = 128/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDN GVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNTGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>UNIPROTKB|Q9XSU3 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:NOG291117 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 HOGENOM:HOG000183703 KO:K02894 CTD:9349
HOVERGEN:HBG000282 EMBL:AJ388521 RefSeq:NP_001003100.1
UniGene:Cfa.3547 PRIDE:Q9XSU3 GeneID:403683 KEGG:cfa:403683
NextBio:20817187 Uniprot:Q9XSU3
Length = 140
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 117/139 (84%), Positives = 127/139 (91%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWP IAS A +I
Sbjct: 121 VXKECADLWPXIASNAGSI 139
>FB|FBgn0010078 [details] [associations]
symbol:RpL23 "Ribosomal protein L23" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 EMBL:AE013599
GO:GO:0022008 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02894 GeneTree:ENSGT00390000004690 OMA:QRKEYRR CTD:9349
EMBL:M85295 EMBL:BT053700 PIR:JC1253 RefSeq:NP_523813.1
UniGene:Dm.6664 ProteinModelPortal:P48159 SMR:P48159 DIP:DIP-21429N
IntAct:P48159 MINT:MINT-943050 STRING:P48159 PaxDb:P48159
EnsemblMetazoa:FBtr0071897 GeneID:37628 KEGG:dme:Dmel_CG3661
FlyBase:FBgn0010078 InParanoid:P48159 OrthoDB:EOG437PX9
PhylomeDB:P48159 ChiTaRS:RpL23 GenomeRNAi:37628 NextBio:804633
Bgee:P48159 GermOnline:CG3661 Uniprot:P48159
Length = 140
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 113/139 (81%), Positives = 130/139 (93%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG+AG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A++I
Sbjct: 121 VAKECADLWPRIASNASSI 139
>UNIPROTKB|E1BY89 [details] [associations]
symbol:RPL23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
GeneTree:ENSGT00390000004690 OMA:QRKEYRR EMBL:AADN02022227
EMBL:AADN02022228 IPI:IPI00598304 Ensembl:ENSGALT00000002496
NextBio:20822975 Uniprot:E1BY89
Length = 140
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 116/139 (83%), Positives = 127/139 (91%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A + ADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVIKGADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>POMBASE|SPAC3G9.03 [details] [associations]
symbol:rpl2301 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 PomBase:SPCC1322.11 PomBase:SPAC3G9.03 GO:GO:0005739
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703
KO:K02894 PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 106/137 (77%), Positives = 122/137 (89%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+A
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLA 62
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGK 123
TVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ K
Sbjct: 63 TVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAK 122
Query: 124 ECADLWPRIASAANAIV 140
ECADLWPRIAS A +V
Sbjct: 123 ECADLWPRIASNAGTVV 139
>POMBASE|SPCC1322.11 [details] [associations]
symbol:rpl2302 "60S ribosomal protein L23" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 PomBase:SPCC1322.11
PomBase:SPAC3G9.03 GO:GO:0005739 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 eggNOG:COG0093 HOGENOM:HOG000183703 KO:K02894
PIR:T11639 RefSeq:NP_588139.1 RefSeq:NP_594075.1
ProteinModelPortal:O42867 SMR:O42867 STRING:O42867 PRIDE:O42867
EnsemblFungi:SPAC3G9.03.1 EnsemblFungi:SPCC1322.11.1 GeneID:2539286
GeneID:2543453 KEGG:spo:SPAC3G9.03 KEGG:spo:SPCC1322.11 OMA:NCFTRIT
OrthoDB:EOG4H1F56 NextBio:20800453 Uniprot:O42867
Length = 139
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 106/137 (77%), Positives = 122/137 (89%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+A
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLA 62
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGK 123
TVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ K
Sbjct: 63 TVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAK 122
Query: 124 ECADLWPRIASAANAIV 140
ECADLWPRIAS A +V
Sbjct: 123 ECADLWPRIASNAGTVV 139
>WB|WBGene00004435 [details] [associations]
symbol:rpl-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
InterPro:IPR001610 GO:GO:0009792 GO:GO:0040007 GO:GO:0007165
GO:GO:0002119 GO:GO:0006355 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 SMART:SM00086
EMBL:FO080138 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
HOGENOM:HOG000183703 KO:K02894 GeneTree:ENSGT00390000004690
OMA:QRKEYRR PIR:T15337 RefSeq:NP_498231.1 ProteinModelPortal:P48158
SMR:P48158 DIP:DIP-27299N IntAct:P48158 MINT:MINT-213738
STRING:P48158 PaxDb:P48158 EnsemblMetazoa:B0336.10.1
EnsemblMetazoa:B0336.10.2 EnsemblMetazoa:B0336.10.3 GeneID:175796
KEGG:cel:CELE_B0336.10 UCSC:B0336.10.2 CTD:175796 WormBase:B0336.10
InParanoid:P48158 NextBio:889716 Uniprot:P48158
Length = 140
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 106/139 (76%), Positives = 124/139 (89%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++ISV GI+GRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+ +VKKGKP+LRKKV+ V++RQRK +RRKDG F+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIA+ A +I
Sbjct: 121 VAKECADLWPRIAANAGSI 139
>ASPGD|ASPL0000077643 [details] [associations]
symbol:AN4494 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BN001303 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049
HOGENOM:HOG000183703 OMA:QRKEYRR EnsemblFungi:CADANIAT00005951
Uniprot:C8V8E0
Length = 140
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 106/139 (76%), Positives = 122/139 (87%)
Query: 2 SKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMV 61
SKRGRG AGNK +M+LGLP A +NC DN+GA+NLYIISVKGI RLNRLP+A VGDMV
Sbjct: 3 SKRGRG-VAGNKLKMTLGLPCGAVLNCCDNSGARNLYIISVKGIGARLNRLPAAGVGDMV 61
Query: 62 MATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPI 121
MATVKKGKP+LRKKVMPAV+VRQ KPWRR DG+++YFEDNAGVIVN KGEMKGSAITGP+
Sbjct: 62 MATVKKGKPELRKKVMPAVVVRQSKPWRRPDGIYLYFEDNAGVIVNAKGEMKGSAITGPV 121
Query: 122 GKECADLWPRIASAANAIV 140
GKE A+LWPRIAS + ++
Sbjct: 122 GKEAAELWPRIASNSGVVM 140
>SGD|S000000183 [details] [associations]
symbol:RPL23A "Ribosomal 60S subunit protein L23A"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0002181 "cytoplasmic translation"
evidence=TAS] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000183 EMBL:BK006936 GO:GO:0003735 GO:GO:0002181
EMBL:X79489 PDB:4B6A PDBsum:4B6A PDB:3J16 PDBsum:3J16 GO:GO:0022625
PDB:2X7N PDBsum:2X7N Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I EMBL:X01694 EMBL:Z35848 PIR:A02792 RefSeq:NP_009466.1
RefSeq:NP_011042.3 RefSeq:NP_011047.3 ProteinModelPortal:P0CX41
SMR:P0CX41 EnsemblFungi:YBL087C EnsemblFungi:YER117W GeneID:852191
GeneID:856853 GeneID:856858 KEGG:sce:YBL087C KEGG:sce:YER117W
KEGG:sce:YER121W CYGD:YBL087c HOGENOM:HOG000183703 KO:K02894
EvolutionaryTrace:P0CX41 NextBio:970670 ArrayExpress:P0CX41
GermOnline:YBL087C Uniprot:P0CX41
Length = 137
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 102/133 (76%), Positives = 119/133 (89%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 127
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 LWPRIASAANAIV 140
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>SGD|S000000919 [details] [associations]
symbol:RPL23B "Ribosomal 60S subunit protein L23B"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
SGD:S000000919 EMBL:BK006939 GO:GO:0003735 GO:GO:0002181
EMBL:U18916 EMBL:U15653 GO:GO:0022625 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
PROSITE:PS00049 PIR:A02792 RefSeq:NP_009466.1 RefSeq:NP_011042.3
RefSeq:NP_011047.3 EnsemblFungi:YBL087C EnsemblFungi:YER117W
GeneID:852191 GeneID:856853 GeneID:856858 KEGG:sce:YBL087C
KEGG:sce:YER117W KEGG:sce:YER121W KO:K02894 NextBio:970670
ProteinModelPortal:P0CX42 SMR:P0CX42 CYGD:YER117w
GeneTree:ENSGT00390000004690 ArrayExpress:P0CX42 GermOnline:YER117W
Uniprot:P0CX42
Length = 137
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 102/133 (76%), Positives = 119/133 (89%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 127
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 LWPRIASAANAIV 140
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>UNIPROTKB|G3MY15 [details] [associations]
symbol:G3MY15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193
GeneTree:ENSGT00390000004690 EMBL:DAAA02008675
Ensembl:ENSBTAT00000064605 OMA:PIAKECA Uniprot:G3MY15
Length = 132
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 100/131 (76%), Positives = 114/131 (87%)
Query: 9 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68
S+G K+R+SLGLPV A +NCADNTGAKNLYIISVKGIK +LNRL +A VGDMVMATVKKG
Sbjct: 1 SSGAKYRISLGLPVGAVINCADNTGAKNLYIISVKGIKVQLNRLSAAGVGDMVMATVKKG 60
Query: 69 KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128
KP+LRKK V++RQRK +RR+DGVF+YFEDNAGV VN KGEMKGSAITGPI KECA L
Sbjct: 61 KPELRKKEHLTVVIRQRKSYRREDGVFLYFEDNAGVTVNNKGEMKGSAITGPIAKECAGL 120
Query: 129 WPRIASAANAI 139
WP IAS A++I
Sbjct: 121 WPGIASNASSI 131
>UNIPROTKB|J3KT29 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 ChiTaRS:RpL23 HGNC:HGNC:10316
EMBL:AC110749 ProteinModelPortal:J3KT29 Ensembl:ENST00000577407
Uniprot:J3KT29
Length = 122
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 98/114 (85%), Positives = 107/114 (93%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKG 114
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKG
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKG 114
>DICTYBASE|DDB_G0290315 [details] [associations]
symbol:rpl23 "S60 ribosomal protein L23"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 dictyBase:DDB_G0290315
GO:GO:0006412 GenomeReviews:CM000154_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000162 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093 KO:K02894
OMA:QRKEYRR RefSeq:XP_635797.1 HSSP:P22450
ProteinModelPortal:Q54G86 SMR:Q54G86 STRING:Q54G86
EnsemblProtists:DDB0230148 GeneID:8627602 KEGG:ddi:DDB_G0290315
ProtClustDB:PTZ00054 Uniprot:Q54G86
Length = 136
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 93/132 (70%), Positives = 115/132 (87%)
Query: 9 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68
+ G+ +R+SLGLPV A +N ADN+GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATVKKG
Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKG 65
Query: 69 KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128
KP+LRKKV ++VRQRK W+RKDGV++YFEDNAGV+ NPKGE+KG+ I GP+ KEC+DL
Sbjct: 66 KPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDL 124
Query: 129 WPRIASAANAIV 140
WP++A+ A IV
Sbjct: 125 WPKVATNAGTIV 136
>RGD|2318559 [details] [associations]
symbol:LOC100362226 "ribosomal protein L23-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 RGD:2318559 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 GeneTree:ENSGT00390000004690 IPI:IPI00388644
Ensembl:ENSRNOT00000032589 Uniprot:F1LWL3
Length = 140
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 93/136 (68%), Positives = 112/136 (82%)
Query: 3 KRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVM 62
K+ RGGS+G KFR+SLGL V A +N AD+TG KN+YIISVK IKGRL+RLP+A VG MVM
Sbjct: 3 KQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVM 62
Query: 63 ATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIG 122
ATV+K +P LRKKV PA+++RQ+K RKDGV +YFE++A VIVN KG+MKGSAITGPI
Sbjct: 63 ATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIA 122
Query: 123 KECADLWPRIASAANA 138
KE AD WPRIAS A +
Sbjct: 123 KEHADSWPRIASNAGS 138
>UNIPROTKB|F1M637 [details] [associations]
symbol:F1M637 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193
IPI:IPI00393748 Ensembl:ENSRNOT00000031239 Uniprot:F1M637
Length = 129
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/122 (72%), Positives = 101/122 (82%)
Query: 18 LGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVM 77
LGLP+ A +N ADNTGAK+LYIISV GIKG+LNRLP+A VGD+VMATVKKGKP+LRKKV
Sbjct: 14 LGLPLRAVINSADNTGAKDLYIISVNGIKGQLNRLPAAGVGDLVMATVKKGKPELRKKVH 73
Query: 78 PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 137
PAV +R RKDGVF+YFEDNAG IVN K +MKGS ITGP+ +ECADLW RIAS+A
Sbjct: 74 PAVAIR------RKDGVFLYFEDNAGAIVNNK-KMKGSTITGPLARECADLWSRIASSAG 126
Query: 138 AI 139
I
Sbjct: 127 TI 128
>UNIPROTKB|C9JD32 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005737
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20
PANTHER:PTHR11761 SUPFAM:SSF50193 ChiTaRS:RpL23 HGNC:HGNC:10316
EMBL:AC110749 IPI:IPI00795751 ProteinModelPortal:C9JD32 SMR:C9JD32
STRING:C9JD32 PRIDE:C9JD32 Ensembl:ENST00000378096
ArrayExpress:C9JD32 Bgee:C9JD32 Uniprot:C9JD32
Length = 91
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 69/81 (85%), Positives = 76/81 (93%)
Query: 6 RGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATV 65
RGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATV
Sbjct: 10 RGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATV 69
Query: 66 KKGKPDLRKKVMPAVIVRQRK 86
KKGKP+LRKKV PAV++RQRK
Sbjct: 70 KKGKPELRKKVHPAVVIRQRK 90
>UNIPROTKB|J3KTJ3 [details] [associations]
symbol:RPL23 "Ribosomal protein L23, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238
GO:GO:0006412 EMBL:CH471152 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 PROSITE:PS00049 ChiTaRS:RpL23 UniGene:Hs.406300
HGNC:HGNC:10316 EMBL:AC110749 ProteinModelPortal:J3KTJ3
Ensembl:ENST00000245857 Uniprot:J3KTJ3
Length = 81
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 67/80 (83%), Positives = 74/80 (92%)
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 119
MVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITG
Sbjct: 1 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITG 60
Query: 120 PIGKECADLWPRIASAANAI 139
P+ KECADLWPRIAS A +I
Sbjct: 61 PVAKECADLWPRIASNAGSI 80
>UNIPROTKB|B9ZVP7 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000218 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.150.20 PANTHER:PTHR11761 SUPFAM:SSF50193 ChiTaRS:RpL23
HGNC:HGNC:10316 EMBL:AC110749 IPI:IPI00794091
ProteinModelPortal:B9ZVP7 SMR:B9ZVP7 STRING:B9ZVP7 PRIDE:B9ZVP7
Ensembl:ENST00000394333 ArrayExpress:B9ZVP7 Bgee:B9ZVP7
Uniprot:B9ZVP7
Length = 114
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 67/77 (87%), Positives = 73/77 (94%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVM 77
VMATVKKGKP+LRKKV+
Sbjct: 61 VMATVKKGKPELRKKVL 77
>TIGR_CMR|DET_0484 [details] [associations]
symbol:DET_0484 "ribosomal protein L14" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 OMA:KQFMKIV
RefSeq:YP_181228.1 ProteinModelPortal:Q3Z971 SMR:Q3Z971
STRING:Q3Z971 PRIDE:Q3Z971 GeneID:3230137 KEGG:det:DET0484
PATRIC:21608037 BioCyc:DETH243164:GJNF-484-MONOMER Uniprot:Q3Z971
Length = 122
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 52/119 (43%), Positives = 74/119 (62%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIV 82
+N ADNTGAK + I+V G +L A VGD+++A VKK PD + K V+ AV+V
Sbjct: 8 LNVADNTGAKKIMCINVLGGSRKLQ----AKVGDVIVAAVKKSSPDAQAKSGTVVKAVVV 63
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
R KP+ R DG ++ F+DNA VI+N K E KG+ I GP+ +E D + +I S A ++
Sbjct: 64 RITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRDKKFTKILSLAPEVL 122
>TIGR_CMR|CHY_2299 [details] [associations]
symbol:CHY_2299 "ribosomal protein L14" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 OMA:KQFMKIV
RefSeq:YP_361108.1 ProteinModelPortal:Q3A9S6 SMR:Q3A9S6
STRING:Q3A9S6 GeneID:3727104 KEGG:chy:CHY_2299 PATRIC:21277669
BioCyc:CHYD246194:GJCN-2298-MONOMER Uniprot:Q3A9S6
Length = 122
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 46/125 (36%), Positives = 74/125 (59%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD--LRK-KV 76
+ V +N ADNTGAK L I V G G R S +GD+++ +VK+ PD ++K +V
Sbjct: 2 IQVQTILNSADNTGAKKLMCIRVLG--GSNRRYAS--LGDIIVCSVKEATPDAVVKKGEV 57
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASA 135
+ AV+VR +K RR DG ++ F++NA VI+ +G+ I GP+ +E + + +I S
Sbjct: 58 VKAVVVRTKKEVRRPDGTYIKFDENAAVIIKDDKSPRGTRIFGPVARELREKDFMKIISL 117
Query: 136 ANAIV 140
A ++
Sbjct: 118 APEVL 122
>UNIPROTKB|P66069 [details] [associations]
symbol:rplN "50S ribosomal protein L14" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842574 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 OMA:KQFMKIV
PIR:E70643 RefSeq:NP_215228.1 RefSeq:NP_335159.1
RefSeq:YP_006514058.1 ProteinModelPortal:P66069 SMR:P66069
PRIDE:P66069 EnsemblBacteria:EBMYCT00000003180
EnsemblBacteria:EBMYCT00000070549 GeneID:13318603 GeneID:888411
GeneID:926032 KEGG:mtc:MT0741 KEGG:mtu:Rv0714 KEGG:mtv:RVBD_0714
PATRIC:18123361 TubercuList:Rv0714 Uniprot:P66069
Length = 122
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 46/116 (39%), Positives = 68/116 (58%)
Query: 29 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQR 85
ADNTGAK + I V G G R A +GD+++ATVK P R V+ AV+VR
Sbjct: 11 ADNTGAKEILCIRVLG--GSSRRY--AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTV 66
Query: 86 KPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
K RR DG ++ F++NA VI+ P + +G+ I GP+G+E + + +I S A ++
Sbjct: 67 KERRRPDGSYIKFDENAAVIIKPDNDPRGTRIFGPVGRELREKRFMKIISLAPEVL 122
>UNIPROTKB|P0C438 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
EMBL:AY522331 GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 ProteinModelPortal:P0C438 SMR:P0C438 PRIDE:P0C438
Gramene:P0C438 HOGENOM:HOG000183702 Genevestigator:P0C438
Uniprot:P0C438
Length = 123
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/119 (36%), Positives = 71/119 (59%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 82
+N ADN+GA+ L I V G R A +GD+++A +K P + R +V+ AVIV
Sbjct: 8 LNVADNSGARKLMCIRVIGAASN-QRY--ARIGDVIVAVIKDAVPQMPLERSEVIRAVIV 64
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
R K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L + +I S A ++
Sbjct: 65 RTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLAPEVL 123
>UNIPROTKB|P0C439 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:AY522329 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00057 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
RefSeq:YP_654240.1 ProteinModelPortal:P0C439 SMR:P0C439
PRIDE:P0C439 GeneID:4126930 Gramene:P0C439 Uniprot:P0C439
Length = 123
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/119 (36%), Positives = 71/119 (59%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 82
+N ADN+GA+ L I V G R A +GD+++A +K P + R +V+ AVIV
Sbjct: 8 LNVADNSGARKLMCIRVIGAASN-QRY--ARIGDVIVAVIKDAVPQMPLERSEVIRAVIV 64
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
R K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L + +I S A ++
Sbjct: 65 RTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLAPEVL 123
>UNIPROTKB|P0C440 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00057 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049 PIR:JQ0263
RefSeq:NP_001174324.1 RefSeq:NP_039422.1 UniGene:Os.100227
ProteinModelPortal:P0C440 SMR:P0C440 STRING:P0C440
EnsemblPlants:LOC_Os01g57956.1 EnsemblPlants:LOC_Os04g16828.1
EnsemblPlants:LOC_Os05g22722.1 EnsemblPlants:LOC_Os08g15276.1
EnsemblPlants:LOC_Os10g21342.1 EnsemblPlants:LOC_Osp1g00710.1
GeneID:3131422 GeneID:9272666 KEGG:osa:3131422 KEGG:osa:9272666
Gramene:P0C440 eggNOG:COG0093 KO:K02874 OMA:MPVKKSD Uniprot:P0C440
Length = 123
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/119 (36%), Positives = 71/119 (59%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 82
+N ADN+GA+ L I V G R A +GD+++A +K P + R +V+ AVIV
Sbjct: 8 LNVADNSGARKLMCIRVIGAASN-QRY--ARIGDVIVAVIKDAVPQMPLERSEVIRAVIV 64
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
R K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L + +I S A ++
Sbjct: 65 RTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLAPEVL 123
>UNIPROTKB|Q6END7 [details] [associations]
symbol:rpl14 "50S ribosomal protein L14, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 EMBL:AP006728 GO:GO:0015934
RefSeq:YP_052786.1 ProteinModelPortal:Q6END7 SMR:Q6END7
GeneID:2885958 Gramene:Q6END7 ProtClustDB:CHL00057
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 Uniprot:Q6END7
Length = 123
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 43/119 (36%), Positives = 71/119 (59%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 82
+N ADN+GA+ L I V G R A +GD+++A +K P + R +V+ AVIV
Sbjct: 8 LNVADNSGARKLMCIRVIGAASN-QRY--ARIGDVIVAVIKDAVPQMPLERSEVIRAVIV 64
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
R K ++ +DG+ + ++DNA VI++ KG KG+ + G I +E +L + +I S A ++
Sbjct: 65 RTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAIAEELRELNFTKIVSLAPEVL 123
>TIGR_CMR|CJE_1865 [details] [associations]
symbol:CJE_1865 "ribosomal protein L14" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
PIR:E81267 RefSeq:YP_179835.1 ProteinModelPortal:Q5HSA0 SMR:Q5HSA0
STRING:Q5HSA0 GeneID:3232492 KEGG:cjr:CJE1865 PATRIC:20045562
BioCyc:CJEJ195099:GJC0-1904-MONOMER Uniprot:Q5HSA0
Length = 122
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 44/99 (44%), Positives = 64/99 (64%)
Query: 29 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD--LRK-KVMPAVIVRQR 85
ADN+GAK L I V G G R A VGD+++A+VKK P+ ++K +V+ AVIVR +
Sbjct: 11 ADNSGAKELMCIKVLG--GSKRRY--ATVGDVIVASVKKALPNGKVKKGQVVKAVIVRTK 66
Query: 86 KPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
K R +G + F++NA VI++ K E G+ I GP+G+E
Sbjct: 67 KEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGRE 105
>TIGR_CMR|GSU_2847 [details] [associations]
symbol:GSU_2847 "ribosomal protein L14" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:NP_953890.1
ProteinModelPortal:Q748Z8 SMR:Q748Z8 GeneID:2687151
KEGG:gsu:GSU2847 PATRIC:22028541
BioCyc:GSUL243231:GH27-2813-MONOMER Uniprot:Q748Z8
Length = 122
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 44/125 (35%), Positives = 73/125 (58%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---V 76
+ + ++ ADN+GAK L+ I V G G + A VGD+V+ +V++ P+ + K V
Sbjct: 2 IQMQTVLDVADNSGAKKLFCIKVLG--GSKRKY--AGVGDIVVCSVREAVPNAKVKKGDV 57
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC-ADLWPRIASA 135
+ VIVR K R DG ++ F+DN+GV++N + E G+ I GP+ +E A + +I S
Sbjct: 58 VKVVIVRTAKEIGRPDGSYIRFDDNSGVVINNQREPVGTRIFGPVARELRAQKFMKIISL 117
Query: 136 ANAIV 140
A ++
Sbjct: 118 APEVL 122
>TIGR_CMR|BA_0120 [details] [associations]
symbol:BA_0120 "ribosomal protein L14" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483 RefSeq:NP_842688.1
RefSeq:YP_016725.1 RefSeq:YP_026406.1 HSSP:P04450
ProteinModelPortal:Q81VS0 SMR:Q81VS0 DNASU:1087270
EnsemblBacteria:EBBACT00000013244 EnsemblBacteria:EBBACT00000013820
EnsemblBacteria:EBBACT00000023430 GeneID:1087270 GeneID:2819213
GeneID:2852443 KEGG:ban:BA_0120 KEGG:bar:GBAA_0120 KEGG:bat:BAS0120
OMA:KQFMKIV BioCyc:BANT260799:GJAJ-131-MONOMER
BioCyc:BANT261594:GJ7F-133-MONOMER Uniprot:Q81VS0
Length = 122
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 44/116 (37%), Positives = 68/116 (58%)
Query: 29 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD-LRKK--VMPAVIVRQR 85
ADN+GA+ L I V G GR A +GD+++ATVK+ P + KK V+ AV+VR +
Sbjct: 11 ADNSGARELLTIKVLGGSGR----KYANIGDIIVATVKQATPGGVVKKGDVVKAVVVRTK 66
Query: 86 KPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 140
RR DG ++ F++NA VI+ +G+ I GP+ +E D + +I S A ++
Sbjct: 67 SGARRPDGSYIKFDENAAVIIKDDKSPRGTRIFGPVARELRDSNFMKIVSLAPEVL 122
>TIGR_CMR|CBU_0248 [details] [associations]
symbol:CBU_0248 "ribosomal protein L14" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
RefSeq:NP_819292.1 ProteinModelPortal:Q83ER6 SMR:Q83ER6
GeneID:1208129 KEGG:cbu:CBU_0248 PATRIC:17929189
BioCyc:CBUR227377:GJ7S-254-MONOMER Uniprot:Q83ER6
Length = 122
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 42/115 (36%), Positives = 68/115 (59%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIV 82
V+ ADN+GA+ + I V G G R A +GD++ ++K+ P + K VM AV+V
Sbjct: 8 VDVADNSGARRVMCIKVLG--GSKRRY--ANIGDVIKVSIKEAIPRGKVKKGDVMHAVVV 63
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC-ADLWPRIASAA 136
R RK RR DG + F++NA V++N + ++ G+ + GP+ +E D + +I S A
Sbjct: 64 RTRKGVRRNDGSLIRFDNNAVVLLNNQLQLVGTRVFGPVVRELRTDKFMKIISLA 118
>TIGR_CMR|ECH_0419 [details] [associations]
symbol:ECH_0419 "ribosomal protein L14" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 OMA:MPVKKSD
ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 RefSeq:YP_507237.1
ProteinModelPortal:Q2GH46 SMR:Q2GH46 STRING:Q2GH46 GeneID:3927770
KEGG:ech:ECH_0419 PATRIC:20576315
BioCyc:ECHA205920:GJNR-420-MONOMER Uniprot:Q2GH46
Length = 119
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 43/115 (37%), Positives = 65/115 (56%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVK----KGKPDLRKKVMPAVI 81
++ ADN+GA+ + I G LN SA VGD+++ + K +GK + KV AVI
Sbjct: 8 LDVADNSGARKVLCI------GLLNGKKSASVGDVIVVSTKLITPRGKVS-KGKVYKAVI 60
Query: 82 VRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
VR +K RR DG + F NA V++N +G+ G+ + GPI K L+ ++ S A
Sbjct: 61 VRVKKAVRRLDGSVIKFSSNAVVLINDQGDPLGTRVFGPIKKLPFGLFSKVMSLA 115
>TIGR_CMR|SPO_0495 [details] [associations]
symbol:SPO_0495 "ribosomal protein L14" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:YP_165757.1
ProteinModelPortal:Q5LW48 SMR:Q5LW48 GeneID:3195401
KEGG:sil:SPO0495 PATRIC:23374251 Uniprot:Q5LW48
Length = 122
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 44/125 (35%), Positives = 69/125 (55%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---V 76
+ + ++ ADN+GA+ + I V G G + S VGD+++ +VK+ P R K V
Sbjct: 2 IQMQTNLDVADNSGARRVQCIKVLG--GSKRKYAS--VGDIIVVSVKEAIPRGRVKKGDV 57
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC-ADLWPRIASA 135
AV+VR K RR+DG + F+ NA VI+N E G+ I GP+ +E A + +I S
Sbjct: 58 RKAVVVRTAKEVRREDGTAIRFDRNAAVILNNNNEPVGTRIFGPVVRELRAKNFMKIISL 117
Query: 136 ANAIV 140
A ++
Sbjct: 118 APEVL 122
>CGD|CAL0000733 [details] [associations]
symbol:orf19.5684 species:5476 "Candida albicans" [GO:0005762
"mitochondrial large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 CGD:CAL0000733 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093
EMBL:AACQ01000261 RefSeq:XP_710513.1 ProteinModelPortal:Q59LB5
STRING:Q59LB5 GeneID:3647881 KEGG:cal:CaO19.5684 Uniprot:Q59LB5
Length = 132
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 43/127 (33%), Positives = 67/127 (52%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSAC--VGDMVMATVKKGKP---DL-------- 72
+N DN+GA+ + I V L P +C +GD + VK+ +P +L
Sbjct: 8 LNVIDNSGAQVVECIKV------LRHKPKSCAQIGDRITCVVKQARPLQQELTGQSSTNR 61
Query: 73 --RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-W 129
R+ + AV+VR R P +RKDG + F+DNA V++N GE G+ I+ + KE DL +
Sbjct: 62 VKRRDICQAVVVRTRAPLKRKDGSVVRFDDNACVLINKNGEPLGTRISSVVAKELKDLNY 121
Query: 130 PRIASAA 136
+I + A
Sbjct: 122 NKIVALA 128
>TIGR_CMR|APH_0290 [details] [associations]
symbol:APH_0290 "ribosomal protein L14" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874
OMA:MPVKKSD RefSeq:YP_504902.1 ProteinModelPortal:Q2GL49 SMR:Q2GL49
STRING:Q2GL49 GeneID:3930314 KEGG:aph:APH_0290 PATRIC:20949154
ProtClustDB:PRK05483 BioCyc:APHA212042:GHPM-320-MONOMER
PANTHER:PTHR11761:SF3 Uniprot:Q2GL49
Length = 119
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 42/116 (36%), Positives = 62/116 (53%)
Query: 24 ATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK---KVMPAV 80
A ++ ADN+GA+ + I G K SA VGD+++ + K P R KV AV
Sbjct: 6 AILDVADNSGARKVLCIGFLGGK------KSATVGDVIVVSAKVAAPKGRVTKGKVYKAV 59
Query: 81 IVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 136
IVR + P RR DG + F NA V+VN +G+ G+ + GP+ K + ++ S A
Sbjct: 60 IVRVKGPIRRLDGSIIRFSSNAVVLVNDQGDPLGTRVFGPVRKFPVGEFTKVMSLA 115
>TIGR_CMR|CPS_0611 [details] [associations]
symbol:CPS_0611 "ribosomal protein L14" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702
eggNOG:COG0093 KO:K02874 PANTHER:PTHR11761:SF3 OMA:KQFMKIV
RefSeq:YP_267361.1 ProteinModelPortal:Q489A3 SMR:Q489A3
STRING:Q489A3 PRIDE:Q489A3 GeneID:3522240 KEGG:cps:CPS_0611
PATRIC:21464549 BioCyc:CPSY167879:GI48-698-MONOMER Uniprot:Q489A3
Length = 122
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---V 76
+ + + +N ADN+GAK + I V G G R A +GD++ VK+ P + K V
Sbjct: 2 IQMQSQLNVADNSGAKRVQCIKVLG--GSHRRY--ARIGDIIKVAVKEASPRGKVKKGDV 57
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECA-DLWPRIASA 135
AV+VR +K RR DG + F++NA V++N + G+ I GP+ +E + + +I S
Sbjct: 58 HTAVVVRTKKGVRRTDGSAIRFDENAAVMLNANLQPIGTRIFGPVTRELRNEKFMKIVSL 117
Query: 136 ANAIV 140
A ++
Sbjct: 118 APEVL 122
>UNIPROTKB|P0ADY3 [details] [associations]
symbol:rplN "50S ribosomal subunit protein L14"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0070180 "LSU rRNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 EMBL:X01563
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 PDB:2RDO PDBsum:2RDO Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 PDB:3J0T PDB:3J0W
PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2WWQ
PDB:2Z4L PDB:2Z4N PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D
PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3E1B PDBsum:3E1D
PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:487D PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 OMA:KQFMKIV EMBL:V00357 PIR:A65124
RefSeq:NP_417769.1 RefSeq:YP_492122.1 ProteinModelPortal:P0ADY3
SMR:P0ADY3 DIP:DIP-35798N IntAct:P0ADY3 MINT:MINT-1304553
PaxDb:P0ADY3 PRIDE:P0ADY3 EnsemblBacteria:EBESCT00000001428
EnsemblBacteria:EBESCT00000014678 GeneID:12934392 GeneID:947809
KEGG:ecj:Y75_p3866 KEGG:eco:b3310 PATRIC:32122052 EchoBASE:EB0868
EcoGene:EG10875 BioCyc:EcoCyc:EG10875-MONOMER
BioCyc:ECOL316407:JW3272-MONOMER EvolutionaryTrace:P0ADY3
Genevestigator:P0ADY3 Uniprot:P0ADY3
Length = 123
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 43/120 (35%), Positives = 68/120 (56%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIV 82
+N ADN+GA+ + I V G G R A VGD++ T+K+ P + K V+ AV+V
Sbjct: 8 LNVADNSGARRVMCIKVLG--GSHRRY--AGVGDIIKITIKEAIPRGKVKKGDVLKAVVV 63
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK-GSAITGPIGKEC-ADLWPRIASAANAIV 140
R +K RR DG + F+ NA V++N E G+ I GP+ +E ++ + +I S A ++
Sbjct: 64 RTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL 123
>UNIPROTKB|Q9KNZ4 [details] [associations]
symbol:rplN "50S ribosomal protein L14" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV PIR:D82058
RefSeq:NP_232214.1 ProteinModelPortal:Q9KNZ4 SMR:Q9KNZ4
PRIDE:Q9KNZ4 DNASU:2615603 GeneID:2615603 KEGG:vch:VC2586
PATRIC:20084198 Uniprot:Q9KNZ4
Length = 123
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/120 (36%), Positives = 68/120 (56%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIV 82
++ ADN+GA+++ I V G G R A VGD++ TVK+ P + K V+ AV+V
Sbjct: 8 LDAADNSGARSVMCIKVLG--GSHRRY--AHVGDIIKVTVKEAIPRGKVKKGDVLKAVVV 63
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK-GSAITGPIGKECADL-WPRIASAANAIV 140
R RK RR DG + F+ NA V++N E G+ I GP+ +E + + +I S A ++
Sbjct: 64 RTRKGVRRPDGSVIRFDRNACVLLNNNSEQPIGTRIFGPVTRELRNAKFMKIVSLAPEVL 123
>TIGR_CMR|VC_2586 [details] [associations]
symbol:VC_2586 "ribosomal protein L14" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049 eggNOG:COG0093
KO:K02874 ProtClustDB:PRK05483 PANTHER:PTHR11761:SF3 HSSP:P04450
OMA:KQFMKIV PIR:D82058 RefSeq:NP_232214.1 ProteinModelPortal:Q9KNZ4
SMR:Q9KNZ4 PRIDE:Q9KNZ4 DNASU:2615603 GeneID:2615603
KEGG:vch:VC2586 PATRIC:20084198 Uniprot:Q9KNZ4
Length = 123
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/120 (36%), Positives = 68/120 (56%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIV 82
++ ADN+GA+++ I V G G R A VGD++ TVK+ P + K V+ AV+V
Sbjct: 8 LDAADNSGARSVMCIKVLG--GSHRRY--AHVGDIIKVTVKEAIPRGKVKKGDVLKAVVV 63
Query: 83 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMK-GSAITGPIGKECADL-WPRIASAANAIV 140
R RK RR DG + F+ NA V++N E G+ I GP+ +E + + +I S A ++
Sbjct: 64 RTRKGVRRPDGSVIRFDRNACVLLNNNSEQPIGTRIFGPVTRELRNAKFMKIVSLAPEVL 123
>UNIPROTKB|J3QQT9 [details] [associations]
symbol:RPL23 "60S ribosomal protein L23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000218 InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.150.20 PANTHER:PTHR11761
SUPFAM:SSF50193 ChiTaRS:RpL23 HGNC:HGNC:10316 EMBL:AC110749
Ensembl:ENST00000470646 Uniprot:J3QQT9
Length = 34
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 28/34 (82%), Positives = 32/34 (94%)
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDG 93
MVMATVKKGKP+LRKKV PAV++RQRK +RRKDG
Sbjct: 1 MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDG 34
>TIGR_CMR|SO_0241 [details] [associations]
symbol:SO_0241 "ribosomal protein L14" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:2.40.150.20
HAMAP:MF_01367_B InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV RefSeq:NP_715881.1
ProteinModelPortal:Q8EK59 SMR:Q8EK59 GeneID:1168124
KEGG:son:SO_0241 PATRIC:23520175 Uniprot:Q8EK59
Length = 122
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/125 (32%), Positives = 69/125 (55%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---V 76
+ + +T++ A N+GA+ + I V G G R A +GD++ +VK+ P + K V
Sbjct: 2 IQMQSTLDVACNSGARRVQCIKVLG--GSHRRY--AGIGDIIKVSVKEAIPRAKAKKGDV 57
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECA-DLWPRIASA 135
AV+VR +K RR DG + F+ NA V++N + G+ I GP+ +E + + +I S
Sbjct: 58 YNAVVVRTKKGVRRPDGSVIRFDRNAAVLLNNNLQPIGTRIFGPVTRELRNEQFMKIVSL 117
Query: 136 ANAIV 140
A ++
Sbjct: 118 APEVL 122
>ASPGD|ASPL0000004926 [details] [associations]
symbol:AN6146 species:162425 "Emericella nidulans"
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000218
InterPro:IPR005745 InterPro:IPR023571 Pfam:PF00238 GO:GO:0006412
EMBL:BN001301 GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702 OMA:KQFMKIV
EnsemblFungi:CADANIAT00006864 Uniprot:C8V2A9
Length = 131
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK---PD------LRKKV 76
+NC DN+GA + ++V L + +A VGD ++ V+K + P+ + KV
Sbjct: 8 LNCIDNSGAAVVECVNV------LKKKRAATVGDRIVIVVQKQRNFGPEGTSSTGIANKV 61
Query: 77 MP-----AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WP 130
AV+VR +K +R DG + F+DNA V+VN G+ G+ + G + E W
Sbjct: 62 RRGDIRHAVVVRVKKEMQRPDGTLVKFDDNACVLVNKSGDPIGTRMNGVVATELRGRQWS 121
Query: 131 RIASAA 136
+I S A
Sbjct: 122 KILSLA 127
>TIGR_CMR|NSE_0276 [details] [associations]
symbol:NSE_0276 "ribosomal protein L14" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000218 InterPro:IPR005745 InterPro:IPR023571
Pfam:PF00238 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:2.40.150.20 HAMAP:MF_01367_B PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 KO:K02874 ProtClustDB:PRK05483
PANTHER:PTHR11761:SF3 OMA:KQFMKIV RefSeq:YP_506167.1
ProteinModelPortal:Q2GEC9 STRING:Q2GEC9 GeneID:3931476
KEGG:nse:NSE_0276 PATRIC:22680645
BioCyc:NSEN222891:GHFU-303-MONOMER Uniprot:Q2GEC9
Length = 119
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK----GKPDLRKKVMPAVI 81
++ ADN+GA+ + I + G K +A +GD++ +VKK GK + AV+
Sbjct: 8 LDVADNSGARKVLCIGISGSK------KTASIGDVITVSVKKCIPVGKVSAGS-IHRAVV 60
Query: 82 VRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VR +K R + F DNA V++N + EM G+ + GP
Sbjct: 61 VRVKK---RSSSSIVVFGDNAVVLLNKQNEMIGTRVFGP 96
>TAIR|locus:2161368 [details] [associations]
symbol:AT5G46160 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0000394
"RNA splicing, via endonucleolytic cleavage and ligation"
evidence=RCA] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] [GO:0009086 "methionine biosynthetic process"
evidence=RCA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP002688 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20 HAMAP:MF_01367_B
InterPro:IPR019972 PANTHER:PTHR11761 SUPFAM:SSF50193
TIGRFAMs:TIGR01067 PROSITE:PS00049 HOGENOM:HOG000183702 KO:K02874
PANTHER:PTHR11761:SF3 HSSP:P04450 OMA:KQFMKIV
ProtClustDB:CLSN2681916 EMBL:AY058844 EMBL:AF402993 IPI:IPI00545806
RefSeq:NP_851140.1 UniGene:At.26651 ProteinModelPortal:Q93Z17
SMR:Q93Z17 STRING:Q93Z17 PRIDE:Q93Z17 EnsemblPlants:AT5G46160.1
GeneID:834658 KEGG:ath:AT5G46160 TAIR:At5g46160 InParanoid:Q93Z17
PhylomeDB:Q93Z17 Genevestigator:Q93Z17 Uniprot:Q93Z17
Length = 173
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---V 76
+ + + DN+GAK ++ ++ +KG+ A +GD ++A+VK+ P+ + K V
Sbjct: 48 IQMGTVLKVVDNSGAKK--VMCIQALKGK----KGARLGDTIVASVKEAMPNGKVKKGAV 101
Query: 77 MPAVIVRQRKPWRRKDGVFMYFEDNAGVIV-----NPKGEMK--GSAITGPIGKE 124
+ V+VR R DG + F+DNA V+V N K + + G+ + GP+ E
Sbjct: 102 VYGVVVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHE 156
>DICTYBASE|DDB_G0294066 [details] [associations]
symbol:mrpl14 "ribosomal protein L14, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;IC] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IC] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 dictyBase:DDB_G0294066
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 EMBL:AB000109
GenomeReviews:AB000109_GR EMBL:D63523 Gene3D:2.40.150.20
PANTHER:PTHR11761 SUPFAM:SSF50193 TIGRFAMs:TIGR01067
PROSITE:PS00049 eggNOG:COG0093 PANTHER:PTHR11761:SF3 PIR:T43775
RefSeq:NP_050096.1 ProteinModelPortal:O21033 STRING:O21033
GeneID:2193922 KEGG:ddi:DidioMp29 OMA:LKVECIN Uniprot:O21033
Length = 129
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 30 DNTGAKNLYIISVKGIKGRLNRLPSAC--VGDMVMATVKK------GKPDLRKK---VMP 78
DN+GA+ + I ++G+ P++ VGD ++ +KK GK L+ K V
Sbjct: 12 DNSGARKVQCIQT--LEGKK---PTSLLRVGDKIVVVIKKMEKRKGGKYKLKVKKSDVCY 66
Query: 79 AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 124
AVIV+ ++P RRK G+ + +N +++ E G+ +TG + KE
Sbjct: 67 AVIVKSKQPVRRKSGIIVNAGENGVILLTKTKEPIGTRLTGVVFKE 112
>POMBASE|SPBC887.07 [details] [associations]
symbol:mrpl38 "mitochondrial ribosomal protein subunit
L38 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 PomBase:SPBC887.07 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
Gene3D:2.40.150.20 InterPro:IPR019972 PANTHER:PTHR11761
SUPFAM:SSF50193 TIGRFAMs:TIGR01067 PROSITE:PS00049
HOGENOM:HOG000183702 eggNOG:COG0093 HSSP:P04450 PIR:T40732
RefSeq:NP_596481.2 STRING:O94292 GeneID:2541232 OrthoDB:EOG4350GM
NextBio:20802344 Uniprot:O94292
Length = 136
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 55 ACVGDMVMATVKKGKPDL---------RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVI 105
A +GD V+ VKK + R + A+IVR + P RR DG ++ F+DNA V+
Sbjct: 41 ASLGDEVVVVVKKARSGSSVTAANKVKRGDIHHAIIVRTKSPVRRPDGRYVRFDDNACVL 100
Query: 106 VNPKGEMKGSAITGPIGKE 124
VN + E G+ I + E
Sbjct: 101 VNKECEPLGTRILSVVANE 119
>TAIR|locus:2007913 [details] [associations]
symbol:HLL "HUELLENLOS" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=RCA] InterPro:IPR000218 InterPro:IPR005745
InterPro:IPR023571 Pfam:PF00238 EMBL:CP002684 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:2.40.150.20 InterPro:IPR019972
PANTHER:PTHR11761 SUPFAM:SSF50193 PROSITE:PS00049 eggNOG:COG0093
KO:K02874 PANTHER:PTHR11761:SF3 HSSP:P04450 EMBL:BT004292
EMBL:BT005522 IPI:IPI00545916 RefSeq:NP_173200.1 UniGene:At.41826
ProteinModelPortal:Q84JG5 SMR:Q84JG5 STRING:Q84JG5 PaxDb:Q84JG5
PRIDE:Q84JG5 EnsemblPlants:AT1G17560.1 GeneID:838332
KEGG:ath:AT1G17560 OMA:SSSNGMM ProtClustDB:CLSN2681916
ArrayExpress:Q84JG5 Genevestigator:Q84JG5 Uniprot:Q84JG5
Length = 196
Score = 102 (41.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 20 LPVAATVNCADNTGAKNLYII-SVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKV-- 76
+ + + C DN+ AK + I S++G KG A +GD+++ +VK+ P ++KKV
Sbjct: 49 IQMGTILKCVDNSCAKEVMCIQSLRGKKG-------ARLGDIIVGSVKEANPIVQKKVKK 101
Query: 77 --MP-----------AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKG 114
+P V+VR P R DG + F+DNA V+V K E KG
Sbjct: 102 DAIPKGKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIK-EKKG 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 140 0.00091 102 3 11 22 0.43 31
30 0.46 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 569 (61 KB)
Total size of DFA: 125 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.48u 0.14s 12.62t Elapsed: 00:00:00
Total cpu time: 12.48u 0.14s 12.62t Elapsed: 00:00:00
Start: Sat May 11 06:26:36 2013 End: Sat May 11 06:26:36 2013