BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032476
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49690|RL23_ARATH 60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2
SV=3
Length = 140
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/140 (97%), Positives = 140/140 (100%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>sp|Q07760|RL23_TOBAC 60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1
Length = 140
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/140 (97%), Positives = 139/140 (99%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKVMPAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>sp|Q9XEK8|RL23_TORRU 60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1
Length = 139
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/140 (91%), Positives = 133/140 (95%), Gaps = 1/140 (0%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS G++GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 59
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM SAITGP
Sbjct: 60 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 119
Query: 121 IGKECADLWPRIASAANAIV 140
IGKECADLWPRIASAANAIV
Sbjct: 120 IGKECADLWPRIASAANAIV 139
>sp|Q6PC14|RL23_DANRE 60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1
Length = 140
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/139 (85%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62832|RL23_RAT 60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62831|RL23_PIG 60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62830|RL23_MOUSE 60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=1 SV=1
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q90YU5|RL23_ICTPU 60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|P62829|RL23_HUMAN 60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q3T057|RL23_BOVIN 60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2
Length = 140
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q5REU2|RL23_PONAB 60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1
Length = 140
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/139 (84%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKG+LNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q9GNE2|RL23_AEDAE 60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1
Length = 140
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 129/139 (92%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139
>sp|Q9XSU3|RL23_CANFA 60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1
Length = 140
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/139 (84%), Positives = 127/139 (91%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
VMATVKKGKP LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWP IAS A +I
Sbjct: 121 VXKECADLWPXIASNAGSI 139
>sp|P48159|RL23_DROME 60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=2
SV=2
Length = 140
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/139 (81%), Positives = 130/139 (93%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG+AG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A++I
Sbjct: 121 VAKECADLWPRIASNASSI 139
>sp|O42867|RL23_SCHPO 60S ribosomal protein L23 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl23a PE=3 SV=1
Length = 139
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 106/137 (77%), Positives = 122/137 (89%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+A
Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLA 62
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGK 123
TVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ K
Sbjct: 63 TVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAK 122
Query: 124 ECADLWPRIASAANAIV 140
ECADLWPRIAS A +V
Sbjct: 123 ECADLWPRIASNAGTVV 139
>sp|P48158|RL23_CAEEL 60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=3
SV=1
Length = 140
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/139 (76%), Positives = 124/139 (89%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++ISV GI+GRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+ +VKKGKP+LRKKV+ V++RQRK +RRKDG F+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIA+ A +I
Sbjct: 121 VAKECADLWPRIAANAGSI 139
>sp|Q93140|RL23_BRUMA 60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1
Length = 140
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/139 (77%), Positives = 124/139 (89%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++I+V GIKGRLNRLPSA VGDM
Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDM 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
+A+VKKGKP+LRKKV+ AV+VRQRK +RR DG +YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 FVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGP 120
Query: 121 IGKECADLWPRIASAANAI 139
+ KECADLWPRIAS A +I
Sbjct: 121 VTKECADLWPRIASNAGSI 139
>sp|P0CX42|RL23B_YEAST 60S ribosomal protein L23-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23B PE=1 SV=1
Length = 137
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/133 (76%), Positives = 119/133 (89%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 127
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 LWPRIASAANAIV 140
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>sp|P0CX41|RL23A_YEAST 60S ribosomal protein L23-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL23A PE=1 SV=1
Length = 137
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/133 (76%), Positives = 119/133 (89%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKK
Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKK 64
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 127
GKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECAD
Sbjct: 65 GKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECAD 124
Query: 128 LWPRIASAANAIV 140
LWPR+AS + +V
Sbjct: 125 LWPRVASNSGVVV 137
>sp|Q54G86|RL23_DICDI 60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3
SV=1
Length = 136
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 115/132 (87%), Gaps = 1/132 (0%)
Query: 9 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68
+ G+ +R+SLGLPV A +N ADN+GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATVKKG
Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKG 65
Query: 69 KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128
KP+LRKKV ++VRQRK W+RKDGV++YFEDNAGV+ NPKGE+KG+ I GP+ KEC+DL
Sbjct: 66 KPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDL 124
Query: 129 WPRIASAANAIV 140
WP++A+ A IV
Sbjct: 125 WPKVATNAGTIV 136
>sp|P0DJ53|RL23_TETTS 60S ribosomal protein L23 OS=Tetrahymena thermophila (strain SB210)
GN=RPL23 PE=1 SV=1
Length = 141
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 117/137 (85%)
Query: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
RGRGG G K ++SLGLPV A +NCADN+GAKNLY I+ GIKG L++LPSA +GDM++
Sbjct: 5 RGRGGQVGTKAKVSLGLPVGAVMNCADNSGAKNLYTIACFGIKGHLSKLPSASIGDMILC 64
Query: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGK 123
+VKKG P LRKKV+ A+++RQR+PWRR+DGVF+YFEDNAGVI NPKGEMKGS ITGP+ K
Sbjct: 65 SVKKGSPKLRKKVLQAIVIRQRRPWRRRDGVFIYFEDNAGVIANPKGEMKGSQITGPVAK 124
Query: 124 ECADLWPRIASAANAIV 140
ECAD+WP++AS A ++V
Sbjct: 125 ECADIWPKVASNAGSVV 141
>sp|Q94776|RL23_TRYCR 60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1
Length = 141
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 106/132 (80%), Gaps = 2/132 (1%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G +FR+SL LPV A VNCADNTGAKNLYIISVKG GRLNRLP+A +GD+VMA+VKKGKP
Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKP 69
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG-EMKGSAITGPIGKECAD-L 128
+LR+KV+ AVI+RQRK WRRKDG +YFEDNAGVIVN +G + + S I GP+ KE
Sbjct: 70 ELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPS 129
Query: 129 WPRIASAANAIV 140
P+I+S A AIV
Sbjct: 130 GPKISSHAPAIV 141
>sp|Q9HIR9|RL14_THEAC 50S ribosomal protein L14P OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 95/126 (75%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
R + GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM MA+VKKG P++R
Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRS 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIAS 134
KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+
Sbjct: 67 KVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAA 126
Query: 135 AANAIV 140
A+ IV
Sbjct: 127 IASIIV 132
>sp|Q8SRA7|RL23_ENCCU 60S ribosomal protein L23 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL23 PE=3 SV=1
Length = 146
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 97/127 (76%)
Query: 13 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL 72
+++M+ G+ V + CADN+GAK L I VK +GRLNRLP+A GD+ + +VKKGKP+L
Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPEL 78
Query: 73 RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRI 132
RKKV A+++RQ+K WRR DG + FEDNA V++N KGE++G+ I GP+ +E AD+WP+I
Sbjct: 79 RKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPKI 138
Query: 133 ASAANAI 139
+S A++I
Sbjct: 139 SSQASSI 145
>sp|A3DNB7|RL14_STAMF 50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1
Length = 140
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 102/140 (72%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
M K+G+G A ++ R++ GL V + V ADN+GAK + II V G KGRL R+P A +GD+
Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDL 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
V+ TVKKG P++RK+V+ AVIVRQ++P+RR DG ++ FEDNA IV P+G KGS I GP
Sbjct: 61 VVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
I KE A+ WP++A+ A +V
Sbjct: 121 IAKEVAERWPQLANIATIVV 140
>sp|Q97BW6|RL14_THEVO 50S ribosomal protein L14P OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 8 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKK 67
G AG + R GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM +A+VKK
Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKK 59
Query: 68 GKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 127
G P++R KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+
Sbjct: 60 GTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAE 119
Query: 128 LWPRIASAANAIV 140
WPRIA+ A+ IV
Sbjct: 120 RWPRIAAIASIIV 132
>sp|Q9YF82|RL14_AERPE 50S ribosomal protein L14P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl14p
PE=3 SV=1
Length = 140
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 101/140 (72%)
Query: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
M+K+ + G +++ ++ GL V + V ADN+GAK + IISV +K RL RLPSA VGD+
Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDL 60
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
V+ +VKKG P +R++V+ AV+VRQR+P+RR DG ++ FEDNA VIVNP G +GS + GP
Sbjct: 61 VVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGP 120
Query: 121 IGKECADLWPRIASAANAIV 140
I +E A+ WPR+A A IV
Sbjct: 121 IAREAAERWPRVAKIATMIV 140
>sp|Q8TW20|RL14_METKA 50S ribosomal protein L14P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl14p PE=3 SV=1
Length = 133
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 90/122 (73%)
Query: 19 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMP 78
LPV A + CADNTGA+ L II+VKG KG RLP+A +GDMV+ +VK+G PD+RK+V+
Sbjct: 12 ALPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVN 71
Query: 79 AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
AVIVRQRK +RR DG + FEDNA VIV P G +GS I GP+ KE A+ WPRI S A+
Sbjct: 72 AVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERWPRIGSIASI 131
Query: 139 IV 140
IV
Sbjct: 132 IV 133
>sp|Q2NFW7|RL14_METST 50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl14p PE=3 SV=1
Length = 132
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 90/125 (72%)
Query: 16 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 75
+S LP+ A + C DNTGA+ + IISVKG KG RL SA VGDMV+ +VKKG D+R++
Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRRE 67
Query: 76 VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 135
V AV+VRQ+K +RR DG+ + FEDNA VI+ G +KGS I GPI KE ADLWP I SA
Sbjct: 68 VTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLWPAIGSA 127
Query: 136 ANAIV 140
A+ IV
Sbjct: 128 ASIIV 132
>sp|A2BMC9|RL14_HYPBU 50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl14p PE=3 SV=1
Length = 138
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 96/131 (73%)
Query: 10 AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGK 69
AG + ++ GL V + V ADN+GAK II V G KGRL R+P A VGDMV+ TVKKG
Sbjct: 8 AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGT 67
Query: 70 PDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 129
P++RK+V+ A+++RQR+P+RR DG ++ FEDNA VIV+P G KGS I GP+ +E A+ W
Sbjct: 68 PEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERW 127
Query: 130 PRIASAANAIV 140
P++A+ A+ I+
Sbjct: 128 PKVANIASIII 138
>sp|Q6L1B7|RL14_PICTO 50S ribosomal protein L14P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl14p
PE=3 SV=1
Length = 132
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
R + GLP+ A + C DNTGAK + +I VK + R+P+A VGDM +A+VKKG P++R
Sbjct: 7 RETRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRS 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIAS 134
KV+ AV+VRQR+P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+
Sbjct: 67 KVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAA 126
Query: 135 AANAIV 140
++ IV
Sbjct: 127 ISSTIV 132
>sp|O26121|RL14_METTH 50S ribosomal protein L14P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl14p PE=3 SV=1
Length = 132
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 94/126 (74%)
Query: 15 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRK 74
+++ LPV A + C DNTGA+ + IISV+G KG RL +A VGDMV+ +VKKG D+R+
Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRR 66
Query: 75 KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIAS 134
+V+ AVIVRQ+K +RR DG+ + FEDNA VIV+P+G +KGS I GP+ KE AD WP + S
Sbjct: 67 EVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGS 126
Query: 135 AANAIV 140
AA+ IV
Sbjct: 127 AASIIV 132
>sp|A5UL78|RL14_METS3 50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1
Length = 132
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 92/125 (73%)
Query: 16 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 75
+S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++
Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRRE 67
Query: 76 VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 135
V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD WP + SA
Sbjct: 68 VVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGSA 127
Query: 136 ANAIV 140
A+ +V
Sbjct: 128 ASILV 132
>sp|Q8U009|RL14_PYRFU 50S ribosomal protein L14P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl14p PE=1 SV=1
Length = 141
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G + R + LPV A + ADN+GAK + II V G RL SA VGD
Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 119
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PIGKECADLWPRIASAANAIV 140
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAERWVRIGSIASIIV 141
>sp|A0RVY3|RL14_CENSY 50S ribosomal protein L14P OS=Cenarchaeum symbiosum (strain A)
GN=rpl14p PE=3 SV=1
Length = 144
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 4 RGRGGSAG-NKFR--MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
R RG + G +FR ++ LPV A V CADN+GAK L II V+ K R++RLP+A VGD
Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDY 64
Query: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
V VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V+ P+GEMKG+ I GP
Sbjct: 65 VNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGP 124
Query: 121 IGKECADLWPRIASAANAIV 140
+ E ++ WPR+A+ A+ +V
Sbjct: 125 VAAEASEKWPRLANLASMVV 144
>sp|P54037|RL14_METJA 50S ribosomal protein L14P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 85/122 (69%)
Query: 19 GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMP 78
LPV A CADNTGAK + II+V+ KG RLP+A VGDMV+ TVKKG P++RK+V+P
Sbjct: 11 ALPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLP 70
Query: 79 AVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
AV++RQRK RR DG + F DNA VIV P G KGS I GP+ KE A+ WP IA A
Sbjct: 71 AVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWPGIARIAKI 130
Query: 139 IV 140
I+
Sbjct: 131 II 132
>sp|Q9V1U6|RL14_PYRAB 50S ribosomal protein L14P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl14p PE=3 SV=1
Length = 141
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G R + +PV A + ADN+GAK + +I V G RL SA VGD
Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 119
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PIGKECADLWPRIASAANAIV 140
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAERWVRIGSIASIIV 141
>sp|O59427|RL14_PYRHO 50S ribosomal protein L14P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl14p PE=3 SV=2
Length = 141
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Query: 1 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGD 59
M+K+G G + G + R + +P+ A + ADN+GAK + +I V G RL SA VGD
Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGD 60
Query: 60 MVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITG 119
MV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I G
Sbjct: 61 MVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRG 120
Query: 120 PIGKECADLWPRIASAANAIV 140
P+ +E A+ W RI S A+ IV
Sbjct: 121 PVAREAAEKWVRIGSIASIIV 141
>sp|A6UQ54|RL14_METVS 50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1
Length = 132
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
>sp|P14031|RL14_METVA 50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p
PE=3 SV=1
Length = 132
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 85/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLPSA VG +V +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
>sp|Q975J0|RL14_SULTO 50S ribosomal protein L14P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl14p PE=3 SV=2
Length = 138
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 89/130 (68%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G++ ++ GL TV ADN+GAK II + G KG L R+P A + D+VM +V+KG P
Sbjct: 9 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTP 68
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWP 130
++RK+ AVIVRQR P+RR DG ++ FEDNA VIVNP G KG+ I GPI KE A+ WP
Sbjct: 69 EVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWP 128
Query: 131 RIASAANAIV 140
++AS A ++
Sbjct: 129 KVASIATMVI 138
>sp|A6VGZ5|RL14_METM7 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rpl14p PE=3 SV=1
Length = 132
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L II+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|Q6LXE3|RL14_METMP 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rpl14p PE=3 SV=1
Length = 132
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|B1L776|RL14_KORCO 50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl14p PE=3 SV=1
Length = 141
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 88/130 (67%)
Query: 11 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP 70
G K +++ GLPV A + CADNTGAK L II V G KGR +R+P+A VGDMV VK+GK
Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKY 71
Query: 71 DLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWP 130
DL K A++VRQR P+RRK+G ++ FEDNA V+VN G +GS GPI KE + WP
Sbjct: 72 DLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWP 131
Query: 131 RIASAANAIV 140
++ + +V
Sbjct: 132 SLSVISAQVV 141
>sp|A9A9Q4|RL14_METM6 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rpl14p PE=3 SV=1
Length = 132
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 84/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|A4YCX6|RL14_METS5 50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl14p PE=3 SV=1
Length = 138
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 84/115 (73%)
Query: 26 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQR 85
VN +DN+GAK IISV G +G L R+P A VGD+VM +V+KG PD+RK+ AV++RQR
Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQR 83
Query: 86 KPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
P+RR DG ++ F+DNA VIVNP G KG+ I GP+ +E A+ WP++AS A IV
Sbjct: 84 MPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138
>sp|A6UWU8|RL14_META3 50S ribosomal protein L14P OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1
Length = 132
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 84/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L II+VKG KG RLP+ VG +V +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ W ++ A I
Sbjct: 72 IIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131
>sp|A4FWB1|RL14_METM5 50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rpl14p PE=3 SV=1
Length = 132
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 84/120 (70%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA
Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I
Sbjct: 72 IIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
>sp|O28364|RL14_ARCFU 50S ribosomal protein L14P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl14p PE=3 SV=1
Length = 132
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%)
Query: 20 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPA 79
LP A + CADNTGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V A
Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYA 71
Query: 80 VIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 139
VIVRQRK +RR DG + FEDNA VI N +GE +GS I G + +E A+ + +I + A+ I
Sbjct: 72 VIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVI 131
Query: 140 V 140
V
Sbjct: 132 V 132
>sp|A8ACD2|RL14_IGNH4 50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1
Length = 137
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Query: 9 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVK 66
++ NK R + GL V + V DN+GAK II V G GRL R+P A VGDMV+ TVK
Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVK 63
Query: 67 KGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECA 126
KG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G +GS I GP+ +E
Sbjct: 64 KGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAV 123
Query: 127 DLWPRIASAANAIV 140
+ WPRI + A+ +V
Sbjct: 124 ERWPRIGNVASIVV 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,512,841
Number of Sequences: 539616
Number of extensions: 2013555
Number of successful extensions: 6055
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3928
Number of HSP's gapped (non-prelim): 1038
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)