BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032477
(140 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 91/110 (82%), Gaps = 1/110 (0%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQL-ESSTYAILSKEMADRTRELRQMKGEELQELNM 59
MK+V++RHNL S+NL K DQPSL+LQL E+S +A +SKE+AD++ LRQM+GEELQ L++
Sbjct: 62 MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDI 121
Query: 60 EELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHG 109
EEL +LEK+LE GL+RV++TK +++++EI L++K QL +EN RL+Q G
Sbjct: 122 EELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQG 171
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQL-ESSTYAILSKEMADRTRELRQMKGEELQELNM 59
MKQ+++R +LHS+NL K DQPSL+LQL E+S Y+ LSKE+++++ LRQM+GEELQ LN+
Sbjct: 62 MKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNI 121
Query: 60 EELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQH 108
EEL +LE+SLE GLSRV++ KG++++ EI+ L++K L EEN +L+Q
Sbjct: 122 EELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQ 170
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLE-SSTYAILSKEMADRTRELRQMKGEELQELNM 59
M+Q+IDR+N HS+ L + + L LQ E SST A L +E+A+ + LRQM+GEEL LN+
Sbjct: 81 MEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNV 140
Query: 60 EELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQH 108
E+L LEKSLE GL V++TK +++L+EID L RK QL EENLRLK+
Sbjct: 141 EQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQ 189
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 81/106 (76%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
M ++ID++N HS NL K +QPSL L LE S YA L++++A+ + LRQM+GEEL+ L+++
Sbjct: 62 MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSID 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
EL +LEK+LE GL RV+ TK ++ + +I L+RK +QL EEN++L+
Sbjct: 122 ELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLR 167
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Query: 1 MKQVIDRHNLHSQNLHKF-DQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNM 59
M+ ++ R++LH+ N++K D PS L+LE+ + LSKE+ D+T++LR+++GE+L LN+
Sbjct: 62 MRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLNL 121
Query: 60 EELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQ 107
EEL RLEK LE GLSRV + KGE ++++I +L ++ ++L +EN RL+
Sbjct: 122 EELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRD 169
>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
GN=MADS55 PE=2 SV=2
Length = 245
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 23/129 (17%)
Query: 1 MKQVIDRHNLHSQNLHKFD-QPSLQL----------------------QLESSTYAILSK 37
M ++ID++ HS+NL K D QPS+ L QLE S + L++
Sbjct: 62 MNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNE 121
Query: 38 EMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQ 97
++A+ + +LRQM+GEEL+ L++EEL ++EK+LE GL RV+ TK ++ + EI L+RK Q
Sbjct: 122 QLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQ 181
Query: 98 LTEENLRLK 106
L EEN+RL+
Sbjct: 182 LAEENMRLR 190
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R M GE+L L+++EL +LEK LE LS+ Q K + ++ ++D LRRKE QL E N
Sbjct: 107 RSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNK 166
Query: 104 RLK 106
+LK
Sbjct: 167 QLK 169
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
MK VI+R++ + P+ ++Q AIL +++ + RQM GEEL L++E
Sbjct: 62 MKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVE 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRL 105
L LE LE L V K + L+ EI L R+ + +ENL L
Sbjct: 122 ALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDL 166
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
MK VIDR+ P+ +L+ A L +++ + RQ+ GE+L LN++
Sbjct: 62 MKSVIDRYGKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVK 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRL 105
EL LE LE L V K L++EI L RK + + +EN+ L
Sbjct: 122 ELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMEL 166
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R + GE+L L+++EL +LEK LE LS+ Q K + ++ +++ LRRKE QL E N
Sbjct: 105 RTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINR 164
Query: 104 RLK 106
+LK
Sbjct: 165 QLK 167
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 35 LSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRK 94
L +++ D R + GE L LN +EL LE LE G+SRV K E L+ EI+ ++++
Sbjct: 112 LRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKR 171
Query: 95 EAQLTEENLRLKQHGLIQMYKATHLTP----SSAVHLEIILKTG 134
E +L N+ L+ ++ + L P SS + + ++G
Sbjct: 172 EMELQHNNMYLR----AKIAEGARLNPDQQESSVIQGTTVYESG 211
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R + GE L LN +EL LE LE G+SRV K E L+ EI+ ++++E +L +N+ L+
Sbjct: 124 RHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLR 183
Query: 107 QHGLIQMYKATHLTPSSAVHLEIILKTG 134
I SS +H + ++G
Sbjct: 184 SK--ITERTGLQQQESSVIHQGTVYESG 209
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R + GE + + +EL LE LE G+SR+ K E L +EI+ ++++EA L EN+ L+
Sbjct: 111 RHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLR 170
Query: 107 ---------QHGLIQMYKATHLTPSSAV 125
+H Q + + P+ AV
Sbjct: 171 AKVAEAERAEHDDQQAAEDDEMAPAPAV 198
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
MK VIDR+N + P+ +++ A+L +E+ RQM GE+L L++
Sbjct: 62 MKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVN 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL-------RLKQHGLIQM 113
EL LE +E L + K + L EI L +K + +ENL R+ Q +++
Sbjct: 122 ELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQEN-VEL 180
Query: 114 YKATHLTPSSAV-HLEIIL 131
YK ++ ++ H E+ +
Sbjct: 181 YKKAYMANTNGFTHREVAV 199
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3
PE=2 SV=2
Length = 258
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
M + +D++ HS +Q + LQ + Y L + R + GEEL E+++
Sbjct: 64 MARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVN 123
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQ 107
EL LE+ ++ L ++ TK +L+++ L+ KE L E N L++
Sbjct: 124 ELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRR 170
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R + GE+L+ ++++EL LE+ LEG LS + K + ++ +++ LRRKE +L + N +LK
Sbjct: 107 RNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLK 166
>sp|P29382|SEP1_ARATH Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1
PE=1 SV=2
Length = 251
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 19 DQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQ 78
++P+ +L+ Y L + R+ R + GE+L LN +EL +LE+ L+G L +V
Sbjct: 82 NKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRS 141
Query: 79 TKGERLLNEIDALRRKEAQLTEEN 102
K + +L+++ L+ KE L E N
Sbjct: 142 IKTQYMLDQLSDLQNKEQMLLETN 165
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
++ I+R+N ++P Q L + R R + GE+L E+ ++
Sbjct: 62 IESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVK 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
EL LE+ LE L+ Q K + ++ E++ LR+KE QL + N +LK
Sbjct: 122 ELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLK 167
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 35 LSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRK 94
L +E++ + R M GE L L + +L LE LE G+SR+ K E L EI+ +++K
Sbjct: 113 LRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKK 172
Query: 95 EAQLTEENLRLK 106
E L N L+
Sbjct: 173 EIDLHNNNQYLR 184
>sp|Q9LLA7|AP32_ASAEU MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2
PE=2 SV=1
Length = 210
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
M+++IDR+ S N P Q + E+ +R GE+L L M
Sbjct: 39 MREIIDRYQKLSGNC----APVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMN 94
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHGLIQMYKATHL- 119
E+++LE+ LE +++V K + L ++D LRRKE L E+N L + +IQ + A +
Sbjct: 95 EMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNREL--YRVIQDHHAASME 152
Query: 120 ----TPSSAVHLEIILK 132
PS H + +
Sbjct: 153 QKMVDPSMLDHFGVFYQ 169
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 46 LRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEEN 102
+R+M GE+L L M EL L + LE SRV K + +L +++ LRRKE L ++N
Sbjct: 105 IRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQN 161
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 45 ELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEE 101
ELR +KGE++Q LN++ LM +E ++E GL +V + E L+++ RR E + EE
Sbjct: 104 ELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISK----RRNEKMMAEE 156
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 22 SLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKG 81
S QL+ + Y L + + R R + GE+L L ++EL LEK L+ L V T+
Sbjct: 87 SEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRT 146
Query: 82 ERLLNEIDALRRKEAQLTEENLRLK 106
+ L++++ L+RKE ++E N L+
Sbjct: 147 KHLVDQLTELQRKEQMVSEANRCLR 171
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 22 SLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKG 81
S QL+ + Y L + + R R + GE+L L ++EL LEK L+ L V T+
Sbjct: 87 SEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRT 146
Query: 82 ERLLNEIDALRRKEAQLTEENLRLK 106
+ L++++ L+RKE ++E N L+
Sbjct: 147 KHLVDQLTELQRKEQMVSEANRCLR 171
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R + G+ L L+++EL ++E LE +SR+ K E LL EI+ +++E +L EN+ L+
Sbjct: 109 RNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLR 168
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R + G+ + +N EL +LE L+ GL ++ K E L EI+ ++R+E +L +N+ LK
Sbjct: 151 RTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLK 210
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R + GE+L LN +EL LE+ L+ L ++ T+ + +L+++ L+RKE L E N
Sbjct: 108 RSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANR 167
Query: 104 RLKQ 107
LKQ
Sbjct: 168 TLKQ 171
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R M GE L + ++EL LE+ +E G+S++ K E L EI+ ++++E L N L+
Sbjct: 125 RNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLR 184
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
M + ++R+ S + QPS + + Y L ++ R R + GE+L EL+ +
Sbjct: 63 MNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTK 122
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
EL +LE L+ L ++ K + +L+++ L++KE L E N LK
Sbjct: 123 ELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALK 168
>sp|P29384|SEP2_ARATH Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2
PE=1 SV=1
Length = 250
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 19 DQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQ 78
++P+ +L+ Y L + R+ R + GE+L LN +EL +LE+ L+G L +V
Sbjct: 82 NKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRC 141
Query: 79 TKGERLLNEIDALRRKEAQLTEEN 102
K + +L+++ L+ KE L + N
Sbjct: 142 IKTQYMLDQLSDLQGKEHILLDAN 165
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R M GE L L++ +L LE+ +E G+S++ K E L EI+ ++++E L N L+
Sbjct: 125 RNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLR 184
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 47 RQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLRLK 106
R GE L LN+ +L LE+ +E G+S++ K E L EI+ ++++E L N L+
Sbjct: 125 RNFLGESLAALNLRDLRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLR 184
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 45 ELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEE--- 101
ELR +KGE++ LN ELM LE +LE GL+ + + NE+ + RK+ Q EE
Sbjct: 102 ELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQ-----NEVLRMMRKKTQSMEEEQD 156
Query: 102 --NLRLKQ 107
N +L+Q
Sbjct: 157 QLNCQLRQ 164
>sp|Q9SAR1|MADS8_ORYSJ MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica
GN=MADS8 PE=1 SV=1
Length = 248
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 25 LQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERL 84
+Q + Y L + + R R + GE+L L ++EL +LEK L+ L + T+ + +
Sbjct: 90 VQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHM 149
Query: 85 LNEIDALRRKEAQLTEENLRLKQ--------HGLIQMYKAT 117
L+++ L+R+E L E N L++ HG + + AT
Sbjct: 150 LDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGAT 190
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 45 ELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENLR 104
ELR +KGE++ LN +ELM LE +LE G S + K +++ E + RK ++ EE +
Sbjct: 104 ELRHLKGEDITTLNYKELMVLEDALENGTSAL---KNKQM--EFVRMMRKHNEMVEEENQ 158
Query: 105 LKQHGLIQMYKATHLTP 121
Q L QM HL P
Sbjct: 159 SLQFKLRQM----HLDP 171
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 1 MKQVIDRHNLHSQN--LHKFDQPSLQLQLESSTYAILSK-EMADRTRELRQMKGEELQEL 57
+++ IDR+ ++++ +K Q +Q Q++ T + K E D +R R++ GE L+
Sbjct: 63 LQKTIDRYKAYTKDHVNNKTIQQDIQ-QVKDDTLGLAKKLEALDESR--RKILGENLEGF 119
Query: 58 NMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQL--TEENLRLKQHGL-IQMY 114
++EEL LE LE L ++ K E L +I L+ KE L ENLR K L
Sbjct: 120 SIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAAL 179
Query: 115 KATHLTPSSA 124
A H+T ++A
Sbjct: 180 VANHMTTTTA 189
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 1 MKQVIDRHNLHSQNL----HKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQE 56
M Q+IDR+ LH+ L H DQ L ++E +L +E + LR G +L
Sbjct: 64 MPQLIDRY-LHTNGLRLPDHHDDQEQLHHEME-----LLRRETCNLELRLRPFHGHDLAS 117
Query: 57 LNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEEN 102
+ EL LE+ LE + +V + K E + +++ L RK L E+N
Sbjct: 118 IPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDN 163
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 14 NLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGL 73
N HK + S Q + E+S L+K++ R++ GE + ++EEL +LE L+ L
Sbjct: 78 NNHKRNDNSQQARDETSG---LTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSL 134
Query: 74 SRVVQTKGERLLNEIDALRRKEAQLTEENLRLKQHGL 110
SR+ K + L EI+ L+ +E L +EN LK+ L
Sbjct: 135 SRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWL 171
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 32 YAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDAL 91
Y IL ++ + RQ+ GE+L L ++EL +LE LE L + K + L I L
Sbjct: 95 YGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISEL 154
Query: 92 RRKEAQLTEEN 102
++KE L +N
Sbjct: 155 QKKEKSLKNQN 165
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 32 YAILSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDAL 91
Y IL ++ + RQ+ GE+L L ++EL +LE LE L + K + L I L
Sbjct: 95 YGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISEL 154
Query: 92 RRKEAQLTEEN 102
++KE L +N
Sbjct: 155 QKKEKSLKNQN 165
>sp|Q42464|AGL9_SOLLC Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum
GN=TDR5 PE=2 SV=1
Length = 224
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R + GE+L LN +EL LE+ L+ L ++ T+ + +L+++ +RKE L E N
Sbjct: 108 RSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANR 167
Query: 104 RLKQ 107
LKQ
Sbjct: 168 TLKQ 171
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R + GE+L L +EL +LE+ L+ L ++ T+ + +L+++ L+R+E L E N
Sbjct: 106 RSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANK 165
Query: 104 RLK 106
LK
Sbjct: 166 TLK 168
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 35 LSKEMADRTRELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRK 94
+ KE + +LR +KGE++ LN +ELM LE+ L GLS + + E L + RK
Sbjct: 94 IKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEIL-----RMVRK 148
Query: 95 EAQLTEENLRLKQHGLIQ 112
Q+ EE + Q+ L Q
Sbjct: 149 NDQILEEEHKQLQYALHQ 166
>sp|O65874|MTF1_PEA MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1
Length = 247
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 44 RELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEENL 103
R R + GE+L L+ ++L LE+ L+ L ++ T+ + +L+++ L+RKE L E N
Sbjct: 110 RSQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANR 169
Query: 104 RLKQ 107
L+Q
Sbjct: 170 ALRQ 173
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESST---YAILSKEMADRTRELRQMKGEELQEL 57
M++V++R+ +S + P + +++ Y+ L ++ R R GEEL+ +
Sbjct: 63 MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPM 122
Query: 58 NMEELMRLEKSLEGGLSRVVQTKGERLLNE-IDALRRKEAQLTEEN 102
++++L LE+ LE L + +++ +L+NE ++ L+RKE ++ EEN
Sbjct: 123 SLKDLQNLEQQLETALKHI-RSRKNQLMNESLNHLQRKEKEIQEEN 167
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
MK +I+R+N ++ H+ S + +L A L +++ + RQ+ G++L L++E
Sbjct: 62 MKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVE 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRK 94
+L LE LE L + K ++++I L RK
Sbjct: 122 DLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 1 MKQVIDRHNLHSQN--LHKFDQPSLQLQLESSTYAILSK-EMADRTRELRQMKGEELQEL 57
+++ IDR+ ++++ +K Q +Q Q++ T + K E D +R R++ GE L+
Sbjct: 63 LQKTIDRYKAYTKDHVNNKTIQQDIQ-QVKDDTLGLAKKLEALDESR--RKILGENLEGC 119
Query: 58 NMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQL--TEENLRLKQHGL-IQMY 114
++EEL LE LE L + K E L +I L+ KE L ENLR K L
Sbjct: 120 SIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAAAL 179
Query: 115 KATHLTPSSA 124
A H+T ++A
Sbjct: 180 VANHMTTTTA 189
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLESSTYAILSKEMADRTRELRQMKGEELQELNME 60
+K I+R N + P+ +++ L +E+ RQ+ G EL L+++
Sbjct: 62 VKSTIERFNTAKMEEQELMNPASEVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVK 121
Query: 61 ELMRLEKSLEGGLSRVVQTKGERLL-NEIDALRRKEAQLTEENL-------RLKQHGLIQ 112
EL +E LE L R ++ K E++L NEI L RK + ENL R+ Q ++
Sbjct: 122 ELQNIESQLEMSL-RGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQEN-VE 179
Query: 113 MYKATHLTPSS 123
+YK + T ++
Sbjct: 180 LYKKAYGTSNT 190
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 1 MKQVIDRHNLHSQNLHKFDQPSLQLQLE---SSTYAILSKEMADRTRELRQMKGEELQEL 57
M++V++R+ +S + P + + S Y+ L ++ R R GE+L+ +
Sbjct: 63 MEKVLERYERYSYAERQLIAPDSHINAQPNWSMEYSRLKAKIELLERNQRHYLGEDLEPM 122
Query: 58 NMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEEN 102
++++L LE+ LE L + K + + ++ L+RKE ++ EEN
Sbjct: 123 SLKDLQNLEQQLETALKHIRSRKNQLMYESLNHLQRKENEIQEEN 167
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 45 ELRQMKGEELQELNMEELMRLEKSLEGGLSRVVQTKGERLLNEIDALRRKEAQLTEE--- 101
ELR +KGE++ LN ELM LE +L+ GL+ + + N++ + RK+ Q EE
Sbjct: 102 ELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQ-----NDLLRMMRKKTQSMEEEQD 156
Query: 102 --NLRLKQ 107
N +L+Q
Sbjct: 157 QLNWQLRQ 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,856,204
Number of Sequences: 539616
Number of extensions: 1571824
Number of successful extensions: 8567
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 8296
Number of HSP's gapped (non-prelim): 479
length of query: 140
length of database: 191,569,459
effective HSP length: 105
effective length of query: 35
effective length of database: 134,909,779
effective search space: 4721842265
effective search space used: 4721842265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)