Your job contains 1 sequence.
>032480
MAGVGEAQRRQAGRSRPLHPSGRGPPPPPPRPRFEPVDREKTCPLLLRVFTKIGGHHSRE
DFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPDKNGRFMVR
EVSHSSLTVSYLGHDQSAMN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032480
(140 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043704 - symbol:SAP18 "SIN3 associated polype... 390 3.5e-36 1
UNIPROTKB|G3X7E1 - symbol:SAP18 "Histone deacetylase comp... 255 7.0e-22 1
UNIPROTKB|Q90ZH5 - symbol:chSAP18 "Uncharacterized protei... 253 1.1e-21 1
UNIPROTKB|Q3T022 - symbol:SAP18 "Histone deacetylase comp... 253 1.1e-21 1
UNIPROTKB|O00422 - symbol:SAP18 "Histone deacetylase comp... 253 1.1e-21 1
UNIPROTKB|I3LF36 - symbol:SAP18 "Uncharacterized protein"... 253 1.1e-21 1
RGD|1310388 - symbol:Sap18 "Sin3-associated polypeptide 1... 252 1.5e-21 1
FB|FBgn0024491 - symbol:Bin1 "Bicoid interacting protein ... 233 1.5e-19 1
GENEDB_PFALCIPARUM|MAL7P1.37 - symbol:MAL7P1.37 "sin3 ass... 157 2.6e-10 1
UNIPROTKB|Q8IBX6 - symbol:MAL7P1.37 "Sin3 associated poly... 157 2.6e-10 1
>TAIR|locus:2043704 [details] [associations]
symbol:SAP18 "SIN3 associated polypeptide P18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IEP] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] GO:GO:0009737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006355 GO:GO:0009651 GO:GO:0006351
EMBL:AC003680 EMBL:AF378876 EMBL:AY050474 EMBL:AY088934
EMBL:AK227453 IPI:IPI00531442 PIR:T00877 RefSeq:NP_566050.1
UniGene:At.25070 ProteinModelPortal:O64644 SMR:O64644 IntAct:O64644
STRING:O64644 PaxDb:O64644 PRIDE:O64644 EnsemblPlants:AT2G45640.1
GeneID:819172 KEGG:ath:AT2G45640 TAIR:At2g45640 eggNOG:NOG249491
HOGENOM:HOG000238745 InParanoid:O64644 KO:K14324 OMA:DISITPP
PhylomeDB:O64644 ProtClustDB:CLSN2688947 Genevestigator:O64644
GermOnline:AT2G45640 InterPro:IPR017250 InterPro:IPR010516
PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637 Uniprot:O64644
Length = 152
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 77/102 (75%), Positives = 86/102 (84%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
EPVDREKTCPLLLRVFTK GGHH+ ED+AVRGKEPKDEVQIYTWKDA+LRELTDLVKEV+
Sbjct: 31 EPVDREKTCPLLLRVFTKSGGHHTSEDYAVRGKEPKDEVQIYTWKDASLRELTDLVKEVS 90
Query: 95 PAARRRDARLSFAFVYPDKNGRFMVREVSHSSLTVSYLGHDQ 136
AARRR+ARLSFAFVYP+ G + VREV T++Y Q
Sbjct: 91 VAARRRNARLSFAFVYPNNKGGYNVREVGE---TMAYPNRKQ 129
>UNIPROTKB|G3X7E1 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005886
GO:GO:0005634 KO:K14324 OMA:DISITPP InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
RefSeq:NP_001030544.2 UniGene:Bt.48904 GeneID:615692
KEGG:bta:615692 CTD:10284 NextBio:20899743
GeneTree:ENSGT00390000003152 EMBL:DAAA02033233
Ensembl:ENSBTAT00000024791 Uniprot:G3X7E1
Length = 172
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 56/122 (45%), Positives = 67/122 (54%)
Query: 2 AGVGEAQRRQAXXXXXXXXXXXXXXXXXXXXXFEPVDREKTCPLLLRVFTKIGGHHSRED 61
AGVG R A +P+DREKTCPLLLRVFT G H R D
Sbjct: 4 AGVGGQSERLAGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMD 63
Query: 62 FAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDARLSFAFVYPD-KNGRFMVR 120
RG P E+QIYTW DATL+ELT LVKEV P AR++ +FA V+ D K + V+
Sbjct: 64 EFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVK 123
Query: 121 EV 122
E+
Sbjct: 124 EI 125
>UNIPROTKB|Q90ZH5 [details] [associations]
symbol:chSAP18 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] GO:GO:0005886 GO:GO:0005634
eggNOG:NOG249491 HOGENOM:HOG000238745 KO:K14324 OMA:DISITPP
InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 CTD:10284 HOVERGEN:HBG003465
OrthoDB:EOG44MXTB GeneTree:ENSGT00390000003152 EMBL:AADN02005103
EMBL:AB052899 IPI:IPI00587707 RefSeq:NP_989643.1 UniGene:Gga.1083
SMR:Q90ZH5 STRING:Q90ZH5 Ensembl:ENSGALT00000027671 GeneID:374206
KEGG:gga:374206 InParanoid:Q90ZH5 NextBio:20813710 Uniprot:Q90ZH5
Length = 153
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/89 (56%), Positives = 61/89 (68%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
+P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 95 PAARRRDARLSFAFVYPD-KNGRFMVREV 122
P AR++ +FA V+ D K + V+E+
Sbjct: 78 PEARKKGTHFNFAIVFTDLKRPGYRVKEI 106
>UNIPROTKB|Q3T022 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 eggNOG:NOG249491
HOGENOM:HOG000238745 KO:K14324 InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
EMBL:BC102603 IPI:IPI00688908 RefSeq:NP_001030544.2
UniGene:Bt.48904 ProteinModelPortal:Q3T022 SMR:Q3T022 STRING:Q3T022
PRIDE:Q3T022 GeneID:615692 KEGG:bta:615692 CTD:10284
HOVERGEN:HBG003465 InParanoid:Q3T022 OrthoDB:EOG44MXTB
NextBio:20899743 Uniprot:Q3T022
Length = 153
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/89 (56%), Positives = 61/89 (68%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
+P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 95 PAARRRDARLSFAFVYPD-KNGRFMVREV 122
P AR++ +FA V+ D K + V+E+
Sbjct: 78 PEARKKGTHFNFAIVFTDLKRPGYRVKEI 106
>UNIPROTKB|O00422 [details] [associations]
symbol:SAP18 "Histone deacetylase complex subunit SAP18"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0003714
"transcription corepressor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
EMBL:U96915 EMBL:AF153608 GO:GO:0005886 GO:GO:0005737 GO:GO:0003714
Pathway_Interaction_DB:telomerasepathway EMBL:CH471075
GO:GO:0006357 GO:GO:0006351 TCDB:3.A.18.1.1
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000118
EMBL:AL158032 eggNOG:NOG249491 HOGENOM:HOG000238745 KO:K14324
InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 CTD:10284 HOVERGEN:HBG003465
OrthoDB:EOG44MXTB EMBL:U78303 EMBL:AY550970 EMBL:CR457035
EMBL:AK311748 EMBL:BC030836 IPI:IPI00011698 RefSeq:NP_005861.2
UniGene:Hs.524899 PDB:2HDE PDBsum:2HDE ProteinModelPortal:O00422
SMR:O00422 DIP:DIP-33590N IntAct:O00422 MINT:MINT-5002140
STRING:O00422 PhosphoSite:O00422 PaxDb:O00422 PeptideAtlas:O00422
PRIDE:O00422 DNASU:10284 Ensembl:ENST00000382533 GeneID:10284
KEGG:hsa:10284 UCSC:uc001uns.3 GeneCards:GC13P021714
H-InvDB:HIX0011163 HGNC:HGNC:10530 HPA:CAB012273 HPA:HPA011352
MIM:602949 neXtProt:NX_O00422 PharmGKB:PA34940 InParanoid:O00422
PhylomeDB:O00422 ChiTaRS:SAP18 EvolutionaryTrace:O00422
GenomeRNAi:10284 NextBio:38964 Bgee:O00422 CleanEx:HS_SAP18
Genevestigator:O00422 GermOnline:ENSG00000150459 Uniprot:O00422
Length = 153
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/89 (56%), Positives = 61/89 (68%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
+P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 95 PAARRRDARLSFAFVYPD-KNGRFMVREV 122
P AR++ +FA V+ D K + V+E+
Sbjct: 78 PEARKKGTHFNFAIVFTDVKRPGYRVKEI 106
>UNIPROTKB|I3LF36 [details] [associations]
symbol:SAP18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005886 GO:GO:0005634 KO:K14324
OMA:DISITPP InterPro:IPR017250 InterPro:IPR010516 PANTHER:PTHR13082
Pfam:PF06487 PIRSF:PIRSF037637 GeneTree:ENSGT00390000003152
EMBL:CU467900 RefSeq:XP_003357847.1 ProteinModelPortal:I3LF36
SMR:I3LF36 Ensembl:ENSSSCT00000028302 GeneID:100623258
KEGG:ssc:100623258 Uniprot:I3LF36
Length = 153
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/89 (56%), Positives = 61/89 (68%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
+P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 95 PAARRRDARLSFAFVYPD-KNGRFMVREV 122
P AR++ +FA V+ D K + V+E+
Sbjct: 78 PEARKKGTHFNFAIVFTDLKRPGYRVKEI 106
>RGD|1310388 [details] [associations]
symbol:Sap18 "Sin3-associated polypeptide 18" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] RGD:1310388 eggNOG:NOG249491
HOGENOM:HOG000238745 KO:K14324 OMA:DISITPP InterPro:IPR017250
InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637
CTD:10284 HOVERGEN:HBG003465 OrthoDB:EOG44MXTB
GeneTree:ENSGT00390000003152 EMBL:BC104706 IPI:IPI00952210
RefSeq:NP_001028857.2 UniGene:Rn.74373 SMR:Q3MHS8 STRING:Q3MHS8
Ensembl:ENSRNOT00000028179 GeneID:290284 KEGG:rno:290284
UCSC:RGD:1310388 InParanoid:Q3MHS8 NextBio:630865
Genevestigator:Q3MHS8 Uniprot:Q3MHS8
Length = 153
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 50/89 (56%), Positives = 61/89 (68%)
Query: 35 EPVDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVA 94
+P+DREKTCPLLLRVFT G H R D RG P E+QIYTW DATL+ELT LVKEV
Sbjct: 18 KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77
Query: 95 PAARRRDARLSFAFVYPD-KNGRFMVREV 122
P AR++ +FA V+ D K + V+E+
Sbjct: 78 PEARKKGTHFNFAIVFMDLKRPGYRVKEI 106
>FB|FBgn0024491 [details] [associations]
symbol:Bin1 "Bicoid interacting protein 1" species:7227
"Drosophila melanogaster" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003714 "transcription
corepressor activity" evidence=IGI;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016580 "Sin3 complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0006342 "chromatin silencing" evidence=IGI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] EMBL:AE014297 GO:GO:0007275
GO:GO:0003714 GO:GO:0006351 GO:GO:0006342 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 CTD:274 GO:GO:0016580 eggNOG:NOG249491
KO:K14324 OMA:DISITPP InterPro:IPR017250 InterPro:IPR010516
PANTHER:PTHR13082 Pfam:PF06487 PIRSF:PIRSF037637 EMBL:AF297546
EMBL:AY070913 EMBL:BT025229 EMBL:AJ278500 RefSeq:NP_524377.1
UniGene:Dm.20197 ProteinModelPortal:Q9VEX9 SMR:Q9VEX9
DIP:DIP-19160N IntAct:Q9VEX9 MINT:MINT-806704 STRING:Q9VEX9
PaxDb:Q9VEX9 PRIDE:Q9VEX9 EnsemblMetazoa:FBtr0083279 GeneID:41965
KEGG:dme:Dmel_CG6046 FlyBase:FBgn0024491
GeneTree:ENSGT00390000003152 InParanoid:Q9VEX9 OrthoDB:EOG4BVQ9X
PhylomeDB:Q9VEX9 GenomeRNAi:41965 NextBio:826507 Bgee:Q9VEX9
GermOnline:CG6046 Uniprot:Q9VEX9
Length = 150
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 44/87 (50%), Positives = 60/87 (68%)
Query: 37 VDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA 96
+DREKTCP+LLRVF G HHS ++ G P +E+QIYTW+DATL ELT LV++V P
Sbjct: 18 IDREKTCPMLLRVFCSTGRHHSVSEYMF-GNVPTNELQIYTWQDATLHELTSLVRDVNPD 76
Query: 97 ARRRDARLSFAFVYPD-KNGRFMVREV 122
R++ FA VYP+ ++ F +RE+
Sbjct: 77 TRKKGTYFDFAVVYPNFRSNHFQMREI 103
>GENEDB_PFALCIPARUM|MAL7P1.37 [details] [associations]
symbol:MAL7P1.37 "sin3 associated polypeptide
p18-like protein" species:5833 "Plasmodium falciparum" [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] GO:GO:0003714 GO:GO:0006357 GO:GO:0000118
EMBL:AL844506 InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487
RefSeq:XP_001349027.1 ProteinModelPortal:Q8IBX6 IntAct:Q8IBX6
MINT:MINT-1654748 EnsemblProtists:MAL7P1.37:mRNA GeneID:2655210
KEGG:pfa:MAL7P1.37 EuPathDB:PlasmoDB:PF3D7_0711400 OMA:HHKHGHG
ProtClustDB:CLSZ2514865 Uniprot:Q8IBX6
Length = 728
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 37 VDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPK-DEVQIYTWKDATLRELTDLVKEVAP 95
++REKTCP LLR+F K+ ++ +D + K+ +E+QIY W D T+RE+ LVK+
Sbjct: 608 INREKTCPFLLRLFYKVDKEYNVDDMDILTKDNNSNELQIYAWIDITMREIVTLVKDFYK 667
Query: 96 AARRRDARLSF-AFVYPDKNGRFMVREVSHSSL 127
+R+R+A+ F F Y K F+ + HS++
Sbjct: 668 DSRQRNAQWVFKVFSYEKKKLTFLSKV--HSTI 698
>UNIPROTKB|Q8IBX6 [details] [associations]
symbol:MAL7P1.37 "Sin3 associated polypeptide p18-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] GO:GO:0003714 GO:GO:0006357 GO:GO:0000118
EMBL:AL844506 InterPro:IPR010516 PANTHER:PTHR13082 Pfam:PF06487
RefSeq:XP_001349027.1 ProteinModelPortal:Q8IBX6 IntAct:Q8IBX6
MINT:MINT-1654748 EnsemblProtists:MAL7P1.37:mRNA GeneID:2655210
KEGG:pfa:MAL7P1.37 EuPathDB:PlasmoDB:PF3D7_0711400 OMA:HHKHGHG
ProtClustDB:CLSZ2514865 Uniprot:Q8IBX6
Length = 728
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 37 VDREKTCPLLLRVFTKIGGHHSREDFAVRGKEPK-DEVQIYTWKDATLRELTDLVKEVAP 95
++REKTCP LLR+F K+ ++ +D + K+ +E+QIY W D T+RE+ LVK+
Sbjct: 608 INREKTCPFLLRLFYKVDKEYNVDDMDILTKDNNSNELQIYAWIDITMREIVTLVKDFYK 667
Query: 96 AARRRDARLSF-AFVYPDKNGRFMVREVSHSSL 127
+R+R+A+ F F Y K F+ + HS++
Sbjct: 668 DSRQRNAQWVFKVFSYEKKKLTFLSKV--HSTI 698
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 140 119 0.00091 102 3 11 22 0.47 30
29 0.47 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 549 (58 KB)
Total size of DFA: 116 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.84u 0.19s 12.03t Elapsed: 00:00:01
Total cpu time: 11.84u 0.19s 12.03t Elapsed: 00:00:01
Start: Sat May 11 06:31:20 2013 End: Sat May 11 06:31:21 2013