BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032487
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31582|RAF2A_ARATH Ras-related protein RABF2a OS=Arabidopsis thaliana GN=RABF2A PE=1
SV=1
Length = 200
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/136 (95%), Positives = 135/136 (99%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA++GNKNINAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAE 136
AGNKADLLDARKV+AE
Sbjct: 121 AGNKADLLDARKVSAE 136
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 128/136 (94%), Positives = 133/136 (97%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA GNK+INAKLVLLGDVGAGKSSLVLRFVK QF+EFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASFERAKKWVQELQAQGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAE 136
AGNK+DLLDARKVTAE
Sbjct: 121 AGNKSDLLDARKVTAE 136
>sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2
SV=1
Length = 200
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 118/136 (86%), Positives = 127/136 (93%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA++ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1 MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAE 136
AGNKADL D RKVTAE
Sbjct: 121 AGNKADLEDRRKVTAE 136
>sp|P29687|RAB5_TOBAC Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1
Length = 200
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/136 (84%), Positives = 125/136 (91%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
MA+ + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1 MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMAL 120
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+ S RAKKWVQELQ QGNPNMVMAL
Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120
Query: 121 AGNKADLLDARKVTAE 136
AGNKADL D RKVTAE
Sbjct: 121 AGNKADLEDKRKVTAE 136
>sp|Q06AU6|RAB5A_PIG Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1
Length = 215
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|P61271|RAB5A_MACFA Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2
SV=1
Length = 215
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|P20339|RAB5A_HUMAN Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2
Length = 215
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|P18066|RAB5A_CANFA Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1
Length = 215
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|Q0IIG7|RAB5A_BOVIN Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1
Length = 215
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|Q9CQD1|RAB5A_MOUSE Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1
Length = 215
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 110/130 (84%)
Query: 4 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEI 63
TGNK KLVLLG+ GKSSLVLRFVKGQF EFQESTIGAAF +QT+ ++D TVKFEI
Sbjct: 14 TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGN 123
WDTAGQERYHSLAPMYYRGA AAI+VYDITN+ SF RAK WV+ELQ Q +PN+V+AL+GN
Sbjct: 74 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 133
Query: 124 KADLLDARKV 133
KADL + R V
Sbjct: 134 KADLANKRAV 143
>sp|P51147|RAB5C_CANFA Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1
Length = 216
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>sp|P35278|RAB5C_MOUSE Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2
Length = 216
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>sp|Q58DS9|RAB5C_BOVIN Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1
Length = 216
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>sp|Q5R7L7|RAB5C_PONAB Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1
Length = 216
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>sp|P51148|RAB5C_HUMAN Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2
Length = 216
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLASKRAV 144
>sp|Q86JP3|RAB5A_DICDI Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A
PE=3 SV=1
Length = 201
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Query: 6 NKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
NK KLVLLG+ GKSSLVLRFV+G F+++QESTIGAAF +QT+ +ND TVKFEIWD
Sbjct: 5 NKIFQFKLVLLGEAAVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWD 64
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERYH+LAPMYYRGA AAI+VYDI ++ SFERA KWV+ELQ QG+PN+V+ALAGNK
Sbjct: 65 TAGQERYHTLAPMYYRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKL 124
Query: 126 DLLDARKV-TAEA 137
DL RKV TAEA
Sbjct: 125 DLAAKRKVETAEA 137
>sp|Q98932|RAB5C_CHICK Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1
Length = 216
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%)
Query: 5 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIW 64
GNK KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEIW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNK 124
DTAGQERYHSLAPMYYRGA AAI+VYDITN +F RAK WV+ELQ Q +PN+V+ALAGNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNK 135
Query: 125 ADLLDARKV 133
ADL R V
Sbjct: 136 ADLATKRAV 144
>sp|Q5RBG1|RAB5B_PONAB Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1
Length = 215
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 107/125 (85%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAE 136
V E
Sbjct: 142 MVEYE 146
>sp|P61021|RAB5B_MOUSE Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1
Length = 215
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 107/125 (85%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAE 136
V E
Sbjct: 142 MVEYE 146
>sp|P61020|RAB5B_HUMAN Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1
Length = 215
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 107/125 (85%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL + R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 141
Query: 132 KVTAE 136
V E
Sbjct: 142 MVEYE 146
>sp|Q5ZHW4|RAB5B_CHICK Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1
Length = 215
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 106/125 (84%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSSLVLRFVKGQF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
YHSLAPMYYRGA AAI+VYDITNQ +F RAK WV+ELQ Q +P++V+ALAGNKADL R
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKR 141
Query: 132 KVTAE 136
V E
Sbjct: 142 MVEYE 146
>sp|Q9CB01|RABF1_ARATH Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1
SV=1
Length = 202
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Query: 7 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65
KN+ KLVLLGD G GKS +VLRFV+GQF + T+GA+F SQT+A+ D+T VKFEIWD
Sbjct: 30 KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Query: 66 TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKA 125
TAGQERY +LAP+YYRGA A+IVYDIT+ SF++A+ WV+ELQ G+P++VMAL GNKA
Sbjct: 90 TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149
Query: 126 DLLDARKVTAE 136
DL + R+V E
Sbjct: 150 DLHEKREVPTE 160
>sp|P36586|YPT5_SCHPO GTP-binding protein ypt5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt5 PE=1 SV=1
Length = 211
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
Query: 2 ATTGNKN---INAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDAT 58
+ T KN IN KLVLLGD GKSSLVLRFVK QF +++ESTIGAAF +QTL +++ T
Sbjct: 3 SNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENT 62
Query: 59 -VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMV 117
VK EIWDTAGQERY SLAPMYYR A AI+VYDIT AS E+AK W++ELQ Q +V
Sbjct: 63 SVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIV 122
Query: 118 MALAGNKADLLDARK 132
+ALAGNK DL R+
Sbjct: 123 IALAGNKLDLAQERR 137
>sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1
Length = 194
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 90/122 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=1 SV=2
Length = 194
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 90/122 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1
Length = 194
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 90/122 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+HSLAPMYYRG+AAA+IVYDIT Q SF KKWV+EL+ G N+VMA+AGNK DL D R
Sbjct: 67 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|P36017|VPS21_YEAST Vacuolar protein sorting-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS21 PE=1
SV=1
Length = 210
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 94/128 (73%), Gaps = 3/128 (2%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG+ GKSS+VLRFV F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER
Sbjct: 9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 68
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD-- 129
+ SLAPMYYR A AA++VYD+T SF +A+ WV+EL Q + ++++AL GNK D+L
Sbjct: 69 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 128
Query: 130 -ARKVTAE 136
RKV E
Sbjct: 129 GERKVARE 136
>sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2
Length = 194
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 90/122 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2
Length = 194
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 89/122 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQER
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G P++V+A+AGNK DL D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|P51154|RB22A_CANFA Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1
Length = 194
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 89/122 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+ LLGD G GKSS+V RFV+ F TIGA+F ++T+ + KF IWDTAGQE
Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEA 66
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ +LAPMYYRG+AAAIIVYDIT + +F K WV+EL+ G PN+V+A+AGNK DL+D R
Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVR 126
Query: 132 KV 133
+V
Sbjct: 127 EV 128
>sp|Q54RX9|RAB5B_DICDI Putative ras-related protein Rab-5B OS=Dictyostelium discoideum
GN=rab5B PE=5 SV=1
Length = 214
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVLLG++ GK+ + R V+ +F +STIGAAF +++ V++ +K EIWDTAGQER
Sbjct: 51 KLVLLGEMNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQER 109
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y SL PMYYRGAAAA++VYDIT + +FE K+WV ELQ +PN+++ALAGNK DL
Sbjct: 110 YRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL 165
>sp|P36018|YPT52_YEAST GTP-binding protein YPT52 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT52 PE=1 SV=1
Length = 234
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 91/126 (72%), Gaps = 9/126 (7%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVN--------DATVKFEI 63
KLVLLGD GKSS+V RFVK F E +ESTIGAAF SQ++ ++ D +KFEI
Sbjct: 5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEI 64
Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAG 122
WDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L G
Sbjct: 65 WDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLG 124
Query: 123 NKADLL 128
NK DL
Sbjct: 125 NKVDLC 130
>sp|P36019|YPT53_YEAST GTP-binding protein YPT53 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT53 PE=1 SV=1
Length = 220
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 88/118 (74%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VLLG+ GKSS+VLRFV F E +E TIGAAF ++ + + +KFEIWDTAGQER
Sbjct: 14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD 129
+ LAPMYYR A AA++V+D+TN+ SF +A+ WV+EL + ++V+AL GNK DLL+
Sbjct: 74 FAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLN 131
>sp|P17608|RYH1_SCHPO GTP-binding protein ryh1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ryh1 PE=1 SV=1
Length = 201
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 87/125 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLV LG+ GK+SL+ RF+ QF ++TIG F S+T+ + D TV+ ++WDTAGQER
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 72
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
+ SL P Y R ++ AIIVYDITN SF +KW+++++A+ ++++ L GNK DL D R
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKR 132
Query: 132 KVTAE 136
+VT E
Sbjct: 133 QVTQE 137
>sp|Q99260|YPT6_YEAST GTP-binding protein YPT6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT6 PE=1 SV=1
Length = 215
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 94/137 (68%), Gaps = 1/137 (0%)
Query: 1 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVK 60
M+ +G K+V LG+ G GK+SL+ RF+ F + ++TIG F S+T+ ++D T++
Sbjct: 1 MSRSGKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIR 60
Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMA 119
++WDTAGQER+ SL P Y R + AIIVYDIT + SFE KW+++++ +G+ N+++
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILC 120
Query: 120 LAGNKADLLDARKVTAE 136
+ GNK+DL D R+++ E
Sbjct: 121 IVGNKSDLSDERQISTE 137
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 87/125 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQER
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131
Query: 132 KVTAE 136
V+ E
Sbjct: 132 AVSTE 136
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 85/116 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDL 130
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 87/125 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQER 75
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R
Sbjct: 76 YRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLR 135
Query: 132 KVTAE 136
V+ E
Sbjct: 136 AVSTE 140
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 88/125 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLR 133
Query: 132 KVTAE 136
V+ E
Sbjct: 134 AVSEE 138
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 85/116 (73%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F +++L VN+ +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y ++ YYRGA A++VYD+T ++FE ++W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDL 130
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 84/116 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDL 130
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 84/116 (72%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF K +F +STIG F +++L V+D +K +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y ++ YYRGA A++VYD+T ++FE + W++EL+ +PN+V+ L GNK+DL
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL 130
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQER
Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL 127
Y ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL
Sbjct: 75 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDL 130
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 86/125 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +FE +W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 132 KVTAE 136
V E
Sbjct: 134 SVADE 138
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 88/125 (70%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ ++W++EL+ + N+V+ +AGNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 132 KVTAE 136
V+ +
Sbjct: 134 AVSED 138
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 86/125 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ + N+V+ GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLR 134
Query: 132 KVTAE 136
V+ E
Sbjct: 135 AVSTE 139
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 83/125 (66%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R
Sbjct: 74 YRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLR 133
Query: 132 KVTAE 136
V E
Sbjct: 134 AVATE 138
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 86/125 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GK++++ RF + +F +STIG F ++TL V TVK +IWDTAGQER
Sbjct: 14 KIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ +AGNKADL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLR 133
Query: 132 KVTAE 136
V E
Sbjct: 134 SVAEE 138
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 87/127 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQER
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 73
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNK+DL R
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLR 133
Query: 132 KVTAEAS 138
V E +
Sbjct: 134 DVQTEVA 140
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 86/125 (68%)
Query: 12 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V++ VK +IWDTAGQER
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 72 YHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDAR 131
Y ++ YYRGA A++VYD+T +FE ++W++EL+ N+V+ L GNKADL R
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLR 134
Query: 132 KVTAE 136
V+ E
Sbjct: 135 AVSTE 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,324,762
Number of Sequences: 539616
Number of extensions: 1481341
Number of successful extensions: 7993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 211
Number of HSP's that attempted gapping in prelim test: 6351
Number of HSP's gapped (non-prelim): 1233
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)