BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032490
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15091 PE=3 SV=1
Length = 542
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
G D+ GR ++ GK+FPA+ + +E YL + + P + K + + Y HT + + N+
Sbjct: 390 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDP-IVKGDYVISYFHT-LTSTNNYP 447
Query: 85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARL 118
+ LR +Y +P K+NL+A Y VHP ++
Sbjct: 448 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM 481
>sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2
SV=1
Length = 540
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
G D+ GR ++ GK+FPA+ + +E YL + + P + K + + Y HT + + N+
Sbjct: 388 GVDRLGRPVIVFCGKWFPAQNIDLEKALLYLIKLLDP-IVKGDYVISYFHT-LTSTNNYP 445
Query: 85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARL 118
+ LR +Y +P K+NL+A Y VHP ++
Sbjct: 446 SLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKM 479
>sp|Q9DBL2|GDAP2_MOUSE Ganglioside-induced differentiation-associated protein 2 OS=Mus
musculus GN=Gdap2 PE=2 SV=1
Length = 498
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 6 VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
+ ++ E+L D L+ G D GR ++ ++G+ P L+ ++ Y V +
Sbjct: 324 LCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHI 382
Query: 64 GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
K + ++Y HT + N L+ +YD + K NL+AVYFVHP ++++ F
Sbjct: 383 AVKEYVLVYFHT-LTSDYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFF 441
Query: 121 ATFG 124
TF
Sbjct: 442 TTFS 445
>sp|Q9NXN4|GDAP2_HUMAN Ganglioside-induced differentiation-associated protein 2 OS=Homo
sapiens GN=GDAP2 PE=2 SV=1
Length = 497
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 9 SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
SE I L+ G D GR ++ ++G+ P L+ ++ Y V + K +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 386
Query: 69 TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFG 124
++Y HT + N L+ +YD + K NL+AVYFVHP ++++ F TF
Sbjct: 387 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFS 444
>sp|Q2KIX2|GDAP2_BOVIN Ganglioside-induced differentiation-associated protein 2 OS=Bos
taurus GN=GDAP2 PE=2 SV=1
Length = 497
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 6 VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
+ ++ E+L D L+ G D GR ++ ++G+ P L+ ++ Y V +
Sbjct: 323 LCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHI 381
Query: 64 GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
K + ++Y HT + N L+ +YD + K NL+AVYFVHP ++++ F
Sbjct: 382 AVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFF 440
Query: 121 ATFG 124
TF
Sbjct: 441 TTFS 444
>sp|Q5CZL1|GDAP2_XENTR Ganglioside-induced differentiation-associated protein 2 OS=Xenopus
tropicalis PE=2 SV=1
Length = 496
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 6 VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
+S + E+L D L+ G D GR ++ ++G+ P L+ +E Y + +
Sbjct: 322 LSRARTEDLSDIAALKALYQSGVDNCGRTVMVVVGRNIPVLLIDMEKALLYFI-HMMDHV 380
Query: 64 GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
K + ++Y HT + N L+++YD + K+NL+A+YFVHP ++++ F
Sbjct: 381 AAKEYVLVYFHT-LTGEHNHPDSDFLKNMYDIVDVKYKKNLKALYFVHPTFRSKVSSWFF 439
Query: 121 ATF 123
TF
Sbjct: 440 TTF 442
>sp|Q4R678|GDAP2_MACFA Ganglioside-induced differentiation-associated protein 2 OS=Macaca
fascicularis GN=GDAP2 PE=2 SV=1
Length = 461
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 6 VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
+ ++ E+L D L+ G D GR ++ ++G+ P L+ ++ Y V +
Sbjct: 287 LCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHI 345
Query: 64 GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
K + ++Y HT + N L+ +YD + K NL+AVYFVHP ++++ F
Sbjct: 346 AVKEYVLVYFHT-LTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFF 404
Query: 121 ATFG 124
TF
Sbjct: 405 TTFS 408
>sp|Q66HX8|GDAP2_DANRE Ganglioside-induced differentiation-associated protein 2 OS=Danio
rerio GN=gdap2 PE=2 SV=1
Length = 504
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
G D GR ++ ++G+ P L+ +E Y V + K + ++Y HT + N
Sbjct: 353 GVDLCGRTVMVVVGRNIPVMLIDMEKALLYFI-HVMDHITVKEYVMVYFHT-LTGEHNHL 410
Query: 85 GISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFG 124
L+ +YD + A K+NL+A YFVHP ++++ F TF
Sbjct: 411 DTDFLKKLYDIVDAKFKKNLRAFYFVHPTFRSKVSTWFFTTFS 453
>sp|Q5XGM5|GDAP2_XENLA Ganglioside-induced differentiation-associated protein 2 OS=Xenopus
laevis PE=2 SV=1
Length = 496
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 6 VSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRL 63
+S + E+L D L+ G D GR ++ ++G+ P L+ +E Y + +
Sbjct: 322 LSRARTEDLSDIAALKALYQSGVDNCGRSVMVVVGRNIPVLLIDMEKALLYFI-HMMDHV 380
Query: 64 GKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FL 120
K + ++Y HT + N L+++YD I K+NL+A+YFVHP ++++ F
Sbjct: 381 TAKDYVLVYFHT-LTGEHNHLDSDFLKNMYDIIDVKYKKNLKALYFVHPTFRSKVSTWFF 439
Query: 121 ATF 123
TF
Sbjct: 440 TTF 442
>sp|Q66H63|GDAP2_RAT Ganglioside-induced differentiation-associated-protein 2 OS=Rattus
norvegicus GN=Gdap2 PE=2 SV=1
Length = 497
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 9 SEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAF 68
SE I L+ G D GR ++ ++G+ P L+ ++ Y V + K +
Sbjct: 328 SEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFI-HVMDHIAVKEY 386
Query: 69 TVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATFG 124
++Y HT + N L+ +YD + K NL+AVYFVHP ++++ F TF
Sbjct: 387 VLVYFHT-LTSEYNHLDSDFLKKLYDVVDIKYKRNLKAVYFVHPTFRSKVSTWFFTTFS 444
>sp|Q54TH9|GACY_DICDI Rho GTPase-activating protein gacY OS=Dictyostelium discoideum
GN=gacY PE=3 SV=1
Length = 721
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 7 SESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKK 66
S+S++ I+ L G+D GR I+ II P R + +E + Y + P + ++
Sbjct: 362 SKSQRFPEIEALNFIYPAGKDNLGRTIIVIIASHLPVREMDMERVLLYTISIMDPVV-EE 420
Query: 67 AFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATF 123
+ ++YVHT + S N ++ ++ +Y K+NL+ +Y VHP + L F
Sbjct: 421 EYVLVYVHTNMNNS-NKPSMAWMKKVYTIFNRKYKKNLKGLYIVHPTTWIKFTLGIF 476
>sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1
SV=1
Length = 439
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 15 IDRLEIFKIHGRDKQGRKILRIIG-KFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYV 73
I R +I ++ G DK GRKI+ + P+ L L YL + + + +T+LY+
Sbjct: 67 IARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYL-KHTLDQYVESDYTLLYL 125
Query: 74 HTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRL 126
H G+ S+N +S LR Y K+N++A+Y VHP + + L F L
Sbjct: 126 HHGLT-SDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL 177
>sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1
SV=1
Length = 439
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 15 IDRLEIFKIHGRDKQGRKILRIIG-KFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYV 73
I R +I ++ G DK GRKI+ + P+ L L YL + + + +T+LY+
Sbjct: 67 IARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYL-KHTLDQYVESDYTLLYL 125
Query: 74 HTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRL 126
H G+ S+N +S LR Y K+N++A+Y VHP + + L F L
Sbjct: 126 HHGLT-SDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL 177
>sp|Q9CXP4|RHG08_MOUSE Rho GTPase-activating protein 8 OS=Mus musculus GN=Arhgap8 PE=2
SV=3
Length = 425
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 15 IDRLEIFKIHGRDKQGRKILRIIGKFFPA-------RLLSVEVLKRYLSERVYPRLGKKA 67
+ R I ++ G D+QGR+I P RLL E LK L + V +
Sbjct: 17 VARHGILQVAGDDRQGRRIFTFSCCRLPPLHQLNHQRLL--EYLKYTLDQHV-----END 69
Query: 68 FTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLATFGRLF 127
+T++Y H G+ S+N + L++ Y K+NL+A+Y VHP + F L
Sbjct: 70 YTIVYFHYGLS-SQNKPSLGWLQNTYKEFDRKYKKNLKALYVVHPTSLIKALWNIFKPLI 128
Query: 128 FNGVG 132
+ G
Sbjct: 129 SHKFG 133
>sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1
Length = 502
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 17 RLEIFKIHGRDKQGRKILRIIGKFFPARLLSV-EVLKRYLSERVYPRLGKKAFTVLYVHT 75
R +I G D GR ++ + + F A+ + + + ++S V R+ + + V+Y HT
Sbjct: 338 RQKILYQSGVDFLGRPVVVFVARHFTAQNTDLGKAVAYFIS--VLDRIVNRDYVVVYFHT 395
Query: 76 GVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARL---FLATF 123
EN +S L+ +Y + + NL+A Y VHP + AR+ F TF
Sbjct: 396 H-STEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTTF 445
>sp|Q9VTU3|RG68F_DROME Rho GTPase-activating protein 68F OS=Drosophila melanogaster
GN=RhoGAP68F PE=1 SV=1
Length = 476
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 25 GRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFA 84
G DKQGR I I FP + +E R + + + P + + + ++Y H G+ + +N
Sbjct: 105 GTDKQGRHIFGIYASRFPEKS-QLEGFVREIIKEIEPFV-ENDYILVYFHQGL-KEDNKP 161
Query: 85 GISALRSIYDAIPANVKENLQAVYFVHP 112
L + Y + N ++NL+ +Y VHP
Sbjct: 162 SAQFLWNSYKELDRNFRKNLKTLYVVHP 189
>sp|Q9CHE0|SYM_LACLA Methionine--tRNA ligase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=metG PE=3 SV=1
Length = 662
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 6 VSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGK 65
V E E E D+L FK+ D + R+IL I +F+P E++ + L ++ L
Sbjct: 570 VLEVEPVEGSDKLLRFKLDAGDSEPRQILSGIAQFYPNEQ---ELVGKKL--QIVANLKP 624
Query: 66 KAFTVLYVHTGVQRSENFAGISALRSIYDAIPA 98
+ YV G+ S F G ++ ++ D +PA
Sbjct: 625 RKMMKKYVSQGMILSAEFDGKLSVLTVDDDVPA 657
>sp|Q54PT1|GDAP2_DICDI Protein GDAP2 homolog OS=Dictyostelium discoideum GN=gdap2 PE=3
SV=1
Length = 568
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 5 VVSESEQEELID--RLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPR 62
+++ S+ E+L D RL F + D Q R I+ IIG +R + + YL +
Sbjct: 392 LLTRSKVEDLSDVSRLN-FTLQTTDDQNRPIVVIIGSQLNSRKDLYDQVLLYLIRVLEQT 450
Query: 63 LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPG--LQARLFL 120
+ + F+++Y H+ + S+ +S L+ + + L+ VHP L+ LF+
Sbjct: 451 IQRGNFSIIYFHSNMS-SQQSPDLSWLKKLLEIFELKYNNYLKDFNIVHPTFLLKTTLFI 509
Query: 121 A 121
+
Sbjct: 510 S 510
>sp|Q30S64|HIS1_SULDN ATP phosphoribosyltransferase OS=Sulfurimonas denitrificans (strain
ATCC 33889 / DSM 1251) GN=hisG PE=3 SV=1
Length = 209
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 28 KQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSEN 82
K K++ I ++F R +SV+++K Y S + P +G V V TG +N
Sbjct: 108 KVASKMVNITKRYFEERAVSVDIIKLYGSIELAPLIGLADMIVDVVETGSTMKQN 162
>sp|B4U858|HIS1_HYDS0 ATP phosphoribosyltransferase OS=Hydrogenobaculum sp. (strain
Y04AAS1) GN=hisG PE=3 SV=1
Length = 204
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 2 CSQVVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYP 61
CS VV+ + E+L D +KI K K + I FF + +S+ ++K S + P
Sbjct: 90 CSMVVA-GKPEKLGD----YKILHFTKVATKYVNIARSFFEGKDVSINIIKLNGSVEIAP 144
Query: 62 RLGKKAFTVLYVHTGVQRSENFAGISALRSIYDA 95
+G + V TG EN G+ + I+D+
Sbjct: 145 IIGLSDYIVDITQTGKTLKEN--GLIVMEKIFDS 176
>sp|Q7VJU4|HIS1_HELHP ATP phosphoribosyltransferase OS=Helicobacter hepaticus (strain
ATCC 51449 / 3B1) GN=hisG PE=3 SV=1
Length = 205
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 28 KQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSEN 82
K K+ I K+F + +S+E LK Y S + P +G V V TGV +N
Sbjct: 108 KIATKMPHITRKYFSNKAISIEALKLYGSIELAPLVGLSDAIVDIVETGVTMKQN 162
>sp|A6Q7C5|HIS1_SULNB ATP phosphoribosyltransferase OS=Sulfurovum sp. (strain NBC37-1)
GN=hisG PE=3 SV=1
Length = 206
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 28 KQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSENFAGIS 87
K K++ I +F + + VEV+K Y S + P +G V V TG EN G+
Sbjct: 108 KVATKMVNIAKNYFAQKAVGVEVVKLYGSIELAPLVGLADAIVDIVETGNTMREN--GLK 165
Query: 88 ALRSIYDA 95
I D+
Sbjct: 166 VAEDIMDS 173
>sp|Q2RGV7|HIS1_MOOTA ATP phosphoribosyltransferase OS=Moorella thermoacetica (strain
ATCC 39073) GN=hisG PE=3 SV=1
Length = 228
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 23 IHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQRSEN 82
+ G + K R+ FF R L VE++K + + + PR G V V TG EN
Sbjct: 118 LAGSRRVATKFPRVAASFFQERGLPVEIIKLHGNIELAPRAGLADLIVDIVSTGRTLKEN 177
>sp|Q55BP5|TOP2_DICDI Probable DNA topoisomerase 2 OS=Dictyostelium discoideum GN=top2 PE=3
SV=1
Length = 1521
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 20 IFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERV---YPRLGKKAFTVLYV 73
+F GR ++ + FFP R+ ++ K +LSER+ Y RL KA +L V
Sbjct: 1097 VFDEEGRIQRFATTTALQEHFFPLRIKHYQMRKDFLSERLSEEYSRLSNKARFILAV 1153
>sp|P06786|TOP2_YEAST DNA topoisomerase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TOP2 PE=1 SV=2
Length = 1428
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 21 FKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQR 79
F HG+ K+ + I+ +F+ RL + K ++SER+ + K +F V ++ +++
Sbjct: 978 FDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEK 1036
>sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1
Length = 444
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 25/112 (22%)
Query: 5 VVSESEQEELIDRLEIFKIHGRDKQGRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLG 64
VV+E +E+I R E K RD+ G + +G +F + VLK + ER +P
Sbjct: 301 VVAEGAGQEMIPRNESQK-QERDESGNAVFLDVGVWFKS------VLKAWW-EREHP--- 349
Query: 65 KKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQA 116
+ FTV Y+ + A+PAN +NL H +
Sbjct: 350 DELFTVKYIDPTY--------------MIRAVPANATDNLYCTLLAHSAIHG 387
>sp|Q86WG3|ATCAY_HUMAN Caytaxin OS=Homo sapiens GN=ATCAY PE=1 SV=2
Length = 371
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 63 LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLA 121
L + + ++Y++ R GI L+ Y I +++NL+++ VHP R LA
Sbjct: 225 LVAEDYMIVYLNGATPR-RRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLA 282
>sp|Q9GKT0|ATCAY_MACFA Caytaxin OS=Macaca fascicularis GN=ATCAY PE=2 SV=1
Length = 371
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 63 LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLA 121
L + + ++Y++ R GI L+ Y I +++NL+++ VHP R LA
Sbjct: 225 LVAEDYMIVYLNGATPR-RRMPGIGWLKKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLA 282
>sp|Q8BHE3|ATCAY_MOUSE Caytaxin OS=Mus musculus GN=Atcay PE=1 SV=1
Length = 372
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 63 LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLA 121
L + + ++Y++ R GI L+ Y I +++NL+++ VHP R LA
Sbjct: 225 LVAEDYMIVYLNGATPR-RRMPGIGWLKKCYHMIDRRLRKNLKSLIIVHPSWFIRTVLA 282
>sp|E9Q414|APOB_MOUSE Apolipoprotein B-100 OS=Mus musculus GN=Apob PE=1 SV=1
Length = 4505
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 77 VQRSENFAGISALRSIYDAIPANVKENLQAV-YFVHPGLQ 115
V+ ENFAG + L+ IY N+K +LQ YF G Q
Sbjct: 3539 VEVGENFAGEATLQRIYTTWEHNMKNHLQVYSYFFTKGKQ 3578
>sp|Q1M168|ATCAY_RAT Caytaxin OS=Rattus norvegicus GN=Atcay PE=1 SV=1
Length = 372
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 63 LGKKAFTVLYVHTGVQRSENFAGISALRSIYDAIPANVKENLQAVYFVHPGLQARLFLA 121
L + + ++Y++ R GI L+ Y I +++NL+++ VHP R LA
Sbjct: 225 LVAEDYMIVYLNGATPR-RRMPGIGWLKKCYHMIDRRLRKNLKSLIIVHPSWFIRTVLA 282
>sp|A3GFE3|ATG18_PICST Autophagy-related protein 18 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG18 PE=3 SV=2
Length = 563
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 9 SEQEELID--RLEIFKIHGRDKQ--GRKILRIIGKFFPARLLSVEVLKRYLSERVYPRLG 64
++ E LID RL + ++ R Q GRK + +G F P+R S+ R+ + +G
Sbjct: 425 AKNEPLIDQNRLSVARLIRRSSQTLGRKAAQRMGDFLPSRFSSILEPTRHFASLKINAIG 484
Query: 65 KKAFTVLYVHTGVQ 78
K ++ ++ +Q
Sbjct: 485 KDVKSIAVMNNELQ 498
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 38 GKFFPARLLSVEVLKRYLSERVYPRLGKKAFTVLYVHTGVQ-RSENFAGISALRSIYDAI 96
G P ++ +++ + L E + P+L ++ V T +Q + ++FAG+ + + Y+A+
Sbjct: 2135 GDLGPDEIVEPQIIVQSLRETIAPKLVRED-----VATMLQIQEQDFAGVEYVPANYEAL 2189
Query: 97 PANVKENLQAVYFV 110
A ++E + +FV
Sbjct: 2190 TAAIREIAREQHFV 2203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,194,514
Number of Sequences: 539616
Number of extensions: 1728766
Number of successful extensions: 4738
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4715
Number of HSP's gapped (non-prelim): 33
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)