Your job contains 1 sequence.
>032493
MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRAVTCRKKDIHPQFYEDAKVYCNG
ELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIMEIPVLKG
EIVLPPKRKSAAAKGGKKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032493
(139 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018442 - symbol:emb2184 "embryo defective 218... 455 4.5e-43 1
TIGR_CMR|CJE_0151 - symbol:CJE_0151 "ribosomal protein L3... 108 2.6e-06 1
TIGR_CMR|CHY_2565 - symbol:CHY_2565 "ribosomal protein L3... 102 1.1e-05 1
TIGR_CMR|CBU_0905 - symbol:CBU_0905 "ribosomal protein L3... 100 1.9e-05 1
TIGR_CMR|DET_1327 - symbol:DET_1327 "ribosomal protein L3... 99 2.4e-05 1
TIGR_CMR|GSU_3107 - symbol:GSU_3107 "ribosomal protein L3... 94 8.1e-05 1
TIGR_CMR|SO_4120 - symbol:SO_4120 "ribosomal protein L31"... 87 0.00045 1
TIGR_CMR|SPO_3256 - symbol:SPO_3256 "ribosomal protein L3... 85 0.00072 1
UNIPROTKB|P66187 - symbol:rpmE "50S ribosomal protein L31... 84 0.00093 1
>TAIR|locus:2018442 [details] [associations]
symbol:emb2184 "embryo defective 2184" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009657 "plastid organization"
evidence=RCA] [GO:0009773 "photosynthetic electron transport in
photosystem I" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0015979 "photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249 PROSITE:PS01143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0006412
GO:GO:0009941 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
EMBL:AC023754 EMBL:AY059118 EMBL:AF370226 EMBL:AY087711
IPI:IPI00546700 PIR:A96784 RefSeq:NP_565109.1 UniGene:At.23653
ProteinModelPortal:Q9FWS4 SMR:Q9FWS4 STRING:Q9FWS4 PaxDb:Q9FWS4
PRIDE:Q9FWS4 ProMEX:Q9FWS4 EnsemblPlants:AT1G75350.1 GeneID:843871
KEGG:ath:AT1G75350 GeneFarm:60 TAIR:At1g75350 eggNOG:COG0254
HOGENOM:HOG000284895 InParanoid:Q9FWS4 OMA:FYLGNRS PhylomeDB:Q9FWS4
ProtClustDB:CLSN2722802 EvolutionaryTrace:Q9FWS4
Genevestigator:Q9FWS4 GermOnline:AT1G75350 TIGRFAMs:TIGR00105
Uniprot:Q9FWS4
Length = 144
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 88/132 (66%), Positives = 102/132 (77%)
Query: 1 MAQTLPNTFFQIKPSAPILPTRKVKNCAATGSGYRTRA-------VTCRKKDIHPQFYED 53
MA +LPN+F QI P P L RK A G R +TCRKK++HP+F+ED
Sbjct: 1 MAVSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHED 60
Query: 54 AKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKFRQKFGGLSEIM 113
AKVYCNGELVMTTGGT+KEYVVDVWSGNH FYLG RSA++VDADQVEKFR++F GLSEIM
Sbjct: 61 AKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIM 120
Query: 114 EIPVLKGEIVLP 125
EIPVLKGEI++P
Sbjct: 121 EIPVLKGEIIMP 132
>TIGR_CMR|CJE_0151 [details] [associations]
symbol:CJE_0151 "ribosomal protein L31" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197
PRINTS:PR01249 PROSITE:PS01143 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0254 HOGENOM:HOG000284895
TIGRFAMs:TIGR00105 KO:K02909 RefSeq:YP_178175.1
ProteinModelPortal:Q5HX10 STRING:Q5HX10 GeneID:3230914
KEGG:cjr:CJE0151 PATRIC:20042009 OMA:EGIHPKY ProtClustDB:PRK00019
BioCyc:CJEJ195099:GJC0-155-MONOMER Uniprot:Q5HX10
Length = 66
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDA-DQVEK 101
KK+IHP++ E KV C TT + E VD+ S H F+ G S +VDA +VEK
Sbjct: 2 KKEIHPEYVE-CKVSCACGNTFTTKSNKAELRVDICSNCHPFFTG--SEKIVDAAGRVEK 58
Query: 102 FRQKF 106
F++K+
Sbjct: 59 FKKKY 63
>TIGR_CMR|CHY_2565 [details] [associations]
symbol:CHY_2565 "ribosomal protein L31" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197
PRINTS:PR01249 PROSITE:PS01143 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0254 HOGENOM:HOG000284895
TIGRFAMs:TIGR00105 KO:K02909 OMA:EGIHPKY ProtClustDB:PRK00019
RefSeq:YP_361358.1 ProteinModelPortal:Q3A926 SMR:Q3A926
STRING:Q3A926 GeneID:3727858 KEGG:chy:CHY_2565 PATRIC:21278179
BioCyc:CHYD246194:GJCN-2564-MONOMER Uniprot:Q3A926
Length = 65
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 43 KKDIHPQFYEDAKVYCN-GELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEK 101
K IHP+ Y A+V C GE TG T+KE V++ S H FY G + V + E+
Sbjct: 2 KPGIHPE-YGKARVICACGE-TFETGSTKKEIRVEICSKCHPFYTGSQRTVEARG-RAEQ 58
Query: 102 FRQKFG 107
F++K+G
Sbjct: 59 FKKKYG 64
>TIGR_CMR|CBU_0905 [details] [associations]
symbol:CBU_0905 "ribosomal protein L31" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249
PROSITE:PS01143 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0254 HOGENOM:HOG000284895 TIGRFAMs:TIGR00105 KO:K02909
ProtClustDB:PRK00019 RefSeq:NP_819920.1 ProteinModelPortal:Q83D39
SMR:Q83D39 GeneID:1208798 KEGG:cbu:CBU_0905 PATRIC:17930511
OMA:DICNNCH BioCyc:CBUR227377:GJ7S-896-MONOMER Uniprot:Q83D39
Length = 79
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 43 KKDIHPQFYEDAKVYCN-GELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEK 101
K++IHP Y+ KV C+ G MT +E +++ S H FY G + +V A +VE+
Sbjct: 2 KENIHPP-YKQIKVTCSCGNTFMTGSTLDRELHLEICSACHPFYTG-QQKMVDTAGRVER 59
Query: 102 FRQKF 106
FR+K+
Sbjct: 60 FRKKY 64
>TIGR_CMR|DET_1327 [details] [associations]
symbol:DET_1327 "ribosomal protein L31" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249
PROSITE:PS01143 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
eggNOG:COG0254 HOGENOM:HOG000284895 TIGRFAMs:TIGR00105 KO:K02909
OMA:EGIHPKY ProtClustDB:PRK00019 RefSeq:YP_182038.1
ProteinModelPortal:Q3Z6W1 SMR:Q3Z6W1 STRING:Q3Z6W1 GeneID:3229418
KEGG:det:DET1327 PATRIC:21609683
BioCyc:DETH243164:GJNF-1328-MONOMER Uniprot:Q3Z6W1
Length = 68
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKF 102
K+ IHP++ V C T G T+ V++ + H FY G + +V A +VEKF
Sbjct: 2 KEKIHPKYNTATNVSCACGNTFTVGSTKDSIKVELCAQCHPFYTGEKR-MVDTAGRVEKF 60
Query: 103 RQKFG 107
RQ++G
Sbjct: 61 RQRYG 65
>TIGR_CMR|GSU_3107 [details] [associations]
symbol:GSU_3107 "ribosomal protein L31" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00501
InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249 PROSITE:PS01143
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0254 HOGENOM:HOG000284895 TIGRFAMs:TIGR00105 KO:K02909
OMA:EGIHPKY ProtClustDB:PRK00019 RefSeq:NP_954148.1
ProteinModelPortal:Q748A8 GeneID:2688448 KEGG:gsu:GSU3107
PATRIC:22029069 BioCyc:GSUL243231:GH27-3083-MONOMER Uniprot:Q748A8
Length = 65
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEKF 102
K+ IHP+ Y D V C T T+ E ++ S H F+ G + ++ A +VE+F
Sbjct: 2 KEGIHPK-YNDVMVKCACGNSFQTRSTKTEISTEICSACHPFFTG-KQKLIDTAGRVERF 59
Query: 103 RQKFG 107
R+K+G
Sbjct: 60 RKKYG 64
>TIGR_CMR|SO_4120 [details] [associations]
symbol:SO_4120 "ribosomal protein L31" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249
PROSITE:PS01143 GO:GO:0046872 GO:GO:0006412 GO:GO:0005840
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0254 HOGENOM:HOG000284895 TIGRFAMs:TIGR00105 KO:K02909
OMA:EGIHPKY ProtClustDB:PRK00019 RefSeq:NP_719649.1
ProteinModelPortal:Q8E9Z0 SMR:Q8E9Z0 GeneID:1171733
KEGG:son:SO_4120 PATRIC:23527882 Uniprot:Q8E9Z0
Length = 70
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 43 KKDIHPQFYE-DAKVYCNGELVMTTGGTQKEYVVDVWSGNHAFYLGGRSAVVVDADQVEK 101
K IHP++ E A C G ++ K+ +DV H FY G + VV +++K
Sbjct: 2 KPGIHPEYAEITANCTC-GNVIKVNSTVGKDLHLDVCGACHPFYTGTQK-VVDTGGRIDK 59
Query: 102 FRQKFGGLSE 111
F ++FG L +
Sbjct: 60 FNKRFGMLGK 69
>TIGR_CMR|SPO_3256 [details] [associations]
symbol:SPO_3256 "ribosomal protein L31" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_00501
InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249 PROSITE:PS01143
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0254 HOGENOM:HOG000284895
TIGRFAMs:TIGR00105 KO:K02909 RefSeq:YP_168459.1
ProteinModelPortal:Q5LNE9 GeneID:3193045 KEGG:sil:SPO3256
PATRIC:23379957 OMA:YTTRSTW ProtClustDB:PRK00528 Uniprot:Q5LNE9
Length = 73
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 21/71 (29%), Positives = 42/71 (59%)
Query: 43 KKDIHPQFYE-DAKVYCNGELVM--TTGGTQKEYV-VDVWSGNHAFYLGGRSAVVVDADQ 98
KKDIHP ++ D K+ +G ++ +T G + + + +++ +H + GG S ++ +
Sbjct: 2 KKDIHPDYHMIDVKL-TDGTVIQMKSTWGKEGDTLSLEIDPSSHPAWTGGSSRLMDTGGR 60
Query: 99 VEKFRQKFGGL 109
V KF++K+ GL
Sbjct: 61 VSKFKKKYEGL 71
>UNIPROTKB|P66187 [details] [associations]
symbol:rpmE "50S ribosomal protein L31" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00501 InterPro:IPR002150 Pfam:PF01197 PRINTS:PR01249
PROSITE:PS01143 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0006412 EMBL:BX842576 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0254 HOGENOM:HOG000284895
TIGRFAMs:TIGR00105 KO:K02909 OMA:EGIHPKY ProtClustDB:PRK00019
PIR:F70773 RefSeq:NP_215814.1 RefSeq:NP_335785.1
RefSeq:YP_006514675.1 ProteinModelPortal:P66187 SMR:P66187
PRIDE:P66187 EnsemblBacteria:EBMYCT00000000182
EnsemblBacteria:EBMYCT00000070982 GeneID:13319880 GeneID:886955
GeneID:924725 KEGG:mtc:MT1337 KEGG:mtu:Rv1298 KEGG:mtv:RVBD_1298
PATRIC:18124708 TubercuList:Rv1298 Uniprot:P66187
Length = 80
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 43 KKDIHPQFYEDAKVYCNGELVMTTGGTQK--EYVVDVWSGNHAFYLGGRSAVVVDADQVE 100
K DIHP YE+ V C T T+ VV+V S H FY G + ++ +V
Sbjct: 2 KSDIHPA-YEETTVVCGCGNTFQTRSTKPGGRIVVEVCSQCHPFYTG-KQKILDSGGRVA 59
Query: 101 KFRQKFG 107
+F +++G
Sbjct: 60 RFEKRYG 66
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 139 126 0.00091 102 3 11 22 0.38 31
29 0.40 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 587 (62 KB)
Total size of DFA: 132 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.16u 0.10s 12.26t Elapsed: 00:00:00
Total cpu time: 12.16u 0.10s 12.26t Elapsed: 00:00:01
Start: Sat May 11 07:05:35 2013 End: Sat May 11 07:05:36 2013