BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032499
MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI
VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS
GNCKLKYTYVHGGLTTFEQ

High Scoring Gene Products

Symbol, full name Information P value
AT5G42960 protein from Arabidopsis thaliana 4.9e-53
OEP24
Outer envelope pore protein 24, chloroplastic
protein from Pisum sativum 5.1e-51
AT1G45170 protein from Arabidopsis thaliana 2.2e-50

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032499
        (139 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2160051 - symbol:AT5G42960 "AT5G42960" species...   549  4.9e-53   1
UNIPROTKB|O49929 - symbol:OEP24 "Outer envelope pore prot...   530  5.1e-51   1
TAIR|locus:2028210 - symbol:AT1G45170 "AT1G45170" species...   524  2.2e-50   1


>TAIR|locus:2160051 [details] [associations]
            symbol:AT5G42960 "AT5G42960" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009941 "chloroplast
            envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536 "plastid"
            evidence=IDA] GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB008264 GO:GO:0015288 GO:GO:0046930 GO:GO:0022843
            GO:GO:0031359 GO:GO:0034426 eggNOG:NOG331228 HOGENOM:HOG000015146
            ProtClustDB:CLSN2689917 EMBL:AY054647 EMBL:BT001163 EMBL:DQ487722
            EMBL:DQ653343 IPI:IPI00532309 RefSeq:NP_568618.1 UniGene:At.55328
            UniGene:At.6529 PRIDE:Q8H0Y1 DNASU:834310 EnsemblPlants:AT5G42960.1
            GeneID:834310 KEGG:ath:AT5G42960 TAIR:At5g42960 InParanoid:Q8H0Y1
            OMA:RFQFMNS PhylomeDB:Q8H0Y1 Genevestigator:Q8H0Y1 Uniprot:Q8H0Y1
        Length = 213

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 100/138 (72%), Positives = 123/138 (89%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS+KG+Y+TDK  G+ +  +AFNAGD+KLRA++TDAT+V GP+L GLALAVEKPG FI
Sbjct:     3 MKASIKGKYDTDKTSGIGS--LAFNAGDIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             V+YNVPKKD RFQFMN+VR+A+KPLNLTYIH R DNRTI++G+LV DSANK+SANH++G+
Sbjct:    61 VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query:   121 GNCKLKYTYVHGGLTTFE 138
              NCK+KYTY HGGL TFE
Sbjct:   121 NNCKIKYTYAHGGLATFE 138


>UNIPROTKB|O49929 [details] [associations]
            symbol:OEP24 "Outer envelope pore protein 24,
            chloroplastic" species:3888 "Pisum sativum" [GO:0015288 "porin
            activity" evidence=IDA] [GO:0022843 "voltage-gated cation channel
            activity" evidence=IDA] [GO:0031359 "integral to chloroplast outer
            membrane" evidence=IDA] [GO:0034426 "etioplast membrane"
            evidence=IDA] [GO:0034765 "regulation of ion transmembrane
            transport" evidence=IDA] [GO:0046930 "pore complex" evidence=IDA]
            GO:GO:0015288 GO:GO:0046930 GO:GO:0022843 GO:GO:0031359
            GO:GO:0034426 EMBL:AJ001009 PIR:T06474 TCDB:1.B.28.1.1
            Uniprot:O49929
        Length = 213

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 103/138 (74%), Positives = 117/138 (84%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKA+LKG+Y+ D +    AATVAFNAGDVKLRAS+TDAT  N PSL GL LAVEKPG F 
Sbjct:     1 MKAALKGKYDLDHNSS-GAATVAFNAGDVKLRASITDATFKNSPSLTGLVLAVEKPGSFS 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             VDYNVPKKDFRFQFMN+VRVA+KPLNL YIH +GDNRTIL+GTLV+D +NKVSAN+ + S
Sbjct:    60 VDYNVPKKDFRFQFMNTVRVAEKPLNLAYIHSKGDNRTILDGTLVWDPSNKVSANYAVES 119

Query:   121 GNCKLKYTYVHGGLTTFE 138
             GNCKLKY+Y H GLTT E
Sbjct:   120 GNCKLKYSYNHKGLTTIE 137


>TAIR|locus:2028210 [details] [associations]
            symbol:AT1G45170 "AT1G45170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0045036 "protein targeting to
            chloroplast" evidence=RCA] [GO:0009536 "plastid" evidence=IDA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0015288 GO:GO:0046930
            EMBL:AC007915 GO:GO:0022843 GO:GO:0031359 GO:GO:0034426
            EMBL:BT025535 EMBL:AK118473 IPI:IPI00540316 IPI:IPI00846637
            PIR:A96510 RefSeq:NP_001077680.1 RefSeq:NP_175131.3
            UniGene:At.38727 IntAct:Q1H5C9 STRING:Q1H5C9 PRIDE:Q1H5C9
            DNASU:841085 EnsemblPlants:AT1G45170.1 GeneID:841085
            KEGG:ath:AT1G45170 TAIR:At1g45170 eggNOG:NOG331228
            HOGENOM:HOG000015146 InParanoid:Q1H5C9 OMA:SANYMVG PhylomeDB:Q1H5C9
            ProtClustDB:CLSN2689917 Genevestigator:Q1H5C9 Uniprot:Q1H5C9
        Length = 213

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 96/138 (69%), Positives = 119/138 (86%)

Query:     1 MKASLKGRYETDKDRGVAAATVAFNAGDVKLRASLTDATVVNGPSLNGLALAVEKPGFFI 60
             MKAS KG+++ DK   VA+ T  FNAG+ KLRA++TDA+ V GPS NGL+LAVEKPGFFI
Sbjct:     2 MKASFKGKFDVDKSGSVASLT--FNAGNAKLRATMTDASFVAGPSFNGLSLAVEKPGFFI 59

Query:    61 VDYNVPKKDFRFQFMNSVRVADKPLNLTYIHGRGDNRTILEGTLVFDSANKVSANHVLGS 120
             +DYNVPKKD RFQFMN++R+A+KPLNLTYIH RGDNRTI++G+ V D ANK+SAN+++G+
Sbjct:    60 IDYNVPKKDVRFQFMNTIRIAEKPLNLTYIHMRGDNRTIVDGSFVIDPANKLSANYMVGT 119

Query:   121 GNCKLKYTYVHGGLTTFE 138
              NCKLKYTYVHGG+ TFE
Sbjct:   120 KNCKLKYTYVHGGIATFE 137


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      139       139   0.00091  102 3  11 22  0.44    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  114 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.05u 0.15s 12.20t   Elapsed:  00:00:00
  Total cpu time:  12.05u 0.15s 12.20t   Elapsed:  00:00:00
  Start:  Sat May 11 07:20:52 2013   End:  Sat May 11 07:20:52 2013

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