BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032500
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486
PE=2 SV=1
Length = 224
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 16/115 (13%)
Query: 1 MGPAEVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCN 60
M ++ R+ ME L+ +Y G+ Y+LI KNCNHF + C++LTG PIP W+NRLAR+G FCN
Sbjct: 97 MSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCN 156
Query: 61 CVLPATLNSTRVRH--HRIEGKADEGEKKKLTSESNRFTSSNSSSSSSSSPSGTQ 113
C+LP ++ T V R+E +DE E SNS +SS S G++
Sbjct: 157 CLLPESIQLTAVSALPERLE-FSDEDE-------------SNSEASSVSDEEGSE 197
>sp|Q5PQ09|DESI2_XENLA Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1
Length = 192
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP WVNRLA +F CV
Sbjct: 83 DIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA---YFSTCV 137
>sp|Q5XIT6|DESI2_RAT Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2
SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP W+NRLA +F +C+
Sbjct: 84 DIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138
>sp|Q8X1T0|HAG1_SCHPO DeSI-like protein hag1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hag1 PE=1 SV=1
Length = 201
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 41/53 (77%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGF 57
+V ++ L++E+ G +Y+L+ +NCNHF N A I LTG+PIPS++NR++RIG
Sbjct: 81 DVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTGSPIPSFLNRISRIGL 133
>sp|Q9D291|DESI2_MOUSE Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=2 SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP W+NRLA +F +C+
Sbjct: 84 DIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138
>sp|Q5R456|DESI2_PONAB Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP W+NRLA +F +C+
Sbjct: 84 DIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138
>sp|Q9BSY9|DESI2_HUMAN Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP W+NRLA +F +C+
Sbjct: 84 DIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138
>sp|A3QRX8|DESI2_PIG Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1
Length = 194
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +EYKGNAY+L+ KNCNHF + L G IP W+NRLA +F +C+
Sbjct: 84 DIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLA---YFSSCI 138
>sp|Q6DC39|DESI2_DANRE Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1
Length = 196
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
+V ++E++ +EYKGNAY+L+ KNCNHF + L G IP WVNRLA +F +CV
Sbjct: 83 DVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPRWVNRLA---YFSSCV 137
>sp|Q5ZIV7|DESI2_CHICK Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1
Length = 193
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 5 EVRTVMEDLAEEYKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRLARIGFFCNCV 62
++ ++E+L +E+KGNAY+L+ KNCNHF + L G IP WVNRLA +F +C+
Sbjct: 83 DIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLA---YFSSCI 137
>sp|Q6ICB0|DESI1_HUMAN Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1
Length = 168
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 17 YKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRL 52
++G AYNL NCN F N+ LTG IPS++ L
Sbjct: 96 FRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q4KM30|DESI1_RAT Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2
SV=1
Length = 168
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 17 YKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRL 52
++G AYNL NCN F N+ LTG IPS++ L
Sbjct: 96 FRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q9CQT7|DESI1_MOUSE Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1
Length = 168
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 17 YKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRL 52
++G AYNL NCN F N+ LTG IPS++ L
Sbjct: 96 FRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q6GLM5|DESI1_XENLA Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1
Length = 169
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 17 YKGNAYNLITKNCNHFCNDACIRLTGNPIPSWVNRL 52
+ G +Y+L NCN F N+ LTG IPS++ L
Sbjct: 97 FSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITEL 132
>sp|O13356|CHS1_CRYNH Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A
(strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)
GN=CHS1 PE=3 SV=2
Length = 1236
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 96 FTSSN---SSSSSSSSPSGTQTRGRSRTRSRRALAPASPLILGPSSS 139
FTSS S ++S P GT R ++ TR R +APA PL+ P+ S
Sbjct: 11 FTSSRPLPSRQPTTSRPGGTLKRNKTLTRPERHVAPA-PLVAPPTQS 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,080,596
Number of Sequences: 539616
Number of extensions: 1906936
Number of successful extensions: 18726
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 13582
Number of HSP's gapped (non-prelim): 3334
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)