BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032508
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica
GN=OsI_027940 PE=1 SV=2
Length = 210
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 97/132 (73%), Gaps = 6/132 (4%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 115
Query: 121 PADMDFGDLDFS 132
AD++ +DFS
Sbjct: 116 -ADVNVDGMDFS 126
>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp.
japonica GN=Os08g0359500 PE=2 SV=1
Length = 213
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 97/132 (73%), Gaps = 6/132 (4%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 115
Query: 121 PADMDFGDLDFS 132
AD++ +DFS
Sbjct: 116 -ADVNVDGMDFS 126
>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
GN=At3g03773 PE=1 SV=1
Length = 150
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSR+P V WAQR+D+VY+T+ LPDA+D+ +K EP+G F FSA G +E ++LY K
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGK 59
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 114
+ + E + +VGLRNI + ++K E WW+RLLK KP ++KVDW+KW DEDEE
Sbjct: 60 I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112
>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=wos2 PE=2 SV=1
Length = 186
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 23/156 (14%)
Query: 2 SRHPTVKWAQRTDR-------VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVD 54
++ P V WAQR+++ +Y+T+ +PDA D K+ L PE K + SG + Y V
Sbjct: 5 TQIPEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPE-KLVIDSKSGANA-HYAVQ 62
Query: 55 IDLYDKVDVNESKASVGLRNIHYLVKKAE--NKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
ID + +DV +SK SV R I +++ K E ++W RL K+ + +L+ D+D+W+DED
Sbjct: 63 IDFFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRLH-WLRTDFDRWVDED 121
Query: 113 EE---------GKDDKP--PADMDFGDLDFSVSANV 137
E+ G P A G +DFS N+
Sbjct: 122 EQEAQPEVSPFGAGGMPDLSALGGMGGMDFSQFGNL 157
>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans
GN=ZC395.10 PE=3 SV=1
Length = 175
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
M++ PTV WAQR VY+TI++ +A+ +LK E K F +S DK YE ++ +D+
Sbjct: 1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEG-NKLHFQGSSKTDK--YEATLEFFDE 57
Query: 61 VDVNESK-ASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKW 108
+D K R + V+K WW RLL+ GK +LKVD+ KW
Sbjct: 58 IDPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGKVH-WLKVDFGKW 105
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP-DKIPYEVDIDLYDKVDV 63
P V WAQR +Y+ +++ DAQD+ + +E F G + YE ++ V
Sbjct: 6 PHVYWAQRHGEIYLRVEISDAQDLSIGVEENILQFRGQGHGAKGENEYEFSLEFLKPVK- 64
Query: 64 NESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E K R ++ V+K E WW+RL KQ K P+FL D+D+W+DE
Sbjct: 65 PEVKHKSTQRQVNITVRKQEEVWWNRLTKQE-KKPLFLAPDFDRWLDES 112
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHHELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K E++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKESQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|P83868|TEBP_RAT Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1 SV=2
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q5NVM4|TEBP_PONAB Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q9R0Q7|TEBP_MOUSE Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q6PWL5|TEBP_MACFA Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1
SV=1
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q3ZBF7|TEBP_BOVIN Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYD 59
S P V WAQR +Y+ ++L D ++ + + F + G D I YE I+ +
Sbjct: 5 SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGHGAKGDNI-YEFQIEFLE 63
Query: 60 KVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDE 113
V+ + V R ++ V+K E+ WW RL KQ K P+FL D+D+W+DE +
Sbjct: 64 PVE-PKPVCRVTQRQLNITVQKKESSWWERLTKQE-KRPLFLAPDFDRWLDESD 115
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITDNVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K + WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPAYRLTQRQVNITVQKKGSHWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SBA1 PE=1 SV=3
Length = 216
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 20/145 (13%)
Query: 4 HPTVKWAQRT-------DRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP-----DKIPY 51
+P V WAQR+ + V IT+ + D +L ++P A S P + Y
Sbjct: 7 NPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKP-SYIELKAQSKPHVGDENVHHY 65
Query: 52 EVDIDLYDKVDVNESKASVGLRNIHYLVK----KAENKWWSRLLKQAGKPPVFLKVDWDK 107
++ IDLY ++ ++ V HY +K E+++W RL K+ K P ++K D+DK
Sbjct: 66 QLHIDLYKEIIPEKTMHKVA-NGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDK 123
Query: 108 WIDEDEEGKDDKPPADMDFGDLDFS 132
W+DEDE+ + + D G +DFS
Sbjct: 124 WVDEDEQDEVEAEGNDAAQG-MDFS 147
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDK--IPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + E F A K YE ++ D V
Sbjct: 10 PHVYWAQRHRELYLRVELSDVQNPAIS-TTENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 68
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 69 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 116
>sp|Q90955|TEBP_CHICK Prostaglandin E synthase 3 (Fragment) OS=Gallus gallus GN=PTGES3
PE=1 SV=1
Length = 146
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 16 VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNI 75
V+I + D++DV + E + K FS G D + +IDL++ +D NESK R+I
Sbjct: 1 VFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSI 59
Query: 76 HYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123
++K E+ + W RL K+ K +L VD++ W D +++ +D D
Sbjct: 60 LCCLRKGESGQAWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 107
>sp|Q9VH95|YC17_DROME Uncharacterized protein CG16817 OS=Drosophila melanogaster
GN=CG16817 PE=1 SV=1
Length = 184
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPD-KIPYEVDIDLYDKVDV 63
P V WAQR D +Y+ ID+ + +D++ K+ E F F + D YEV ++ +VD
Sbjct: 10 PPVSWAQRNDLIYVIIDV-ECKDIEHKVT-EKTFTFKGVNVLDPSKKYEVTLNFLHEVDP 67
Query: 64 NESKASVGLRNIHYLV-KKAENKWWSRLLKQAGKPPVFLKVDWDKWIDE--DEEG 115
+ + R + + + KKA +WS L K FLK ++ KW DE DEEG
Sbjct: 68 EKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKLH-FLKANFAKWRDESDDEEG 121
>sp|Q9D9A7|PTG3L_MOUSE Putative protein PTGES3L OS=Mus musculus GN=Ptges3l PE=2 SV=1
Length = 131
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 1 MSRHPT-VKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYD 59
M R P W R V++ + D+ DV + +E + + FS +G D + +I+ Y
Sbjct: 1 MERQPARTLWYDRPKYVFMEFCVEDSTDVSVLIE-DHRVVFSCRNG-DGVELYNEIEFYA 58
Query: 60 KVDVNESKASVGLRNIHYLVKKAENK-WWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDD 118
KV+ +S+ R+I V+K + K W RL K+ KP V+L VD+D W D EG D+
Sbjct: 59 KVNSKDSQDKRSGRSITCFVRKWKEKVAWPRLTKEDIKP-VWLSVDFDNW--RDWEGDDE 115
Query: 119 KPPADMD 125
A ++
Sbjct: 116 VELAQVE 122
>sp|Q9CWU0|TDR12_MOUSE Tudor domain-containing protein 12 OS=Mus musculus GN=Tdrd12 PE=2
SV=2
Length = 1215
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKV 61
S HP +KW Q+ D V + I + + +D K K + + FSA G DK Y D++L +
Sbjct: 1073 SFHPQIKWFQKDDVVILKIKIRNVKDYKCKFFTD-RVIFSAWVG-DKF-YLADLELQGDI 1129
Query: 62 DVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
++ K + + K + + W LLKQ F D+D W EE ++D P
Sbjct: 1130 RKDDCKCIIKDDEPLITLAKEKQECWCGLLKQRNPNVAF---DFDHW----EECEEDSP 1181
>sp|Q2RT47|LEXA_RHORT LexA repressor OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB
8255) GN=lexA PE=3 SV=1
Length = 251
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 NESKASVGLRN---IHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
+E K ++GL++ IH L+K E + + + L + L++ + D D E DD
Sbjct: 27 DEMKDALGLKSKSGIHRLIKGLEERGFLKRLPHRARALEVLRLPCNLTFDGDGEALDDGQ 86
Query: 121 PADMDFGDL 129
PA + G L
Sbjct: 87 PAPLFGGPL 95
>sp|P32592|ITB2_BOVIN Integrin beta-2 OS=Bos taurus GN=ITGB2 PE=1 SV=1
Length = 769
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 55 IDLYDKVDVNESKASVG-----LRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWI 109
+ Y+K+ K++VG RN+ L+K A NK SR+ P LKV +D +
Sbjct: 327 VKTYEKLTEIIPKSAVGELSEDSRNVVELIKNAYNKLSSRVFLDHSTLPDTLKVTYDSFC 386
Query: 110 DEDEEGKDDKPPADMDFGDLDFSVSANV 137
+ + + D+P D D ++ ++ V
Sbjct: 387 -SNGKSQVDQPRGDCDGVQINVPITFQV 413
>sp|P15076|VG02_BPT4 Terminal DNA protecting protein OS=Enterobacteria phage T4 GN=2
PE=4 SV=2
Length = 274
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 47 DKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVF-----L 101
+ +PY L + + + GL N+HY+ KA ++ LLKQ P L
Sbjct: 152 ETLPYWDKFPLIIYLGLGKHNLMYGL-NLHYIPPKARQQFLEELLKQYANTPTITNKTKL 210
Query: 102 KVDWDK 107
K+DW +
Sbjct: 211 KIDWSQ 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,286,269
Number of Sequences: 539616
Number of extensions: 2443627
Number of successful extensions: 4334
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 4288
Number of HSP's gapped (non-prelim): 45
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)