Query 032508
Match_columns 139
No_of_seqs 137 out of 853
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 00:45:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kmw_A Uncharacterized protein 100.0 1.5E-36 5.1E-41 220.6 12.5 116 1-120 1-118 (150)
2 1ejf_A Progesterone receptor P 100.0 4.6E-36 1.6E-40 211.8 12.0 117 5-123 4-121 (125)
3 2cg9_X CO-chaperone protein SB 100.0 7.5E-35 2.5E-39 208.0 7.0 115 1-117 3-132 (134)
4 2xcm_C SGT1-like protein, cyto 99.9 2.9E-24 9.8E-29 142.8 10.0 88 4-93 2-91 (92)
5 1rl1_A Suppressor of G2 allele 99.9 8.4E-24 2.9E-28 146.1 10.7 96 1-98 4-103 (114)
6 2o30_A Nuclear movement protei 99.9 1E-23 3.5E-28 149.5 9.9 99 1-106 1-102 (131)
7 1x5m_A Calcyclin-binding prote 99.9 6.7E-23 2.3E-27 144.5 11.1 91 4-96 20-117 (127)
8 1wgv_A KIAA1068 protein; CS do 99.9 1.1E-22 3.8E-27 142.9 12.0 94 3-98 18-116 (124)
9 1wfi_A Nuclear distribution ge 99.9 9.7E-23 3.3E-27 144.3 10.0 106 3-114 6-119 (131)
10 1wh0_A Ubiquitin carboxyl-term 99.9 2.8E-22 9.5E-27 142.9 10.9 90 4-94 19-122 (134)
11 3qor_A Nuclear migration prote 99.9 2.3E-21 7.7E-26 135.8 10.5 97 3-105 15-118 (121)
12 2rh0_A NUDC domain-containing 99.8 3E-20 1E-24 135.5 10.4 90 3-98 12-108 (157)
13 2k8q_A Protein SHQ1; beta-sand 98.6 8.6E-08 3E-12 67.7 7.3 82 3-91 2-91 (134)
14 3eud_A Protein SHQ1; CS domain 98.6 9.3E-07 3.2E-11 60.7 11.7 83 2-91 15-105 (115)
15 3gla_A Low molecular weight he 98.5 5.1E-06 1.8E-10 55.1 11.9 81 3-84 3-99 (100)
16 4fei_A Heat shock protein-rela 98.4 9.5E-06 3.3E-10 54.2 12.5 81 3-84 5-96 (102)
17 3aab_A Putative uncharacterize 98.1 5.4E-05 1.8E-09 52.0 11.2 81 4-85 24-118 (123)
18 4eld_A MJ16.5-P1, small heat s 98.0 0.00012 4.1E-09 52.6 12.1 79 6-85 58-153 (161)
19 1gme_A Heat shock protein 16.9 98.0 0.00014 4.8E-09 51.8 11.1 82 4-85 43-140 (151)
20 2wj5_A Heat shock protein beta 97.6 0.00042 1.4E-08 46.1 8.3 79 6-85 3-91 (101)
21 3l1e_A Alpha-crystallin A chai 97.5 0.0025 8.7E-08 42.6 11.5 79 5-84 3-91 (106)
22 3q9p_A Heat shock protein beta 97.4 0.0026 9E-08 40.8 10.0 73 10-83 3-85 (85)
23 2y1y_A Alpha-crystallin B chai 97.2 0.004 1.4E-07 40.3 9.1 73 11-84 3-85 (90)
24 2bol_A TSP36, small heat shock 96.9 0.006 2.1E-07 48.4 9.7 81 4-85 98-191 (314)
25 2klr_A Alpha-crystallin B chai 96.9 0.0054 1.8E-07 44.7 8.1 77 7-84 66-152 (175)
26 2bol_A TSP36, small heat shock 93.1 0.64 2.2E-05 36.7 9.2 70 12-82 231-313 (314)
27 4eld_A MJ16.5-P1, small heat s 21.2 1.7E+02 0.0059 19.8 5.0 36 47-83 64-99 (161)
No 1
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-36 Score=220.57 Aligned_cols=116 Identities=47% Similarity=0.914 Sum_probs=106.4
Q ss_pred CCCCCCeEEEecCCeEEEEEEcCCCCcccEEEe-cCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCeEEEEE
Q 032508 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLE-PEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLV 79 (139)
Q Consensus 1 m~~~P~~~W~Qt~~~V~ItI~l~~~~~~~V~~~-~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~kvei~L 79 (139)
|+++|+|.||||.+.|+|+|+++++++++|+|+ ++ +|+|++. +.+++.|.++++||++|+|+ |+|++.+++|+|+|
T Consensus 1 m~~~P~~~W~Qt~~~V~ltI~l~~~~~v~V~~~~~~-~l~~~~~-~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~L 77 (150)
T 2kmw_A 1 SSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQG-LFSFSAL-GAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFSI 77 (150)
T ss_dssp CEECCCEEEEECSSEEEEEECCSSEEEEEECCCTTE-EEEEEEE-TTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEEE
T ss_pred CCcCCcEEEEeCCCEEEEEEEeCCCCceEEEEecCC-EEEEEEE-cCCCceEEEEeEhhhccccc-ceEEecCCEEEEEE
Confidence 899999999999999999999999999999998 66 9999998 35667899999999999999 99999999999999
Q ss_pred EecCCcccccccccccc-CCCceeecCcccccCcccCCCCCC
Q 032508 80 KKAENKWWSRLLKQAGK-PPVFLKVDWDKWIDEDEEGKDDKP 120 (139)
Q Consensus 80 ~K~~~~~W~~L~~~~~k-~~~~~~~Dwd~~~de~d~e~~~~~ 120 (139)
+|+++++|+||++++.| ++ |+++||+||+||+++++++.+
T Consensus 78 ~K~e~~~W~rL~k~~~K~~~-~lk~Dwdkw~dedeeee~~~~ 118 (150)
T 2kmw_A 78 QKEERSWWTRLLKSEEKPAP-YIKVDWNKWCDEDEEVNSETA 118 (150)
T ss_dssp EECCSSCCSCSBSCCSSCCT-TEEECSSSSCCSSCCCCSSCC
T ss_pred EECCCCcCcccccCCcccCc-cccccchhcCCchhccccccc
Confidence 99999999999999888 55 999999999999887775433
No 2
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=100.00 E-value=4.6e-36 Score=211.76 Aligned_cols=117 Identities=32% Similarity=0.568 Sum_probs=99.3
Q ss_pred CCeEEEecCCeEEEEEEcCCCCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCeEEEEEEecCC
Q 032508 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAEN 84 (139)
Q Consensus 5 P~~~W~Qt~~~V~ItI~l~~~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~kvei~L~K~~~ 84 (139)
|+|.||||.+.|+|+|+++++++++|+|+++ +|+|++.++.+++.|.++++||++|+|++|+|++.+++|+|+|+|+++
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDSKDVNVNFEKS-KLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRKGES 82 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTEEEEEEEEETT-EEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEESST
T ss_pred CceeEEeCCCEEEEEEEecCCCceEEEEECC-EEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEECCC
Confidence 4999999999999999999999999999997 999999875566789999999999999999999999999999999987
Q ss_pred c-cccccccccccCCCceeecCcccccCcccCCCCCCCCC
Q 032508 85 K-WWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPPAD 123 (139)
Q Consensus 85 ~-~W~~L~~~~~k~~~~~~~Dwd~~~de~d~e~~~~~~~~ 123 (139)
+ +|+||++++.|++ |+++||+||.||+|++|++.++++
T Consensus 83 ~~~W~rL~~~~~K~~-~lk~D~dkw~de~dd~~~~~~~~~ 121 (125)
T 1ejf_A 83 GQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD 121 (125)
T ss_dssp TCCCSSSBSSCCCCT-TEEECTTTCCCCC-----------
T ss_pred CCCCCceecCCCccc-cccCChHHhCCccccccccccccc
Confidence 5 9999999988876 999999999998777665555554
No 3
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-35 Score=207.99 Aligned_cols=115 Identities=31% Similarity=0.588 Sum_probs=95.9
Q ss_pred CCCCCCeEEEecCCe-------EEEEEEcCCCCcccEEEecCcEEEEEEEeCC-----CCCcEEEEEecccccccCCceE
Q 032508 1 MSRHPTVKWAQRTDR-------VYITIDLPDAQDVKLKLEPEGKFFFSATSGP-----DKIPYEVDIDLYDKVDVNESKA 68 (139)
Q Consensus 1 m~~~P~~~W~Qt~~~-------V~ItI~l~~~~~~~V~~~~~~~l~~~~~~~~-----~~~~y~~~l~L~~~I~pe~s~~ 68 (139)
|+++|+|.||||.+. |+|+|+++++++++|+|+++ +|+|++.++. +++.|.++++||++|+|++|+|
T Consensus 3 ~~~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~~~~V~~~~~-~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~ 81 (134)
T 2cg9_X 3 KVINPQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPS-YIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH 81 (134)
T ss_dssp --------CBCCCEEECCCSSEEEEECCCSSEESCCCCBCSS-EEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred cccCCCEEEEeCCCCcCCcCCEEEEEEEecCCCceEEEEECC-EEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence 578999999999988 99999999999999999997 9999988632 1468999999999999999999
Q ss_pred EecCCe-EEEEEEecCC--ccccccccccccCCCceeecCcccccCcccCCC
Q 032508 69 SVGLRN-IHYLVKKAEN--KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKD 117 (139)
Q Consensus 69 ~i~~~k-vei~L~K~~~--~~W~~L~~~~~k~~~~~~~Dwd~~~de~d~e~~ 117 (139)
++.+++ |+|+|+|+++ .+||||++++.|+| |+++||+||+||+|+|++
T Consensus 82 ~v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~-~lk~D~dkw~dEde~e~~ 132 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKWVDADEQDEV 132 (134)
T ss_dssp EECCC--CEEEEEECSSSSCCCSCSSSSCCCCS-SEEECTTTCCCSSSSSCC
T ss_pred EECCCEEEEEEEEECCCCCCCCCceecCCCccC-cccCCchhcCCccccccc
Confidence 999999 9999999994 59999999998977 999999999999987664
No 4
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.91 E-value=2.9e-24 Score=142.83 Aligned_cols=88 Identities=18% Similarity=0.236 Sum_probs=80.8
Q ss_pred CCCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCeEEEEEEe
Q 032508 4 HPTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKK 81 (139)
Q Consensus 4 ~P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~kvei~L~K 81 (139)
.|+|+|+||.+.|+|+|+++++ +++.|+|+++ +|+|++.+ .+++.|.++++||++|+|++|+|++.+++|+|+|+|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~-~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K 79 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEV-PGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAK 79 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECC-TTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEB
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEc-CCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEc
Confidence 5899999999999999999985 6889999987 99999875 356789999999999999999999999999999999
Q ss_pred cCCccccccccc
Q 032508 82 AENKWWSRLLKQ 93 (139)
Q Consensus 82 ~~~~~W~~L~~~ 93 (139)
+++++|++|+++
T Consensus 80 ~~~~~W~~L~~~ 91 (92)
T 2xcm_C 80 ADIITWASLEHG 91 (92)
T ss_dssp SSSCCCSCSBTT
T ss_pred CCCCcchhcccC
Confidence 999999999865
No 5
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.90 E-value=8.4e-24 Score=146.08 Aligned_cols=96 Identities=22% Similarity=0.355 Sum_probs=81.2
Q ss_pred CCCC--CCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCeEE
Q 032508 1 MSRH--PTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNIH 76 (139)
Q Consensus 1 m~~~--P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~kve 76 (139)
|+++ |+|+|+||.+.|+|+|+++++ ++++|+|+++ +|+|++.. .+++.|.++++||++|+|++|+|++.+++|+
T Consensus 4 m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~-~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~ 81 (114)
T 1rl1_A 4 MTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKL-PSGEDYNLKLELLHPIIPEQSTFKVLSTKIE 81 (114)
T ss_dssp ----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEEC-TTSSEEEEEECBSSCCCGGGEEEEECSSSEE
T ss_pred CCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEe-CCCcEEEEEeeCCCcCCccccEEEEECCEEE
Confidence 6654 569999999999999999987 4889999887 99999875 3467899999999999999999999999999
Q ss_pred EEEEecCCccccccccccccCC
Q 032508 77 YLVKKAENKWWSRLLKQAGKPP 98 (139)
Q Consensus 77 i~L~K~~~~~W~~L~~~~~k~~ 98 (139)
|+|+|+++++|++|++++.++.
T Consensus 82 i~L~K~~~~~W~~L~~~~~~~~ 103 (114)
T 1rl1_A 82 IKLKKPEAVRWEKLEGQGDVPT 103 (114)
T ss_dssp EEEECSSCCCCSSSBTTC----
T ss_pred EEEEcCCCCcCccccccCCccC
Confidence 9999999999999999887754
No 6
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.90 E-value=1e-23 Score=149.49 Aligned_cols=99 Identities=20% Similarity=0.337 Sum_probs=75.1
Q ss_pred CCCCCCeEEEecCCeEEEEEEcC---CCCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCeEEE
Q 032508 1 MSRHPTVKWAQRTDRVYITIDLP---DAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHY 77 (139)
Q Consensus 1 m~~~P~~~W~Qt~~~V~ItI~l~---~~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~kvei 77 (139)
|+.+|+|.|+||.+.|+|+|+++ .++++.|+|+++ +|+|++++ .+ .++++||++|+|++|+|++.+++|+|
T Consensus 1 m~~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~g----~~-~~~~~L~~~I~~e~S~w~i~~~kv~i 74 (131)
T 2o30_A 1 MPSEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQG----EI-VIDGELLHEVDVSSLWWVINGDVVDV 74 (131)
T ss_dssp ----CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEETT----EE-EEEEEBSSCEEEEEEEEEEETTEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEECC----Ee-eEccccccccccccCEEEEeCCEEEE
Confidence 88999999999999999999997 358999999997 99999753 34 78999999999999999999999999
Q ss_pred EEEecCCccccccccccccCCCceeecCc
Q 032508 78 LVKKAENKWWSRLLKQAGKPPVFLKVDWD 106 (139)
Q Consensus 78 ~L~K~~~~~W~~L~~~~~k~~~~~~~Dwd 106 (139)
+|+|+...+|++|+++++++. ..+++-+
T Consensus 75 ~L~K~~~~~W~~L~~~~~~id-~~k~~~e 102 (131)
T 2o30_A 75 NVTKKRNEWWDSLLVGSESVD-VQKLAEN 102 (131)
T ss_dssp EEEESSCCCCSCSBC--------------
T ss_pred EEEECCCCCCccccCCCCCCC-HhHcCcc
Confidence 999996669999999887654 4445544
No 7
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=6.7e-23 Score=144.54 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=81.9
Q ss_pred CCCeEEEecCCeEEEEEEcCCC-----CcccEEEecCcEEEEEEEeCCCCCcEEEEEe-cccccccCCceEEecCCeEEE
Q 032508 4 HPTVKWAQRTDRVYITIDLPDA-----QDVKLKLEPEGKFFFSATSGPDKIPYEVDID-LYDKVDVNESKASVGLRNIHY 77 (139)
Q Consensus 4 ~P~~~W~Qt~~~V~ItI~l~~~-----~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~-L~~~I~pe~s~~~i~~~kvei 77 (139)
.++|.|+||.+.|+|+|+++++ +++.|+|+++ +|.|++.+ .++..|.++++ ||++|+|++|+|++.+++|+|
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~-~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei 97 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKN-LNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLI 97 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECS-CSSSCEEEEEECBSSCCCTTTCEEEEETTEEEE
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEc-CCCCcEEEEhHHhcCccCcccCEEEEeCCEEEE
Confidence 4689999999999999999987 6889999997 99999875 35678999996 999999999999999999999
Q ss_pred EEEecCCc-ccccccccccc
Q 032508 78 LVKKAENK-WWSRLLKQAGK 96 (139)
Q Consensus 78 ~L~K~~~~-~W~~L~~~~~k 96 (139)
+|+|++++ +|++|++.+.+
T Consensus 98 ~L~K~~~~~~W~~L~~~~~k 117 (127)
T 1x5m_A 98 LCRKKVENTRWDYLTQVEKE 117 (127)
T ss_dssp EEECSSSSCCCSSSBHHHHH
T ss_pred EEEECCCCCCCCcccccccc
Confidence 99999987 99999976543
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.89 E-value=1.1e-22 Score=142.89 Aligned_cols=94 Identities=14% Similarity=0.255 Sum_probs=82.8
Q ss_pred CCCCeEEEecCCeEEEEEEcC----CCCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCe-EEE
Q 032508 3 RHPTVKWAQRTDRVYITIDLP----DAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRN-IHY 77 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~----~~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~k-vei 77 (139)
.+|+|.|+||.+.|+|+|.++ .+++++|+|+++ +|+|++.+ ..+.+|.++++||++|+|++|+|++.+++ |+|
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~-~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i 95 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLE-ENGERVLMEGKLTHKINTESSLWSLEPGKCVLV 95 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEEC-SSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEc-cCCCceEEcccccCcCCCcCCEEEEeCCCEEEE
Confidence 468999999999999999999 457999999997 99999874 23456789999999999999999999877 999
Q ss_pred EEEecCCccccccccccccCC
Q 032508 78 LVKKAENKWWSRLLKQAGKPP 98 (139)
Q Consensus 78 ~L~K~~~~~W~~L~~~~~k~~ 98 (139)
+|+|++.++|++|++++.++.
T Consensus 96 ~L~K~~~~~W~~L~~~~~~id 116 (124)
T 1wgv_A 96 NLSKVGEYWWNAILEGEEPID 116 (124)
T ss_dssp EECBSSSCCCSCSBTTSCCCS
T ss_pred EEEECCCCCCcCcccCCCccC
Confidence 999998889999998876653
No 9
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.88 E-value=9.7e-23 Score=144.35 Aligned_cols=106 Identities=19% Similarity=0.355 Sum_probs=90.9
Q ss_pred CCCCeEEEecCCeEEEEEEcCC-----CCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCC-eEE
Q 032508 3 RHPTVKWAQRTDRVYITIDLPD-----AQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLR-NIH 76 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~-----~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~-kve 76 (139)
.+|+|.|+||.+.|+|+|.+++ +++++|+|+++ +|+|++++ ..+.++++||++|+|++|+|++.++ .|+
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~kg----~~~~~~~~L~~~I~~e~s~w~i~~~k~v~ 80 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLKG----QPPVVDGELYNEVKVEESSWLIEDGKVVT 80 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEETT----SCCSBCSCBSSCBCSTTCEEEEETTTEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEECC----ceEEEecccccccccccCEEEEcCCCEEE
Confidence 4799999999999999999995 37999999997 99999763 4567899999999999999999886 699
Q ss_pred EEEEecCCc-cccccccccccCCCceeecCccc-ccCccc
Q 032508 77 YLVKKAENK-WWSRLLKQAGKPPVFLKVDWDKW-IDEDEE 114 (139)
Q Consensus 77 i~L~K~~~~-~W~~L~~~~~k~~~~~~~Dwd~~-~de~d~ 114 (139)
|+|+|++++ +|++|+++++++. ..+++.++- ..+.|+
T Consensus 81 i~L~K~~~~~~W~~L~~~~~~id-~~ki~pe~~~~~dld~ 119 (131)
T 1wfi_A 81 VHLEKINKMEWWNRLVTSDPEIN-TKKINPENSKLSDLDS 119 (131)
T ss_dssp EEEEBSSSCCCCSCSBSSCCSCC-CSSSSCCCCSCCCCCC
T ss_pred EEEEECCCCCCChhhhcCCCCCC-ccEecCCCCCcccCCH
Confidence 999999986 9999999988876 788888765 344444
No 10
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.88 E-value=2.8e-22 Score=142.89 Aligned_cols=90 Identities=10% Similarity=0.217 Sum_probs=80.3
Q ss_pred CCCeEEEec-CCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCCC-----------CCcEEEEEecccccccCCceEE
Q 032508 4 HPTVKWAQR-TDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGPD-----------KIPYEVDIDLYDKVDVNESKAS 69 (139)
Q Consensus 4 ~P~~~W~Qt-~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~~-----------~~~y~~~l~L~~~I~pe~s~~~ 69 (139)
.|+|+|||| .+.|+|+|+++++ ++++|+|+++ +|+|++....+ ...|.++++||++|+|++|+|+
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence 589999999 9999999999987 7899999997 99999875211 1279999999999999999999
Q ss_pred ecCCeEEEEEEecCCcccccccccc
Q 032508 70 VGLRNIHYLVKKAENKWWSRLLKQA 94 (139)
Q Consensus 70 i~~~kvei~L~K~~~~~W~~L~~~~ 94 (139)
+.+++|+|+|+|+++.+|++|++..
T Consensus 98 v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp ECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred EeCCEEEEEEEECCCCccccccccC
Confidence 9999999999999988999999653
No 11
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.86 E-value=2.3e-21 Score=135.81 Aligned_cols=97 Identities=20% Similarity=0.367 Sum_probs=83.1
Q ss_pred CCCCeEEEecCCeEEEEEEcCC-----CCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecC-CeEE
Q 032508 3 RHPTVKWAQRTDRVYITIDLPD-----AQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGL-RNIH 76 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~-----~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~-~kve 76 (139)
..|+|.|+||.+.|+|+|.++. ++++.|+|+++ +|+|.+++ ..|.++++||++|+|++|+|++.+ +.|+
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~kg----~~~~~~g~L~~~I~~deS~w~i~~~~~i~ 89 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLKG----QPAIIDGELYNEVKVEESSWLIADGAVVT 89 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEETT----SCCSEEEEBSSCBCGGGCEEEEETTTEEE
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEcC----cceEEeccccccccccccEEEEcCCCEEE
Confidence 3689999999999999999984 36999999997 99998763 467899999999999999999987 4899
Q ss_pred EEEEecCCc-cccccccccccCCCceeecC
Q 032508 77 YLVKKAENK-WWSRLLKQAGKPPVFLKVDW 105 (139)
Q Consensus 77 i~L~K~~~~-~W~~L~~~~~k~~~~~~~Dw 105 (139)
|+|.|++.+ +|++|+++++++. .-+++-
T Consensus 90 i~L~K~~~~~~W~~L~~~~~~id-~~ki~p 118 (121)
T 3qor_A 90 VHLEKINKMEWWSRLVSSDPEIN-TKKINP 118 (121)
T ss_dssp EEEEBSSSSCCCSCSBTTSCCBC-GGGCCT
T ss_pred EEEEECCCCCCChhhhcCCCCCc-cceeCC
Confidence 999999885 9999999987664 445543
No 12
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.83 E-value=3e-20 Score=135.46 Aligned_cols=90 Identities=20% Similarity=0.383 Sum_probs=79.6
Q ss_pred CCCCeEEEecCCeEEEEEEcCC---CCcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCCceEEecCCe-EEEE
Q 032508 3 RHPTVKWAQRTDRVYITIDLPD---AQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRN-IHYL 78 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~---~~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~s~~~i~~~k-vei~ 78 (139)
.+|+|.|+||.+.|+|+|.+++ ++++.|+|+++ +|+|++++ .. .++++||++|+|++|+|++.+++ |+|+
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~kg----~~-~l~g~L~~~I~~eeS~w~i~~~k~v~I~ 85 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVGG----RE-ILKGKLFDSTIADEGTWTLEDRKMVRIV 85 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEETT----EE-EEEEEBSSCBCGGGCEEEEECCCEEEEE
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEECC----EE-EEeeccccccCccccEEEEcCCcEEEEE
Confidence 4689999999999999999985 47999999997 99999863 34 58999999999999999999887 9999
Q ss_pred EEecCC---ccccccccccccCC
Q 032508 79 VKKAEN---KWWSRLLKQAGKPP 98 (139)
Q Consensus 79 L~K~~~---~~W~~L~~~~~k~~ 98 (139)
|+|+++ .+|++|++++.++.
T Consensus 86 L~K~~~~~~~~W~~L~k~~~~lD 108 (157)
T 2rh0_A 86 LTKTKRDAANCWTSLLESEYAAD 108 (157)
T ss_dssp EEBSSCSTTCCCSEEETTEEECC
T ss_pred EEEcCCCcCCcChhhhcCCCCCC
Confidence 999987 59999999887654
No 13
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.64 E-value=8.6e-08 Score=67.70 Aligned_cols=82 Identities=15% Similarity=0.282 Sum_probs=69.7
Q ss_pred CCCCeEEEecCCeEEEEEEcCCCC----cccEEEecCcEEEEEEEeCCCCCcEEEEEeccccc-ccCCc--eEEecCCeE
Q 032508 3 RHPTVKWAQRTDRVYITIDLPDAQ----DVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKV-DVNES--KASVGLRNI 75 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~~~----~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I-~pe~s--~~~i~~~kv 75 (139)
++|+|.=.|+.+.|+|.|.++.++ ++.+.+..+ .|.|.+ .+|.|.|.|=++| +++.+ +|......+
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~------~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~ 74 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHL------SPYYLRLRFPHELIDDERSTAQYDSKDECI 74 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECS------SSSCEEECCSSCEECCSSCEEEEETTTTEE
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEec------CCeEEEecCCCeeecCCCcceeEeccCCEE
Confidence 689999999999999999999765 888888876 888875 3799999999999 66554 555566889
Q ss_pred EEEEEecCCc-cccccc
Q 032508 76 HYLVKKAENK-WWSRLL 91 (139)
Q Consensus 76 ei~L~K~~~~-~W~~L~ 91 (139)
.|+|.|..+| .++-|-
T Consensus 75 ~VtLpK~~~Ge~F~dLD 91 (134)
T 2k8q_A 75 NVKVAKLNKNEYFEDLD 91 (134)
T ss_dssp EEEEEESSTTCCCSSTT
T ss_pred EEEEeCCCCCCCCCCcc
Confidence 9999999988 899875
No 14
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.62 E-value=9.3e-07 Score=60.69 Aligned_cols=83 Identities=13% Similarity=0.254 Sum_probs=69.6
Q ss_pred CCCCCeEEEecCCeEEEEEEcCCC----CcccEEEecCcEEEEEEEeCCCCCcEEEEEecccccccCC---ceEEecCCe
Q 032508 2 SRHPTVKWAQRTDRVYITIDLPDA----QDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE---SKASVGLRN 74 (139)
Q Consensus 2 ~~~P~~~W~Qt~~~V~ItI~l~~~----~~~~V~~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~pe~---s~~~i~~~k 74 (139)
.++|++.=.|+++.|+|.|.++.+ .++.+.+..+ -+.|.+. +|.|.|.|-++|..++ ++|......
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~~------PYyLRL~lP~~vved~~~~A~YD~d~g~ 87 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHLS------PYYLRLRFPHELIDDERSTAQYDSKDEC 87 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEET------TEEEEEECSSCEECSTTCEEEEETTTTE
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEecC------CeEEEEecCcceecCCCcceEEeCCCcE
Confidence 368999999999999999999964 4788889886 8888874 7999999999995433 377777889
Q ss_pred EEEEEEecCCc-cccccc
Q 032508 75 IHYLVKKAENK-WWSRLL 91 (139)
Q Consensus 75 vei~L~K~~~~-~W~~L~ 91 (139)
+.|+|.|..+| ..+-|-
T Consensus 88 ~~v~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 88 INVKVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEEEEESSTTCCCCCTT
T ss_pred EEEEEcCCcCCCcCCCcc
Confidence 99999999988 677663
No 15
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.46 E-value=5.1e-06 Score=55.07 Aligned_cols=81 Identities=12% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCCCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC----CC----------CcEEEEEecccccccCCc
Q 032508 3 RHPTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP----DK----------IPYEVDIDLYDKVDVNES 66 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~----~~----------~~y~~~l~L~~~I~pe~s 66 (139)
..|+++++++.+.+.|.+.+|++ ++++|.+..+ .|.+++.... .+ ..|.-.+.|-..|+++..
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i 81 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGI 81 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSC
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHe
Confidence 57999999999999999999987 5889999876 9999987521 11 146667889999999999
Q ss_pred eEEecCCeEEEEEEecCC
Q 032508 67 KASVGLRNIHYLVKKAEN 84 (139)
Q Consensus 67 ~~~i~~~kvei~L~K~~~ 84 (139)
+.++.++-+.|+|.|+.+
T Consensus 82 ~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 82 TAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEEETTEEEEEEEBC--
T ss_pred EEEEeCCEEEEEEecCCC
Confidence 999999999999999864
No 16
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.42 E-value=9.5e-06 Score=54.19 Aligned_cols=81 Identities=12% Similarity=0.185 Sum_probs=68.4
Q ss_pred CCCCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCCCC---------CcEEEEEecccccccCCceEEec
Q 032508 3 RHPTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGPDK---------IPYEVDIDLYDKVDVNESKASVG 71 (139)
Q Consensus 3 ~~P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~~~---------~~y~~~l~L~~~I~pe~s~~~i~ 71 (139)
..|+++++++.+.+.|.+.+|++ ++++|.++.+ .|.+++....++ ..|.-.+.|-..|+++..+.++.
T Consensus 5 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~ 83 (102)
T 4fei_A 5 WTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLA 83 (102)
T ss_dssp CCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEE
T ss_pred ccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEE
Confidence 57999999999999999999997 5889999886 999987642111 14677788999999999999999
Q ss_pred CCeEEEEEEecCC
Q 032508 72 LRNIHYLVKKAEN 84 (139)
Q Consensus 72 ~~kvei~L~K~~~ 84 (139)
.+-+.|+|.|+++
T Consensus 84 ~GvL~I~lpK~~~ 96 (102)
T 4fei_A 84 GGVLTVRFEKLRP 96 (102)
T ss_dssp TTEEEEEEEBSSC
T ss_pred CCEEEEEEEccCc
Confidence 9999999999875
No 17
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.11 E-value=5.4e-05 Score=52.05 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=67.5
Q ss_pred CCCeEEEecCCeEEEEEEcCCC--CcccEEEec-CcEEEEEEEeCCC-CC---------cEEEEEecccccccCCc-eEE
Q 032508 4 HPTVKWAQRTDRVYITIDLPDA--QDVKLKLEP-EGKFFFSATSGPD-KI---------PYEVDIDLYDKVDVNES-KAS 69 (139)
Q Consensus 4 ~P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~-~~~l~~~~~~~~~-~~---------~y~~~l~L~~~I~pe~s-~~~ 69 (139)
.|.++++++.+.+.|.+.+|++ ++++|.+.. + .|.+++..... +. .|.-.+.|-..|+++.. +.+
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGK 102 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeE
Confidence 4899999999999999999997 588999987 6 99999874211 11 46667889999999998 888
Q ss_pred ecCCeEEEEEEecCCc
Q 032508 70 VGLRNIHYLVKKAENK 85 (139)
Q Consensus 70 i~~~kvei~L~K~~~~ 85 (139)
..++-+.|+|.|+.+.
T Consensus 103 ~~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 103 YENGVLTIRIPIAGTS 118 (123)
T ss_dssp EETTEEEEEEEGGGEE
T ss_pred EcCCEEEEEEEcCCCC
Confidence 8899999999998653
No 18
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=98.03 E-value=0.00012 Score=52.57 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=65.8
Q ss_pred CeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC----C-----------CCcEEEEEecccccccCCceE
Q 032508 6 TVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP----D-----------KIPYEVDIDLYDKVDVNESKA 68 (139)
Q Consensus 6 ~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~----~-----------~~~y~~~l~L~~~I~pe~s~~ 68 (139)
+++++++.+.+.|.+.|+++ ++++|.++.+ .|.+++.... . ...|.-.+.|=..|+++..+.
T Consensus 58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A 136 (161)
T 4eld_A 58 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASA 136 (161)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEE
T ss_pred ceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEE
Confidence 39999999999999999997 5888999886 9999887521 1 124667788999999999999
Q ss_pred EecCCeEEEEEEecCCc
Q 032508 69 SVGLRNIHYLVKKAENK 85 (139)
Q Consensus 69 ~i~~~kvei~L~K~~~~ 85 (139)
++..+-++|+|.|++..
T Consensus 137 ~~~nGvL~I~lpK~~~~ 153 (161)
T 4eld_A 137 KFENGVLSVILPKAESS 153 (161)
T ss_dssp EEETTEEEEEEEBCGGG
T ss_pred EEECCEEEEEEEcCCCC
Confidence 99999999999998653
No 19
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.95 E-value=0.00014 Score=51.84 Aligned_cols=82 Identities=22% Similarity=0.326 Sum_probs=66.1
Q ss_pred CCCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC----C----------CCcEEEEEecccccccCCce
Q 032508 4 HPTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP----D----------KIPYEVDIDLYDKVDVNESK 67 (139)
Q Consensus 4 ~P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~----~----------~~~y~~~l~L~~~I~pe~s~ 67 (139)
.|+++++++.+.+.|.+.++++ ++++|.+...+.|.+++.... . ...|.-.+.|-..|+++..+
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 122 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence 5899999999999999999997 477888843238999876411 0 12467788899999999999
Q ss_pred EEecCCeEEEEEEecCCc
Q 032508 68 ASVGLRNIHYLVKKAENK 85 (139)
Q Consensus 68 ~~i~~~kvei~L~K~~~~ 85 (139)
.++..+-+.|+|.|..+.
T Consensus 123 A~~~nGvL~I~lPK~~~~ 140 (151)
T 1gme_A 123 AGLENGVLTVTVPKAEVK 140 (151)
T ss_dssp EEEETTEEEEEEECCCCC
T ss_pred EEEECCEEEEEEEccCcC
Confidence 999999999999998653
No 20
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.60 E-value=0.00042 Score=46.06 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=64.0
Q ss_pred CeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeC--CCC-----CcEEEEEecccccccCCceEEe-cCCeE
Q 032508 6 TVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSG--PDK-----IPYEVDIDLYDKVDVNESKASV-GLRNI 75 (139)
Q Consensus 6 ~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~--~~~-----~~y~~~l~L~~~I~pe~s~~~i-~~~kv 75 (139)
.++++++.+.+.|.+.+++. ++++|.+..+ .|.+++... ..+ .+|.-.+.|-..|+++..+.++ ..+-+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 46788999999999999997 5888998876 999998751 111 2366678899999999999999 68999
Q ss_pred EEEEEecCCc
Q 032508 76 HYLVKKAENK 85 (139)
Q Consensus 76 ei~L~K~~~~ 85 (139)
.|+|.|..+.
T Consensus 82 ~I~lPK~~~~ 91 (101)
T 2wj5_A 82 SIQATPASAQ 91 (101)
T ss_dssp EEEECBCCCC
T ss_pred EEEEECCCcC
Confidence 9999997643
No 21
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.52 E-value=0.0025 Score=42.59 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=64.8
Q ss_pred CCeEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeC--CCC-----CcEEEEEecccccccCCceEEe-cCCe
Q 032508 5 PTVKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSG--PDK-----IPYEVDIDLYDKVDVNESKASV-GLRN 74 (139)
Q Consensus 5 P~~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~--~~~-----~~y~~~l~L~~~I~pe~s~~~i-~~~k 74 (139)
+....+++.+.+.|.+.+++. ++++|.+..+ .|.+++... ... ..|.-.+.|-..|+++..+.++ .++-
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv 81 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM 81 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence 456789999999999999997 5889999886 999998641 011 2366678899999999999999 7899
Q ss_pred EEEEEEecCC
Q 032508 75 IHYLVKKAEN 84 (139)
Q Consensus 75 vei~L~K~~~ 84 (139)
+.|+|.|..+
T Consensus 82 L~I~~PK~~~ 91 (106)
T 3l1e_A 82 LTFSGPKIPS 91 (106)
T ss_dssp EEEEEEBCCC
T ss_pred EEEEEEccCc
Confidence 9999999876
No 22
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.41 E-value=0.0026 Score=40.81 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=59.8
Q ss_pred EecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC-------CCCcEEEEEecccccccCCceEEec-CCeEEEEE
Q 032508 10 AQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP-------DKIPYEVDIDLYDKVDVNESKASVG-LRNIHYLV 79 (139)
Q Consensus 10 ~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~-------~~~~y~~~l~L~~~I~pe~s~~~i~-~~kvei~L 79 (139)
+++.+.+.|.+.+|+. ++++|.+..+ .|.+++.... ....|.-.+.|-..|+++..+.++. .+-+.|+|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence 3678899999999986 5889999886 9999987511 0135777889999999999999997 88999999
Q ss_pred EecC
Q 032508 80 KKAE 83 (139)
Q Consensus 80 ~K~~ 83 (139)
.|.+
T Consensus 82 PK~k 85 (85)
T 3q9p_A 82 PMPK 85 (85)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9853
No 23
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.19 E-value=0.004 Score=40.28 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=55.2
Q ss_pred ecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC--CC-----CcEEEEEecccccccCCceEEe-cCCeEEEEEE
Q 032508 11 QRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP--DK-----IPYEVDIDLYDKVDVNESKASV-GLRNIHYLVK 80 (139)
Q Consensus 11 Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~--~~-----~~y~~~l~L~~~I~pe~s~~~i-~~~kvei~L~ 80 (139)
++.+.+.|++.++++ ++++|.+..+ .|.+++.... .+ .+|.-.+.|-..|+++..+.++ ..+-+.|+|.
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence 467889999999997 4888888876 9999887410 11 2366678899999999999999 7899999999
Q ss_pred ecCC
Q 032508 81 KAEN 84 (139)
Q Consensus 81 K~~~ 84 (139)
|..+
T Consensus 82 K~~~ 85 (90)
T 2y1y_A 82 RKQV 85 (90)
T ss_dssp BC--
T ss_pred cCCC
Confidence 9764
No 24
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.95 E-value=0.006 Score=48.41 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=67.4
Q ss_pred CCCeEEEecCC----eEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC---C---CCcEEEEEecccccccCCceEEec
Q 032508 4 HPTVKWAQRTD----RVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP---D---KIPYEVDIDLYDKVDVNESKASVG 71 (139)
Q Consensus 4 ~P~~~W~Qt~~----~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~---~---~~~y~~~l~L~~~I~pe~s~~~i~ 71 (139)
.|.++.+.+.+ .+.|++.+++. ++++|.++.+ .|.+++.... + ...|.-.+.|-..|+++..+.++.
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~ 176 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATIT 176 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence 36788889988 89999999986 5889999876 9999887411 0 135888899999999999999998
Q ss_pred -CCeEEEEEEecCCc
Q 032508 72 -LRNIHYLVKKAENK 85 (139)
Q Consensus 72 -~~kvei~L~K~~~~ 85 (139)
.+-+.|+|.|+.+.
T Consensus 177 ~nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 177 TDDVLVIEAPVNEPN 191 (314)
T ss_dssp SSSEEEEEEEBSSCC
T ss_pred CCCEEEEEEeccCcc
Confidence 88999999998765
No 25
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.85 E-value=0.0054 Score=44.73 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=59.1
Q ss_pred eEEEecCCeEEEEEEcCCC--CcccEEEecCcEEEEEEEeCC--CC-----CcEEEEEecccccccCCceEEe-cCCeEE
Q 032508 7 VKWAQRTDRVYITIDLPDA--QDVKLKLEPEGKFFFSATSGP--DK-----IPYEVDIDLYDKVDVNESKASV-GLRNIH 76 (139)
Q Consensus 7 ~~W~Qt~~~V~ItI~l~~~--~~~~V~~~~~~~l~~~~~~~~--~~-----~~y~~~l~L~~~I~pe~s~~~i-~~~kve 76 (139)
++++++.+.+.|++.+++. ++++|++..+ .|.+++.... ++ .+|.-.+.|-..|+++..+.++ ..+-+.
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEE
Confidence 5778899999999999987 5888999876 9999887411 11 1366678899999999999999 688999
Q ss_pred EEEEecCC
Q 032508 77 YLVKKAEN 84 (139)
Q Consensus 77 i~L~K~~~ 84 (139)
|+|.|+..
T Consensus 145 I~lPK~~~ 152 (175)
T 2klr_A 145 VNGPRKQV 152 (175)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99999764
No 26
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=93.12 E-value=0.64 Score=36.69 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=54.1
Q ss_pred cCCeEEEEEEc-CCC--CcccEEEecCcEEEEEEEeCCCC----------CcEEEEEecccccccCCceEEecCCeEEEE
Q 032508 12 RTDRVYITIDL-PDA--QDVKLKLEPEGKFFFSATSGPDK----------IPYEVDIDLYDKVDVNESKASVGLRNIHYL 78 (139)
Q Consensus 12 t~~~V~ItI~l-~~~--~~~~V~~~~~~~l~~~~~~~~~~----------~~y~~~l~L~~~I~pe~s~~~i~~~kvei~ 78 (139)
+.+.+.|.+.+ |+. ++++|.++.+ .|++++...... ..|.-.+.|=..|+++..+.++..+-+.|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEE
Confidence 34468899999 886 5888999775 999998752111 135567788899999999999989999999
Q ss_pred EEec
Q 032508 79 VKKA 82 (139)
Q Consensus 79 L~K~ 82 (139)
|.|.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9885
No 27
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=21.18 E-value=1.7e+02 Score=19.83 Aligned_cols=36 Identities=11% Similarity=-0.039 Sum_probs=29.7
Q ss_pred CCCcEEEEEecccccccCCceEEecCCeEEEEEEecC
Q 032508 47 DKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAE 83 (139)
Q Consensus 47 ~~~~y~~~l~L~~~I~pe~s~~~i~~~kvei~L~K~~ 83 (139)
.+..|.+.++|-+ +.+++-..++.++.|.|+-.+..
T Consensus 64 ~~~~~~v~~dlPG-~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 64 GDQHIKVIAWLPG-VNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp CSSEEEEEEECTT-CCGGGEEEEEETTEEEEEEECCC
T ss_pred eCCEEEEEEECCC-CChHhEEEEEECCEEEEEEEEcc
Confidence 3457999999976 68999999999999999877654
Done!