Query 032513
Match_columns 139
No_of_seqs 146 out of 1069
Neff 6.5
Searched_HMMs 13730
Date Tue Mar 26 00:52:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032513.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032513hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wb8a2 d.44.1.1 (A:93-208) Fe 100.0 5.1E-54 3.7E-58 306.3 14.6 112 25-138 5-116 (116)
2 d1ma1a2 d.44.1.1 (A:92-204) Fe 100.0 8.8E-53 6.4E-57 298.7 13.9 112 25-138 2-113 (113)
3 d1mnga2 d.44.1.1 (A:93-203) Mn 100.0 1.5E-52 1.1E-56 296.6 13.8 111 24-137 1-111 (111)
4 d1gv3a2 d.44.1.1 (A:127-237) M 100.0 1.6E-52 1.2E-56 296.5 13.7 110 25-137 2-111 (111)
5 d2p4ka2 d.44.1.1 (A:84-198) Mn 100.0 3.2E-52 2.3E-56 296.5 13.8 113 25-139 2-115 (115)
6 d1idsa2 d.44.1.1 (A:86-199) Fe 100.0 4.6E-52 3.3E-56 295.4 14.2 112 25-138 2-113 (114)
7 d1p7ga2 d.44.1.1 (A:104-222) F 100.0 9.2E-52 6.7E-56 295.8 14.1 110 27-138 2-111 (119)
8 d1bsma2 d.44.1.1 (A:87-201) Ca 100.0 1.6E-51 1.2E-55 293.0 15.0 110 27-138 4-113 (115)
9 d1kkca2 d.44.1.1 (A:98-213) Mn 100.0 1.8E-51 1.3E-55 293.1 12.9 111 24-138 5-115 (116)
10 d2nyba2 d.44.1.1 (A:83-192) Fe 100.0 8E-51 5.8E-55 287.3 13.8 109 25-136 2-110 (110)
11 d1dt0a2 d.44.1.1 (A:84-197) Fe 100.0 1.9E-50 1.4E-54 286.9 13.2 109 27-138 3-111 (114)
12 d1my6a2 d.44.1.1 (A:89-198) Fe 100.0 3.4E-50 2.5E-54 284.1 13.9 109 24-136 1-110 (110)
13 d1uera2 d.44.1.1 (A:85-191) Ca 100.0 2.4E-50 1.7E-54 283.6 13.0 105 27-134 3-107 (107)
14 d1jr9a2 d.44.1.1 (A:92-202) Mn 100.0 4.9E-51 3.6E-55 288.9 9.0 110 25-138 2-111 (111)
15 d1coja2 d.44.1.1 (A:91-212) Fe 100.0 3.1E-50 2.3E-54 288.9 13.2 111 24-138 1-111 (122)
16 d1unfx2 d.44.1.1 (X:105-238) F 100.0 1.9E-49 1.4E-53 288.7 14.4 113 24-138 1-130 (134)
17 d1ix9a2 d.44.1.1 (A:91-205) Mn 100.0 4.2E-49 3.1E-53 280.4 14.0 110 27-138 2-115 (115)
18 d1y67a2 d.44.1.1 (A:98-213) Mn 100.0 1.2E-48 9E-53 278.2 14.0 109 28-138 2-114 (116)
19 d2jb0b1 d.4.1.1 (B:449-572) DN 61.3 2.2 0.00016 28.4 2.3 26 30-55 29-55 (124)
20 d1kfta_ a.60.2.3 (A:) Excinucl 54.0 3.7 0.00027 23.0 2.2 32 30-61 11-42 (56)
21 d2gykb1 d.4.1.1 (B:4-133) DNas 50.1 2.3 0.00017 28.5 0.9 27 30-56 32-59 (130)
22 d1x2ia1 a.60.2.5 (A:2-69) ATP- 48.1 5.8 0.00043 22.9 2.5 32 30-61 19-50 (68)
23 d3cjsb1 d.47.1.1 (B:1-70) Ribo 35.9 34 0.0025 20.0 4.6 36 24-60 14-50 (70)
24 d1r89a1 a.160.1.3 (A:143-257) 32.5 11 0.00083 24.4 2.1 22 29-50 28-49 (115)
25 d2bgwa1 a.60.2.5 (A:160-229) D 29.5 9.3 0.00068 22.0 1.2 20 30-49 22-41 (70)
26 d1mmsa2 d.47.1.1 (A:8-70) Ribo 29.3 30 0.0022 19.8 3.5 36 24-60 8-44 (63)
27 d2a1jb1 a.60.2.5 (B:219-296) D 29.1 12 0.00089 21.9 1.7 32 29-60 27-58 (78)
28 d1914a2 d.49.1.1 (A:2001-2097) 24.1 65 0.0048 19.6 4.7 30 44-73 6-35 (97)
29 d1ywfa1 c.45.1.5 (A:4-275) Pho 22.6 23 0.0017 25.2 2.5 18 33-50 239-256 (272)
No 1
>d1wb8a2 d.44.1.1 (A:93-208) Fe superoxide dismutase (FeSOD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00 E-value=5.1e-54 Score=306.35 Aligned_cols=112 Identities=37% Similarity=0.595 Sum_probs=105.6
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
|++.|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+++++|.|++|+||+.+...+ ..||||||||||
T Consensus 5 Gg~~P~g~l~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~~~~~~~l~i~~~~n~~~~~~~~--~~piL~lDvWEH 82 (116)
T d1wb8a2 5 GGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFENHFQNHIAE--IPIILILDEFEH 82 (116)
T ss_dssp BSSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTTTCCEEEEEEETTTBSCCSS--CCEEEEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHhcCcccceEEEEEeCcCCcccccccccCCCCccCC--Cceeeeecchhh
Confidence 445799999999999999999999999999999999999999999988999999999997665556 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|||+||+|+|++||++||++|||++||+||++|+
T Consensus 83 AYyldY~n~r~~Yi~~~~~~iNW~~ve~rl~~~~ 116 (116)
T d1wb8a2 83 AYYLQYKNKRADYVNAWWNVVNWDAAEKKLQKYL 116 (116)
T ss_dssp GTHHHHTTCHHHHHHHHGGGBCHHHHHHHHHHTC
T ss_pred hhHHHHhccHHHHHHHHHHHcCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999985
No 2
>d1ma1a2 d.44.1.1 (A:92-204) Fe superoxide dismutase (FeSOD) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=100.00 E-value=8.8e-53 Score=298.71 Aligned_cols=112 Identities=34% Similarity=0.674 Sum_probs=105.7
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
+|++|+++|+++|+++|||+|+||++|+++|.++|||||+|||+++.+++|.|++++|++++...+ ..||||||||||
T Consensus 2 ~Gg~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~~~~~~~l~i~~~~~~~~~~~~~--~~plL~lDvWEH 79 (113)
T d1ma1a2 2 CGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHNVNVIPH--FRILLVLDVWEH 79 (113)
T ss_dssp SCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTT--CCCSEEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHhccccceeEEEEEecCCCceeeeeccCCcccccCC--CeeEEEEecchh
Confidence 345799999999999999999999999999999999999999999988899999999998776666 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|||+||+|+|++||++||++|||++|++||++++
T Consensus 80 AYyldY~n~r~~Yi~~~~~~InW~~v~~r~~~~l 113 (113)
T d1ma1a2 80 AYYIDYRNVRPDYVEAFWNIVNWKEVEKRFEDIL 113 (113)
T ss_dssp GTHHHHTTCHHHHHHHHTTTBCHHHHHHHHHTTC
T ss_pred hhHHHHCccHHHHHHHHHHHcCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999875
No 3
>d1mnga2 d.44.1.1 (A:93-203) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.5e-52 Score=296.65 Aligned_cols=111 Identities=46% Similarity=0.888 Sum_probs=104.8
Q ss_pred CCCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCc
Q 032513 24 GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWE 103 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwE 103 (139)
||+++|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+. ++|.|++++|++++...| .+|||||||||
T Consensus 1 GGg~~P~g~L~~~Ie~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~~~~-~~l~i~~~~~~~~~~~~~--~~Pll~lDvWE 77 (111)
T d1mnga2 1 GGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPF-GKLHVLSTPNQDNPVMEG--FTPIVGIDVWE 77 (111)
T ss_dssp TSCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTT-SCEEEEEEETTCCGGGGT--CEEEEEEECSG
T ss_pred CcCCCCCHHHHHHHHHHhCCHHHHHHHHHHhhcccccceEEEEEECCC-CcEEEEEecCCCcccccC--CcceEEEehhh
Confidence 456789999999999999999999999999999999999999999974 789999999998776677 79999999999
Q ss_pred hhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhh
Q 032513 104 HAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 137 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~ 137 (139)
||||+||+|+|++||++||++|||++||+||++|
T Consensus 78 HAYy~Dy~n~r~~Yi~~~~~~inW~~v~~r~~~A 111 (111)
T d1mnga2 78 HAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKKA 111 (111)
T ss_dssp GGTHHHHTTCHHHHHHHHTTTCCHHHHHHHHHTC
T ss_pred hccHhhhhccHHHHHHHHHHHcCHHHHHHHHHhC
Confidence 9999999999999999999999999999999986
No 4
>d1gv3a2 d.44.1.1 (A:127-237) Mn superoxide dismutase (MnSOD) {Anabaena sp. [TaxId: 1167]}
Probab=100.00 E-value=1.6e-52 Score=296.49 Aligned_cols=110 Identities=41% Similarity=0.820 Sum_probs=103.6
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
|+++|+|.|+++|+++|||+|+||++|+++|.++|||||+|||+|++ ++|.|++++|++.++..+ .+||||||||||
T Consensus 2 Ggg~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~-~~l~i~~~~~~~~p~~~~--~~PlL~iDvWEH 78 (111)
T d1gv3a2 2 GGGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQ-GQLQVVSTPNQDNPIMEG--SYPIMGNDVWEH 78 (111)
T ss_dssp CCSSCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTT-SCEEEEEEETTCCGGGGT--CEEEEEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHhccccCceEEEEECCC-CCEEEEEecCCCCccccC--CEEEEEechhhh
Confidence 45689999999999999999999999999999999999999999974 899999999998666667 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhh
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 137 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~ 137 (139)
|||+||+|+|++||++||++|||++||+||++|
T Consensus 79 AYylDy~n~r~~Yv~~~~~~inW~~v~~r~~~A 111 (111)
T d1gv3a2 79 AYYLRYQNRRPEYLNNWWNVVNWSEINRRTQAS 111 (111)
T ss_dssp GTHHHHTTCHHHHHHHGGGGBCHHHHHHHHHHC
T ss_pred hhHHhhhccHHHHHHHHHHHcCHHHHHHHHHcC
Confidence 999999999999999999999999999999975
No 5
>d2p4ka2 d.44.1.1 (A:84-198) Mn superoxide dismutase (MnSOD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.2e-52 Score=296.53 Aligned_cols=113 Identities=52% Similarity=0.978 Sum_probs=105.4
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccc-cCCCCCceEEEeccCc
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLV-TKAPTLVPLLGIDVWE 103 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~-~~g~~~~PlL~iDvwE 103 (139)
|++.|+|.|+++|+++|||+|+||++|+++|.++|||||||||+|+.++++.+.++.+++|+. ..| .+|||||||||
T Consensus 2 Ggg~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~fGsGWvwLv~~~~~~~~~~~~~~~~~~~~~~~~--~~PlL~lDvWE 79 (115)
T d2p4ka2 2 GGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPLQGTTG--LIPLLGIDVWE 79 (115)
T ss_dssp CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEEETTTTEEEEEEEETTCCHHHHHC--CEEEEEEECSG
T ss_pred CCCCCCHHHHHHHHHHcCCHHHHHHHHHhhhcccccccEEEEEEeccCceeeEEecCCCCCcccccC--ceeEEEEechh
Confidence 456899999999999999999999999999999999999999999998999999999998763 345 79999999999
Q ss_pred hhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhCC
Q 032513 104 HAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 139 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~~ 139 (139)
||||+||+|+|++||++||++|||++|++||++|.+
T Consensus 80 HAYylDy~n~r~~Yi~~~~~~InW~~V~~r~~~A~k 115 (115)
T d2p4ka2 80 HAYYLQYKNVRPDYLKAIWNVINWENVTERYMACKK 115 (115)
T ss_dssp GGTHHHHTTCHHHHHHHHGGGBCHHHHHHHHHGGGC
T ss_pred hHHHHhhhccHHHHHHHHHHhcCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999863
No 6
>d1idsa2 d.44.1.1 (A:86-199) Fe superoxide dismutase (FeSOD) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=4.6e-52 Score=295.39 Aligned_cols=112 Identities=40% Similarity=0.743 Sum_probs=105.7
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
|++.|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+.+++|.|+++.+++++...+ .+||||||||||
T Consensus 2 Gg~~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~~~~l~i~~~~~~~~~~~~~--~~PlL~lDvWEH 79 (114)
T d1idsa2 2 GGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQTNFPLG--IVPLLLLDMWEH 79 (114)
T ss_dssp CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHCCSSSEEEEEEEETTTTEEEEEEEETTTBSSCTT--EEEEEEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHhhhccccceeEEEEEecCCCceeEEEecCCCCCCccc--ceEEEEeechhh
Confidence 456899999999999999999999999999999999999999999988999999999998765556 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|||+||+++|++||++||++|||++|++||++|+
T Consensus 80 AYylDY~n~r~~Yi~~~~~~inW~~v~~r~~~a~ 113 (114)
T d1idsa2 80 AFYLQYKNVKVDFAKAFWNVVNWADVQSRYAAAT 113 (114)
T ss_dssp GTHHHHTTCHHHHHHHGGGSBCHHHHHHHHHHHH
T ss_pred hhHhhhhccHHHHHHHHHHHcCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999885
No 7
>d1p7ga2 d.44.1.1 (A:104-222) Fe superoxide dismutase (FeSOD) {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=100.00 E-value=9.2e-52 Score=295.80 Aligned_cols=110 Identities=33% Similarity=0.611 Sum_probs=104.9
Q ss_pred CCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCchhh
Q 032513 27 EPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAY 106 (139)
Q Consensus 27 ~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEHAY 106 (139)
++|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+++++|.|.+++||+|+...+ ..||||||||||||
T Consensus 2 g~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~fGsGW~wLv~~~~~~~l~i~~~~~~~~~~~~~--~~pll~lDvWEHAY 79 (119)
T d1p7ga2 2 GKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHNLMHAAD--AQVLLALDVWEHAY 79 (119)
T ss_dssp SCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTT--CEEEEEEECSGGGT
T ss_pred CCCCHHHHHHHHHHhCCHHHHHHHHHHhhhccccceEEEEEEeccCcceeeeeccCccccccCC--CeeEEEEechhhhh
Confidence 4699999999999999999999999999999999999999999988999999999999886656 79999999999999
Q ss_pred HhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 107 YLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 107 y~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|+||+|+|++||++||++|||++||+||++|+
T Consensus 80 ylDy~n~r~~Yi~~~~~~inW~~v~~r~~~A~ 111 (119)
T d1p7ga2 80 YLQYKNDRGSYVDNWWNVVNWDDVERRLQKAL 111 (119)
T ss_dssp HHHHTTCHHHHHHHHGGGBCHHHHHHHHHHHH
T ss_pred HHhhhccHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999875
No 8
>d1bsma2 d.44.1.1 (A:87-201) Cambialistic superoxide dismutase {Propionibacterium shermanii [TaxId: 1752]}
Probab=100.00 E-value=1.6e-51 Score=292.99 Aligned_cols=110 Identities=40% Similarity=0.713 Sum_probs=104.2
Q ss_pred CCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCchhh
Q 032513 27 EPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAY 106 (139)
Q Consensus 27 ~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEHAY 106 (139)
..|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+++++|.+++++++++++..| .+||||||||||||
T Consensus 4 ~~P~g~L~~~I~~~FGS~~~fk~~f~~~A~~~~GsGWvwLv~~~~~~~l~~~~~~~~~~~~~~~--~~PlL~iDvWEHAY 81 (115)
T d1bsma2 4 ERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNLPAG--SIPLLQLDMWEHAF 81 (115)
T ss_dssp SSCCHHHHHHHHHHHSSHHHHHHHHHHHHHCCSSSEEEEEEEETTTTEEEEEEEETTTBSCCTT--CEEEEEEECSGGGT
T ss_pred CCCCHHHHHHHHHHhCCHHHHHHHHHHhhhcccccceEEEEEecccCeeeeeecccCCCCCCCC--CeeEEEeechhhhh
Confidence 4699999999999999999999999999999999999999999988889999999997665566 79999999999999
Q ss_pred HhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 107 YLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 107 y~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|+||+|+|++||++||++|||++|++||++|+
T Consensus 82 yldY~n~r~~Yi~~~~~~INW~~V~~r~~~A~ 113 (115)
T d1bsma2 82 YLQYKNVKGDYVKSWWNVVNWDDVALRFSEAR 113 (115)
T ss_dssp HHHHTTCHHHHHHHHHTTBCHHHHHHHHHHTT
T ss_pred HHhhhccHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999985
No 9
>d1kkca2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD) {Aspergillus fumigatus [TaxId: 5085]}
Probab=100.00 E-value=1.8e-51 Score=293.10 Aligned_cols=111 Identities=41% Similarity=0.746 Sum_probs=103.9
Q ss_pred CCCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCc
Q 032513 24 GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWE 103 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwE 103 (139)
||+.+|++.|+++|+++|||+|+||++|+++|.++|||||+|||+|+.+++|.+++++|++|+ .+ .+|||||||||
T Consensus 5 gg~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGWvwLv~~~~~~~l~~~~~~~~~~~--~~--~~PlL~lDvWE 80 (116)
T d1kkca2 5 GGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPV--TG--AAPVFGVDMWE 80 (116)
T ss_dssp BTCGGGCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEESSTTCCEEEEEEETTCCC--CS--SEEEEEEECSG
T ss_pred CCCCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHhccccceEEEEeccCCCceEEeecCCCCCc--CC--CcceEEeecch
Confidence 344468889999999999999999999999999999999999999998899999999999887 45 79999999999
Q ss_pred hhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 104 HAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
||||+||+|+|++||++||++|||++|++||.+|.
T Consensus 81 HAYylDY~n~r~~Yi~~~~~~InW~~v~~r~~~a~ 115 (116)
T d1kkca2 81 HAYYLQYLNDKASYAKGIWNVINWAEAENRYIAGD 115 (116)
T ss_dssp GGTHHHHTTCHHHHHHHHGGGBBHHHHHHHHHHTC
T ss_pred hccHhhhhccHHHHHHHHHHHcCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999885
No 10
>d2nyba2 d.44.1.1 (A:83-192) Fe superoxide dismutase (FeSOD) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=8e-51 Score=287.31 Aligned_cols=109 Identities=33% Similarity=0.765 Sum_probs=101.2
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
|+++|++.|+++|+++|||+|+||++|+++|.++|||||+|||++++ ++|.++++.|++++...+ .+||||||||||
T Consensus 2 ggg~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~~-~~l~~~~~~~~~~~~~~~--~~PlL~lDvWEH 78 (110)
T d2nyba2 2 AGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSD-GKLAIVSTSNAGTPLTTD--ATPLLTVDVWEH 78 (110)
T ss_dssp CCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTT-SCEEEEEEETTCCGGGSS--CEEEEEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCceEEEEEeccc-cceeeEeecccccccccC--CeeeEEeehhhh
Confidence 45579999999999999999999999999999999999999999985 778889999987665566 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHh
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 136 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~ 136 (139)
|||+||+|+|++||++||++|||++||+||++
T Consensus 79 AYylDy~n~r~~Yi~~~~~~iNW~~v~~R~~a 110 (110)
T d2nyba2 79 AYYIDYRNARPGYLEHFWALVNWEFVAKNLAA 110 (110)
T ss_dssp GTHHHHTTCHHHHHHHHHTTBCHHHHHHHHHC
T ss_pred hhHHHHCcCHHHHHHHHHHhcCHHHHHHHhcC
Confidence 99999999999999999999999999999973
No 11
>d1dt0a2 d.44.1.1 (A:84-197) Fe superoxide dismutase (FeSOD) {Pseudomonas ovalis [TaxId: 303]}
Probab=100.00 E-value=1.9e-50 Score=286.93 Aligned_cols=109 Identities=32% Similarity=0.736 Sum_probs=101.7
Q ss_pred CCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCchhh
Q 032513 27 EPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAY 106 (139)
Q Consensus 27 ~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEHAY 106 (139)
++|+|.|+++|+++|||+|+||++|+++|.++|||||+||+.+++ +++.++++.|++.+...| .+||||||||||||
T Consensus 3 g~P~g~L~~~I~~~FGS~e~fk~~f~~~a~~~~GsGW~wL~~~~~-~~~~~~~~~n~~~p~~~~--~~PlL~lDvWEHAY 79 (114)
T d1dt0a2 3 GQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKAD-GSLALASTIGAGCPLTIG--DTPLLTCDVWEHAY 79 (114)
T ss_dssp SCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCCSSEEEEEEECTT-SCEEEEEEETTCCGGGGT--CEEEEEEECSGGGT
T ss_pred CCCCHHHHHHHHHHhCCHHHHHHHHHHhhhccccceEEEEEEccC-CcEEEEeccccCCccccC--CEEEEEeecceecc
Confidence 479999999999999999999999999999999999999999875 778888899987665566 79999999999999
Q ss_pred HhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 107 YLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 107 y~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|+||+|+|++||++||++|||++||+||++++
T Consensus 80 ylDY~n~r~~Yi~~~~~~iNW~~v~~r~~~a~ 111 (114)
T d1dt0a2 80 YIDYRNLRPKYVEAFWNLVNWAFVAEQFEGKT 111 (114)
T ss_dssp HHHHTTCHHHHHHHHTTTBCHHHHHHHHSSSC
T ss_pred HhhhhccHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence 99999999999999999999999999999775
No 12
>d1my6a2 d.44.1.1 (A:89-198) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=100.00 E-value=3.4e-50 Score=284.06 Aligned_cols=109 Identities=39% Similarity=0.799 Sum_probs=101.0
Q ss_pred CCCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCc
Q 032513 24 GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWE 103 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwE 103 (139)
||++.|+|.|+++|+++|||+|+||++|+++|.++|||||+||++++ ++|.|+++.|++.++..+ .+|||||||||
T Consensus 1 Ggg~~P~g~L~~~I~~~FGS~e~fk~~f~~~a~~~~GsGW~wL~~~~--~~l~i~~~~~~~~p~~~~--~~PlL~lD~WE 76 (110)
T d1my6a2 1 GGGGVPTGDVAARINSAFGSYDEFKAQFKNAAATQFGSGWAWLVLEA--GTLKVTKTANAENPLVHG--QVPLLTIDVWE 76 (110)
T ss_dssp TCCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEET--TEEEEEEEETTCCGGGGT--CEEEEEEECSG
T ss_pred CcCCCCCHHHHHHHHHHcCCHHHHHHHHHHHhhccccceEEEEEeeC--CcceEEEecccCcccccC--CceeEEeechh
Confidence 45678999999999999999999999999999999999999999984 889999999987555566 79999999999
Q ss_pred hhhHhhhcCChHHHHHHHhh-cCCHHHHHHHHHh
Q 032513 104 HAYYLQYKNVKPDYLKNIWN-VMNWKYASDVYQK 136 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~-~inW~~v~~r~~~ 136 (139)
||||+||+|+|++||++||+ +|||++||+||++
T Consensus 77 HAYylDy~n~r~~Yi~~~~~~~InW~~v~~r~~a 110 (110)
T d1my6a2 77 HAYYLDYQNRRPDFIDNFLNQLVNWDFVAKNLAA 110 (110)
T ss_dssp GGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHC
T ss_pred hhhHHHHcccHHHHHHHHHHhccCHHHHHHHhcC
Confidence 99999999999999999996 8999999999973
No 13
>d1uera2 d.44.1.1 (A:85-191) Cambialistic superoxide dismutase {Porphyromonas gingivalis [TaxId: 837]}
Probab=100.00 E-value=2.4e-50 Score=283.62 Aligned_cols=105 Identities=45% Similarity=0.914 Sum_probs=99.7
Q ss_pred CCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCchhh
Q 032513 27 EPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAY 106 (139)
Q Consensus 27 ~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEHAY 106 (139)
++|+|.|+++|+++|||+|+||++|+++|.++|||||+|||.+++ ++|.|+++.|+++++..| .+||||||||||||
T Consensus 3 g~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wl~~~~~-~~l~i~~~~~~~~~~~~~--~~PlL~lDvWEHAY 79 (107)
T d1uera2 3 GAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDAN-GKLSIEKEPNAGNPVRKG--LNPLLGFDVWEHAY 79 (107)
T ss_dssp SCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEECTT-CCEEEEEEETTCCGGGGT--CEEEEEEECSGGGT
T ss_pred CCCcHHHHHHHHHHhCCHHHHHHHHHHHhhccccceEEEEEEcCC-CceEEEeecccCCccccC--CeEEEEecccccee
Confidence 479999999999999999999999999999999999999999974 889999999998776667 79999999999999
Q ss_pred HhhhcCChHHHHHHHhhcCCHHHHHHHH
Q 032513 107 YLQYKNVKPDYLKNIWNVMNWKYASDVY 134 (139)
Q Consensus 107 y~dY~n~r~~Yi~~~w~~inW~~v~~r~ 134 (139)
|+||+++|++||++||++|||++||+||
T Consensus 80 ylDY~n~r~~Yi~~~~~~INW~~v~~Rf 107 (107)
T d1uera2 80 YLTYQNRRADHLKDLWSIVDWDIVESRY 107 (107)
T ss_dssp HHHHTTCHHHHHHHHGGGBCHHHHHHHC
T ss_pred HHHHCcCHHHHHHHHHHHcCHHHHHhhC
Confidence 9999999999999999999999999997
No 14
>d1jr9a2 d.44.1.1 (A:92-202) Mn superoxide dismutase (MnSOD) {Bacillus halodenitrificans [TaxId: 1482]}
Probab=100.00 E-value=4.9e-51 Score=288.86 Aligned_cols=110 Identities=37% Similarity=0.816 Sum_probs=102.7
Q ss_pred CCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCch
Q 032513 25 GGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEH 104 (139)
Q Consensus 25 ~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwEH 104 (139)
|++.|+|.|+++|+++|||+|+||++|+++|.++|||||+|||.|+ ++|.|+++.+++.++..| ..||||||||||
T Consensus 2 gg~~P~g~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~--~~l~i~~~~~~~~p~~~~--~~PlL~iDvWEH 77 (111)
T d1jr9a2 2 GGGKPTGEVADKINDKYGSFEKFQEEFAAAAAGRFGSGWAWLVVNN--GEIEIMSTPIQDNPLMEG--KKPILGLDVWEH 77 (111)
T ss_dssp CCSSCCSHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEECCCCT--TCCCCEEEETTCCGGGGT--CCCSCEEECSGG
T ss_pred CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHhhccccceEEEEEecC--CCceEEeeccCCCCcccC--CeeEEEEechhh
Confidence 4568999999999999999999999999999999999999999985 789999999997655566 799999999999
Q ss_pred hhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 105 AYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 105 AYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|||+||+|+|++||++||++|||++||+||++|.
T Consensus 78 AYylDy~n~r~~Yi~~~~~~inW~~v~~r~~~A~ 111 (111)
T d1jr9a2 78 AYYLKYQNKRPDYISAFWNVVNWDEVAAQYSQAA 111 (111)
T ss_dssp GTTTTTTTCHHHHHHHHHHHCCHHHHHHHHHHHC
T ss_pred hhHHhhhccHHHHHHHHHHHcCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999873
No 15
>d1coja2 d.44.1.1 (A:91-212) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]}
Probab=100.00 E-value=3.1e-50 Score=288.92 Aligned_cols=111 Identities=33% Similarity=0.639 Sum_probs=103.7
Q ss_pred CCCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccCCCCCceEEEeccCc
Q 032513 24 GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWE 103 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~g~~~~PlL~iDvwE 103 (139)
||++.|++.|+++|+++|||+|+||++|+++|. +||||+|||+|+.+++|.|.+++|++++...+ .+|||||||||
T Consensus 1 GGgg~P~g~L~~~I~~~FGS~d~fk~~f~~~a~--~~~GW~wL~~~~~~~~l~i~~~~~~~~~~~~~--~~PlL~iDvWE 76 (122)
T d1coja2 1 GGKGEPSEALKKKIEEDIGGLDACTNELKAAAM--AFRGWAILGLDIFSGRLVVNGLDAHNVYNLTG--LIPLIVIDTYE 76 (122)
T ss_dssp TCBSCCCHHHHHHHHHHTSCHHHHHHHHHHHHH--HCSSEEEEEEETTTTEEEEEEESBTTBSCCTT--CEEEEEEECSG
T ss_pred CcCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHh--cCCCceeEEeecccCcceeeecCCCCCccccc--cceeeEEecch
Confidence 456789999999999999999999999999885 56899999999988999999999999887667 79999999999
Q ss_pred hhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 104 HAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
||||+||+|+|++||++||++|||++||+||++|+
T Consensus 77 HAYylDY~n~r~~Yi~~f~~~InW~~v~~r~~~A~ 111 (122)
T d1coja2 77 HAYYVDYKNKRPPYIDAFFKNINWDVVNERFEKAM 111 (122)
T ss_dssp GGTHHHHTTCHHHHHHHHHHTBBHHHHHHHHHHHH
T ss_pred hhhHHHhCccHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999874
No 16
>d1unfx2 d.44.1.1 (X:105-238) Fe superoxide dismutase (FeSOD) {Cowpea (Vigna unguiculata) [TaxId: 3917]}
Probab=100.00 E-value=1.9e-49 Score=288.70 Aligned_cols=113 Identities=40% Similarity=0.757 Sum_probs=102.5
Q ss_pred CCCCCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeC---------------CCCeeEEEEecCCC-ccc
Q 032513 24 GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDT---------------EFKRLVVETTANQD-PLV 87 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~---------------~~~~L~i~~t~n~~-p~~ 87 (139)
||+++|++.|+++|+++|||+|+||++|+++|.++|||||+|||+++ ..++|.|+++.|++ |++
T Consensus 1 gGg~~P~g~L~~~I~~~FGS~e~fk~~f~~~a~~~~GsGW~wLv~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~p~~ 80 (134)
T d1unfx2 1 GGGGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDGENAANPPSADEDNKLVVIKSPNAVNPLV 80 (134)
T ss_dssp TCCSCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEECGGGC---------CCCCSEEEEEEEETTCCGGG
T ss_pred CCCCCCCHHHHHHHHHHcCCHHHHHHHHHHHHhccCCceEEEEEEecccccccccccccccccccceEEEecccccCCcc
Confidence 46678999999999999999999999999999999999999999985 24679999999996 544
Q ss_pred cCCCCCceEEEeccCchhhHhhhcCChHHHHHHHhh-cCCHHHHHHHHHhhC
Q 032513 88 TKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWN-VMNWKYASDVYQKEC 138 (139)
Q Consensus 88 ~~g~~~~PlL~iDvwEHAYy~dY~n~r~~Yi~~~w~-~inW~~v~~r~~~~~ 138 (139)
..+ .+|||||||||||||+||+++|++||++||+ +|||++|++||++|.
T Consensus 81 ~~~--~~PlL~lDvWEHAYylDY~n~r~~Yl~~~~~~lINW~~V~~r~~~a~ 130 (134)
T d1unfx2 81 WGG--YYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAK 130 (134)
T ss_dssp SCS--EEEEEEEECSGGGTHHHHTTCHHHHHHHHHHHTBCHHHHHHHHHHHH
T ss_pred CCC--cceEEEEecchhhhHHHHCccHHHHHHHHHHhccCHHHHHHHHHHHh
Confidence 333 7999999999999999999999999999997 799999999999874
No 17
>d1ix9a2 d.44.1.1 (A:91-205) Mn superoxide dismutase (MnSOD) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.2e-49 Score=280.35 Aligned_cols=110 Identities=38% Similarity=0.785 Sum_probs=99.7
Q ss_pred CCCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCcccc----CCCCCceEEEeccC
Q 032513 27 EPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVT----KAPTLVPLLGIDVW 102 (139)
Q Consensus 27 ~~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~----~g~~~~PlL~iDvw 102 (139)
+.|+|+|+++|+++|||+|+||++|+++|.++|||||+||++++ ++|.|++|.|++.+.. .+...+||||||||
T Consensus 2 ~~~~G~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wL~~~~--~~l~i~~~~n~~~p~~~~~~~~~~~~PlL~lDvW 79 (115)
T d1ix9a2 2 TTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG--DKLAVVSTANQDSPLMGEAISGASGFPIMGLDVW 79 (115)
T ss_dssp CCCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEET--TEEEEEEEETTCCGGGCHHHHSCCSEEEEEEECS
T ss_pred CCCCHHHHHHHHHHhCCHHHHHHHHHHhhhcCccccEEEEeccC--CeeEEEeecccCCcccccccccCCCcceEEeehh
Confidence 46889999999999999999999999999999999999999985 6899999999964322 11226899999999
Q ss_pred chhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 103 EHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 103 EHAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
|||||+||+|+|++||++||++|||++||+||++|.
T Consensus 80 EHAYyldy~n~r~~Yi~~~~~~iNW~~v~~r~~~ak 115 (115)
T d1ix9a2 80 EHAYFLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK 115 (115)
T ss_dssp GGGTHHHHTTCHHHHHHHHHHHBCHHHHHHHHHHHC
T ss_pred hHHhHHHHhccHHHHHHHHHHHcCHHHHHHHHHhcC
Confidence 999999999999999999999999999999999874
No 18
>d1y67a2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD) {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00 E-value=1.2e-48 Score=278.24 Aligned_cols=109 Identities=44% Similarity=0.795 Sum_probs=99.4
Q ss_pred CCchhHHHHHHhhcCCHHHHHHHHHHHhhcCccCceEEEEEeCCCCeeEEEEecCCCccccC----CCCCceEEEeccCc
Q 032513 28 PPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTK----APTLVPLLGIDVWE 103 (139)
Q Consensus 28 ~p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~~L~i~~t~n~~p~~~~----g~~~~PlL~iDvwE 103 (139)
+|+|.|+++|+++|||+|+||++|+++|.++|||||+||++++ ++|.|.++.|++.+... +...+|||||||||
T Consensus 2 ~P~g~L~~~I~~~FGS~d~fk~~f~~~A~~~~GsGW~wL~~~~--~~l~i~~~~~~~~p~~~~~~~~~~~~Pll~iDvWE 79 (116)
T d1y67a2 2 QPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKD--GKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWE 79 (116)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHHHHHHHHHHCCSSEEEEEEEET--TEEEEEEEETTCCGGGCHHHHSCCSEEEEEEECSG
T ss_pred CCcHHHHHHHHHHhCCHHHHHHHHHHhhhccccceEEEEEecC--CEeccceeecCcCCcccccccccccceEEeechhH
Confidence 6999999999999999999999999999999999999999984 78999999999743221 11268999999999
Q ss_pred hhhHhhhcCChHHHHHHHhhcCCHHHHHHHHHhhC
Q 032513 104 HAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKEC 138 (139)
Q Consensus 104 HAYy~dY~n~r~~Yi~~~w~~inW~~v~~r~~~~~ 138 (139)
||||+||+++|++||++||++|||++||+||++|.
T Consensus 80 HAYylDy~n~r~~Yi~~~~~~inW~~v~~R~~~A~ 114 (116)
T d1y67a2 80 HAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 114 (116)
T ss_dssp GGTHHHHTTCHHHHHHHHTTTBCHHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHcCHHHHHHHHHHhc
Confidence 99999999999999999999999999999999874
No 19
>d2jb0b1 d.4.1.1 (B:449-572) DNase domain of colicin E7 {Escherichia coli [TaxId: 562]}
Probab=61.27 E-value=2.2 Score=28.37 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=19.3
Q ss_pred chhHHHHH-HhhcCCHHHHHHHHHHHh
Q 032513 30 HSSLGWAI-DTHFGSLEALIQKMSAEG 55 (139)
Q Consensus 30 ~~~L~~~I-~~~FGS~d~fk~~f~~~a 55 (139)
...+++.+ -+.|.|||.|++.|=.+.
T Consensus 29 P~qIadkLrGr~F~sFd~FR~afW~~V 55 (124)
T d2jb0b1 29 PDRIANKLRDKEFKSFDDFRKKFWEEV 55 (124)
T ss_dssp BHHHHHHHTTCEESSHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCcCCCHHHHHHHHHHHH
Confidence 34566554 467999999999996654
No 20
>d1kfta_ a.60.2.3 (A:) Excinuclease UvrC C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=54.02 E-value=3.7 Score=23.02 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=21.1
Q ss_pred chhHHHHHHhhcCCHHHHHHHHHHHhhcCccC
Q 032513 30 HSSLGWAIDTHFGSLEALIQKMSAEGAALQGS 61 (139)
Q Consensus 30 ~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~Gs 61 (139)
.+..++.|-+.|||++++++.=.+.-..+.|-
T Consensus 11 G~~~a~~L~~~F~s~~~i~~As~eeL~~v~GI 42 (56)
T d1kfta_ 11 GPKRRQMLLKYMGGLQGLRNASVEEIAKVPGI 42 (56)
T ss_dssp SSSHHHHHHHHHSCHHHHHHCCHHHHTTSSST
T ss_pred cHHHHHHHHHHhCCHHHHHHhhHHHHHhcCCC
Confidence 34678888889999999986433333334443
No 21
>d2gykb1 d.4.1.1 (B:4-133) DNase domain of colicin E9 {Escherichia coli [TaxId: 562]}
Probab=50.08 E-value=2.3 Score=28.49 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=19.8
Q ss_pred chhHHHHH-HhhcCCHHHHHHHHHHHhh
Q 032513 30 HSSLGWAI-DTHFGSLEALIQKMSAEGA 56 (139)
Q Consensus 30 ~~~L~~~I-~~~FGS~d~fk~~f~~~a~ 56 (139)
...+++.+ -+.|.|||.|++.|=.+..
T Consensus 32 P~qIadkLrGr~F~sFd~FR~afW~~Va 59 (130)
T d2gykb1 32 PDRIADKLRDKEFKSFDDFRKAVWEEVS 59 (130)
T ss_dssp BHHHHHHHTTCEESSHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCCccCCHHHHHHHHHHHHh
Confidence 34566544 4679999999999976653
No 22
>d1x2ia1 a.60.2.5 (A:2-69) ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=48.11 E-value=5.8 Score=22.90 Aligned_cols=32 Identities=28% Similarity=0.407 Sum_probs=22.0
Q ss_pred chhHHHHHHhhcCCHHHHHHHHHHHhhcCccC
Q 032513 30 HSSLGWAIDTHFGSLEALIQKMSAEGAALQGS 61 (139)
Q Consensus 30 ~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~Gs 61 (139)
+...++.|-+.|||++++++.=.+.-..+-|-
T Consensus 19 G~~~a~~L~~~f~s~~~i~~As~eeL~~i~GI 50 (68)
T d1x2ia1 19 SATLARRLLKHFGSVERVFTASVAELMKVEGI 50 (68)
T ss_dssp CHHHHHHHHHHHCSHHHHHHCCHHHHTTSTTC
T ss_pred CHHHHHHHHHHcCCHHHHHHhHHHHHHhCCCc
Confidence 45788888899999999986433333444443
No 23
>d3cjsb1 d.47.1.1 (B:1-70) Ribosomal protein L11, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=35.91 E-value=34 Score=19.98 Aligned_cols=36 Identities=19% Similarity=0.425 Sum_probs=27.5
Q ss_pred CCCCCCchhHHHHHHhhcC-CHHHHHHHHHHHhhcCcc
Q 032513 24 GGGEPPHSSLGWAIDTHFG-SLEALIQKMSAEGAALQG 60 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FG-S~d~fk~~f~~~a~~~~G 60 (139)
+|...|++.|..++- +.| ++-+|.++|+++.....|
T Consensus 14 aG~A~P~PPvGpaLG-~~GiNi~~Fck~fN~~T~~~~g 50 (70)
T d3cjsb1 14 AGKATPAPPVGPALG-QHGANIMEFVKAFNAATANMGD 50 (70)
T ss_dssp TTCCCSSTTHHHHHH-TTTCCHHHHHHHHHHHHGGGCS
T ss_pred cCCCCCCCCCcchhh-hcCcCHHHHHHHHHHHHHhcCC
Confidence 455667777888874 556 799999999999876654
No 24
>d1r89a1 a.160.1.3 (A:143-257) tRNA nucleotidyltransferase, second domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.50 E-value=11 Score=24.38 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=19.4
Q ss_pred CchhHHHHHHhhcCCHHHHHHH
Q 032513 29 PHSSLGWAIDTHFGSLEALIQK 50 (139)
Q Consensus 29 p~~~L~~~I~~~FGS~d~fk~~ 50 (139)
-+|-|.+.+.-.||||+++.+.
T Consensus 28 FSGYl~ElLi~~YGsF~~~lk~ 49 (115)
T d1r89a1 28 FSGYLCELLIVFYGSFLETVKN 49 (115)
T ss_dssp BCHHHHHHHHHHHSSHHHHHHH
T ss_pred chhHHHHHHHHHHCCHHHHHHH
Confidence 3789999999999999998764
No 25
>d2bgwa1 a.60.2.5 (A:160-229) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}
Probab=29.49 E-value=9.3 Score=21.96 Aligned_cols=20 Identities=30% Similarity=0.315 Sum_probs=16.7
Q ss_pred chhHHHHHHhhcCCHHHHHH
Q 032513 30 HSSLGWAIDTHFGSLEALIQ 49 (139)
Q Consensus 30 ~~~L~~~I~~~FGS~d~fk~ 49 (139)
+...++.|-+.|||++.+.+
T Consensus 22 G~~~a~~L~~~F~s~~~l~~ 41 (70)
T d2bgwa1 22 GRRTAERILERFGSLERFFT 41 (70)
T ss_dssp CHHHHHHHHHHHSSHHHHTT
T ss_pred CHHHHHHHHHHhCCHHHHHH
Confidence 45688899999999998874
No 26
>d1mmsa2 d.47.1.1 (A:8-70) Ribosomal protein L11, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=29.28 E-value=30 Score=19.80 Aligned_cols=36 Identities=25% Similarity=0.470 Sum_probs=25.4
Q ss_pred CCCCCCchhHHHHHHhhcC-CHHHHHHHHHHHhhcCcc
Q 032513 24 GGGEPPHSSLGWAIDTHFG-SLEALIQKMSAEGAALQG 60 (139)
Q Consensus 24 ~~~~~p~~~L~~~I~~~FG-S~d~fk~~f~~~a~~~~G 60 (139)
+|...|++.|..++- +.| ++-+|.++|.++.....|
T Consensus 8 aG~A~p~PPvGpaLG-~~GiNi~~F~k~fN~~Tk~~~g 44 (63)
T d1mmsa2 8 AGKATPAPPVGPALG-QHGVNIMEFCKRFNAETADKAG 44 (63)
T ss_dssp TTCCCCTTTTTHHHH-TTTCCHHHHHHHHHHHTTTSCS
T ss_pred cCCCCCCCCCcchhh-hcCcCHHHHHHHHHHHhcccCC
Confidence 445566666666663 556 799999999998766444
No 27
>d2a1jb1 a.60.2.5 (B:219-296) DNA excision repair protein ERCC-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.12 E-value=12 Score=21.91 Aligned_cols=32 Identities=31% Similarity=0.311 Sum_probs=20.8
Q ss_pred CchhHHHHHHhhcCCHHHHHHHHHHHhhcCcc
Q 032513 29 PHSSLGWAIDTHFGSLEALIQKMSAEGAALQG 60 (139)
Q Consensus 29 p~~~L~~~I~~~FGS~d~fk~~f~~~a~~~~G 60 (139)
....-++.|.+.|||++++++.=.+.-..+.|
T Consensus 27 Ig~~~a~~L~~~F~s~~~i~~A~~eeL~~i~G 58 (78)
T d2a1jb1 27 VNKTDSQTLLTTFGSLEQLIAASREDLALCPG 58 (78)
T ss_dssp CCHHHHHHHHHHHSSHHHHHSCCHHHHHTSSS
T ss_pred cCHHHHHHHHHHhCCcHHHHhhhHHHHHHhhh
Confidence 34567888889999999986533333333433
No 28
>d1914a2 d.49.1.1 (A:2001-2097) Signal recognition particle 14KDa protein, SRP14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.09 E-value=65 Score=19.65 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhcCccCceEEEEEeCCCC
Q 032513 44 LEALIQKMSAEGAALQGSGWVWLGLDTEFK 73 (139)
Q Consensus 44 ~d~fk~~f~~~a~~~~GsGW~wLv~d~~~~ 73 (139)
-|+|..++.+....-.++|=||+.....++
T Consensus 6 nd~FL~eLt~Lf~~~~~~gSV~vT~KR~~~ 35 (97)
T d1914a2 6 SEQFLTELTRLFQKCRSSGSVFITLKKYDG 35 (97)
T ss_dssp HHHHHHHHHHHHHHTSSSCCEEEEEEEEC-
T ss_pred HHHHHHHHHHHHHhcccCceEEEEEEecCC
Confidence 467777777776666678889998865443
No 29
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.59 E-value=23 Score=25.16 Aligned_cols=18 Identities=28% Similarity=0.490 Sum_probs=14.9
Q ss_pred HHHHHHhhcCCHHHHHHH
Q 032513 33 LGWAIDTHFGSLEALIQK 50 (139)
Q Consensus 33 L~~~I~~~FGS~d~fk~~ 50 (139)
..+.|++.|||++++.++
T Consensus 239 ~l~~i~~~yGs~~~YL~~ 256 (272)
T d1ywfa1 239 ARQTIDETYGSLGGYLRD 256 (272)
T ss_dssp HHHHHHHHHSSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHH
Confidence 446899999999999754
Done!