Query 032521
Match_columns 139
No_of_seqs 152 out of 1324
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 02:30:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/032521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.1E-29 2.4E-34 206.9 8.3 102 23-133 1-102 (371)
2 KOG0713 Molecular chaperone (D 99.9 3.5E-27 7.6E-32 188.8 7.5 76 23-98 13-88 (336)
3 KOG0712 Molecular chaperone (D 99.9 2E-23 4.3E-28 168.4 7.5 69 25-96 3-71 (337)
4 PRK14288 chaperone protein Dna 99.9 4.6E-23 9.9E-28 169.4 7.4 71 26-96 3-73 (369)
5 PRK14296 chaperone protein Dna 99.9 1.2E-22 2.7E-27 167.0 7.5 72 24-96 2-73 (372)
6 PRK14286 chaperone protein Dna 99.9 3E-22 6.6E-27 164.7 7.6 72 25-96 3-74 (372)
7 PTZ00037 DnaJ_C chaperone prot 99.9 3.7E-22 8E-27 166.3 8.2 72 21-96 23-94 (421)
8 PRK14279 chaperone protein Dna 99.9 4.3E-22 9.3E-27 164.8 7.5 69 25-93 8-76 (392)
9 PRK14287 chaperone protein Dna 99.9 1.8E-21 3.8E-26 160.1 9.0 71 25-96 3-73 (371)
10 PRK14282 chaperone protein Dna 99.9 1.4E-21 3.1E-26 160.5 7.9 73 24-96 2-75 (369)
11 PRK14294 chaperone protein Dna 99.9 1.4E-21 3.1E-26 160.3 7.8 73 24-96 2-74 (366)
12 PRK14297 chaperone protein Dna 99.8 2.6E-21 5.7E-26 159.5 7.8 72 25-96 3-74 (380)
13 PRK14301 chaperone protein Dna 99.8 2.8E-21 6.1E-26 159.0 7.7 72 25-96 3-74 (373)
14 PRK14285 chaperone protein Dna 99.8 3E-21 6.4E-26 158.5 7.7 71 26-96 3-73 (365)
15 PRK14277 chaperone protein Dna 99.8 3.2E-21 7E-26 159.2 7.9 72 25-96 4-75 (386)
16 PRK14276 chaperone protein Dna 99.8 3.4E-21 7.3E-26 158.8 7.5 72 25-97 3-74 (380)
17 PRK14295 chaperone protein Dna 99.8 4.4E-21 9.4E-26 158.6 7.9 72 25-96 8-83 (389)
18 PRK14283 chaperone protein Dna 99.8 3.8E-21 8.2E-26 158.4 7.5 73 24-97 3-75 (378)
19 PRK14299 chaperone protein Dna 99.8 5.9E-21 1.3E-25 152.5 7.8 70 25-95 3-72 (291)
20 PRK10767 chaperone protein Dna 99.8 7.9E-21 1.7E-25 156.1 7.8 72 25-96 3-74 (371)
21 KOG0691 Molecular chaperone (D 99.8 8.8E-21 1.9E-25 151.3 7.7 87 25-111 4-90 (296)
22 KOG0717 Molecular chaperone (D 99.8 2E-20 4.3E-25 154.8 9.5 104 22-127 4-114 (508)
23 PRK14280 chaperone protein Dna 99.8 9E-21 2E-25 156.1 7.5 72 25-97 3-74 (376)
24 PRK14284 chaperone protein Dna 99.8 1.1E-20 2.4E-25 156.3 7.5 70 27-96 2-71 (391)
25 PRK14298 chaperone protein Dna 99.8 1.1E-20 2.3E-25 155.7 7.4 72 25-97 4-75 (377)
26 KOG0716 Molecular chaperone (D 99.8 1E-20 2.3E-25 147.8 6.7 74 23-96 28-101 (279)
27 PRK14281 chaperone protein Dna 99.8 1.1E-20 2.4E-25 156.5 7.2 72 26-97 3-74 (397)
28 PF00226 DnaJ: DnaJ domain; I 99.8 1.8E-20 4E-25 117.8 6.0 63 27-89 1-64 (64)
29 PRK14291 chaperone protein Dna 99.8 1.6E-20 3.5E-25 154.9 7.3 70 26-96 3-72 (382)
30 PRK14292 chaperone protein Dna 99.8 3.2E-20 7E-25 152.5 8.9 69 26-95 2-70 (371)
31 PRK14278 chaperone protein Dna 99.8 1.6E-20 3.4E-25 154.8 7.0 68 26-94 3-70 (378)
32 PRK14289 chaperone protein Dna 99.8 3.8E-20 8.3E-25 152.8 7.8 72 25-96 4-75 (386)
33 KOG0715 Molecular chaperone (D 99.8 5.3E-20 1.1E-24 146.9 8.1 72 23-95 40-111 (288)
34 PRK14290 chaperone protein Dna 99.8 6.2E-20 1.3E-24 150.6 7.7 71 26-96 3-74 (365)
35 PTZ00341 Ring-infected erythro 99.8 7.6E-20 1.7E-24 162.2 8.4 82 19-101 566-647 (1136)
36 KOG0719 Molecular chaperone (D 99.8 1.3E-19 2.7E-24 139.3 8.1 95 18-112 6-103 (264)
37 TIGR02349 DnaJ_bact chaperone 99.8 1.2E-19 2.6E-24 148.2 7.2 69 27-96 1-69 (354)
38 PRK14300 chaperone protein Dna 99.8 1.3E-19 2.9E-24 149.0 7.0 70 26-96 3-72 (372)
39 KOG0718 Molecular chaperone (D 99.8 1.3E-19 2.8E-24 150.3 6.2 76 22-97 5-83 (546)
40 PRK10266 curved DNA-binding pr 99.8 2.3E-19 5E-24 144.2 6.9 69 24-93 2-70 (306)
41 PRK14293 chaperone protein Dna 99.8 3.7E-19 8E-24 146.5 7.1 70 26-96 3-72 (374)
42 smart00271 DnaJ DnaJ molecular 99.8 2.3E-18 4.9E-23 106.6 7.1 58 26-83 1-59 (60)
43 cd06257 DnaJ DnaJ domain or J- 99.7 7.9E-18 1.7E-22 102.3 7.0 55 27-81 1-55 (55)
44 KOG0624 dsRNA-activated protei 99.7 7.6E-18 1.7E-22 136.6 6.5 77 22-99 390-469 (504)
45 PHA03102 Small T antigen; Revi 99.7 1.4E-17 3.1E-22 121.7 6.3 70 25-98 4-75 (153)
46 KOG0721 Molecular chaperone (D 99.7 3.1E-17 6.7E-22 124.9 8.0 74 23-96 96-169 (230)
47 TIGR03835 termin_org_DnaJ term 99.7 1.5E-17 3.2E-22 145.0 6.9 71 26-97 2-72 (871)
48 COG2214 CbpA DnaJ-class molecu 99.7 3.2E-17 6.9E-22 122.2 7.3 69 23-91 3-72 (237)
49 PRK05014 hscB co-chaperone Hsc 99.6 7.2E-16 1.6E-20 114.8 7.5 66 26-91 1-73 (171)
50 PRK00294 hscB co-chaperone Hsc 99.6 1.2E-15 2.6E-20 113.8 7.6 69 23-91 1-76 (173)
51 PRK01356 hscB co-chaperone Hsc 99.6 1.6E-15 3.4E-20 112.5 7.0 66 26-91 2-72 (166)
52 PRK03578 hscB co-chaperone Hsc 99.6 2.9E-15 6.4E-20 112.0 7.8 65 26-90 6-77 (176)
53 KOG0714 Molecular chaperone (D 99.6 4.2E-15 9.2E-20 115.6 5.7 107 25-137 2-111 (306)
54 KOG0550 Molecular chaperone (D 99.6 4.1E-15 8.9E-20 122.6 5.8 70 22-91 369-439 (486)
55 KOG0720 Molecular chaperone (D 99.5 6.5E-15 1.4E-19 122.2 5.4 69 24-93 233-301 (490)
56 KOG0722 Molecular chaperone (D 99.5 7.9E-15 1.7E-19 114.4 3.9 69 24-93 31-99 (329)
57 PTZ00100 DnaJ chaperone protei 99.5 5.6E-14 1.2E-18 98.3 6.0 55 22-80 61-115 (116)
58 PRK09430 djlA Dna-J like membr 99.5 1E-13 2.3E-18 109.7 6.7 60 22-81 196-262 (267)
59 PHA02624 large T antigen; Prov 99.5 1.5E-13 3.2E-18 118.5 7.2 82 25-110 10-98 (647)
60 PRK01773 hscB co-chaperone Hsc 99.4 1.9E-12 4.1E-17 96.6 7.3 65 26-90 2-73 (173)
61 COG5407 SEC63 Preprotein trans 99.2 8.6E-12 1.9E-16 104.0 4.6 72 24-95 96-172 (610)
62 TIGR00714 hscB Fe-S protein as 99.2 3.2E-11 6.9E-16 88.7 6.6 56 37-92 2-62 (157)
63 COG5269 ZUO1 Ribosome-associat 99.2 2.6E-11 5.6E-16 95.7 6.2 94 20-113 37-139 (379)
64 KOG1150 Predicted molecular ch 99.2 4.2E-11 9.1E-16 90.7 5.8 81 7-87 34-115 (250)
65 KOG0568 Molecular chaperone (D 99.1 1.8E-10 3.9E-15 89.3 6.9 107 22-132 43-155 (342)
66 KOG1789 Endocytosis protein RM 98.6 9.9E-08 2.2E-12 86.6 5.8 58 20-80 1275-1336(2235)
67 KOG0723 Molecular chaperone (D 98.5 2.7E-07 5.8E-12 63.4 5.7 57 22-82 52-108 (112)
68 KOG3192 Mitochondrial J-type c 97.7 5.9E-05 1.3E-09 55.3 5.0 68 23-90 5-79 (168)
69 KOG0431 Auxilin-like protein a 97.5 0.00011 2.3E-09 62.5 4.4 45 19-63 365-425 (453)
70 COG1076 DjlA DnaJ-domain-conta 97.1 0.00038 8.2E-09 51.8 2.8 54 26-79 113-173 (174)
71 COG1076 DjlA DnaJ-domain-conta 96.8 0.0013 2.8E-08 49.0 3.1 69 28-96 3-78 (174)
72 PF03656 Pam16: Pam16; InterP 96.4 0.008 1.7E-07 42.8 5.1 57 21-81 53-109 (127)
73 PF13446 RPT: A repeated domai 91.0 0.6 1.3E-05 28.6 4.4 30 23-52 2-31 (62)
74 PF14687 DUF4460: Domain of un 90.5 0.81 1.8E-05 31.8 5.1 48 36-83 4-55 (112)
75 KOG0724 Zuotin and related mol 89.3 0.46 9.9E-06 38.5 3.6 54 37-90 3-60 (335)
76 PF11833 DUF3353: Protein of u 89.0 0.97 2.1E-05 34.4 5.0 38 35-80 1-38 (194)
77 COG5552 Uncharacterized conser 77.8 11 0.00025 24.4 5.6 36 25-60 2-37 (88)
78 KOG3442 Uncharacterized conser 59.1 15 0.00033 26.1 3.5 40 21-60 54-93 (132)
79 PF07709 SRR: Seven Residue Re 50.0 15 0.00033 15.8 1.5 13 68-80 2-14 (14)
80 KOG0718 Molecular chaperone (D 42.9 20 0.00044 31.1 2.3 44 10-53 55-109 (546)
81 PF10041 DUF2277: Uncharacteri 42.3 95 0.0021 20.2 6.4 46 25-71 2-47 (78)
82 PF12434 Malate_DH: Malate deh 41.9 35 0.00076 17.8 2.3 18 39-56 9-26 (28)
83 cd01388 SOX-TCF_HMG-box SOX-TC 29.2 1.3E+02 0.0028 18.4 4.0 40 45-89 14-53 (72)
84 KOG0527 HMG-box transcription 27.0 84 0.0018 25.9 3.5 41 45-90 75-115 (331)
85 PF08447 PAS_3: PAS fold; Int 24.6 20 0.00043 22.2 -0.5 29 26-58 6-35 (91)
86 KOG2320 RAS effector RIN1 (con 23.8 1.2E+02 0.0026 27.2 4.0 27 32-58 395-421 (651)
87 cd00084 HMG-box High Mobility 23.8 1.6E+02 0.0034 16.9 4.1 41 44-89 12-52 (66)
88 COG3755 Uncharacterized protei 23.6 1.5E+02 0.0032 21.1 3.8 45 37-88 47-92 (127)
89 PF12725 DUF3810: Protein of u 22.9 2.3E+02 0.0049 23.1 5.3 62 22-83 78-150 (318)
90 COG0089 RplW Ribosomal protein 21.9 75 0.0016 21.4 1.9 21 31-51 25-45 (94)
91 PF15178 TOM_sub5: Mitochondri 21.2 1.7E+02 0.0037 17.3 3.1 24 29-52 2-25 (51)
92 PF14706 Tnp_DNA_bind: Transpo 21.0 1.4E+02 0.0031 18.1 2.9 41 41-83 15-57 (58)
93 PF00076 RRM_1: RNA recognitio 20.8 74 0.0016 18.3 1.6 23 31-53 3-25 (70)
94 cd01389 MATA_HMG-box MATA_HMG- 20.1 2.3E+02 0.0049 17.5 3.9 41 44-89 13-53 (77)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-29 Score=206.86 Aligned_cols=102 Identities=41% Similarity=0.646 Sum_probs=85.1
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccccccHH
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLR 102 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~~~~~ 102 (139)
|..+|||+||||+++||.+|||+|||+||++||||+++.+++|+++|+.|++||+||+||++|+.||++|...++.....
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g 80 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG 80 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence 35689999999999999999999999999999999999888999999999999999999999999999998877621111
Q ss_pred HHHHHHhcchhcccCCCCCCchhhhhhhccC
Q 032521 103 EYLARFKGMILTCNGLGISHTSMWSQQLTET 133 (139)
Q Consensus 103 ~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 133 (139)
.+ .+.++|.+..++|+.||+++
T Consensus 81 --------g~-g~~~fgg~~~DIF~~~FgGg 102 (371)
T COG0484 81 --------GF-GFGGFGGDFGDIFEDFFGGG 102 (371)
T ss_pred --------CC-CcCCCCCCHHHHHHHhhcCC
Confidence 10 22333335788999999644
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.5e-27 Score=188.75 Aligned_cols=76 Identities=47% Similarity=0.789 Sum_probs=71.9
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
...+|||+||||+++|+..|||+|||+||+++|||+|+++|.|.+.|+.|+.||+||+||++|+.||.+|..++..
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 4458999999999999999999999999999999999999999999999999999999999999999999777664
No 3
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2e-23 Score=168.42 Aligned_cols=69 Identities=51% Similarity=0.761 Sum_probs=64.4
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
...||+||||+++||.+|||+|||+||++|||||++. +.++|++|..||+||+||++|..||++|..++
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 3589999999999999999999999999999999876 67999999999999999999999999997554
No 4
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.88 E-value=4.6e-23 Score=169.35 Aligned_cols=71 Identities=51% Similarity=0.797 Sum_probs=67.0
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.|||+||||+++||.+|||+|||+||++||||+++.++.++++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~ 73 (369)
T PRK14288 3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGL 73 (369)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhccccc
Confidence 69999999999999999999999999999999987677889999999999999999999999999987654
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=1.2e-22 Score=166.95 Aligned_cols=72 Identities=43% Similarity=0.644 Sum_probs=66.4
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
..+|||+||||+++|+.++||+|||+||++||||+++ .+.|+++|++|++||+||+||.+|..||.+|..++
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~ 73 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF 73 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhh
Confidence 3479999999999999999999999999999999986 46788999999999999999999999999987554
No 6
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.87 E-value=3e-22 Score=164.67 Aligned_cols=72 Identities=47% Similarity=0.790 Sum_probs=67.6
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||++||||+++.++++.++|++|++||+||+||.+|..||++|..++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 74 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhh
Confidence 479999999999999999999999999999999987777889999999999999999999999999987654
No 7
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.86 E-value=3.7e-22 Score=166.35 Aligned_cols=72 Identities=43% Similarity=0.695 Sum_probs=64.8
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
..+..+|||+||||+++||.++||+|||+||++||||+++. .++|++|++||+||+||.+|..||.+|..++
T Consensus 23 ~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~ 94 (421)
T PTZ00037 23 REVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGL 94 (421)
T ss_pred ccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhc
Confidence 34556899999999999999999999999999999999752 4899999999999999999999999887543
No 8
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.86 E-value=4.3e-22 Score=164.76 Aligned_cols=69 Identities=48% Similarity=0.713 Sum_probs=65.7
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
.+|||+||||+++|+.++||+|||+||++||||+++..+.+.++|++|++||+||+||++|+.||.+|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999988777889999999999999999999999999875
No 9
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.8e-21 Score=160.09 Aligned_cols=71 Identities=42% Similarity=0.731 Sum_probs=65.7
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
..|||+||||+++|+.++||+|||+||++||||+++ .++++++|+.|++||+||+||.+|+.||.+|..++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~ 73 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDP 73 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccc
Confidence 469999999999999999999999999999999976 46788999999999999999999999999987544
No 10
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.4e-21 Score=160.49 Aligned_cols=73 Identities=48% Similarity=0.805 Sum_probs=66.8
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
..+|||+||||+++|+.++||+|||+||++||||+++.. ..++++|++|++||+||+||.+|..||.+|..+.
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~ 75 (369)
T PRK14282 2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE 75 (369)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence 347999999999999999999999999999999998754 5688999999999999999999999999886554
No 11
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.4e-21 Score=160.32 Aligned_cols=73 Identities=49% Similarity=0.774 Sum_probs=68.2
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
..+|||+||||+++|+.++||+|||+||++||||+++..+.++++|+.|++||+||+||.+|..||.+|..++
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~ 74 (366)
T PRK14294 2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGL 74 (366)
T ss_pred CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccc
Confidence 4579999999999999999999999999999999988777889999999999999999999999999987654
No 12
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=2.6e-21 Score=159.47 Aligned_cols=72 Identities=47% Similarity=0.870 Sum_probs=67.5
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||++||||+++..+.++++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~ 74 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF 74 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccc
Confidence 369999999999999999999999999999999988777889999999999999999999999999987654
No 13
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=2.8e-21 Score=159.00 Aligned_cols=72 Identities=43% Similarity=0.762 Sum_probs=67.4
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||+++|||+++..++++++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~ 74 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV 74 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhcccccc
Confidence 479999999999999999999999999999999988777888999999999999999999999999887654
No 14
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=3e-21 Score=158.46 Aligned_cols=71 Identities=42% Similarity=0.756 Sum_probs=67.0
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
+|||+||||+++||.++||+|||+|+++||||+++..+.+.++|++|++||+||+||.+|..||.+|..++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~ 73 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF 73 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchh
Confidence 69999999999999999999999999999999988777888999999999999999999999999987544
No 15
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=3.2e-21 Score=159.24 Aligned_cols=72 Identities=53% Similarity=0.854 Sum_probs=67.4
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||++||||+++..+.++++|+.|++||+||+||.+|..||.+|..++
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~ 75 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAF 75 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccc
Confidence 369999999999999999999999999999999988777889999999999999999999999999887554
No 16
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=3.4e-21 Score=158.84 Aligned_cols=72 Identities=40% Similarity=0.708 Sum_probs=66.3
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.+|||+||||+++||.++||+|||+||++||||+++ .+.++++|+.|++||+||+||.+|..||.+|..+++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~ 74 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN 74 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCcccc
Confidence 479999999999999999999999999999999986 456889999999999999999999999999876543
No 17
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=4.4e-21 Score=158.63 Aligned_cols=72 Identities=49% Similarity=0.765 Sum_probs=66.8
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhc----cCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDF----TGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~----~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||++||||+++..+.++++|+.|++||+||+||.+|..||. +|..++
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~ 83 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGF 83 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccc
Confidence 479999999999999999999999999999999987777789999999999999999999999998 776544
No 18
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=3.8e-21 Score=158.43 Aligned_cols=73 Identities=49% Similarity=0.763 Sum_probs=67.1
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
+.+|||+||||+++|+.+|||+|||+||++||||+++. +.+.++|+.|++||+||+||.+|..||.+|..++.
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~ 75 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMD 75 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccc
Confidence 45799999999999999999999999999999999864 67899999999999999999999999999876543
No 19
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.84 E-value=5.9e-21 Score=152.48 Aligned_cols=70 Identities=47% Similarity=0.802 Sum_probs=65.3
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.+|||+||||+++||.++||+|||+||+++|||+++ .+.+.++|+.|++||+||+||.+|..||.+|..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 479999999999999999999999999999999976 5678899999999999999999999999988754
No 20
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=7.9e-21 Score=156.13 Aligned_cols=72 Identities=49% Similarity=0.853 Sum_probs=67.2
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.++||+|||+||+++|||+++..+.+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 74 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAF 74 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhcccccc
Confidence 479999999999999999999999999999999987777788999999999999999999999999886554
No 21
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=8.8e-21 Score=151.31 Aligned_cols=87 Identities=40% Similarity=0.605 Sum_probs=78.1
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccccccHHHH
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLREY 104 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~~~~~~~ 104 (139)
..|||+||||+.+++..+|++|||..+++|||||||++|.|.++|+.+.+||+||+|+..|..||..+..........+.
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~~d~ 83 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGREDQ 83 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhhhhH
Confidence 46999999999999999999999999999999999999999999999999999999999999999998777766555555
Q ss_pred HHHHhcc
Q 032521 105 LARFKGM 111 (139)
Q Consensus 105 ~~~~~~~ 111 (139)
+..|...
T Consensus 84 ~~~~r~~ 90 (296)
T KOG0691|consen 84 ADGFRKK 90 (296)
T ss_pred HHHHHHH
Confidence 5555554
No 22
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=2e-20 Score=154.79 Aligned_cols=104 Identities=34% Similarity=0.541 Sum_probs=82.2
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc----
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI---- 96 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~---- 96 (139)
....++||+||||..+++..+||++||+||++||||++|.. .++.++|+.|+.||+|||||..|.+||.....-+
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~~ 83 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGKN 83 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCCC
Confidence 45568999999999999999999999999999999997765 5799999999999999999999999998655333
Q ss_pred --ccccHHHHHHHHhcchhcccCCCCCCchhhh
Q 032521 97 --DKYTLREYLARFKGMILTCNGLGISHTSMWS 127 (139)
Q Consensus 97 --~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~ 127 (139)
......+.+..|.. ....|++....++|.
T Consensus 84 s~~~~~~~dlf~ff~~--~~y~gy~~~~~gfy~ 114 (508)
T KOG0717|consen 84 SDTGVQIEDLFQFFTS--SCYIGYENTSAGFYR 114 (508)
T ss_pred CccccchHHHHHHhhh--hhhcccccccchhHH
Confidence 23556666666554 344555555444443
No 23
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=9e-21 Score=156.11 Aligned_cols=72 Identities=43% Similarity=0.710 Sum_probs=66.1
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.+|||+||||+++|+.++||+|||+||++||||+++ .+.++++|++|++||+||+||.+|..||.+|..++.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~ 74 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPN 74 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccc
Confidence 469999999999999999999999999999999976 456889999999999999999999999999876543
No 24
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.1e-20 Score=156.31 Aligned_cols=70 Identities=50% Similarity=0.791 Sum_probs=66.3
Q ss_pred chhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 27 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 27 d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
|||+||||+++|++++||+|||+||++||||++++.+.+.++|+.|++||+||+||.+|..||++|..++
T Consensus 2 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 8999999999999999999999999999999998777899999999999999999999999999987543
No 25
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=1.1e-20 Score=155.74 Aligned_cols=72 Identities=53% Similarity=0.830 Sum_probs=66.0
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.+|||+||||+++|+.++||+|||+||++||||+++ .+.++++|+.|++||+||+||.+|..||.+|..+++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccc
Confidence 369999999999999999999999999999999976 466889999999999999999999999999876543
No 26
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=1e-20 Score=147.77 Aligned_cols=74 Identities=47% Similarity=0.718 Sum_probs=69.0
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
-...|+|+||||+++++.++||++||+|+++||||+++++|++..+|+.|+.||+||+||.+|..||.+|..++
T Consensus 28 ~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 28 VIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred cchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 34568999999999999999999999999999999999889999999999999999999999999999876554
No 27
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.1e-20 Score=156.53 Aligned_cols=72 Identities=46% Similarity=0.775 Sum_probs=67.2
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
+|||+||||+++|+.++||+|||+||+++|||+++..+.++++|+.|++||+||+||.+|..||.+|..++.
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~ 74 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVG 74 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhc
Confidence 699999999999999999999999999999999887777889999999999999999999999998876543
No 28
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.82 E-value=1.8e-20 Score=117.78 Aligned_cols=63 Identities=49% Similarity=0.890 Sum_probs=59.6
Q ss_pred chhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhCCchhhhhhh
Q 032521 27 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 27 d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
|||+||||+++++.++||++|+++++++|||+++... .+.+.|..|++||++|++|.+|..||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999977665 68899999999999999999999998
No 29
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.6e-20 Score=154.91 Aligned_cols=70 Identities=51% Similarity=0.799 Sum_probs=65.0
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
+|||+||||+++|+.++||+|||+||+++|||+++. +.+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~ 72 (382)
T PRK14291 3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF 72 (382)
T ss_pred CCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence 699999999999999999999999999999999864 6688999999999999999999999999886543
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=3.2e-20 Score=152.52 Aligned_cols=69 Identities=49% Similarity=0.827 Sum_probs=64.5
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.|||+||||+++++.++||+|||+|++++|||+++ .+.+.++|+.|++||+||+||.+|..||.+|..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 59999999999999999999999999999999976 5678899999999999999999999999988654
No 31
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.82 E-value=1.6e-20 Score=154.83 Aligned_cols=68 Identities=47% Similarity=0.718 Sum_probs=64.2
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY 94 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~ 94 (139)
+|||+||||+++|+.++||+|||+||++||||+++ .++++++|+.|++||+||+||.+|..||.+|..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 69999999999999999999999999999999986 567889999999999999999999999998863
No 32
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.8e-20 Score=152.80 Aligned_cols=72 Identities=49% Similarity=0.776 Sum_probs=67.4
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.+|||+||||+++|+.+|||+|||+||+++|||+++..+++.++|+.|++||+||+||.+|..||.+|..++
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~ 75 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccccc
Confidence 479999999999999999999999999999999998777899999999999999999999999999886543
No 33
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=5.3e-20 Score=146.88 Aligned_cols=72 Identities=44% Similarity=0.764 Sum_probs=65.9
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
+...|||+||||+++|+..|||+||++|++++|||.+... .+.++|++|.+||+||+|+++|..||..+..+
T Consensus 40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~-~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK-EASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc-chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 3344999999999999999999999999999999997654 89999999999999999999999999988754
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=6.2e-20 Score=150.62 Aligned_cols=71 Identities=55% Similarity=0.944 Sum_probs=65.9
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
+|||+||||+++|+.++||+|||+|++++|||+++... .+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~ 74 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF 74 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccc
Confidence 69999999999999999999999999999999987654 688999999999999999999999999887544
No 35
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.80 E-value=7.6e-20 Score=162.17 Aligned_cols=82 Identities=33% Similarity=0.449 Sum_probs=73.2
Q ss_pred ccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032521 19 SRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 19 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
+.......+||+||||+++|+..+||+|||+||+++|||+++.. .+..+|+.|.+||+||+||.+|..||.+|..++..
T Consensus 566 ~t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 566 PTIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred ccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 35566678999999999999999999999999999999998765 67889999999999999999999999999887765
Q ss_pred ccH
Q 032521 99 YTL 101 (139)
Q Consensus 99 ~~~ 101 (139)
..+
T Consensus 645 ~~~ 647 (1136)
T PTZ00341 645 VNF 647 (1136)
T ss_pred CCc
Confidence 443
No 36
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=1.3e-19 Score=139.26 Aligned_cols=95 Identities=38% Similarity=0.619 Sum_probs=76.7
Q ss_pred cccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032521 18 ESRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD--SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 18 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.|......+|+|+||||.++|+..+|++||+++++++|||+++.. .++.+.|++|+.||+||+|.++|..||..|...
T Consensus 6 ~~~~~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id 85 (264)
T KOG0719|consen 6 ECTGSFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID 85 (264)
T ss_pred hccccccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence 344455667999999999999999999999999999999998532 468899999999999999999999999998654
Q ss_pred c-ccccHHHHHHHHhcch
Q 032521 96 I-DKYTLREYLARFKGMI 112 (139)
Q Consensus 96 ~-~~~~~~~~~~~~~~~~ 112 (139)
. ...-..+|+.+|..++
T Consensus 86 d~~~d~~~~~~e~~~~iy 103 (264)
T KOG0719|consen 86 DESGDIDEDWLEFWRAIY 103 (264)
T ss_pred CccchhhhHHHHHHHHHH
Confidence 2 2233445555555543
No 37
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.79 E-value=1.2e-19 Score=148.25 Aligned_cols=69 Identities=55% Similarity=0.894 Sum_probs=64.2
Q ss_pred chhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 27 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 27 d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
|||+||||+++|+.++||+|||+||+++|||+++ .+.+.++|+.|++||+||+||.+|..||.+|..+.
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~ 69 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGF 69 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccc
Confidence 7999999999999999999999999999999986 55688999999999999999999999999887654
No 38
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.3e-19 Score=149.04 Aligned_cols=70 Identities=43% Similarity=0.675 Sum_probs=64.8
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
+|||+||||+++||.++||+|||++++++|||+++ .+.++++|+.|++||+||+|+.+|..||.+|..++
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 72 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAF 72 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccc
Confidence 69999999999999999999999999999999976 45678899999999999999999999999886544
No 39
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.3e-19 Score=150.28 Aligned_cols=76 Identities=43% Similarity=0.688 Sum_probs=69.2
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~---~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
..+..|||.+|+|+++||.+|||+|||++++.|||||..++ ..|++.|++|.+||+||+||.+|..||.+|..+++
T Consensus 5 e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred ccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 34456999999999999999999999999999999998644 35889999999999999999999999999998886
No 40
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.78 E-value=2.3e-19 Score=144.17 Aligned_cols=69 Identities=39% Similarity=0.672 Sum_probs=63.7
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
..+|||+||||+++++.++||+|||+||+++|||+++ .+.+.++|+.|++||++|+||.+|..||.++.
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~ 70 (306)
T PRK10266 2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ 70 (306)
T ss_pred CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence 3479999999999999999999999999999999965 45688999999999999999999999998764
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.7e-19 Score=146.47 Aligned_cols=70 Identities=44% Similarity=0.793 Sum_probs=64.7
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.|||+||||+++++.++||+|||+|++++|||+++ .+.++++|+.|++||+||+||.+|..||.+|..++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~ 72 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGV 72 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhcccccc
Confidence 69999999999999999999999999999999976 45688999999999999999999999999886543
No 42
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.76 E-value=2.3e-18 Score=106.62 Aligned_cols=58 Identities=59% Similarity=0.956 Sum_probs=53.9
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHHhCCch
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG-DSAVTAKFQEINEAYAVLSDPD 83 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~-~~~a~~~f~~i~~Ay~iL~dp~ 83 (139)
+|||+||||+++++.++||++|+++++++|||+++. .+.+.+.|+.|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999999999875 5678899999999999999985
No 43
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.74 E-value=7.9e-18 Score=102.34 Aligned_cols=55 Identities=64% Similarity=0.979 Sum_probs=51.3
Q ss_pred chhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCC
Q 032521 27 DYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 81 (139)
Q Consensus 27 d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~d 81 (139)
|||+||||++.++.++||++|+++++++|||+++....+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999976546688999999999999986
No 44
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.72 E-value=7.6e-18 Score=136.63 Aligned_cols=77 Identities=43% Similarity=0.699 Sum_probs=68.5
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
....+|||+||||.++++..||.+|||++|.+||||.+.... .|+++|.-|..|-+||+||++|+.|| .|.+.++.
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFD-nGeDPLD~ 468 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFD-NGEDPLDP 468 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhcc-CCCCCCCh
Confidence 566799999999999999999999999999999999987654 48899999999999999999999999 45556554
Q ss_pred c
Q 032521 99 Y 99 (139)
Q Consensus 99 ~ 99 (139)
.
T Consensus 469 E 469 (504)
T KOG0624|consen 469 E 469 (504)
T ss_pred h
Confidence 3
No 45
>PHA03102 Small T antigen; Reviewed
Probab=99.71 E-value=1.4e-17 Score=121.73 Aligned_cols=70 Identities=21% Similarity=0.266 Sum_probs=62.9
Q ss_pred ccchhhhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032521 25 FQDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 25 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
.+.+|+||||+++| |..+||+|||++++++|||++++ .++|+.|++||++|+|+.+|..||.+|......
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~ 75 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSE 75 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCccccc
Confidence 36899999999999 99999999999999999999542 479999999999999999999999998765443
No 46
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=3.1e-17 Score=124.87 Aligned_cols=74 Identities=31% Similarity=0.518 Sum_probs=67.0
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
...-|+|+||||+++++.+|||+|||+|++++||||++.....++.|..|.+||+.|+|+..|..|..+|....
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCC
Confidence 34469999999999999999999999999999999987667788899999999999999999999999885433
No 47
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.71 E-value=1.5e-17 Score=145.00 Aligned_cols=71 Identities=45% Similarity=0.786 Sum_probs=65.7
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
+|||+||||+++|+..+||+|||+|++++|||+++. +.+..+|+.|++||++|+||.+|..||.+|..+..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 699999999999999999999999999999999765 66788999999999999999999999998876654
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=3.2e-17 Score=122.22 Aligned_cols=69 Identities=52% Similarity=0.898 Sum_probs=64.6
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA-VTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~-a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
....++|+||||+++++..+|++|||++++++|||+++..+. +.+.|+.|++||+||+|+..|..||..
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 345799999999999999999999999999999999987774 899999999999999999999999975
No 49
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.63 E-value=7.2e-16 Score=114.82 Aligned_cols=66 Identities=27% Similarity=0.522 Sum_probs=58.3
Q ss_pred cchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032521 26 QDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 26 ~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
.|||+||||++. ++..+|+++||++++++|||+....+. +.+.+..|++||++|+||.+|..|+..
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 389999999995 788999999999999999999765532 566899999999999999999999863
No 50
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.62 E-value=1.2e-15 Score=113.80 Aligned_cols=69 Identities=23% Similarity=0.427 Sum_probs=61.0
Q ss_pred CCccchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032521 23 MEFQDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
|+..|||++|||++. ++..+|+++||++++++|||++.+.+. +.+.+..|++||+||+||.+|..|+..
T Consensus 1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~ 76 (173)
T PRK00294 1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLA 76 (173)
T ss_pred CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 456899999999986 678999999999999999999866543 556899999999999999999999963
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.61 E-value=1.6e-15 Score=112.54 Aligned_cols=66 Identities=27% Similarity=0.455 Sum_probs=57.3
Q ss_pred cchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032521 26 QDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 26 ~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~---a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
.|||+||||++. ++..+|+++||++++++|||++.+..+ +...+..|++||+||+||.+|..|+..
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 599999999986 789999999999999999999764322 334578999999999999999999764
No 52
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.60 E-value=2.9e-15 Score=112.02 Aligned_cols=65 Identities=25% Similarity=0.419 Sum_probs=57.6
Q ss_pred cchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHH-----HHHHHHHHHHHHhCCchhhhhhhc
Q 032521 26 QDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSAVT-----AKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 26 ~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~a~-----~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
.|||+||||++. ++..+|+++||++++++|||+++..+... +.+..|++||++|+||.+|..|..
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 699999999985 68999999999999999999987655443 346899999999999999999985
No 53
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=4.2e-15 Score=115.60 Aligned_cols=107 Identities=38% Similarity=0.510 Sum_probs=78.9
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhccCccccccccHHH
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTLRE 103 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~~~~~~ 103 (139)
..|+|.||+|.+.++..+|++||+++++++|||+++.. ..+.++|++|.+||++|+|+.+|..||.++......
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~----- 76 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKG----- 76 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCcccccc-----
Confidence 46999999999999999999999999999999997655 245558999999999999999999999999744443
Q ss_pred HHHHHhcchh--cccCCCCCCchhhhhhhccCCCCc
Q 032521 104 YLARFKGMIL--TCNGLGISHTSMWSQQLTETDDFA 137 (139)
Q Consensus 104 ~~~~~~~~~~--~~~g~g~~~~~~~~~~~~~~~~f~ 137 (139)
...+...+. .....-..+...|..+|+..++|.
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 111 (306)
T KOG0714|consen 77 -GGSFSSSFTSELFYFLFRKPDKDFYEFFGVSSPFS 111 (306)
T ss_pred -CCCCCCCCCCCcceeccCchhhhHHHHhCCCCCCc
Confidence 000000000 001223344567888888777765
No 54
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=4.1e-15 Score=122.55 Aligned_cols=70 Identities=47% Similarity=0.806 Sum_probs=65.2
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
..+++|||.||||...++..+||+|||++++.+|||++... .+++.+|+.|.+||.||+||.+|..||..
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 56678999999999999999999999999999999998766 67899999999999999999999999963
No 55
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=6.5e-15 Score=122.22 Aligned_cols=69 Identities=32% Similarity=0.511 Sum_probs=64.8
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
+.+|+|.+|||+.+++.++||+.||++|...|||||. .+.|++.|+.++.||++|+|+.+|..||....
T Consensus 233 ~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 233 NILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred cCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 3689999999999999999999999999999999987 78899999999999999999999999997543
No 56
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=7.9e-15 Score=114.40 Aligned_cols=69 Identities=30% Similarity=0.541 Sum_probs=62.5
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
..+|+|+||||.++++..+|.+|||+||+++|||++.+. ++.+.|+.|..||++|.|.+.|..||-...
T Consensus 31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~-e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP-ESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc-hhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 458999999999999999999999999999999998654 456899999999999999999999996543
No 57
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.49 E-value=5.6e-14 Score=98.33 Aligned_cols=55 Identities=35% Similarity=0.463 Sum_probs=49.3
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhC
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 80 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~ 80 (139)
.|..+++|+||||+++++.++||++||++++++|||+.+ . .+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 566789999999999999999999999999999999843 2 468899999999985
No 58
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.46 E-value=1e-13 Score=109.69 Aligned_cols=60 Identities=35% Similarity=0.541 Sum_probs=53.3
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-------hhHHHHHHHHHHHHHHhCC
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-------SAVTAKFQEINEAYAVLSD 81 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-------~~a~~~f~~i~~Ay~iL~d 81 (139)
.+...++|+||||++++|.++||++||+|++++|||+..+. +.+.++|+.|++||++|+.
T Consensus 196 ~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 196 GPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred CCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999996432 2478899999999999974
No 59
>PHA02624 large T antigen; Provisional
Probab=99.45 E-value=1.5e-13 Score=118.53 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=65.6
Q ss_pred ccchhhhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhh--hcc---Cccccc
Q 032521 25 FQDYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDY--DFT---GIYEID 97 (139)
Q Consensus 25 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~Y--D~~---g~~~~~ 97 (139)
.+++|+||||++++ +..+||+|||++++++|||+.+ +.++|++|++||++|+|+.+|..| |.. +.....
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG----deekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v~~~~ 85 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG----DEEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYG 85 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC----cHHHHHHHHHHHHHHhcHHHhhhcccccccccCCCCCc
Confidence 46999999999999 9999999999999999999953 257999999999999999999999 432 111223
Q ss_pred cccHHHHHHHHhc
Q 032521 98 KYTLREYLARFKG 110 (139)
Q Consensus 98 ~~~~~~~~~~~~~ 110 (139)
....++|+..|+.
T Consensus 86 ~~~w~~ww~~f~~ 98 (647)
T PHA02624 86 TPEWEQWWEEFNE 98 (647)
T ss_pred cccHHHHHHHhhh
Confidence 4455666666653
No 60
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=1.9e-12 Score=96.65 Aligned_cols=65 Identities=25% Similarity=0.390 Sum_probs=57.6
Q ss_pred cchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhc
Q 032521 26 QDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 26 ~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
.|||++|||++. .+...+++.|+.+.+++|||+....+. +.+.-..||+||.+|+||.+|..|=.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 699999999985 899999999999999999999876653 44567799999999999999999965
No 61
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.23 E-value=8.6e-12 Score=103.95 Aligned_cols=72 Identities=35% Similarity=0.582 Sum_probs=64.1
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032521 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNG-----DSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~-----~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
..-|+|+|||++.+++..+||++||+|+.++||||.+. .++.++.++.|++||..|+|...|+.|-.+|...
T Consensus 96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd 172 (610)
T COG5407 96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPD 172 (610)
T ss_pred cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCC
Confidence 34599999999999999999999999999999999654 2367889999999999999999999999887543
No 62
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.21 E-value=3.2e-11 Score=88.74 Aligned_cols=56 Identities=30% Similarity=0.530 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHHhCCchhhhhhhccC
Q 032521 37 DATDEKIRLNYRKLALKWHPDKHNGDS-----AVTAKFQEINEAYAVLSDPDKRLDYDFTG 92 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~HPDk~~~~~-----~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g 92 (139)
..+..+|+++||++++++|||+++..+ .+...+..|++||++|+||.+|..|+...
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l 62 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSL 62 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 357899999999999999999975543 25678999999999999999999998754
No 63
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=2.6e-11 Score=95.72 Aligned_cols=94 Identities=28% Similarity=0.378 Sum_probs=75.0
Q ss_pred cCCCCccchhhhccCCC---CCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHHhCCchhhhhhhccCc-
Q 032521 20 RSNMEFQDYYKILEVDY---DATDEKIRLNYRKLALKWHPDKHN--GDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI- 93 (139)
Q Consensus 20 ~~~~~~~d~Y~iLgv~~---~as~~eIk~ayr~la~~~HPDk~~--~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~- 93 (139)
...++..|+|.+|||+. .+++.+|.++.++.+.+||||+.. ++-.....|+.|+.||+||+|+.+|..||....
T Consensus 37 ~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~ 116 (379)
T COG5269 37 FKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFD 116 (379)
T ss_pred hhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccc
Confidence 45677899999999975 689999999999999999999962 233567899999999999999999999997432
Q ss_pred ---cccccccHHHHHHHHhcchh
Q 032521 94 ---YEIDKYTLREYLARFKGMIL 113 (139)
Q Consensus 94 ---~~~~~~~~~~~~~~~~~~~~ 113 (139)
......+..+|++.+..+|-
T Consensus 117 advppp~~~t~~~Ffe~w~pvFe 139 (379)
T COG5269 117 ADVPPPRIYTPDEFFEVWEPVFE 139 (379)
T ss_pred cCCCCccCCCchhHHHHHHHHHH
Confidence 22345667777776665543
No 64
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=4.2e-11 Score=90.74 Aligned_cols=81 Identities=28% Similarity=0.442 Sum_probs=68.9
Q ss_pred chHHHhhcccccccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhh
Q 032521 7 NTQKEKMGASRESRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKR 85 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R 85 (139)
++.+.++.+...+.+..=.-|+|+||.|.|..+.++||+.||+|++..|||+|+.+ +.|...|--|.+||.+|-|+..|
T Consensus 34 Lts~~qIeRllrpgstyfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~r 113 (250)
T KOG1150|consen 34 LTSKQQIERLLRPGSTYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIR 113 (250)
T ss_pred cCcHHHHHHHhcCCccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 44555566666656666668999999999999999999999999999999999988 67889999999999999998755
Q ss_pred hh
Q 032521 86 LD 87 (139)
Q Consensus 86 ~~ 87 (139)
..
T Consensus 114 kr 115 (250)
T KOG1150|consen 114 KR 115 (250)
T ss_pred HH
Confidence 43
No 65
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=1.8e-10 Score=89.32 Aligned_cols=107 Identities=21% Similarity=0.386 Sum_probs=76.2
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-HhCCchhhhhhhccCcccccccc
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYA-VLSDPDKRLDYDFTGIYEIDKYT 100 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~-iL~dp~~R~~YD~~g~~~~~~~~ 100 (139)
+-+...+|.||||..+|+.++++.||.+|++++|||. +......++|.+|.+||. ||+..-.+ -+.....+.+..+
T Consensus 43 ke~~~e~fril~v~e~~~adevr~af~~lakq~hpds-gs~~adaa~f~qideafrkvlq~~~~k--tn~~qn~~edee~ 119 (342)
T KOG0568|consen 43 KEKIMECFRILGVEEGADADEVREAFHDLAKQVHPDS-GSEEADAARFIQIDEAFRKVLQEKFAK--TNARQNIGEDEED 119 (342)
T ss_pred HHHHHHHHHHhcccccCchhHHHHHHHHHHHHcCCCC-CCccccHHHHHHHHHHHHHHHHHHHHH--hhhccccccchhh
Confidence 3345689999999999999999999999999999998 455667789999999998 77632221 1111122222233
Q ss_pred HHHH-----HHHHhcchhcccCCCCCCchhhhhhhcc
Q 032521 101 LREY-----LARFKGMILTCNGLGISHTSMWSQQLTE 132 (139)
Q Consensus 101 ~~~~-----~~~~~~~~~~~~g~g~~~~~~~~~~~~~ 132 (139)
.++| .++.+.. +++.|.|++...+.+.+|+.
T Consensus 120 ~~efdik~kapqhrhy-ls~egig~gtp~qrekhyqq 155 (342)
T KOG0568|consen 120 AEEFDIKHKAPQHRHY-LSFEGIGFGTPFQREKHYQQ 155 (342)
T ss_pred HHHhhhccCCchhhhh-hcccCcccCCchHHHHHHHH
Confidence 3333 3444543 78899999998888877753
No 66
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=9.9e-08 Score=86.65 Aligned_cols=58 Identities=40% Similarity=0.573 Sum_probs=49.5
Q ss_pred cCCCCccchhhhccCCC----CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhC
Q 032521 20 RSNMEFQDYYKILEVDY----DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 80 (139)
Q Consensus 20 ~~~~~~~d~Y~iLgv~~----~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~ 80 (139)
+..|...+.|+||.|+- .-.++.||++|++||.+||||||| +..++|.++++||+.|.
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 44677789999999974 335689999999999999999976 45689999999999997
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.51 E-value=2.7e-07 Score=63.44 Aligned_cols=57 Identities=28% Similarity=0.336 Sum_probs=49.0
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCc
Q 032521 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDP 82 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp 82 (139)
.|.+++.-.||||+++++.+.||.|+|++....|||+.+ .| -.-.+|++|+++|...
T Consensus 52 kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SP---YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 52 KMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SP---YLASKINEAKDLLEGT 108 (112)
T ss_pred ccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CH---HHHHHHHHHHHHHhcc
Confidence 567778889999999999999999999999999999955 33 4555799999999754
No 68
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=5.9e-05 Score=55.32 Aligned_cols=68 Identities=24% Similarity=0.481 Sum_probs=55.2
Q ss_pred CCccchhhhccCC--CCCCHHHHHHHHHHHHHHhCCCCCCCC-----hhHHHHHHHHHHHHHHhCCchhhhhhhc
Q 032521 23 MEFQDYYKILEVD--YDATDEKIRLNYRKLALKWHPDKHNGD-----SAVTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 23 ~~~~d~Y~iLgv~--~~as~~eIk~ayr~la~~~HPDk~~~~-----~~a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
....+||.++|.. ....+..++.-|....+++|||+.... ..+.+.-..|++||.+|.||-+|..|=.
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3447999999764 456778888899999999999984322 1467788999999999999999999965
No 69
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=97.53 E-value=0.00011 Score=62.51 Aligned_cols=45 Identities=24% Similarity=0.265 Sum_probs=34.5
Q ss_pred ccCCCCccchhhhcc----------------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCh
Q 032521 19 SRSNMEFQDYYKILE----------------VDYDATDEKIRLNYRKLALKWHPDKHNGDS 63 (139)
Q Consensus 19 ~~~~~~~~d~Y~iLg----------------v~~~as~~eIk~ayr~la~~~HPDk~~~~~ 63 (139)
.|+..+..|...||. +..-+++++||++|||.++..||||.+..+
T Consensus 365 ~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~g 425 (453)
T KOG0431|consen 365 RWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKG 425 (453)
T ss_pred HhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCc
Confidence 345555666666654 345689999999999999999999987664
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.00038 Score=51.84 Aligned_cols=54 Identities=39% Similarity=0.603 Sum_probs=46.2
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHHh
Q 032521 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-------AVTAKFQEINEAYAVL 79 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-------~a~~~f~~i~~Ay~iL 79 (139)
.+.|.+|++....+..+|+++|+++....|||+-.... .+.++++.|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999999999999843221 4677888899998754
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.77 E-value=0.0013 Score=49.01 Aligned_cols=69 Identities=25% Similarity=0.413 Sum_probs=53.3
Q ss_pred hhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032521 28 YYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 28 ~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
+..++|.++. ...+.++..|+.+.+.+|||+....+. +.+.+..++.||.+|.+|..|..|=..-..+.
T Consensus 3 ~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g~ 78 (174)
T COG1076 3 GFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADGL 78 (174)
T ss_pred cccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcccc
Confidence 4445555543 356789999999999999999765543 34578899999999999999999987655444
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=96.41 E-value=0.008 Score=42.84 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=40.2
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCC
Q 032521 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSD 81 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~d 81 (139)
..|...+-..||||++..+.++|.+.|.+|....+|++.++ .-.-.+|..|.+.|..
T Consensus 53 ~~Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~ 109 (127)
T PF03656_consen 53 KGMTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQ 109 (127)
T ss_dssp ----HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHH
Confidence 36788899999999999999999999999999999998542 3455678888888753
No 73
>PF13446 RPT: A repeated domain in UCH-protein
Probab=91.05 E-value=0.6 Score=28.61 Aligned_cols=30 Identities=27% Similarity=0.455 Sum_probs=27.0
Q ss_pred CCccchhhhccCCCCCCHHHHHHHHHHHHH
Q 032521 23 MEFQDYYKILEVDYDATDEKIRLNYRKLAL 52 (139)
Q Consensus 23 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~ 52 (139)
|...+.|++|||+++.+.+.|-.+|+....
T Consensus 2 ~~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 2 MDVEEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred CCHHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 455688999999999999999999999877
No 74
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=90.52 E-value=0.81 Score=31.82 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChh----HHHHHHHHHHHHHHhCCch
Q 032521 36 YDATDEKIRLNYRKLALKWHPDKHNGDSA----VTAKFQEINEAYAVLSDPD 83 (139)
Q Consensus 36 ~~as~~eIk~ayr~la~~~HPDk~~~~~~----a~~~f~~i~~Ay~iL~dp~ 83 (139)
+..+..+++.|-|..-++.|||.....|+ .++-++.++.--+.|..+.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 34577899999999999999998776663 3456778887777777654
No 75
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=89.35 E-value=0.46 Score=38.51 Aligned_cols=54 Identities=35% Similarity=0.543 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----ChhHHHHHHHHHHHHHHhCCchhhhhhhc
Q 032521 37 DATDEKIRLNYRKLALKWHPDKHNG----DSAVTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~HPDk~~~----~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
.++..+|+.+|+..++..||++... .....+.++.|.+||+||.+.++|...|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 3577899999999999999998531 12356779999999999998666555554
No 76
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=89.04 E-value=0.97 Score=34.38 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhC
Q 032521 35 DYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 80 (139)
Q Consensus 35 ~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~ 80 (139)
+++|+.+||.+|+.++..+|--|. +.-.+|..||+.|.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~--------~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE--------KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH--------HHHHHHHHHHHHHH
Confidence 478999999999999999994432 56677999998753
No 77
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=77.80 E-value=11 Score=24.43 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=30.6
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHN 60 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~ 60 (139)
|++.-+++|+.+.+++.||+.|-++.+++..--..|
T Consensus 2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCc
Confidence 567778999999999999999999999888665544
No 78
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.09 E-value=15 Score=26.13 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=35.2
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 032521 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHN 60 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~ 60 (139)
..+....--.||+|++..+.++|.+.|..|-....+.+.+
T Consensus 54 ~~iTlqEa~qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 54 GKITLQEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred ccccHHHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 3577788899999999999999999999999998888754
No 79
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=50.01 E-value=15 Score=15.83 Aligned_cols=13 Identities=46% Similarity=0.841 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhC
Q 032521 68 KFQEINEAYAVLS 80 (139)
Q Consensus 68 ~f~~i~~Ay~iL~ 80 (139)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4667777877663
No 80
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=42.91 E-value=20 Score=31.13 Aligned_cols=44 Identities=20% Similarity=0.198 Sum_probs=34.2
Q ss_pred HHhhcccccccCCCCccchhhhccC-----------CCCCCHHHHHHHHHHHHHH
Q 032521 10 KEKMGASRESRSNMEFQDYYKILEV-----------DYDATDEKIRLNYRKLALK 53 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~d~Y~iLgv-----------~~~as~~eIk~ayr~la~~ 53 (139)
|..+...++..+....+--|+++|. ++..+++|||+-|+++.+.
T Consensus 55 F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~gwEl~~r~~tpeEIreE~Erl~r~ 109 (546)
T KOG0718|consen 55 FQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEGWELGFRGKTPEEIREEYERLQRE 109 (546)
T ss_pred HHHHHHHHHHhcChHHHHHHHHhhhccccccCceeecCCCCHHHHHHHHHHHHHH
Confidence 3445566777788888888888874 4688999999999988654
No 81
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=42.34 E-value=95 Score=20.19 Aligned_cols=46 Identities=20% Similarity=0.167 Sum_probs=34.3
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 032521 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQE 71 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~ 71 (139)
|++--.+.|+.|.++.+||..|-.+.+++..--..++. ...+.|.+
T Consensus 2 CRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~-an~eaF~~ 47 (78)
T PF10041_consen 2 CRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSA-ANAEAFDR 47 (78)
T ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcch-hhHHHHHH
Confidence 45666777899999999999999999999977654433 23344543
No 82
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=41.93 E-value=35 Score=17.76 Aligned_cols=18 Identities=33% Similarity=0.545 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 032521 39 TDEKIRLNYRKLALKWHP 56 (139)
Q Consensus 39 s~~eIk~ayr~la~~~HP 56 (139)
..++.|.+-|+.|+.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 347888899999999983
No 83
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=29.24 E-value=1.3e+02 Score=18.40 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032521 45 LNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 45 ~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
+..|...+.-||+.. ..+..+.|.+.|..|++.++...++
T Consensus 14 ~~~r~~~~~~~p~~~-----~~eisk~l~~~Wk~ls~~eK~~y~~ 53 (72)
T cd01388 14 KRHRRKVLQEYPLKE-----NRAISKILGDRWKALSNEEKQPYYE 53 (72)
T ss_pred HHHHHHHHHHCCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 445666677799852 2477888999999999877665554
No 84
>KOG0527 consensus HMG-box transcription factor [Transcription]
Probab=26.96 E-value=84 Score=25.94 Aligned_cols=41 Identities=24% Similarity=0.305 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhc
Q 032521 45 LNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 45 ~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
+..|+...+-.||.++ .++-++|-.-|..|++.+||-.+|.
T Consensus 75 q~~RRkma~qnP~mHN-----SEISK~LG~~WK~Lse~EKrPFi~E 115 (331)
T KOG0527|consen 75 QGQRRKLAKQNPKMHN-----SEISKRLGAEWKLLSEEEKRPFVDE 115 (331)
T ss_pred HHHHHHHHHhCcchhh-----HHHHHHHHHHHhhcCHhhhccHHHH
Confidence 3556665666688853 4899999999999999999998885
No 85
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=24.64 E-value=20 Score=22.15 Aligned_cols=29 Identities=24% Similarity=0.596 Sum_probs=19.4
Q ss_pred cchhhhccCCCCCCHHHH-HHHHHHHHHHhCCCC
Q 032521 26 QDYYKILEVDYDATDEKI-RLNYRKLALKWHPDK 58 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eI-k~ayr~la~~~HPDk 58 (139)
..++++||+++ +++ ...........|||=
T Consensus 6 ~~~~~i~G~~~----~~~~~~~~~~~~~~ihpdD 35 (91)
T PF08447_consen 6 DNFYEIFGYSP----EEIGKPDFEEWLERIHPDD 35 (91)
T ss_dssp THHHHHHTS-H----HHHTCBEHHHHHHHB-TTT
T ss_pred HHHHHHhCCCH----HHhccCCHHHHHhhcCHHH
Confidence 57889998765 455 555666778889985
No 86
>KOG2320 consensus RAS effector RIN1 (contains VPS domain) [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.79 E-value=1.2e+02 Score=27.19 Aligned_cols=27 Identities=19% Similarity=0.433 Sum_probs=22.3
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHhCCCC
Q 032521 32 LEVDYDATDEKIRLNYRKLALKWHPDK 58 (139)
Q Consensus 32 Lgv~~~as~~eIk~ayr~la~~~HPDk 58 (139)
|-++..+.-++||.+++++.+.|||.+
T Consensus 395 ~~~Ps~~~mEqvk~k~~~m~r~YSP~k 421 (651)
T KOG2320|consen 395 LSTPSDVLMEQVKQKFTAMQRRYSPSK 421 (651)
T ss_pred ccCCcHHHHHHHHHHHHHHHHhhChHH
Confidence 344556778899999999999999975
No 87
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=23.77 E-value=1.6e+02 Score=16.95 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032521 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.++...+.-||+.. ..+..+.|...|..|++.++....+
T Consensus 12 ~~~~~~~~~~~~~~~~-----~~~i~~~~~~~W~~l~~~~k~~y~~ 52 (66)
T cd00084 12 SQEHRAEVKAENPGLS-----VGEISKILGEMWKSLSEEEKKKYEE 52 (66)
T ss_pred HHHHHHHHHHHCcCCC-----HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4556677778888842 3467888999999998766555444
No 88
>COG3755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.56 E-value=1.5e+02 Score=21.12 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHHHHHhC-CCCCCCChhHHHHHHHHHHHHHHhCCchhhhhh
Q 032521 37 DATDEKIRLNYRKLALKWH-PDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDY 88 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~H-PDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~Y 88 (139)
..-..++.+||..+.+..+ |++ ....++-+.||-...|-..-..+
T Consensus 47 ~~aDa~LN~AY~~ll~~l~~~~~-------~~aL~kaQRAWi~fRDadC~~~~ 92 (127)
T COG3755 47 QAADAELNKAYKALLKRLQDSPR-------TKALQKAQRAWIAFRDADCALIK 92 (127)
T ss_pred HHHHHHHHHHHHHHHHHhccChH-------HHHHHHHHHHHHHHhhHhHHHHh
Confidence 3455789999999998887 554 12588889999988887776655
No 89
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 333 and 377 amino acids in length and contain a conserved HEXXH sequence motif that is characteristic of metallopeptidases. This family may therefore belong to an as yet uncharacterised family of peptidase enzymes.
Probab=22.90 E-value=2.3e+02 Score=23.08 Aligned_cols=62 Identities=18% Similarity=0.131 Sum_probs=41.8
Q ss_pred CCCccchhhhccCCC-CCCHHHHHHHHHHHHHHh-------CCCCCCC---ChhHHHHHHHHHHHHHHhCCch
Q 032521 22 NMEFQDYYKILEVDY-DATDEKIRLNYRKLALKW-------HPDKHNG---DSAVTAKFQEINEAYAVLSDPD 83 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~-~as~~eIk~ayr~la~~~-------HPDk~~~---~~~a~~~f~~i~~Ay~iL~dp~ 83 (139)
+--+.++++-||++. ..+.+|+.+-.+.++.+. ++|.... ...-.+.++.+.+||+.|.+.-
T Consensus 78 NY~R~pl~~~l~l~~~~~~~~eL~~l~~~li~~~N~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~y~~l~~~~ 150 (318)
T PF12725_consen 78 NYYRPPLSERLGLETEEYSTEELKELTEYLIEKANELREQITEDDNGVVDIPYDKEEIFEEAREGYENLAERY 150 (318)
T ss_pred hcCCcCHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHHHHHHHHHhC
Confidence 444568889999987 789999888777664433 3332111 0134678999999999987543
No 90
>COG0089 RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis]
Probab=21.87 E-value=75 Score=21.41 Aligned_cols=21 Identities=33% Similarity=0.407 Sum_probs=18.3
Q ss_pred hccCCCCCCHHHHHHHHHHHH
Q 032521 31 ILEVDYDATDEKIRLNYRKLA 51 (139)
Q Consensus 31 iLgv~~~as~~eIk~ayr~la 51 (139)
++-|.+.|+..+||+|...+-
T Consensus 25 vF~V~~~AtK~~IK~AvE~lF 45 (94)
T COG0089 25 VFIVDPDATKPEIKAAVEELF 45 (94)
T ss_pred EEEECCCCCHHHHHHHHHHHh
Confidence 577899999999999988874
No 91
>PF15178 TOM_sub5: Mitochondrial import receptor subunit TOM5 homolog
Probab=21.16 E-value=1.7e+02 Score=17.26 Aligned_cols=24 Identities=13% Similarity=0.270 Sum_probs=18.6
Q ss_pred hhhccCCCCCCHHHHHHHHHHHHH
Q 032521 29 YKILEVDYDATDEKIRLNYRKLAL 52 (139)
Q Consensus 29 Y~iLgv~~~as~~eIk~ayr~la~ 52 (139)
+.+=|+.|..+++|.|+.-|.-+.
T Consensus 2 ~~~egl~pk~DPeE~k~kmR~dvi 25 (51)
T PF15178_consen 2 FRIEGLGPKMDPEEMKRKMREDVI 25 (51)
T ss_pred cccccCCCCCCHHHHHHHHHHHHH
Confidence 345688899999999998876543
No 92
>PF14706 Tnp_DNA_bind: Transposase DNA-binding; PDB: 3ECP_A 4DM0_A 1MUS_A 1MUH_A 1MM8_A.
Probab=21.04 E-value=1.4e+02 Score=18.13 Aligned_cols=41 Identities=20% Similarity=0.306 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHH--HhCCCCCCCChhHHHHHHHHHHHHHHhCCch
Q 032521 41 EKIRLNYRKLAL--KWHPDKHNGDSAVTAKFQEINEAYAVLSDPD 83 (139)
Q Consensus 41 ~eIk~ayr~la~--~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~ 83 (139)
+.+.+...+++. .-||.. +-|.+-.-...+.-||..|.+|.
T Consensus 15 ~Rl~~Rl~~l~~~la~~p~~--Sip~a~~~wa~tkaAYRF~~N~~ 57 (58)
T PF14706_consen 15 KRLTRRLVKLAESLAEKPGA--SIPQACQDWAETKAAYRFFRNPR 57 (58)
T ss_dssp HHHHHHHHHHHHHHHHTTTS---HHHHTT-HHHHHHHHHHHT-TT
T ss_pred chHHHHHHHHHHHHHHCCCC--ccchhccCHHHHHHHHHhhcCCC
Confidence 456667777755 456653 33556667778899999998763
No 93
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=20.84 E-value=74 Score=18.35 Aligned_cols=23 Identities=17% Similarity=0.255 Sum_probs=18.2
Q ss_pred hccCCCCCCHHHHHHHHHHHHHH
Q 032521 31 ILEVDYDATDEKIRLNYRKLALK 53 (139)
Q Consensus 31 iLgv~~~as~~eIk~ayr~la~~ 53 (139)
|=||+++++.++|++.+......
T Consensus 3 v~nlp~~~t~~~l~~~f~~~g~i 25 (70)
T PF00076_consen 3 VGNLPPDVTEEELRDFFSQFGKI 25 (70)
T ss_dssp EESETTTSSHHHHHHHHHTTSTE
T ss_pred EcCCCCcCCHHHHHHHHHHhhhc
Confidence 34789999999999998876444
No 94
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=20.09 E-value=2.3e+02 Score=17.46 Aligned_cols=41 Identities=12% Similarity=-0.035 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032521 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.++..++.-+|+.. ..+..+.|.+.|..|++.++....+
T Consensus 13 ~~~~r~~~~~~~p~~~-----~~eisk~~g~~Wk~ls~eeK~~y~~ 53 (77)
T cd01389 13 RQDKHAQLKTENPGLT-----NNEISRIIGRMWRSESPEVKAYYKE 53 (77)
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 4566777888899862 3477888999999998765554444
Done!