Query 032526
Match_columns 139
No_of_seqs 105 out of 143
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 03:27:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032526.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032526hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1htaa_ a.22.1.2 (A:) Archaeal 97.9 3.9E-05 2.9E-09 48.9 8.3 66 34-114 3-68 (68)
2 d2huec1 a.22.1.1 (C:20-101) Hi 97.3 0.0002 1.5E-08 47.9 5.7 67 34-115 9-75 (82)
3 d1ku5a_ a.22.1.2 (A:) Archaeal 97.3 0.00073 5.3E-08 42.7 7.7 63 35-112 3-65 (66)
4 d1tafb_ a.22.1.3 (B:) TAF(II)6 96.6 0.0064 4.7E-07 40.1 8.1 67 31-112 3-69 (70)
5 d1n1ja_ a.22.1.3 (A:) Nuclear 96.4 0.0088 6.4E-07 39.4 8.1 68 34-116 2-71 (87)
6 d1f1ea_ a.22.1.2 (A:) Archaeal 96.3 0.0093 6.8E-07 43.1 8.2 66 32-112 77-142 (151)
7 d2bykb1 a.22.1.3 (B:11-99) Chr 96.0 0.0062 4.5E-07 40.4 5.3 46 56-116 23-68 (89)
8 d1h3ob_ a.22.1.3 (B:) TAF(II)- 95.7 0.054 3.9E-06 35.6 9.1 68 18-118 6-74 (74)
9 d1jfib_ a.22.1.3 (B:) Negative 95.6 0.015 1.1E-06 41.3 6.5 65 34-116 4-72 (135)
10 d1n1jb_ a.22.1.3 (B:) Nuclear 95.1 0.015 1.1E-06 37.3 4.7 65 35-114 1-66 (78)
11 d1tafa_ a.22.1.3 (A:) TAF(II)4 94.1 0.16 1.2E-05 32.8 7.9 60 38-112 5-64 (68)
12 d1jfia_ a.22.1.3 (A:) Negative 93.8 0.027 2E-06 35.2 3.5 62 35-111 3-65 (66)
13 d2byka1 a.22.1.3 (A:29-100) Ch 93.2 0.1 7.4E-06 33.3 5.6 44 57-114 15-58 (72)
14 d1f1ea_ a.22.1.2 (A:) Archaeal 88.7 1.4 0.0001 31.0 8.7 67 35-116 2-69 (151)
15 d1lv7a_ c.37.1.20 (A:) AAA dom 46.8 13 0.00093 27.3 4.8 58 39-113 190-251 (256)
16 d1n1fa_ a.26.1.3 (A:) Interleu 46.3 8.7 0.00064 27.2 3.6 31 38-69 59-92 (156)
17 d1zrja1 a.140.2.1 (A:1-37) Het 45.4 6.2 0.00045 22.1 2.1 19 101-119 5-23 (37)
18 d1b4aa1 a.4.5.3 (A:4-78) Argin 45.1 5.7 0.00041 25.2 2.2 19 101-119 16-34 (75)
19 d1kama_ c.26.1.3 (A:) Nicotina 44.6 14 0.001 23.4 4.2 33 16-49 154-186 (189)
20 d1k4ma_ c.26.1.3 (A:) Nicotina 43.6 13 0.00093 24.1 3.9 31 16-46 179-209 (213)
21 d2odgc1 a.140.1.1 (C:2-47) Inn 43.0 6.6 0.00048 23.3 2.1 19 99-117 3-21 (46)
22 d1q9ca_ a.22.1.3 (A:) Histone 42.8 46 0.0033 23.8 7.3 64 34-112 99-162 (172)
23 d1h1js_ a.140.2.1 (S:) S/mar D 41.3 7.9 0.00057 22.3 2.2 20 100-119 6-25 (44)
24 d1e32a2 c.37.1.20 (A:201-458) 38.6 16 0.0011 26.3 4.1 16 98-113 243-258 (258)
25 d2p5ka1 a.4.5.3 (A:2-64) Argin 38.2 8.7 0.00063 23.5 2.2 19 101-119 18-36 (63)
26 d1od6a_ c.26.1.3 (A:) Phosphop 37.4 20 0.0015 22.5 4.1 33 16-48 127-159 (160)
27 d1jeqa1 a.140.2.1 (A:559-609) 36.0 10 0.00076 22.3 2.2 20 100-119 16-35 (51)
28 d1bwda_ d.126.1.2 (A:) L-argin 34.7 8.7 0.00064 27.7 2.0 18 106-123 67-84 (348)
29 d1f7ca_ a.116.1.1 (A:) Graf {C 33.9 19 0.0014 24.5 3.7 40 18-59 68-107 (191)
30 d1jdwa_ d.126.1.2 (A:) L-argin 33.6 9.4 0.00069 27.1 2.0 20 103-122 63-82 (360)
31 d2outa1 a.140.3.2 (A:94-131) U 33.4 11 0.00077 21.2 1.8 18 104-121 1-18 (38)
32 d2mysb_ a.39.1.5 (B:) Myosin E 33.3 53 0.0038 20.7 6.5 25 96-120 88-112 (145)
33 d1xa6a1 a.116.1.1 (A:271-466) 32.4 14 0.001 25.2 2.8 42 19-62 78-119 (196)
34 d1tfua_ c.26.1.3 (A:) Phosphop 31.4 17 0.0012 22.8 2.9 32 15-46 124-155 (157)
35 d2ieaa3 c.48.1.1 (A:701-886) P 30.7 13 0.00096 26.5 2.4 22 101-122 161-182 (186)
36 d3cjsb1 d.47.1.1 (B:1-70) Ribo 30.2 8.3 0.0006 24.4 1.1 13 107-119 23-35 (70)
37 d2pq3a1 a.39.1.5 (A:3-75) Calm 29.8 13 0.00095 21.8 1.9 24 96-119 19-42 (73)
38 d1zela1 a.4.5.83 (A:1-82) Hypo 28.8 11 0.00081 24.2 1.5 22 95-116 23-44 (82)
39 d2db7a1 a.273.1.1 (A:3-57) Hai 28.7 32 0.0023 20.7 3.6 25 38-62 23-47 (55)
40 d1f54a_ a.39.1.5 (A:) Calmodul 28.7 22 0.0016 20.7 2.9 24 97-120 22-45 (77)
41 d1qjca_ c.26.1.3 (A:) Phosphop 26.2 24 0.0017 21.9 2.9 32 15-46 124-155 (157)
42 d2fnaa1 a.4.5.11 (A:284-356) H 26.2 8.9 0.00065 24.4 0.7 22 13-34 33-54 (73)
43 d1ej2a_ c.26.1.3 (A:) Nicotina 25.9 25 0.0018 22.6 3.0 34 15-48 126-159 (167)
44 d1zpva1 d.58.18.7 (A:1-83) UPF 25.1 16 0.0012 22.0 1.8 22 104-125 16-37 (83)
45 d2af7a1 a.152.1.2 (A:1-119) Ga 25.1 4.1 0.0003 27.2 -1.3 44 21-64 19-63 (119)
46 d1u8sa1 d.58.18.5 (A:2-87) put 24.9 17 0.0012 22.3 1.8 17 104-120 19-35 (86)
47 d1tzyc_ a.22.1.1 (C:) Histone 24.7 68 0.005 20.7 5.1 43 58-115 50-92 (95)
48 d1aoya_ a.4.5.3 (A:) Arginine 24.1 20 0.0015 22.6 2.2 18 101-118 23-41 (78)
49 d1y1xa_ a.39.1.8 (A:) Programm 23.9 92 0.0067 20.4 9.9 94 16-119 15-118 (182)
50 d1mmsa2 d.47.1.1 (A:8-70) Ribo 23.3 8.2 0.00059 24.0 0.0 13 107-119 17-29 (63)
51 d1wlza1 a.39.1.7 (A:229-311) D 23.3 11 0.0008 22.4 0.7 25 98-122 33-57 (83)
52 d1jc2a_ a.39.1.5 (A:) Troponin 23.2 67 0.0049 18.6 5.6 50 14-63 4-54 (75)
53 d1oqpa_ a.39.1.5 (A:) Caltract 22.8 67 0.0049 18.4 4.5 46 16-61 6-52 (77)
54 d1h3oa_ a.22.1.3 (A:) TAF(II)- 22.7 52 0.0038 19.4 3.7 33 41-73 13-45 (50)
55 d2fgea1 d.185.1.1 (A:540-797) 21.9 95 0.0069 22.0 5.9 48 38-86 121-168 (258)
56 d1r6bx2 c.37.1.20 (X:169-436) 21.3 1.1E+02 0.0081 22.4 6.4 66 40-113 194-264 (268)
57 d1vlha_ c.26.1.3 (A:) Phosphop 21.1 52 0.0038 20.3 3.8 32 15-46 124-155 (157)
58 d2ilka_ a.26.1.3 (A:) Interleu 21.0 29 0.0021 24.4 2.7 31 38-69 62-95 (155)
59 d1u55a_ d.278.1.1 (A:) Methyl- 20.9 49 0.0036 23.1 4.0 31 37-67 19-59 (188)
60 d1sc6a3 d.58.18.1 (A:327-410) 20.6 23 0.0017 21.7 1.8 17 104-120 25-41 (84)
No 1
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=97.89 E-value=3.9e-05 Score=48.91 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=56.5
Q ss_pred CCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 34 TIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 34 ~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
-||-+.+..++++.|..-=-.-..-+|+=++..||..|+.+|.++|+ ..+|-|+|.+|+..||+-
T Consensus 3 eLP~a~I~ri~k~~~~~ris~ea~~~l~~~~e~fi~~l~~~a~~~a~---------------~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 3 ELPIAPIGRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVKLAK---------------HAGRKTIKAEDIELARKM 67 (68)
T ss_dssp CSCHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HTTCSSCCHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HhCCCcCCHHHHHHHHHh
Confidence 38999999999999887555677889999999999999999999984 223569999999999985
Q ss_pred h
Q 032526 114 Y 114 (139)
Q Consensus 114 y 114 (139)
|
T Consensus 68 ~ 68 (68)
T d1htaa_ 68 F 68 (68)
T ss_dssp C
T ss_pred C
Confidence 4
No 2
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=97.32 E-value=0.0002 Score=47.93 Aligned_cols=67 Identities=19% Similarity=0.218 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 34 TIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 34 ~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
-||.+-+.-+.+++|..--..-+...++-....|+.+|+.||..|++- .+|-++|.+|+..||+-
T Consensus 9 gI~k~~i~Riar~~Gv~ris~d~~~~l~~~l~~~l~~i~~~a~~~~~h---------------akRKTvt~~DV~~Alkr 73 (82)
T d2huec1 9 GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEH---------------AKRKTVTAMDVVYALKR 73 (82)
T ss_dssp SSCHHHHHHHHHHTTCCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTCSEECHHHHHHHTTT
T ss_pred CcCHHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hCCCcCCHHHHHHHHHh
Confidence 599999999999999997667788999999999999999999999841 23458899999999997
Q ss_pred hC
Q 032526 114 YG 115 (139)
Q Consensus 114 yG 115 (139)
+|
T Consensus 74 ~g 75 (82)
T d2huec1 74 QG 75 (82)
T ss_dssp TC
T ss_pred cC
Confidence 66
No 3
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=97.26 E-value=0.00073 Score=42.67 Aligned_cols=63 Identities=19% Similarity=0.351 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHH
Q 032526 35 IPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALR 112 (139)
Q Consensus 35 IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~ 112 (139)
+|-+.+..++++.|-.---.-..-+++-|+..||.+++.+|..+++ .++|-|++.+|+..||+
T Consensus 3 LP~a~I~rI~k~~~~~ris~ea~~~l~~a~e~Fi~~l~~~a~~~a~---------------~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 3 LPIAPVDRLIRKAGAERVSEQAAKVLAEYLEEYAIEIAKKAVEFAR---------------HAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp SCHHHHHHHHHHTTCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTTCSEECHHHHHHHHT
T ss_pred CCHHHHHHHHHhCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HcCCCCCCHHHHHHHHh
Confidence 7889999999998754223445779999999999999999999984 23355999999999985
No 4
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=96.61 E-value=0.0064 Score=40.09 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=58.1
Q ss_pred CCCCCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHH
Q 032526 31 YTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKA 110 (139)
Q Consensus 31 Y~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~A 110 (139)
|..++|-+-+.-+-+..|+..-..-+.+.||-=..==|..|+++|..|.| . -+|.+||.+|+..|
T Consensus 3 ~~S~~~~esik~iAeS~Gi~~l~de~a~~LA~DveYRl~eiiQeA~KFMr--h-------------skR~~Ltt~Did~A 67 (70)
T d1tafb_ 3 YGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMN--H-------------AKRQKLSVRDIDMS 67 (70)
T ss_dssp CSCCCCHHHHHHHHHHTTCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-------------TTCSSBCHHHHHHH
T ss_pred CcccCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-------------hccCcCcHHHHHHH
Confidence 67889999999999999999888888999888888889999999999963 2 23578999999999
Q ss_pred HH
Q 032526 111 LR 112 (139)
Q Consensus 111 L~ 112 (139)
|+
T Consensus 68 Lk 69 (70)
T d1tafb_ 68 LK 69 (70)
T ss_dssp HC
T ss_pred Hc
Confidence 84
No 5
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.43 E-value=0.0088 Score=39.36 Aligned_cols=68 Identities=18% Similarity=0.256 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHhC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHH
Q 032526 34 TIPDELVEHYLAKS--GFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKAL 111 (139)
Q Consensus 34 ~IPD~Vt~yyL~~a--Gf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL 111 (139)
.+|-+-+..+++.+ +-.-=-.-..-+|+-|+.-||..++..|.++|+. ++|-+++-+|+..||
T Consensus 2 ~LP~a~v~ri~K~~~p~~~~is~ea~~~i~~a~e~Fi~~lt~~A~~~a~~---------------~~rKTI~~~dv~~Al 66 (87)
T d1n1ja_ 2 YLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQ---------------EKRKTINGEDILFAM 66 (87)
T ss_dssp CCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTCSSBCHHHHHHHH
T ss_pred CCcHhHHHHHHHHhCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HCCCCCCHHHHHHHH
Confidence 47888888888765 1111123456799999999999999999998842 224499999999999
Q ss_pred HHhCc
Q 032526 112 REYGV 116 (139)
Q Consensus 112 ~EyGI 116 (139)
.+.|-
T Consensus 67 ~~~~~ 71 (87)
T d1n1ja_ 67 STLGF 71 (87)
T ss_dssp HHTTC
T ss_pred HHcCc
Confidence 99874
No 6
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=96.29 E-value=0.0093 Score=43.07 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=55.1
Q ss_pred CCCCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHH
Q 032526 32 TPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKAL 111 (139)
Q Consensus 32 ~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL 111 (139)
.=.+|-+-+.-+++.+|..---.-..-+|+-++.-|+.+|+.+|.+||+ ..+|-+||-+|+..||
T Consensus 77 ~~~fp~a~IkRi~k~~g~~ris~dA~~~l~~~~E~fi~~l~~~A~~~a~---------------~~kRkTI~~~DI~~Av 141 (151)
T d1f1ea_ 77 GELFGRATVRRILKRAGIERASSDAVDLYNKLICRATEELGEKAAEYAD---------------EDGRKTVQGEDVEKAI 141 (151)
T ss_dssp SCCCCHHHHHHHHHHTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HTTCSEECHHHHHHHH
T ss_pred cCccCHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HhCCCcCCHHHHHHHH
Confidence 4468999999999999987434445779999999999999999999984 2335599999999998
Q ss_pred H
Q 032526 112 R 112 (139)
Q Consensus 112 ~ 112 (139)
.
T Consensus 142 ~ 142 (151)
T d1f1ea_ 142 T 142 (151)
T ss_dssp H
T ss_pred H
Confidence 6
No 7
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.95 E-value=0.0062 Score=40.38 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHHhCc
Q 032526 56 LIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYGV 116 (139)
Q Consensus 56 v~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~EyGI 116 (139)
-.-+|+-||.-||..++..|...|+. ++|-+++-+||..||.+.|.
T Consensus 23 A~~~i~~aae~FI~~lt~~A~~~a~~---------------~~rKtI~~~dv~~Al~~~~f 68 (89)
T d2bykb1 23 ARAAIARAASVFAIFVTSSSTALAHK---------------QNHKTITAKDILQTLTELDF 68 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTCSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------hCCCccCHHHHHHHHHHCCc
Confidence 35689999999999999999998742 22349999999999999885
No 8
>d1h3ob_ a.22.1.3 (B:) TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.67 E-value=0.054 Score=35.61 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=53.3
Q ss_pred chHHHHHHHhcccCCCCCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccc
Q 032526 18 DAALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKD 97 (139)
Q Consensus 18 d~~L~efL~~LddY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd 97 (139)
-..|.||+.+.+- =..=|+.+.-++.=.|..||.+|+..|.+.||-|.+
T Consensus 6 K~~L~eLv~~idp------------------~~~ld~~vee~ll~iADdFV~~V~~~ac~lAKhR~s------------- 54 (74)
T d1h3ob_ 6 KKKLQDLVREVDP------------------NEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKS------------- 54 (74)
T ss_dssp HHHHHHHHHHHCS------------------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------------
T ss_pred HHHHHHHHHHhCC------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------------
Confidence 3567788877742 123488999999999999999999999999998743
Q ss_pred cceeeeHHHHHHHHH-HhCccc
Q 032526 98 KRLILTMEDLSKALR-EYGVNV 118 (139)
Q Consensus 98 ~k~vLTmEDL~~AL~-EyGInv 118 (139)
-+|...|+.-.|+ +|+|-|
T Consensus 55 --~~le~kDvql~LeR~wNm~i 74 (74)
T d1h3ob_ 55 --STLEVKDVQLHLERQWNMWI 74 (74)
T ss_dssp --CEECHHHHHHHHHHHTCCCC
T ss_pred --CCCcHHHHHHHHHhhcCccC
Confidence 2788889988887 677643
No 9
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.60 E-value=0.015 Score=41.33 Aligned_cols=65 Identities=23% Similarity=0.451 Sum_probs=52.3
Q ss_pred CCCHHHHHHHHHhCCCCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHH
Q 032526 34 TIPDELVEHYLAKSGFQCPDVR----LIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSK 109 (139)
Q Consensus 34 ~IPD~Vt~yyL~~aGf~~~D~R----v~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~ 109 (139)
.+|-+.+..+++... ++.+ ..-+|+-|+.-||..|+..|..+|+. ++|-|++-+|+..
T Consensus 4 ~LP~a~I~kI~K~~~---~~~~is~dA~~~i~~a~~~Fi~~lt~~A~~~a~~---------------~~RkTi~~~Dv~~ 65 (135)
T d1jfib_ 4 TIPRAAINKMIKETL---PNVRVANDARELVVNCCTEFIHLISSEANEICNK---------------SEKKTISPEHVIQ 65 (135)
T ss_dssp CCCHHHHHHHHHHHS---TTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTCSSBCHHHHHH
T ss_pred cccHHHHHHHHhhCC---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hCCCcccHHHHHH
Confidence 578888999988864 2333 35689999999999999999999842 2244999999999
Q ss_pred HHHHhCc
Q 032526 110 ALREYGV 116 (139)
Q Consensus 110 AL~EyGI 116 (139)
||.+.|.
T Consensus 66 Al~~~~f 72 (135)
T d1jfib_ 66 ALESLGF 72 (135)
T ss_dssp HHHHHTT
T ss_pred HHHHcCc
Confidence 9999886
No 10
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.14 E-value=0.015 Score=37.25 Aligned_cols=65 Identities=20% Similarity=0.263 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHhCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 35 IPDELVEHYLAKSGF-QCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 35 IPD~Vt~yyL~~aGf-~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
+|-+-+..+++..+= ..--.-..-+++-|++=||..++..|++.|+. ++|-+++.+||..|+++
T Consensus 1 LP~srVkrImK~~~~~~~is~ea~~~i~~a~E~Fi~~l~~~A~~~a~~---------------~~rkti~~~dl~~av~~ 65 (78)
T d1n1jb_ 1 LPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTED---------------NKRRTLQRNDIAMAITK 65 (78)
T ss_dssp CCHHHHHHHHTTSTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTCSEECHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------cCCCcCCHHHHHHHHhc
Confidence 366667777763210 00123456799999999999999999998852 22349999999999985
Q ss_pred h
Q 032526 114 Y 114 (139)
Q Consensus 114 y 114 (139)
.
T Consensus 66 ~ 66 (78)
T d1n1jb_ 66 F 66 (78)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.09 E-value=0.16 Score=32.84 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=48.5
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHH
Q 032526 38 ELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALR 112 (139)
Q Consensus 38 ~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~ 112 (139)
.++.-+|+.-|++.=+|||.-.+==-+-+++++|..||.-|+.-. +|..++.+|+.-|..
T Consensus 5 ~~i~~iL~~~GV~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA---------------~k~~id~dDVkLAi~ 64 (68)
T d1tafa_ 5 QVIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHA---------------RKKTIDLDDVRLATE 64 (68)
T ss_dssp HHHHHHHHHTTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------------TCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------CCCCCCHHHHHHHHH
Confidence 367789999999999999987776677999999999999998531 123679999988865
No 12
>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.75 E-value=0.027 Score=35.16 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHhCCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHH
Q 032526 35 IPDELVEHYLAKSGFQC-PDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKAL 111 (139)
Q Consensus 35 IPD~Vt~yyL~~aGf~~-~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL 111 (139)
+|-+-+..+|+...--. --.-..=+++-|++-||.+++..|+++++ .++|-+|+-+||..|+
T Consensus 3 fP~srVkkimk~~~~~~~is~~A~~~~~~a~E~Fi~~l~~~A~~~a~---------------~~krktI~~~dl~~ai 65 (66)
T d1jfia_ 3 FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQ---------------SRNAKTMTTSHLKQCI 65 (66)
T ss_dssp CCHHHHHHHHTTSTTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHH---------------TC---CBCHHHHHTTC
T ss_pred CChHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HhCCCcCCHHHHHHHh
Confidence 57777888887542111 11233568999999999999999999884 2234489999998764
No 13
>d2byka1 a.22.1.3 (A:29-100) Chrac-16 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.16 E-value=0.1 Score=33.29 Aligned_cols=44 Identities=23% Similarity=0.241 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHHh
Q 032526 57 IRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREY 114 (139)
Q Consensus 57 ~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~Ey 114 (139)
.=|+|-|++=||.+++..|+.++.. ..++-+|+-.||+.|....
T Consensus 15 ~~lvskAtElFi~~L~~~a~~~a~~--------------~~~~ktl~~~dl~~aV~~~ 58 (72)
T d2byka1 15 LFLMTKCTELFVRHLAGAAYTEEFG--------------QRPGEALKYEHLSQVVNKN 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--------------TCCSCEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------------ccCCccccHHHHHHHHccC
Confidence 4589999999999999999886521 1112279999999998754
No 14
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=88.68 E-value=1.4 Score=30.97 Aligned_cols=67 Identities=15% Similarity=0.077 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHhC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 35 IPDELVEHYLAKS-GFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 35 IPD~Vt~yyL~~a-Gf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
+|=+-+.-.|++. |-.--....+-.+.=...-|+..|+.+|...|+ .++|-|++.||+..|+..
T Consensus 2 lP~a~I~rilk~~~~~~ris~da~~~l~~~~~~~~~~Ia~eA~~l~~---------------~~~rKTi~~edi~~a~~~ 66 (151)
T d1f1ea_ 2 LPKAAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLD---------------ASGKKTLMEEHLKALADV 66 (151)
T ss_dssp CCHHHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------TTTCSEECHHHHHHHHHH
T ss_pred CCccHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HcCCCcCCHHHHHHHHHh
Confidence 5778888888863 544344555666777777888888898888873 234569999999999987
Q ss_pred hCc
Q 032526 114 YGV 116 (139)
Q Consensus 114 yGI 116 (139)
.|+
T Consensus 67 ~~~ 69 (151)
T d1f1ea_ 67 LMV 69 (151)
T ss_dssp HTC
T ss_pred ccc
Confidence 774
No 15
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=46.79 E-value=13 Score=27.34 Aligned_cols=58 Identities=19% Similarity=0.348 Sum_probs=34.8
Q ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 39 LVEHYLAKSGFQCPDVRLIRLVAVATQKF----VAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 39 Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKF----isDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
+...||.+.++. .|..+..|. -.++.| |..++++|...+ +| +++..+|++||..||..
T Consensus 190 il~~~l~~~~~~-~~~~~~~la-~~t~G~s~adi~~l~~~A~~~a-~~--------------~~~~~i~~~d~~~Al~r 251 (256)
T d1lv7a_ 190 ILKVHMRRVPLA-PDIDAAIIA-RGTPGFSGADLANLVNEAALFA-AR--------------GNKRVVSMVEFEKAKDK 251 (256)
T ss_dssp HHHHHHTTSCBC-TTCCHHHHH-HTCTTCCHHHHHHHHHHHHHHH-HH--------------TTCSSBCHHHHHHHHHH
T ss_pred HHHHhccCCCcC-cccCHHHHH-HhCCCCCHHHHHHHHHHHHHHH-HH--------------cCCCccCHHHHHHHHHH
Confidence 566777776665 455554443 234444 555566655443 12 23447899999999974
No 16
>d1n1fa_ a.26.1.3 (A:) Interleukin-19 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.35 E-value=8.7 Score=27.20 Aligned_cols=31 Identities=23% Similarity=0.577 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCC---CCCChHHHHHHHHHHHHHHH
Q 032526 38 ELVEHYLAKSGF---QCPDVRLIRLVAVATQKFVA 69 (139)
Q Consensus 38 ~Vt~yyL~~aGf---~~~D~Rv~RLiSLAaQKFis 69 (139)
++.++||..+ | +..+|.++|-|+-.+++|.+
T Consensus 59 ~lL~FYLe~V-fp~~~~~~~~i~~~v~sLan~f~~ 92 (156)
T d1n1fa_ 59 NLLAFYVDRV-FKDHQEPNPKILRKISSIANSFLY 92 (156)
T ss_dssp HHHHHHHHTH-HHHCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hHhhhcccchhhhHHHHHHHHHHH
Confidence 4899999998 8 67899999999999998865
No 17
>d1zrja1 a.140.2.1 (A:1-37) Heterogeneous nuclear ribonucleoprotein U-like protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.40 E-value=6.2 Score=22.09 Aligned_cols=19 Identities=21% Similarity=0.515 Sum_probs=17.1
Q ss_pred eeeHHHHHHHHHHhCcccC
Q 032526 101 ILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 101 vLTmEDL~~AL~EyGInv~ 119 (139)
.||+.+|-..|+++|++++
T Consensus 5 ~m~V~eLK~~Lk~rgL~~s 23 (37)
T d1zrja1 5 RLKVNELREELQRRGLDTR 23 (37)
T ss_dssp GSCHHHHHHHHHHTTCCCC
T ss_pred HCcHHHHHHHHHHCCCCCC
Confidence 4899999999999999875
No 18
>d1b4aa1 a.4.5.3 (A:4-78) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.14 E-value=5.7 Score=25.24 Aligned_cols=19 Identities=47% Similarity=0.616 Sum_probs=15.3
Q ss_pred eeeHHHHHHHHHHhCcccC
Q 032526 101 ILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 101 vLTmEDL~~AL~EyGInv~ 119 (139)
+=|-|||..+|++.||+|.
T Consensus 16 i~tQ~eL~~~L~~~Gi~vT 34 (75)
T d1b4aa1 16 IETQDELVDRLREAGFNVT 34 (75)
T ss_dssp CCSHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHcCCcee
Confidence 5577888889998888874
No 19
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=44.60 E-value=14 Score=23.38 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=26.2
Q ss_pred CCchHHHHHHHhcccCCCCCCHHHHHHHHHhCCC
Q 032526 16 DDDAALTEFLSSLMGYTPTIPDELVEHYLAKSGF 49 (139)
Q Consensus 16 ~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~aGf 49 (139)
-+...+++.+..=+++...||++|.+ |+.+.|+
T Consensus 154 ISST~IR~~i~~~~~~~~lvp~~V~~-yI~~~~L 186 (189)
T d1kama_ 154 VSSTMIRERFKSKKPTDYLIPDKVKK-YVEENGL 186 (189)
T ss_dssp CCHHHHHHHHHHTCCCTTTSCHHHHH-HHHHTTC
T ss_pred CChHHHHHHHHcCCCchHhCCHHHHH-HHHHcCC
Confidence 56788899987767788889999999 5666664
No 20
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=43.64 E-value=13 Score=24.08 Aligned_cols=31 Identities=10% Similarity=0.080 Sum_probs=26.8
Q ss_pred CCchHHHHHHHhcccCCCCCCHHHHHHHHHh
Q 032526 16 DDDAALTEFLSSLMGYTPTIPDELVEHYLAK 46 (139)
Q Consensus 16 ~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~ 46 (139)
-+...+++.+..=.+..-.||++|.+|+.+.
T Consensus 179 ISST~IR~~i~~g~~i~~lvP~~V~~yI~~~ 209 (213)
T d1k4ma_ 179 ISATIIRERLQNGESCEDLLPEPVLTYINQQ 209 (213)
T ss_dssp CCHHHHHHHHHTTCCCTTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCChhHhCCHHHHHHHHHc
Confidence 4678999999888899999999999987654
No 21
>d2odgc1 a.140.1.1 (C:2-47) Inner nuclear membrane protein emerin {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.04 E-value=6.6 Score=23.31 Aligned_cols=19 Identities=26% Similarity=0.391 Sum_probs=16.6
Q ss_pred ceeeeHHHHHHHHHHhCcc
Q 032526 99 RLILTMEDLSKALREYGVN 117 (139)
Q Consensus 99 k~vLTmEDL~~AL~EyGIn 117 (139)
--+|+-++|..-|.+|||.
T Consensus 3 y~~lSd~El~~lL~~y~I~ 21 (46)
T d2odgc1 3 YADLSDTELTTLLRRYNIP 21 (46)
T ss_dssp GGGSCHHHHHHHHHHTTCC
T ss_pred hhhhcHHHHHHHHHHhCCC
Confidence 3478899999999999996
No 22
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.78 E-value=46 Score=23.79 Aligned_cols=64 Identities=14% Similarity=0.094 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHH
Q 032526 34 TIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALR 112 (139)
Q Consensus 34 ~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~ 112 (139)
++|=+-+..+|++.|-.--+....=.++-+-+=+.++|+..|-.+++. .+|..+|.+|+..|+.
T Consensus 99 ~fPV~rv~rlLk~~~a~RVs~~A~vyLaavLEyl~aeILelAgn~a~~---------------~krkrItp~dI~lAi~ 162 (172)
T d1q9ca_ 99 SLPVEKIHPLLKEVLGYKIDHQVSVYIVAVLEYISADILKLAGNYVRN---------------IRHYEITKQDIKVAMC 162 (172)
T ss_dssp CCCHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------HTCSBCCHHHHHHHHH
T ss_pred eecHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHH---------------cCCceecHHHHHHHHh
Confidence 566666777776655444455555556666677888888888887742 1234689999999875
No 23
>d1h1js_ a.140.2.1 (S:) S/mar DNA-binding protein Tho1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.31 E-value=7.9 Score=22.33 Aligned_cols=20 Identities=25% Similarity=0.255 Sum_probs=17.6
Q ss_pred eeeeHHHHHHHHHHhCcccC
Q 032526 100 LILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 100 ~vLTmEDL~~AL~EyGInv~ 119 (139)
..||+.+|-..|+++|+.+.
T Consensus 6 ~~ltv~eLK~~lk~rgL~~s 25 (44)
T d1h1js_ 6 SSLTVVQLKDLLTKRNLSVG 25 (44)
T ss_dssp GGCCHHHHHHHHHHTTCCCC
T ss_pred HHCcHHHHHHHHHHCCCCCC
Confidence 36899999999999999874
No 24
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.55 E-value=16 Score=26.34 Aligned_cols=16 Identities=38% Similarity=0.542 Sum_probs=13.1
Q ss_pred cceeeeHHHHHHHHHH
Q 032526 98 KRLILTMEDLSKALRE 113 (139)
Q Consensus 98 ~k~vLTmEDL~~AL~E 113 (139)
....+||+|+..||++
T Consensus 243 ~~~~it~~Df~~AL~~ 258 (258)
T d1e32a2 243 NSLAVTMDDFRWALSQ 258 (258)
T ss_dssp HHCCBCHHHHHHHHTC
T ss_pred ccCccCHHHHHHHhCc
Confidence 3567899999999974
No 25
>d2p5ka1 a.4.5.3 (A:2-64) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=38.19 E-value=8.7 Score=23.53 Aligned_cols=19 Identities=32% Similarity=0.462 Sum_probs=16.0
Q ss_pred eeeHHHHHHHHHHhCcccC
Q 032526 101 ILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 101 vLTmEDL~~AL~EyGInv~ 119 (139)
+=|-++|..+|++.||.|.
T Consensus 18 i~tQ~eL~~~L~~~G~~vT 36 (63)
T d2p5ka1 18 IETQDELVDMLKQDGYKVT 36 (63)
T ss_dssp CCSHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHcCCCee
Confidence 5577899999999999875
No 26
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=37.36 E-value=20 Score=22.45 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=27.8
Q ss_pred CCchHHHHHHHhcccCCCCCCHHHHHHHHHhCC
Q 032526 16 DDDAALTEFLSSLMGYTPTIPDELVEHYLAKSG 48 (139)
Q Consensus 16 ~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~aG 48 (139)
-+...+++.+..=++..-.+|++|.+|+-+|-|
T Consensus 127 ISST~IR~~i~~g~~i~~lVP~~V~~yIkek~~ 159 (160)
T d1od6a_ 127 VSSTMVKEIARYGGDVSKLVPPATLRALKAKLG 159 (160)
T ss_dssp CCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHTT
T ss_pred cchHHHHHHHHcCCChHHhcCHHHHHHHHHHhc
Confidence 467888998876567888899999999988876
No 27
>d1jeqa1 a.140.2.1 (A:559-609) DNA binding C-terminal domain of ku70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.97 E-value=10 Score=22.33 Aligned_cols=20 Identities=30% Similarity=0.366 Sum_probs=17.6
Q ss_pred eeeeHHHHHHHHHHhCcccC
Q 032526 100 LILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 100 ~vLTmEDL~~AL~EyGInv~ 119 (139)
-.||+.+|-..|+++|+.+.
T Consensus 16 ~kltV~~LK~~lk~~gL~~s 35 (51)
T d1jeqa1 16 GKFTVPMLKEACRAYGLKSG 35 (51)
T ss_dssp GGCCHHHHHHHHHHTTCCCC
T ss_pred hhCcHHHHHHHHHHcCCCCC
Confidence 35899999999999999874
No 28
>d1bwda_ d.126.1.2 (A:) L-arginine: inosamine-phosphate amidinotransferase {Streptomyces griseus [TaxId: 1911]}
Probab=34.72 E-value=8.7 Score=27.73 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=15.8
Q ss_pred HHHHHHHHhCcccCCCCc
Q 032526 106 DLSKALREYGVNVKHQEY 123 (139)
Q Consensus 106 DL~~AL~EyGInv~rP~Y 123 (139)
-|...|++.||.|.||+=
T Consensus 67 ~l~~~Le~~GV~V~rp~~ 84 (348)
T d1bwda_ 67 VLAAELTKLGVTVRRPGP 84 (348)
T ss_dssp HHHHHHHHTTCEEECCCC
T ss_pred HHHHHHHHcCceEEeccc
Confidence 388999999999999963
No 29
>d1f7ca_ a.116.1.1 (A:) Graf {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=33.91 E-value=19 Score=24.53 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=31.2
Q ss_pred chHHHHHHHhcccCCCCCCHHHHHHHHHhCCCCCCChHHHHH
Q 032526 18 DAALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRL 59 (139)
Q Consensus 18 d~~L~efL~~LddY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RL 59 (139)
..-|..||..|. .|+||.++.+.++.-.+....+.++..+
T Consensus 68 a~~lK~~lreLp--~pLi~~~~~~~~~~~~~~~~~~~~~~~~ 107 (191)
T d1f7ca_ 68 TSALKTYLRMLP--GPLMMYQFQRSFIKAAKLENQESRVSEI 107 (191)
T ss_dssp HHHHHHHHHTSS--SCTTCHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHHhCC--CCccHHHHHHHHHHHHhccCHHHHHHHH
Confidence 446778888887 5999999999999988877666666554
No 30
>d1jdwa_ d.126.1.2 (A:) L-arginine: glycine amidinotransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.63 E-value=9.4 Score=27.10 Aligned_cols=20 Identities=25% Similarity=0.587 Sum_probs=17.2
Q ss_pred eHHHHHHHHHHhCcccCCCC
Q 032526 103 TMEDLSKALREYGVNVKHQE 122 (139)
Q Consensus 103 TmEDL~~AL~EyGInv~rP~ 122 (139)
..+-|...|++.||.|.||+
T Consensus 63 e~d~l~~~Le~~GV~V~rp~ 82 (360)
T d1jdwa_ 63 EIEEMCNILKTEGVTVRRPD 82 (360)
T ss_dssp HHHHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHHHcCcEEeecc
Confidence 35668899999999999996
No 31
>d2outa1 a.140.3.2 (A:94-131) Uncharacterized protein HI1507 in Mu-like prophage FluMu region {Haemophilus influenzae [TaxId: 727]}
Probab=33.36 E-value=11 Score=21.23 Aligned_cols=18 Identities=33% Similarity=0.558 Sum_probs=15.2
Q ss_pred HHHHHHHHHHhCcccCCC
Q 032526 104 MEDLSKALREYGVNVKHQ 121 (139)
Q Consensus 104 mEDL~~AL~EyGInv~rP 121 (139)
+|.|.+.|.|+||..+..
T Consensus 1 veqlkaqltergitfkqs 18 (38)
T d2outa1 1 VEQLKAQLTERGITFKQS 18 (38)
T ss_dssp SHHHHHHHHHHTCCCSSS
T ss_pred ChHHHHHHHHcCceeecc
Confidence 378899999999998764
No 32
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=33.27 E-value=53 Score=20.65 Aligned_cols=25 Identities=16% Similarity=0.046 Sum_probs=19.1
Q ss_pred cccceeeeHHHHHHHHHHhCcccCC
Q 032526 96 KDKRLILTMEDLSKALREYGVNVKH 120 (139)
Q Consensus 96 kd~k~vLTmEDL~~AL~EyGInv~r 120 (139)
+++.=.|+.++|...|...|..+..
T Consensus 88 ~~~~g~I~~~el~~~l~~~g~~ls~ 112 (145)
T d2mysb_ 88 PDGKGSIKKSFLEELLTTGGGRFTP 112 (145)
T ss_pred hcccchhhHHHHHHHHHHcCCCCCH
Confidence 3444468999999999999987654
No 33
>d1xa6a1 a.116.1.1 (A:271-466) Beta-chimaerin, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.36 E-value=14 Score=25.22 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=32.8
Q ss_pred hHHHHHHHhcccCCCCCCHHHHHHHHHhCCCCCCChHHHHHHHH
Q 032526 19 AALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAV 62 (139)
Q Consensus 19 ~~L~efL~~LddY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSL 62 (139)
.-|..||..|-+ |+||.+..+.++....-...+.|+..+-.+
T Consensus 78 ~~lK~fLr~Lp~--pli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (196)
T d1xa6a1 78 GALKLYFRDLPI--PVITYDTYSKFIDAAKISNADERLEAVHEV 119 (196)
T ss_dssp HHHHHHHHHCSS--CTTCSTTHHHHHTTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC--ccCCHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 357888888874 999999999999988877777777555433
No 34
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=31.39 E-value=17 Score=22.83 Aligned_cols=32 Identities=6% Similarity=0.002 Sum_probs=26.4
Q ss_pred CCCchHHHHHHHhcccCCCCCCHHHHHHHHHh
Q 032526 15 HDDDAALTEFLSSLMGYTPTIPDELVEHYLAK 46 (139)
Q Consensus 15 ~~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~ 46 (139)
.-+...+++-+..=++..-.+|++|.+|+.+|
T Consensus 124 ~ISST~IR~~i~~~~~i~~lvP~~V~~yIkek 155 (157)
T d1tfua_ 124 FVSSSLAKEVAMLGGDVSELLPEPVNRRLRDR 155 (157)
T ss_dssp TCCHHHHHHHHHTTCCCGGGSCHHHHHHHHHH
T ss_pred cccHHHHHHHHHcCCChHHhcCHHHHHHHHHh
Confidence 45678889888766788888999999999765
No 35
>d2ieaa3 c.48.1.1 (A:701-886) Pyruvate dehydrogenase E1 component, C-domain {Escherichia coli [TaxId: 562]}
Probab=30.65 E-value=13 Score=26.48 Aligned_cols=22 Identities=5% Similarity=0.268 Sum_probs=19.9
Q ss_pred eeeHHHHHHHHHHhCcccCCCC
Q 032526 101 ILTMEDLSKALREYGVNVKHQE 122 (139)
Q Consensus 101 vLTmEDL~~AL~EyGInv~rP~ 122 (139)
.++.+-+..|+++|||+..||.
T Consensus 161 ~i~~~~~~~a~~~~~~~~~~~~ 182 (186)
T d2ieaa3 161 EIDKKVVADAIAKFNIDADKVN 182 (186)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCC
T ss_pred CcCHHHHHHHHHHhCcCCCCCC
Confidence 4788999999999999999985
No 36
>d3cjsb1 d.47.1.1 (B:1-70) Ribosomal protein L11, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=30.18 E-value=8.3 Score=24.41 Aligned_cols=13 Identities=31% Similarity=0.480 Sum_probs=11.5
Q ss_pred HHHHHHHhCcccC
Q 032526 107 LSKALREYGVNVK 119 (139)
Q Consensus 107 L~~AL~EyGInv~ 119 (139)
|.+||..+||||-
T Consensus 23 vGpaLG~~GiNi~ 35 (70)
T d3cjsb1 23 VGPALGQHGANIM 35 (70)
T ss_dssp HHHHHHTTTCCHH
T ss_pred CcchhhhcCcCHH
Confidence 7899999999973
No 37
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=29.85 E-value=13 Score=21.77 Aligned_cols=24 Identities=29% Similarity=0.412 Sum_probs=19.5
Q ss_pred cccceeeeHHHHHHHHHHhCcccC
Q 032526 96 KDKRLILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 96 kd~k~vLTmEDL~~AL~EyGInv~ 119 (139)
+++.=.|+.+||..+|...|+++.
T Consensus 19 ~d~~G~I~~~el~~~l~~~g~~~s 42 (73)
T d2pq3a1 19 KDGDGTITTKELGTVMRSLGQNPT 42 (73)
T ss_dssp TTSSSEEEGGGHHHHHHHTTCCCC
T ss_pred CCCCceEeHHHHHHHHHHhCCCCC
Confidence 344557999999999999998865
No 38
>d1zela1 a.4.5.83 (A:1-82) Hypothetical protein Rv2827c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.79 E-value=11 Score=24.16 Aligned_cols=22 Identities=36% Similarity=0.656 Sum_probs=19.6
Q ss_pred ccccceeeeHHHHHHHHHHhCc
Q 032526 95 QKDKRLILTMEDLSKALREYGV 116 (139)
Q Consensus 95 ~kd~k~vLTmEDL~~AL~EyGI 116 (139)
.+|+-+|.|-|||..-|.|-|-
T Consensus 23 ardrpvvvtkedltqrlteagc 44 (82)
T d1zela1 23 ARDRPVVVTKEDLTQRLTEAGC 44 (82)
T ss_dssp HHHCCSSEEHHHHHHHHHHTTC
T ss_pred ccCCceEEeHHHHHHHHHhccc
Confidence 4678899999999999999885
No 39
>d2db7a1 a.273.1.1 (A:3-57) Hairy/enhancer-of-split related with YRPW motif protein 1; HESR-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.72 E-value=32 Score=20.71 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=21.2
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHHH
Q 032526 38 ELVEHYLAKSGFQCPDVRLIRLVAV 62 (139)
Q Consensus 38 ~Vt~yyL~~aGf~~~D~Rv~RLiSL 62 (139)
||+.|.-.--|.++.||-=.||++=
T Consensus 23 EV~RyL~~~eg~d~~d~~r~RLl~H 47 (55)
T d2db7a1 23 EVARYLSIIEGLDASDPLRVRLVSH 47 (55)
T ss_dssp HHHHHHHHTSCCCTTCHHHHHHHHH
T ss_pred HHHHHhhccCCCCcchHHHHHHHHH
Confidence 6788888888999999988899874
No 40
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.67 E-value=22 Score=20.72 Aligned_cols=24 Identities=17% Similarity=0.368 Sum_probs=19.8
Q ss_pred ccceeeeHHHHHHHHHHhCcccCC
Q 032526 97 DKRLILTMEDLSKALREYGVNVKH 120 (139)
Q Consensus 97 d~k~vLTmEDL~~AL~EyGInv~r 120 (139)
++.=.++.+||..+|...|+++..
T Consensus 22 d~~G~I~~~el~~~l~~~g~~~t~ 45 (77)
T d1f54a_ 22 DNNGSISSSELATVMRSLGLSPSE 45 (77)
T ss_dssp TCSSEEEHHHHHHHHHHHTCCCCH
T ss_pred CCCCeEChHHHHHHHHHhCCCCCH
Confidence 334479999999999999998764
No 41
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=26.22 E-value=24 Score=21.91 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=25.0
Q ss_pred CCCchHHHHHHHhcccCCCCCCHHHHHHHHHh
Q 032526 15 HDDDAALTEFLSSLMGYTPTIPDELVEHYLAK 46 (139)
Q Consensus 15 ~~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~ 46 (139)
.-+...+++.+..=+|+.=.+|++|.+|+-+|
T Consensus 124 ~ISST~IR~~i~~g~di~~lvP~~V~~yI~~k 155 (157)
T d1qjca_ 124 FISSSLVKEVARHQGDVTHFLPENVHQALMAK 155 (157)
T ss_dssp TCCHHHHHHHHHTTCCCGGGSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHcCCChHHhCCHHHHHHHHHh
Confidence 45678889888665666667999999998765
No 42
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.22 E-value=8.9 Score=24.44 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=14.5
Q ss_pred CCCCCchHHHHHHHhcccCCCC
Q 032526 13 GRHDDDAALTEFLSSLMGYTPT 34 (139)
Q Consensus 13 ~~~~~d~~L~efL~~LddY~P~ 34 (139)
++...|..|.++|.+|.+|.=+
T Consensus 33 G~~I~d~~ls~lL~nL~k~~~i 54 (73)
T d2fnaa1 33 GIEISDSEIYNYLTQLTKHSWI 54 (73)
T ss_dssp CSCCCHHHHHHHHHHHHHTTSE
T ss_pred CCCCChHHHHHHHHHHHHcCce
Confidence 3445677777777777766533
No 43
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.88 E-value=25 Score=22.59 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=25.5
Q ss_pred CCCchHHHHHHHhcccCCCCCCHHHHHHHHHhCC
Q 032526 15 HDDDAALTEFLSSLMGYTPTIPDELVEHYLAKSG 48 (139)
Q Consensus 15 ~~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~aG 48 (139)
.-+...+++-+..=+++...+|++|.+|+=+-.|
T Consensus 126 ~ISST~IR~~i~~g~~~~~lvP~~V~~~i~~~~g 159 (167)
T d1ej2a_ 126 RYSGTEVRRRMLDDGDWRSLLPESVVEVIDEING 159 (167)
T ss_dssp TSSHHHHHHHHHHTCCCGGGSCHHHHHHHHHTTH
T ss_pred cccHHHHHHHHHcCCChhHhCCHHHHHHHHHCCc
Confidence 3568889998876678888899999985444344
No 44
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.15 E-value=16 Score=21.99 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhCcccCCCCccc
Q 032526 104 MEDLSKALREYGVNVKHQEYFA 125 (139)
Q Consensus 104 mEDL~~AL~EyGInv~rP~Yy~ 125 (139)
+.+++..|.++|+||..-.-++
T Consensus 16 Va~vt~~l~~~g~NI~d~~q~~ 37 (83)
T d1zpva1 16 VAGVSGKIAELGLNIDDISQTV 37 (83)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHHCCCeEEEEEeEE
Confidence 5789999999999997554443
No 45
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.09 E-value=4.1 Score=27.17 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=26.0
Q ss_pred HHHHHHhcccCCCCCCHHHHHHHHHhC-CCCCCChHHHHHHHHHH
Q 032526 21 LTEFLSSLMGYTPTIPDELVEHYLAKS-GFQCPDVRLIRLVAVAT 64 (139)
Q Consensus 21 L~efL~~LddY~P~IPD~Vt~yyL~~a-Gf~~~D~Rv~RLiSLAa 64 (139)
.....++|.+..|-+++-++++..... +=+.=|.|.++||.||+
T Consensus 19 ~~~~~~~l~~~~p~~~~~~~~~~fg~~~~r~~Ld~k~r~Li~la~ 63 (119)
T d2af7a1 19 YTAIRDELEDVAPDLARFVAEFAYGDVYSRGVLDLKTRELLTLAA 63 (119)
T ss_dssp HHHHHTSHHHHCHHHHHHHHHTCCCCCCTCCSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCHHHHHHHHHHhhhhhcCCCCCCHHHHHHHHHHH
Confidence 345566677777766665555431100 00123899999999987
No 46
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=24.93 E-value=17 Score=22.30 Aligned_cols=17 Identities=12% Similarity=0.352 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhCcccCC
Q 032526 104 MEDLSKALREYGVNVKH 120 (139)
Q Consensus 104 mEDL~~AL~EyGInv~r 120 (139)
+.+++..|.|+|+||-.
T Consensus 19 va~vt~~l~~~g~NI~d 35 (86)
T d1u8sa1 19 CNEVVRLVTQAGCNIID 35 (86)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCeEEE
Confidence 57899999999999854
No 47
>d1tzyc_ a.22.1.1 (C:) Histone H3 {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=24.71 E-value=68 Score=20.66 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHHhC
Q 032526 58 RLVAVATQKFVAEVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALREYG 115 (139)
Q Consensus 58 RLiSLAaQKFisDIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~EyG 115 (139)
-.+--|+.-|+-++-.||.-++. .-+|+||+..|+.-|..=.|
T Consensus 50 ~aLQea~E~yLv~lfeda~~~a~---------------HakRvTl~~kD~~LarrirG 92 (95)
T d1tzyc_ 50 MALQEASEAYLVGLFEDTNLCAI---------------HAKRVTIMPKDIQLARRIRG 92 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---------------HTTCSEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH---------------hcCCCcCCHHHHHHHHHHhc
Confidence 35556888888888888888762 12378999999998887555
No 48
>d1aoya_ a.4.5.3 (A:) Arginine repressor (ArgR), N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=24.06 E-value=20 Score=22.62 Aligned_cols=18 Identities=28% Similarity=0.484 Sum_probs=14.7
Q ss_pred eeeHHHHHHHHHHhCc-cc
Q 032526 101 ILTMEDLSKALREYGV-NV 118 (139)
Q Consensus 101 vLTmEDL~~AL~EyGI-nv 118 (139)
+=|-++|...|++.|| +|
T Consensus 23 i~tQ~eL~~~L~~~G~~~v 41 (78)
T d1aoya_ 23 FSSQGEIVAALQEQGFDNI 41 (78)
T ss_dssp CCSHHHHHHHHHHHTCSSC
T ss_pred cCCHHHHHHHHHHcCCcch
Confidence 5678899999999998 45
No 49
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}
Probab=23.95 E-value=92 Score=20.39 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=60.3
Q ss_pred CCchHHHHHHHhcc-cCCCCCCHHHHHHHHHhCCCCCCChHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhhh
Q 032526 16 DDDAALTEFLSSLM-GYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA---------TQKFVAEVATDALQQCKARQAA 85 (139)
Q Consensus 16 ~~d~~L~efL~~Ld-dY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLA---------aQKFisDIa~DA~q~~kiR~~~ 85 (139)
...+.|.++...+| +-.-.|--.-....|++.|+..++..+.+|+... -..|+.... ...+++..-
T Consensus 15 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~----~~~~~~~~F 90 (182)
T d1y1xa_ 15 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHH----FILSMREGF 90 (182)
T ss_dssp CTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH----HHHHHHHHH
T ss_pred CcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccc----cccccccch
Confidence 34567888887776 4566676666667888899998888888888765 345544322 112222211
Q ss_pred hhhhhhhccccccceeeeHHHHHHHHHHhCcccC
Q 032526 86 VVKDKRDKQQKDKRLILTMEDLSKALREYGVNVK 119 (139)
Q Consensus 86 ~~~~k~~~~~kd~k~vLTmEDL~~AL~EyGInv~ 119 (139)
..-+ +++.-.++.++|..+|.+.|..+.
T Consensus 91 ~~~D------~~~~g~I~~~el~~~l~~~g~~ls 118 (182)
T d1y1xa_ 91 RKRD------SSGDGRLDSNEVRAALLSSGYQVS 118 (182)
T ss_dssp HHHC------TTSSSCBCHHHHHHHHHTTSCCCC
T ss_pred hccc------cccchhhhhHHHHHHHHHhCCchh
Confidence 1111 233346888999999999887654
No 50
>d1mmsa2 d.47.1.1 (A:8-70) Ribosomal protein L11, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.30 E-value=8.2 Score=23.98 Aligned_cols=13 Identities=38% Similarity=0.565 Sum_probs=11.1
Q ss_pred HHHHHHHhCcccC
Q 032526 107 LSKALREYGVNVK 119 (139)
Q Consensus 107 L~~AL~EyGInv~ 119 (139)
|.+||..+|||+.
T Consensus 17 vGpaLG~~GiNi~ 29 (63)
T d1mmsa2 17 VGPALGQHGVNIM 29 (63)
T ss_dssp TTHHHHTTTCCHH
T ss_pred CcchhhhcCcCHH
Confidence 5789999999973
No 51
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.26 E-value=11 Score=22.41 Aligned_cols=25 Identities=8% Similarity=0.061 Sum_probs=20.7
Q ss_pred cceeeeHHHHHHHHHHhCcccCCCC
Q 032526 98 KRLILTMEDLSKALREYGVNVKHQE 122 (139)
Q Consensus 98 ~k~vLTmEDL~~AL~EyGInv~rP~ 122 (139)
+.=.|+.++|..+|..+|+.+...+
T Consensus 33 ~~G~i~~~ef~~~l~~~~~~l~~~e 57 (83)
T d1wlza1 33 KTNTISREEFRAICNRRVQILTDEQ 57 (83)
T ss_dssp CSSCBCHHHHHHHHHHHTCCCCHHH
T ss_pred CCceEChhHHHHHHHHhCCCCChhH
Confidence 3447999999999999999887554
No 52
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.20 E-value=67 Score=18.57 Aligned_cols=50 Identities=12% Similarity=0.093 Sum_probs=39.7
Q ss_pred CCCCchHHHHHHHhcc-cCCCCCCHHHHHHHHHhCCCCCCChHHHHHHHHH
Q 032526 14 RHDDDAALTEFLSSLM-GYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA 63 (139)
Q Consensus 14 ~~~~d~~L~efL~~Ld-dY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiSLA 63 (139)
+...+..|.+....+| +=.=.|+-.=...+|...|+..++..|..|+..+
T Consensus 4 ~~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~ 54 (75)
T d1jc2a_ 4 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDS 54 (75)
T ss_dssp CCCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHh
Confidence 4455678888888887 4577888888999999999999998888776543
No 53
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=22.77 E-value=67 Score=18.39 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=35.6
Q ss_pred CCchHHHHHHHhcc-cCCCCCCHHHHHHHHHhCCCCCCChHHHHHHH
Q 032526 16 DDDAALTEFLSSLM-GYTPTIPDELVEHYLAKSGFQCPDVRLIRLVA 61 (139)
Q Consensus 16 ~~d~~L~efL~~Ld-dY~P~IPD~Vt~yyL~~aGf~~~D~Rv~RLiS 61 (139)
.....|.+....+| +-.=.|.-.=...+|...|...++..+..|+.
T Consensus 6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~ 52 (77)
T d1oqpa_ 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIA 52 (77)
T ss_dssp SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 33556877777787 55668888888899999999999888776654
No 54
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.67 E-value=52 Score=19.41 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=26.5
Q ss_pred HHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 032526 41 EHYLAKSGFQCPDVRLIRLVAVATQKFVAEVAT 73 (139)
Q Consensus 41 ~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~ 73 (139)
..+-++-|.+-.-+-|+-|||-|+|-=+-.++.
T Consensus 13 ~~I~~k~Gl~e~~~dV~~lISHA~QeRLk~lvE 45 (50)
T d1h3oa_ 13 LEIGKKHGITELHPDVVSYVSHATQQRLQNLVE 45 (50)
T ss_dssp HHHHHTTTCCEECTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 345678899988899999999999976665553
No 55
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.92 E-value=95 Score=22.01 Aligned_cols=48 Identities=17% Similarity=0.247 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 032526 38 ELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAV 86 (139)
Q Consensus 38 ~Vt~yyL~~aGf~~~D~Rv~RLiSLAaQKFisDIa~DA~q~~kiR~~~~ 86 (139)
++..-.|...-|+ .-.||+.||.-....+-+.|+...+.|+..|..+.
T Consensus 121 ~ll~eil~~~~F~-d~~Rl~ell~~~~s~~~~~i~~sGh~~A~~~a~s~ 168 (258)
T d2fgea1 121 NLMNCLLQEVQFT-DQQRFKQFVSQSRARMENRLRGSGHGIAAARMDAM 168 (258)
T ss_dssp HHHHHHHHHCCSC-CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCC-cHHHHHHHHHHHHHHHHHhhhcCcHHHHHHHHHhh
Confidence 4556678889995 33789999999999999999999999998887764
No 56
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=21.27 E-value=1.1e+02 Score=22.43 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=39.9
Q ss_pred HHHHHHhCCCCCCChHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhhhhhhhhhccccccceeeeHHHHHHHHHH
Q 032526 40 VEHYLAKSGFQCPDVRLIRLVAVATQKFVA-----EVATDALQQCKARQAAVVKDKRDKQQKDKRLILTMEDLSKALRE 113 (139)
Q Consensus 40 t~yyL~~aGf~~~D~Rv~RLiSLAaQKFis-----DIa~DA~q~~kiR~~~~~~~k~~~~~kd~k~vLTmEDL~~AL~E 113 (139)
..+|-...|+.-+|.-+.+.+.|+ ++|+. |=|-|-+..+=.|... .....++.+++.+|+...+.+
T Consensus 194 ~~~~e~~h~v~~~~~al~~~v~ls-~ryi~~~~~PdKAIdllDea~a~~~~-------~~~~~~~~~i~~~di~~~i~~ 264 (268)
T d1r6bx2 194 KPKYEAHHDVRYTAKAVRAAVELA-VKYINDRHLPDKAIDVIDEAGARARL-------MPVSKRKKTVNVADIESVVAR 264 (268)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHH-HHHCTTSCTTHHHHHHHHHHHHHHHH-------SSSCCCCCSCCHHHHHHHHHH
T ss_pred hHHHhccCCEEeChHHHHHHHHHH-HhhccCCCCCcHHHHHHHHHHHHHHh-------hccccCcccCCHHHHHHHHHH
Confidence 345667789999999999999995 46654 3444444333222110 111233456788999887765
No 57
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=21.08 E-value=52 Score=20.31 Aligned_cols=32 Identities=16% Similarity=0.026 Sum_probs=27.1
Q ss_pred CCCchHHHHHHHhcccCCCCCCHHHHHHHHHh
Q 032526 15 HDDDAALTEFLSSLMGYTPTIPDELVEHYLAK 46 (139)
Q Consensus 15 ~~~d~~L~efL~~LddY~P~IPD~Vt~yyL~~ 46 (139)
.-+...+++.+..=++..=.+|++|.+|+-+|
T Consensus 124 ~ISST~IR~~i~~g~~i~~lvP~~V~~yI~ek 155 (157)
T d1vlha_ 124 FISSSLVKEVALYGGDVTEWVPPEVARALNEK 155 (157)
T ss_dssp TCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHH
T ss_pred eecHHHHHHHHHcCCChhHhcCHHHHHHHHHH
Confidence 45778899999888889999999999998665
No 58
>d2ilka_ a.26.1.3 (A:) Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.96 E-value=29 Score=24.41 Aligned_cols=31 Identities=16% Similarity=0.307 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCC---CCCChHHHHHHHHHHHHHHH
Q 032526 38 ELVEHYLAKSGF---QCPDVRLIRLVAVATQKFVA 69 (139)
Q Consensus 38 ~Vt~yyL~~aGf---~~~D~Rv~RLiSLAaQKFis 69 (139)
++.++||..+ | +..+|.++|-|+-.+++|.+
T Consensus 62 ~lL~FYLe~V-~p~~~~~~~~i~~~v~sLan~f~~ 95 (155)
T d2ilka_ 62 EMIQFYLEEV-MPQAENQDPDIKAHVNSLGENLKT 95 (155)
T ss_dssp HHHHHHHHHT-HHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcccccCCcchhhHHHHHHHHHHH
Confidence 4578999888 7 45789999999888888864
No 59
>d1u55a_ d.278.1.1 (A:) Methyl-accepting chemotaxis protein {Thermoanaerobacter tengcongensis [TaxId: 119072]}
Probab=20.87 E-value=49 Score=23.12 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=25.9
Q ss_pred HHHHHHHHHhCCCCC----------CChHHHHHHHHHHHHH
Q 032526 37 DELVEHYLAKSGFQC----------PDVRLIRLVAVATQKF 67 (139)
Q Consensus 37 D~Vt~yyL~~aGf~~----------~D~Rv~RLiSLAaQKF 67 (139)
++|.+..|.++|++. +|.-+.+|+.-++++-
T Consensus 19 ~e~w~~il~~a~l~~~~~f~~~~~Y~D~~~~~Lv~a~s~~~ 59 (188)
T d1u55a_ 19 NDVVDESLKSVGWEPDRVITPLEDIDDDEVRRIFAKVSEKT 59 (188)
T ss_dssp HHHHHHHHHHTTCCTTCCCCTTCBCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCeeecCCccCHHHHHHHHHHHHHHH
Confidence 689999999998753 6889999999988764
No 60
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=20.56 E-value=23 Score=21.68 Aligned_cols=17 Identities=35% Similarity=0.563 Sum_probs=14.4
Q ss_pred HHHHHHHHHHhCcccCC
Q 032526 104 MEDLSKALREYGVNVKH 120 (139)
Q Consensus 104 mEDL~~AL~EyGInv~r 120 (139)
+-+++..|+++||||..
T Consensus 25 la~I~~~l~~~~iNI~~ 41 (84)
T d1sc6a3 25 LTALNKIFAEQGVNIAA 41 (84)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCHHH
Confidence 45789999999999964
Done!