STRING 9.05 
  emb2731 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
emb2731
emb2731 (embryo defective 2731); embryo defective 2731 (emb2731); FUNCTIONS IN- molecular_function unknown; INVOLVED IN- embryonic development ending in seed dormancy; LOCATED IN- endoplasmic reticulum; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Uncharacterised protein family UPF0172 (InterPro-IPR005366); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G51620.3); Has 220 Blast hits to 219 proteins in 84 species- Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 10; Plants - 30; Viruses - 0; Other Eukaryotes - 4 [...] (208 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
emb2735
emb2735 (embryo defective 2735); embryo defective 2735 (emb2735); FUNCTIONS IN- molecular_funct [...] (162 aa)
       0.821
emb1513
emb1513 (embryo defective 1513); copper ion transmembrane transporter; embryo defective 1513 (e [...] (251 aa)
       0.821
emb2170
emb2170 (embryo defective 2170); embryo defective 2170 (emb2170); FUNCTIONS IN- molecular_funct [...] (248 aa)
       0.821
EMB2743
EMB2743 (EMBRYO DEFECTIVE 2743); EMBRYO DEFECTIVE 2743 (EMB2743); FUNCTIONS IN- molecular_funct [...] (103 aa)
       0.788
MIRO1
MIRO1 (Miro-related GTP-ase 1); GTP binding; Encodes a protein with similarity to GTPases that [...] (648 aa)
       0.659
AT2G37120
DNA-binding S1FA family protein; DNA-binding S1FA family protein; FUNCTIONS IN- DNA binding; IN [...] (76 aa)
       0.573
AT1G51630
unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (423 aa)
       0.546
AT1G74280
hydrolase, alpha/beta fold family protein; hydrolase, alpha/beta fold family protein; FUNCTIONS [...] (372 aa)
       0.538
AT5G24760
alcohol dehydrogenase, putative; alcohol dehydrogenase, putative; FUNCTIONS IN- oxidoreductase [...] (381 aa)
       0.537
AT5G49830
unknown protein; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAIN [...] (814 aa)
       0.526
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (46%)
Permalink