BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032532
MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL
KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII
VQGRSSKSTKVGDIMTEEV

High Scoring Gene Products

Symbol, full name Information P value
CBSX3
AT5G10860
protein from Arabidopsis thaliana 3.7e-55
AT1G47271 protein from Arabidopsis thaliana 8.4e-26
PSPPH_2494
CBS domain protein
protein from Pseudomonas syringae pv. phaseolicola 1448A 1.1e-09
MCA0583
CBS domain protein
protein from Methylococcus capsulatus str. Bath 1.3e-06
HNE_2660
CBS domain protein
protein from Hyphomonas neptunium ATCC 15444 2.6e-05
BAS0687
CBS domain protein
protein from Bacillus anthracis 9.5e-05
BA_0720
CBS domain protein
protein from Bacillus anthracis str. Ames 9.5e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032532
        (139 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2183740 - symbol:CBSX3 "AT5G10860" species:370...   569  3.7e-55   1
TAIR|locus:4515102654 - symbol:AT1G47271 "AT1G47271" spec...   292  8.4e-26   1
UNIPROTKB|Q48IU0 - symbol:PSPPH_2494 "CBS domain protein"...   140  1.1e-09   1
UNIPROTKB|Q60B97 - symbol:MCA0583 "CBS domain protein" sp...   111  1.3e-06   1
UNIPROTKB|Q0BYV1 - symbol:HNE_2660 "CBS domain protein" s...    99  2.6e-05   1
UNIPROTKB|Q81UY6 - symbol:BAS0687 "CBS domain protein" sp...    96  9.5e-05   1
TIGR_CMR|BA_0720 - symbol:BA_0720 "CBS domain protein" sp...    96  9.5e-05   1


>TAIR|locus:2183740 [details] [associations]
            symbol:CBSX3 "AT5G10860" species:3702 "Arabidopsis
            thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IEP;RCA] [GO:0050897 "cobalt ion
            binding" evidence=IDA] [GO:0045454 "cell redox homeostasis"
            evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006833
            "water transport" evidence=RCA] [GO:0006972 "hyperosmotic response"
            evidence=RCA] [GO:0007030 "Golgi organization" evidence=RCA]
            [GO:0009266 "response to temperature stimulus" evidence=RCA]
            [GO:0046686 "response to cadmium ion" evidence=RCA]
            InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
            GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009651
            eggNOG:COG0517 GO:GO:0050897 GO:GO:0045454 EMBL:AL365234
            EMBL:AF361845 EMBL:AY066046 IPI:IPI00520382 PIR:T50795
            RefSeq:NP_196647.1 UniGene:At.28210 ProteinModelPortal:Q9LEV3
            SMR:Q9LEV3 STRING:Q9LEV3 PaxDb:Q9LEV3 PRIDE:Q9LEV3 ProMEX:Q9LEV3
            EnsemblPlants:AT5G10860.1 GeneID:830953 KEGG:ath:AT5G10860
            GeneFarm:1947 TAIR:At5g10860 HOGENOM:HOG000187909 InParanoid:Q9LEV3
            OMA:ERMTDRR PhylomeDB:Q9LEV3 ProtClustDB:CLSN2686434
            Genevestigator:Q9LEV3 GermOnline:AT5G10860 Uniprot:Q9LEV3
        Length = 206

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 110/139 (79%), Positives = 125/139 (89%)

Query:     1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
             MQG I+SF+S GN+VK +VLQ +R++NP ++P V  SR ES   ARMEE GFESTTISD+
Sbjct:     1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60

Query:    60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
             +K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct:    61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120

Query:   120 IVQGRSSKSTKVGDIMTEE 138
             IVQGRSSKSTKVGDIMTEE
Sbjct:   121 IVQGRSSKSTKVGDIMTEE 139


>TAIR|locus:4515102654 [details] [associations]
            symbol:AT1G47271 "AT1G47271" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0003824 Gene3D:3.20.20.70
            eggNOG:COG0517 GO:GO:0008152 HOGENOM:HOG000187909 EMBL:AC079677
            IPI:IPI00891494 RefSeq:NP_001117443.1 UniGene:At.69452
            ProteinModelPortal:B3H6Z2 SMR:B3H6Z2 PRIDE:B3H6Z2
            EnsemblPlants:AT1G47271.1 GeneID:6241044 KEGG:ath:AT1G47271
            TAIR:At1g47271 OMA:NILRAME PhylomeDB:B3H6Z2 ProtClustDB:CLSN2925454
            Genevestigator:B3H6Z2 Uniprot:B3H6Z2
        Length = 193

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 58/120 (48%), Positives = 86/120 (71%)

Query:    19 VLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDD 78
             +L R   V  + +  VS+ F  ++S    E G E+ T++D+L  K    D +W+ C T+D
Sbjct:     8 LLARANEVPKIHQRKVSAGFGCLTSPPPPEKGLENLTVADVLSTKDTDID-TWISCRTND 66

Query:    79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
             TV DAVK+M +HN+G+LVV++PG+Q+ +AGI+TERDY++KII  GRSSK TKVG++MT+E
Sbjct:    67 TVSDAVKNMAKHNIGSLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDE 126


>UNIPROTKB|Q48IU0 [details] [associations]
            symbol:PSPPH_2494 "CBS domain protein" species:264730
            "Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371
            SMART:SM00116 eggNOG:COG0517 EMBL:CP000058
            GenomeReviews:CP000058_GR HOGENOM:HOG000187909 RefSeq:YP_274691.1
            ProteinModelPortal:Q48IU0 STRING:Q48IU0 GeneID:3557460
            KEGG:psp:PSPPH_2494 PATRIC:19974275 OMA:YARKVIL
            ProtClustDB:CLSK865716 Uniprot:Q48IU0
        Length = 146

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 30/63 (47%), Positives = 43/63 (68%)

Query:    77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
             D  V DA++ M + N+GAL VV   E   V G+++ERDY RK+I++GRSS  T V +IM+
Sbjct:    24 DQMVLDALRLMAEKNIGALPVV---EGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80

Query:   137 EEV 139
              +V
Sbjct:    81 NKV 83


>UNIPROTKB|Q60B97 [details] [associations]
            symbol:MCA0583 "CBS domain protein" species:243233
            "Methylococcus capsulatus str. Bath" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000644 InterPro:IPR013785 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 GO:GO:0003824 Gene3D:3.20.20.70
            GO:GO:0008152 EMBL:AE017282 GenomeReviews:AE017282_GR
            HOGENOM:HOG000187907 RefSeq:YP_113099.1 ProteinModelPortal:Q60B97
            GeneID:3103691 KEGG:mca:MCA0583 PATRIC:22604930 OMA:LMRTHHV
            ProtClustDB:CLSK747154 Uniprot:Q60B97
        Length = 150

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 24/64 (37%), Positives = 41/64 (64%)

Query:    77 DDTVYDAVKSMTQHNVGALVVVKPGEQK-SVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
             DDT+ +A K M  H+VG++VVV+  E      GI+T+RD + +I+ +  +  +  VGD+M
Sbjct:    17 DDTIVEAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLVVEILAEEVAPDAVTVGDVM 76

Query:   136 TEEV 139
             + E+
Sbjct:    77 SFEL 80


>UNIPROTKB|Q0BYV1 [details] [associations]
            symbol:HNE_2660 "CBS domain protein" species:228405
            "Hyphomonas neptunium ATCC 15444" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
            eggNOG:COG0517 EMBL:CP000158 GenomeReviews:CP000158_GR
            HOGENOM:HOG000187909 OMA:ERMTDRR RefSeq:YP_761342.1
            ProteinModelPortal:Q0BYV1 STRING:Q0BYV1 GeneID:4287219
            KEGG:hne:HNE_2660 PATRIC:32218185
            BioCyc:HNEP228405:GI69-2670-MONOMER Uniprot:Q0BYV1
        Length = 144

 Score = 99 (39.9 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 26/85 (30%), Positives = 44/85 (51%)

Query:    56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERD 114
             I  IL  KG+      +    DDT+ +A + + +  +GA+V +   GE   + G+++ERD
Sbjct:     3 IEQILNDKGREV----ITLRADDTLREAARLLDERRIGAVVTLDADGE---IVGVLSERD 55

Query:   115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
              +R+   QG  +    VG+ MT  V
Sbjct:    56 IVRQFARQGEGALDMPVGNAMTRAV 80


>UNIPROTKB|Q81UY6 [details] [associations]
            symbol:BAS0687 "CBS domain protein" species:1392 "Bacillus
            anthracis" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000644
            Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            HOGENOM:HOG000187907 RefSeq:NP_843245.1 RefSeq:YP_017353.1
            RefSeq:YP_026963.1 ProteinModelPortal:Q81UY6 DNASU:1088314
            EnsemblBacteria:EBBACT00000011885 EnsemblBacteria:EBBACT00000014035
            EnsemblBacteria:EBBACT00000021909 GeneID:1088314 GeneID:2820041
            GeneID:2847914 KEGG:ban:BA_0720 KEGG:bar:GBAA_0720 KEGG:bat:BAS0687
            OMA:STHIVHC ProtClustDB:CLSK915937
            BioCyc:BANT260799:GJAJ-767-MONOMER
            BioCyc:BANT261594:GJ7F-794-MONOMER Uniprot:Q81UY6
        Length = 139

 Score = 96 (38.9 bits), Expect = 9.5e-05, P = 9.5e-05
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:    74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
             CT  D VY+A   M + ++G + VV   E + V G++T+RD    ++V+G + K   S K
Sbjct:    15 CTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGSNK 67

Query:   131 VGDIMTEEV 139
             + ++MT  +
Sbjct:    68 ITNVMTTNI 76


>TIGR_CMR|BA_0720 [details] [associations]
            symbol:BA_0720 "CBS domain protein" species:198094
            "Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
            HOGENOM:HOG000187907 RefSeq:NP_843245.1 RefSeq:YP_017353.1
            RefSeq:YP_026963.1 ProteinModelPortal:Q81UY6 DNASU:1088314
            EnsemblBacteria:EBBACT00000011885 EnsemblBacteria:EBBACT00000014035
            EnsemblBacteria:EBBACT00000021909 GeneID:1088314 GeneID:2820041
            GeneID:2847914 KEGG:ban:BA_0720 KEGG:bar:GBAA_0720 KEGG:bat:BAS0687
            OMA:STHIVHC ProtClustDB:CLSK915937
            BioCyc:BANT260799:GJAJ-767-MONOMER
            BioCyc:BANT261594:GJ7F-794-MONOMER Uniprot:Q81UY6
        Length = 139

 Score = 96 (38.9 bits), Expect = 9.5e-05, P = 9.5e-05
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query:    74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
             CT  D VY+A   M + ++G + VV   E + V G++T+RD    ++V+G + K   S K
Sbjct:    15 CTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGSNK 67

Query:   131 VGDIMTEEV 139
             + ++MT  +
Sbjct:    68 ITNVMTTNI 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.361    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      139       139   0.00091  102 3  11 22  0.45    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  119 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.97u 0.15s 13.12t   Elapsed:  00:00:01
  Total cpu time:  12.97u 0.15s 13.12t   Elapsed:  00:00:01
  Start:  Mon May 20 18:29:35 2013   End:  Mon May 20 18:29:36 2013

Back to top