BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032532
(139 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357491621|ref|XP_003616098.1| Cbs domain protein [Medicago truncatula]
gi|355517433|gb|AES99056.1| Cbs domain protein [Medicago truncatula]
Length = 205
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 132/138 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 158 VQGRSSKSTKVGDIMTEE 175
>gi|357491617|ref|XP_003616096.1| Cbs domain protein [Medicago truncatula]
gi|355517431|gb|AES99054.1| Cbs domain protein [Medicago truncatula]
Length = 242
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 132/138 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 38 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 97
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 98 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 157
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 158 VQGRSSKSTKVGDIMTEE 175
>gi|357491619|ref|XP_003616097.1| Cbs domain protein [Medicago truncatula]
gi|355517432|gb|AES99055.1| Cbs domain protein [Medicago truncatula]
Length = 254
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 132/138 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 50 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 109
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 110 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 169
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 170 VQGRSSKSTKVGDIMTEE 187
>gi|357491615|ref|XP_003616095.1| Cbs domain protein [Medicago truncatula]
gi|217073214|gb|ACJ84966.1| unknown [Medicago truncatula]
gi|355517430|gb|AES99053.1| Cbs domain protein [Medicago truncatula]
gi|388522955|gb|AFK49539.1| unknown [Medicago truncatula]
Length = 205
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 132/138 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS+GN++K+AVLQR+R+VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSNGNVIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVKPGE+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/138 (84%), Positives = 132/138 (95%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++ L+HGN+VK ++LQ +R+++P+LRP+V SRFESVSSAR+EEHGFEST I+DIL
Sbjct: 1 MQGALRACLTHGNVVKDSLLQHVRVLSPLLRPIVFSRFESVSSARIEEHGFESTRIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KEKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|351722175|ref|NP_001236211.1| uncharacterized protein LOC100527191 [Glycine max]
gi|255631750|gb|ACU16242.1| unknown [Glycine max]
Length = 205
Score = 248 bits (633), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/138 (83%), Positives = 129/138 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG QSFLSHGN++++AVLQR+R+VNP+L+P+VSSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGFQSFLSHGNVIRNAVLQRVRMVNPLLQPIVSSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++AGIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|225434277|ref|XP_002262902.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 1 [Vitis vinifera]
gi|225434279|ref|XP_002262927.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 2 [Vitis vinifera]
gi|225434281|ref|XP_002262956.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
isoform 3 [Vitis vinifera]
Length = 205
Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/138 (84%), Positives = 129/138 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 1 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|297745725|emb|CBI15781.3| unnamed protein product [Vitis vinifera]
Length = 262
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 116/138 (84%), Positives = 129/138 (93%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ +SHG+IVK+AVL +IRLVNP++ VV SR +SV+SARMEEHGFESTTI+D+L
Sbjct: 58 MQGAIQAIVSHGSIVKNAVLHQIRLVNPIMPSVVFSRLQSVTSARMEEHGFESTTIADVL 117
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDD+VYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 118 KGKGKSADGSWLWCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKII 177
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 178 VQGRSSKSTKVGDIMTEE 195
>gi|388511535|gb|AFK43829.1| unknown [Lotus japonicus]
Length = 205
Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/138 (80%), Positives = 130/138 (94%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG +++ S GN++K+AVLQ++R+VNP+L+PV SR+ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGGMRAIFSRGNVIKNAVLQQVRMVNPLLKPVAFSRYESVSPARIEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KAKGKGADGSWLWCTT+DTVY+AVKSMTQ+NVGALVVVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KAKGKGADGSWLWCTTEDTVYEAVKSMTQNNVGALVVVKPAEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|449444316|ref|XP_004139921.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 1 [Cucumis sativus]
gi|449444318|ref|XP_004139922.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 206
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 127/139 (91%), Gaps = 1/139 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFESTTI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESTTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEE 138
IVQGRSSKSTKVGDIMTEE
Sbjct: 121 IVQGRSSKSTKVGDIMTEE 139
>gi|351727132|ref|NP_001237662.1| uncharacterized protein LOC100306364 [Glycine max]
gi|255628307|gb|ACU14498.1| unknown [Glycine max]
Length = 206
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/138 (80%), Positives = 127/138 (92%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLSHGN++++AVLQR+R+VNP+L+ + SSRFESV+ AR+EEHGFESTTISDIL
Sbjct: 1 MQGGMRSFLSHGNVIRNAVLQRVRMVNPLLQTIASSRFESVTPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
KGKGADGSWLWCTTDDTVYDAVKSMTQ+NVGALVVVK K++ GIITERDYLRKII
Sbjct: 61 NDKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|449475831|ref|XP_004154564.1| PREDICTED: LOW QUALITY PROTEIN: CBS domain-containing protein
CBSX3, mitochondrial-like [Cucumis sativus]
Length = 206
Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/139 (81%), Positives = 126/139 (90%), Gaps = 1/139 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFE-SVSSARMEEHGFESTTISDI 59
MQGA++SFLSHGN+VK+AVLQ+IR+ NP +RP + SRF S SSA +EEHGFES TI DI
Sbjct: 1 MQGAVRSFLSHGNVVKTAVLQQIRVANPHMRPAMLSRFSTSASSANIEEHGFESXTIDDI 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LKAKGK ADGSWLWCTT+D+VYDAV+SMTQHNVGALVVVKP EQ S+AGIITERDYLRKI
Sbjct: 61 LKAKGKSADGSWLWCTTEDSVYDAVQSMTQHNVGALVVVKPAEQNSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEE 138
IVQGRSSKSTKVGDIMTEE
Sbjct: 121 IVQGRSSKSTKVGDIMTEE 139
>gi|346465295|gb|AEO32492.1| hypothetical protein [Amblyomma maculatum]
Length = 159
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/138 (81%), Positives = 126/138 (91%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ SHGN+++ AVL+ +R++NP +RP + SR ESVSSAR+EEHGFESTTISDI+
Sbjct: 1 MQGAIQAIQSHGNVLRHAVLRHVRVLNPTMRPTIFSRSESVSSARLEEHGFESTTISDIM 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKP +KSVAGIITERDYLRKII
Sbjct: 61 KLKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPDGEKSVAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/138 (81%), Positives = 127/138 (92%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA+++FL+HGN+VK ++ Q +R+ +P+LRPVV SRFESVSSA +EE GFESTTI+DIL
Sbjct: 1 MQGALRTFLTHGNVVKDSLFQHLRVSSPVLRPVVFSRFESVSSAPIEETGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMT HNVGALVVVK GEQ+S+AGIITERDYLRKII
Sbjct: 61 KEKGKNADGSWLWCTTDDTVYDAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
Length = 206
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 125/139 (89%), Gaps = 1/139 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLV-NPMLRPVVSSRFESVSSARMEEHGFESTTISDI 59
M A+ +FLS GN++K+AVLQ R+V NP LRP+V SRFESVSSARMEE FESTTI+D+
Sbjct: 1 MNRAVNAFLSRGNLIKNAVLQHARVVANPGLRPIVFSRFESVSSARMEEQSFESTTIADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
LK KGK ADGSWLWCTT+DTVYDAVKSMT HNVGALVVVKPGEQKS+AGIITERDYLRKI
Sbjct: 61 LKGKGKSADGSWLWCTTEDTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEE 138
IVQGRSSKSTKVGDIMTEE
Sbjct: 121 IVQGRSSKSTKVGDIMTEE 139
>gi|15238284|ref|NP_196647.1| CBS domain-containing protein [Arabidopsis thaliana]
gi|20455364|sp|Q9LEV3.1|CBSX3_ARATH RecName: Full=CBS domain-containing protein CBSX3, mitochondrial;
Flags: Precursor
gi|13605728|gb|AAK32857.1|AF361845_1 AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|8979720|emb|CAB96841.1| putative protein [Arabidopsis thaliana]
gi|17978887|gb|AAL47413.1| AT5g10860/T30N20_130 [Arabidopsis thaliana]
gi|332004220|gb|AED91603.1| CBS domain-containing protein [Arabidopsis thaliana]
Length = 206
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/139 (79%), Positives = 125/139 (89%), Gaps = 1/139 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEE 138
IVQGRSSKSTKVGDIMTEE
Sbjct: 121 IVQGRSSKSTKVGDIMTEE 139
>gi|118162023|gb|ABK64186.1| CBS domain-containing protein [Solenostemon scutellarioides]
Length = 202
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/138 (80%), Positives = 122/138 (88%), Gaps = 3/138 (2%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG IQ+ S G K+AVLQ +R+V P +R ++ R ES S+ARMEEHGFESTTISD+L
Sbjct: 1 MQGGIQAIFSRG---KNAVLQHVRVVPPAMRALMFPRHESTSAARMEEHGFESTTISDVL 57
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
AKGKGADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPGEQKS+AGIITERDYLRKII
Sbjct: 58 TAKGKGADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKII 117
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 118 VQGRSSKSTKVGDIMTEE 135
>gi|47027028|gb|AAT08729.1| CBS1 [Hyacinthus orientalis]
Length = 203
Score = 228 bits (580), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 119/127 (93%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSW 71
GN+++ AVLQ +R++NP RPV+ SR ESVSSAR+EEHGFESTT+SD+LK+KGK ADGSW
Sbjct: 10 GNVLRRAVLQHVRVINPAFRPVIFSRSESVSSARLEEHGFESTTVSDVLKSKGKSADGSW 69
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
LWCTTDD+VYDAVKSMTQHNVGALVVVKPGE+K +AGIITERDYLRKIIVQGRSSKSTKV
Sbjct: 70 LWCTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTKV 129
Query: 132 GDIMTEE 138
GDIMTEE
Sbjct: 130 GDIMTEE 136
>gi|297811195|ref|XP_002873481.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319318|gb|EFH49740.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/139 (76%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDI 59
MQ ++S +S GN+VK++VLQ +R++NP ++P V SR ES ARMEE GFESTTISD+
Sbjct: 1 MQAVVRSLVSGGNVVKASVLQHLRVINPAIQPSVFCSRSESTQPARMEETGFESTTISDV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+ +AGIITERDYLRKI
Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQVLAGIITERDYLRKI 120
Query: 120 IVQGRSSKSTKVGDIMTEE 138
IVQGRSSKSTKVGDIMTEE
Sbjct: 121 IVQGRSSKSTKVGDIMTEE 139
>gi|257209009|emb|CBB36473.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/138 (76%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P V SRF SVSSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAVFSRFMSVSSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|116782877|gb|ABK22702.1| unknown [Picea sitchensis]
Length = 205
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/138 (76%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EEHGFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEEHGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSK+TKVGDIMTEE
Sbjct: 121 VQGRSSKTTKVGDIMTEE 138
>gi|257209020|emb|CBB36496.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
[Saccharum hybrid cultivar R570]
Length = 205
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 119/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHG+++K AVLQ I P + P V SRF S SSAR+E+ GFE+ T+SD+L
Sbjct: 1 MQRAVQAVRSHGSVLKYAVLQHISAPKPAMLPAVFSRFMSASSARLEDSGFETATVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|116781417|gb|ABK22092.1| unknown [Picea sitchensis]
Length = 205
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 119/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSK+TKVGDIMTEE
Sbjct: 121 VQGRSSKTTKVGDIMTEE 138
>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
gi|194708182|gb|ACF88175.1| unknown [Zea mays]
gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
gi|414872655|tpg|DAA51212.1| TPA: CBS domain protein isoform 1 [Zea mays]
gi|414872656|tpg|DAA51213.1| TPA: CBS domain protein isoform 2 [Zea mays]
gi|414872657|tpg|DAA51214.1| TPA: CBS domain protein isoform 3 [Zea mays]
Length = 205
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/138 (73%), Positives = 119/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|357116495|ref|XP_003560016.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/138 (76%), Positives = 121/138 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVLQ + + P + P V SR SVSSA++EE GFES T++DIL
Sbjct: 1 MQRAIQAIGSHGSMLKSAVLQHVSVAKPAMLPAVFSRSMSVSSAQIEESGFESGTVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|224285803|gb|ACN40616.1| unknown [Picea sitchensis]
Length = 205
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/138 (74%), Positives = 119/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGA++S HG I K+++LQ +R+ P R + +R ESVS AR+EE GFESTTI+DIL
Sbjct: 1 MQGALRSIQLHGGIFKNSILQHLRVAEPSFRSKIIARHESVSPARLEESGFESTTIADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K KGK ADGSWLWCTTDDTVYDAVKSMTQH+VGAL+VVKP E+KS+AGIITERDYLRKII
Sbjct: 61 KGKGKSADGSWLWCTTDDTVYDAVKSMTQHDVGALLVVKPVEEKSIAGIITERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSK+TKVGDIMTEE
Sbjct: 121 VQGRSSKTTKVGDIMTEE 138
>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
Length = 233
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 29 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 88
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 89 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 148
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 149 VQGRSSKSTKVGDIMTEE 166
>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
gi|301087459|gb|ADK60921.1| CBSX4 [Oryza sativa Indica Group]
Length = 205
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 1 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 61 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 120
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 121 VQGRSSKSTKVGDIMTEE 138
>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
Length = 867
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 663 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 722
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 723 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 782
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 783 VQGRSSKSTKVGDIMTEE 800
>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 230
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/138 (75%), Positives = 120/138 (86%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ AIQ+ SHG+++KSAVL+ I P + P V SR SVSSA++EE GFE+ T++DIL
Sbjct: 26 MQRAIQAIGSHGSLLKSAVLRHISAPKPSILPAVYSRSMSVSSAQIEESGFETATVADIL 85
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
K+KGK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKII
Sbjct: 86 KSKGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKII 145
Query: 121 VQGRSSKSTKVGDIMTEE 138
VQGRSSKSTKVGDIMTEE
Sbjct: 146 VQGRSSKSTKVGDIMTEE 163
>gi|357491601|ref|XP_003616088.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517423|gb|AES99046.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 110/133 (82%), Gaps = 2/133 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQG ++SFLS N++K+AVLQR+ +VNP+L+PV SRFES + AR+EEHGFESTTISDIL
Sbjct: 1 MQGGLRSFLSDRNVIKNAVLQRVCMVNPLLQPVAFSRFESATPARIEEHGFESTTISDIL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
+ KGKGADGS LWCTTDDTVYDAVKSMTQ+N GALVVVKPGE+KS+AGIITER+ K++
Sbjct: 61 QGKGKGADGSRLWCTTDDTVYDAVKSMTQNNAGALVVVKPGEEKSIAGIITERE--DKVV 118
Query: 121 VQGRSSKSTKVGD 133
+ R + D
Sbjct: 119 INWRRKRKLSFSD 131
>gi|18266206|gb|AAL67493.1|AF459408_1 senescence-associated putative protein, partial [Narcissus
pseudonarcissus]
Length = 109
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 99/109 (90%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQGAIQ+ LS GN++K AVLQ +R++NP L+P + SR ESVSSA++EEHGFESTT+SD+L
Sbjct: 1 MQGAIQAILSRGNVLKRAVLQHVRIINPALQPSILSRSESVSSAQLEEHGFESTTVSDVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
K+KGK ADGSWLWCTT+DTVYDAVKSMTQHNVGALVVVKPGE+K +AGI
Sbjct: 61 KSKGKSADGSWLWCTTEDTVYDAVKSMTQHNVGALVVVKPGEEKGIAGI 109
>gi|167999412|ref|XP_001752411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696311|gb|EDQ82650.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 107/141 (75%), Gaps = 3/141 (2%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR---MEEHGFESTTIS 57
MQG ++ + G + VLQ +R+ +R+ES + +EEHGFESTTIS
Sbjct: 1 MQGLVRLVQAQGKALPGIVLQHVRVGGSGFGSGFQTRWESGQAKAKEGLEEHGFESTTIS 60
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
DILK KG+ ADGSWLWC+ DDTVYDAVKSMT +NVGAL+VVK G +K++AGIITERDYLR
Sbjct: 61 DILKEKGRNADGSWLWCSVDDTVYDAVKSMTANNVGALLVVKSGTEKTLAGIITERDYLR 120
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
KIIVQGRSSK+TKVGDIMTEE
Sbjct: 121 KIIVQGRSSKTTKVGDIMTEE 141
>gi|53771902|gb|AAU93534.1| unknown protein [Zea mays]
gi|414872653|tpg|DAA51210.1| TPA: putative uncharacterized protein adh1F [Zea mays]
Length = 286
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 118/219 (53%), Gaps = 81/219 (36%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERD--------------------------------- 114
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTERGDEQISVLLASNFWPVAVHHSTFGIKESQLFRAL 180
Query: 115 ---------------YLRKIIVQGRSSKSTKVGDIMTEE 138
YLRKIIVQGRSSKSTKVGDIMTEE
Sbjct: 181 YSRYNRNCIKLKYTYYLRKIIVQGRSSKSTKVGDIMTEE 219
>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
Length = 236
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 108/140 (77%), Gaps = 3/140 (2%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILKAKGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKAKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEE 138
IIVQGRSSK+TKVGDIMTEE
Sbjct: 120 IIVQGRSSKTTKVGDIMTEE 139
>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
Length = 236
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 107/140 (76%), Gaps = 3/140 (2%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFES--VSSARMEEHGFESTTISD 58
MQ + + G + + +L+ +R+ R + R+ES + +EEHGFESTTI D
Sbjct: 1 MQSVAGALRAQGRVAQQGILKHLRVAATNDRFQLP-RWESSVAKPSSLEEHGFESTTIED 59
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK KGK ADGSWL+C+TDDTVY+AV+SMT HNVGAL+VVK GE+ ++AGIITERDYLRK
Sbjct: 60 ILKGKGKSADGSWLFCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRK 119
Query: 119 IIVQGRSSKSTKVGDIMTEE 138
IIVQGRSSK+TKVGDIMTEE
Sbjct: 120 IIVQGRSSKTTKVGDIMTEE 139
>gi|238007630|gb|ACR34850.1| unknown [Zea mays]
gi|414872654|tpg|DAA51211.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 150
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
K+KGK ADGSWLWCTT+D+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTER 113
>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 100/129 (77%), Gaps = 3/129 (2%)
Query: 13 NIVKSAVLQRIRLVNPMLRPVVSSRFES---VSSARMEEHGFESTTISDILKAKGKGADG 69
+++ VLQ +R+ +R E+ + +EEHGFESTTI+DILK KG+ ADG
Sbjct: 13 SVLSRCVLQHVRVGGGAFSFGSQTRKETGQATTKESLEEHGFESTTIADILKEKGQQADG 72
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
SWLWC+ DDTVYDAVKSMT HNVGAL+VVK G +K +AGIITERDYLRKIIVQGRSSK+T
Sbjct: 73 SWLWCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTT 132
Query: 130 KVGDIMTEE 138
KVGDIMTEE
Sbjct: 133 KVGDIMTEE 141
>gi|357491603|ref|XP_003616089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517424|gb|AES99047.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 552
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 73/89 (82%), Positives = 82/89 (92%)
Query: 25 LVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAV 84
+VNP+L+PV SRFES + AR+EEHGFESTTISDIL+ KGKGADGS LWCTTDDTVYDAV
Sbjct: 1 MVNPLLQPVAFSRFESATPARIEEHGFESTTISDILQGKGKGADGSRLWCTTDDTVYDAV 60
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITER 113
KSMTQ+N GALVVVKPGE+KS+AGIITER
Sbjct: 61 KSMTQNNAGALVVVKPGEEKSIAGIITER 89
>gi|414872652|tpg|DAA51209.1| TPA: hypothetical protein ZEAMMB73_541993 [Zea mays]
Length = 196
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 94/146 (64%), Gaps = 33/146 (22%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDIL 60
MQ A+Q+ SHGN++K AVLQ I P + P SRF SVSSAR+E+ GFE+ T++D+L
Sbjct: 1 MQRAVQAVRSHGNVLKYAVLQHISAPKPAMLPAAFSRFMSVSSARLEDRGFETATVADVL 60
Query: 61 KAKGKGADGSWLWCTTDDTVYDAVKS---------------------------------M 87
K+KGK ADGSWLWCTT+D+VYDAVKS M
Sbjct: 61 KSKGKSADGSWLWCTTEDSVYDAVKSVCPHFPMIVLTPSESMVMHQMIRLPFGTLNFLQM 120
Query: 88 TQHNVGALVVVKPGEQKSVAGIITER 113
TQHNVGALVVVKPG+ KS+AGI+TER
Sbjct: 121 TQHNVGALVVVKPGQNKSIAGIVTER 146
>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
Length = 143
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 74/76 (97%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQ
Sbjct: 1 RGKSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQ 60
Query: 123 GRSSKSTKVGDIMTEE 138
GRSSKSTKVGDIMTEE
Sbjct: 61 GRSSKSTKVGDIMTEE 76
>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
Length = 141
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/74 (91%), Positives = 72/74 (97%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K ADGSWLWCTTDD+VYDAVKSMTQHNVGALVVVKPG+ KS+AGI+TERDYLRKIIVQGR
Sbjct: 1 KSADGSWLWCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGR 60
Query: 125 SSKSTKVGDIMTEE 138
SSKSTKVGDIMTEE
Sbjct: 61 SSKSTKVGDIMTEE 74
>gi|225458255|ref|XP_002281327.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial
[Vitis vinifera]
Length = 207
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSAR--MEEHGFESTTISD 58
MQG ++ S +K A+LQ + R V SR E V+++ ME+ G E+TT+++
Sbjct: 1 MQGIGRATRSCQETLKLAILQHCHGRSTAGRKNVFSRHECVTTSNPTMEQKGLENTTVAE 60
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
+L KG+ GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RK
Sbjct: 61 VLMTKGEEKSGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRK 120
Query: 119 IIVQGRSSKSTKVGDIMTEE 138
II GRSSK TKVG+IMT+E
Sbjct: 121 IIAHGRSSKDTKVGEIMTDE 140
>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 100/139 (71%), Gaps = 6/139 (4%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
M+G ++ S ++ A+L+ +P R + SRF V SS + E G E+ T++D+
Sbjct: 1 MEGLVRGIRSCQETLRVAILK-----HPRDRREIFSRFGRVTSSLPVREKGLENLTVADV 55
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG+ GSWLWC T D+VYDAV++M ++N+G+LVV+KPGEQ+ +AGIITERDY+RKI
Sbjct: 56 LMTKGEDKIGSWLWCRTTDSVYDAVENMAKNNIGSLVVLKPGEQELIAGIITERDYMRKI 115
Query: 120 IVQGRSSKSTKVGDIMTEE 138
I QGRSSK T+VG+IMT+E
Sbjct: 116 IAQGRSSKYTRVGEIMTDE 134
>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 97/144 (67%), Gaps = 13/144 (9%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRF------ESVSSARMEEHGFEST 54
MQG +Q S ++ A+L+ +P +R ++ R SS + E G E+
Sbjct: 1 MQGLVQGVRSCQETLRVAILR-----HPHVRDIIERRKILSHSGCVTSSPPVGEKGLENL 55
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D+L KG+ GSWLWC T DTVYDAVK+M Q+N+G+LVV+ GE++ +AGIITERD
Sbjct: 56 TVADVLVTKGEEKLGSWLWCRTTDTVYDAVKNMAQNNIGSLVVL--GERELIAGIITERD 113
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
YLRKII QGRSSK T+VG+IMT+E
Sbjct: 114 YLRKIIAQGRSSKYTRVGEIMTDE 137
>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
Length = 205
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 92/139 (66%), Gaps = 2/139 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDI 59
MQG I+ S I+K + R + SRF V SS + + G E+ T++D+
Sbjct: 1 MQGLIRGVRSCKEILKIGTQRHSHGKEIFERKNIFSRFGCVTSSPSLPQKGLENLTVADV 60
Query: 60 LKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
L KG GSWLWC ++DTVYDAVK+M ++N+G+L+V+KPGE K +AGIITERDYLRK+
Sbjct: 61 LMTKGDEKTGSWLWCHSNDTVYDAVKNMAENNIGSLLVLKPGE-KHLAGIITERDYLRKV 119
Query: 120 IVQGRSSKSTKVGDIMTEE 138
I +GRS T+V +IMT+E
Sbjct: 120 IAEGRSCHYTRVAEIMTDE 138
>gi|210162090|gb|ACJ09643.1| putative CBS domain-containing protein [Cupressus sempervirens]
Length = 138
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 79/94 (84%), Gaps = 7/94 (7%)
Query: 46 MEEHGFESTTISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQK 104
M+ HG ESTT+SD+L AK ADGSWLWCTTDD +VYDAVKSMTQH+VGALVVV EQK
Sbjct: 1 MDAHG-ESTTMSDVLTAKN--ADGSWLWCTTDDRSVYDAVKSMTQHDVGALVVVTQLEQK 57
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
S+AGIIT DYLR IIVQ RSSKST VGDIMTEE
Sbjct: 58 SIAGIITA-DYLR-IIVQ-RSSKSTTVGDIMTEE 88
>gi|297846924|ref|XP_002891343.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
gi|297337185|gb|EFH67602.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
lyrata]
Length = 192
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Query: 28 PMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSM 87
P ++ VS+ F V+S E G E+ T++D+L K D +W+ C T+DTV DAVK+M
Sbjct: 16 PKIQTKVSASFGCVTSPPPPEKGLENLTVADVLSTKDADVD-TWISCRTNDTVSDAVKNM 74
Query: 88 TQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+HN+G+LVV+KPG+Q+ +AGI+TERDY++KII GRSSK TKVGD+MT+E
Sbjct: 75 AKHNIGSLVVLKPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGDVMTDE 125
>gi|414881295|tpg|DAA58426.1| TPA: hypothetical protein ZEAMMB73_299878 [Zea mays]
Length = 236
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLR-PVVSSRFESVSSARMEEH-GFESTTISD 58
MQG ++ HG ++ AVLQ + + + + SR +S S A + H G E+ T+++
Sbjct: 30 MQGITKALRLHGRQLRHAVLQHMNMNKGIFSWATLISRIQSESPAVIIPHMGLENITVNE 89
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
IL+AKG+ G+ WC+T V++AV+ M HNVGALVV+K G+ +AGI+TERD+ RK
Sbjct: 90 ILRAKGEAEAGAVYWCSTAHLVHEAVQHMAAHNVGALVVLKSGDMNQLAGIVTERDFARK 149
Query: 119 IIVQGRSSKSTKVGDIMTEE 138
I++ GR S+ T+V DIMTEE
Sbjct: 150 ILLPGRPSQQTRVEDIMTEE 169
>gi|186489216|ref|NP_001117443.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
gi|332194027|gb|AEE32148.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
thaliana]
Length = 193
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVG 93
VS+ F ++S E G E+ T++D+L K D +W+ C T+DTV DAVK+M +HN+G
Sbjct: 23 VSAGFGCLTSPPPPEKGLENLTVADVLSTKDTDID-TWISCRTNDTVSDAVKNMAKHNIG 81
Query: 94 ALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+LVV++PG+Q+ +AGI+TERDY++KII GRSSK TKVG++MT+E
Sbjct: 82 SLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGEVMTDE 126
>gi|125526972|gb|EAY75086.1| hypothetical protein OsI_02980 [Oryza sativa Indica Group]
Length = 310
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 12/144 (8%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 106 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 159
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 160 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 219
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RKI++ GR S+ T+VGDIMTEE
Sbjct: 220 FARKILLPGRPSEETRVGDIMTEE 243
>gi|115438763|ref|NP_001043661.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|55296012|dbj|BAD68903.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|55296028|dbj|BAD69439.1| CBS domain protein-like [Oryza sativa Japonica Group]
gi|113533192|dbj|BAF05575.1| Os01g0634900 [Oryza sativa Japonica Group]
gi|125571300|gb|EAZ12815.1| hypothetical protein OsJ_02734 [Oryza sativa Japonica Group]
Length = 258
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 12/144 (8%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG +K VLQ M + + S SR ++ S + H G E+
Sbjct: 54 MQGITKALRFHGKQLKLTVLQH------MNKGIFSWATLISRIQTESPTVIIPHIGLENI 107
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +IL AKG+ G+ WC T V++A+K MT HNVGALVV+K G++K +AGI+TERD
Sbjct: 108 RVREILNAKGEAKAGAVYWCCTSHFVHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERD 167
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RKI++ GR S+ T+VGDIMTEE
Sbjct: 168 FARKILLPGRPSEETRVGDIMTEE 191
>gi|242053745|ref|XP_002456018.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
gi|241927993|gb|EES01138.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
Length = 205
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 91/144 (63%), Gaps = 12/144 (8%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VLQ M + + S SR +S S + H G E+
Sbjct: 1 MQGITKALRLHGRQLRHTVLQH------MNKGIFSWATLISRIQSESPTVIIPHMGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S+ILKAKG+ G+ WC+T +V++AV+ MT HNVGALVV+K G +AGI+TERD
Sbjct: 55 TVSEILKAKGEAEAGAVYWCSTSHSVHEAVQHMTAHNVGALVVLKSGNMNQLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RKI++ GR S+ T+V DIMTEE
Sbjct: 115 FSRKILLPGRPSEETRVEDIMTEE 138
>gi|302142508|emb|CBI19711.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 61/73 (83%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G GSWLWC T+DTVYDA K M ++N+G+LVV+KPGE K +AGI TERDY+RKII GRS
Sbjct: 50 GKIGSWLWCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRS 109
Query: 126 SKSTKVGDIMTEE 138
SK TKVG+IMT+E
Sbjct: 110 SKDTKVGEIMTDE 122
>gi|356509678|ref|XP_003523573.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Query: 34 VSSRFE-SVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
+ S+F + SS RM++ G E+ T+S++L KG+ GSWLWC DD V +A+K+M +N+
Sbjct: 34 IYSKFGCATSSPRMQQKGLENVTVSEVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNI 93
Query: 93 GALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
G+LVV+KP E + +AGIITERD L+KI+ QGRS T VG IMT+E
Sbjct: 94 GSLVVLKP-EGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDE 138
>gi|356518816|ref|XP_003528073.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Glycine max]
Length = 205
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 18 AVLQRIRLVNPMLRPVVSSRFESV-SSARMEEHGFESTTISDILKAKGKGADGSWLWCTT 76
A+ QR + + + S F V SS RM++ G E+ T+S++L KG+ GSWLWC
Sbjct: 18 AIFQRFQGNGILNLNKIYSNFGCVTSSPRMQQKGLENVTVSEVLMTKGEENVGSWLWCRA 77
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V +A+K+M +N+G+LVV+KP E + +AGI+TERD L+KI+ QGRS T+VG IMT
Sbjct: 78 DDAVVNAMKNMADNNIGSLVVLKP-EGQHIAGIVTERDCLKKIVAQGRSPLHTQVGQIMT 136
Query: 137 EE 138
+E
Sbjct: 137 DE 138
>gi|357135643|ref|XP_003569418.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 12/144 (8%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRPVVS-----SRFESVSSARMEEH-GFEST 54
MQG ++ HG ++ VL+ M + + S SR +S S A + H G E+
Sbjct: 1 MQGIAKALSFHGKQLRVTVLRH------MNKGIFSWATLISRIQSESPAVIIPHTGLENI 54
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +ILKAKG+ G+ WC+T V++AVK MT NVGALVV+K G++K +AGI+TERD
Sbjct: 55 TVREILKAKGEAEAGAVYWCSTSHLVHEAVKHMTARNVGALVVLKSGDEKKLAGIVTERD 114
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+ RKI++ GR S+ T+V DIMT++
Sbjct: 115 FARKILLPGRPSEGTRVEDIMTQD 138
>gi|168020527|ref|XP_001762794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685903|gb|EDQ72295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
Query: 12 GNIVKSAVLQRIRLVNPMLRPVVSSRFES---VSSARMEEHGFESTTISDILKAKGKGAD 68
G + +VLQ +R+ L + +R ES + + EH FESTTI+D+LK KG+ AD
Sbjct: 51 GRTLSGSVLQHVRVGGSALGFGIQTRRESGQIETRESLVEHRFESTTIADVLKDKGQKAD 110
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
GSWLWC+ +DTVYDAVKSMT +NV AL+VVK G +K +AGIITER
Sbjct: 111 GSWLWCSVEDTVYDAVKSMTANNVEALLVVKSGTEKMLAGIITER 155
>gi|51471864|gb|AAU04402.1| unknown [Citrus limon]
Length = 117
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/49 (97%), Positives = 48/49 (97%)
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
HNVGALVVVKPGEQKS AGIITERDYLRKIIVQGRSSKSTKVGDIMTEE
Sbjct: 1 HNVGALVVVKPGEQKSAAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 49
>gi|449469967|ref|XP_004152690.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
gi|449520034|ref|XP_004167039.1| PREDICTED: CBS domain-containing protein CBSX3, mitochondrial-like
[Cucumis sativus]
Length = 206
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
Query: 53 STTISDILKAKGKGADGS-WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
+ T+ +I+ KG+G GS W+ C +DT DAV++M +HN+G+LVV+K E +++AGI+T
Sbjct: 54 NITVREIVSKKGEGGIGSSWISCRAEDTAIDAVQNMARHNIGSLVVMKS-EGENIAGIVT 112
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEE 138
ERDYL+KII GRS TKVG+IMT E
Sbjct: 113 ERDYLKKIIADGRSPIYTKVGEIMTHE 139
>gi|307111947|gb|EFN60181.1| hypothetical protein CHLNCDRAFT_33710 [Chlorella variabilis]
Length = 218
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 17/103 (16%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE------- 102
G+ +T + +LKAK + + G+WLWC DD V DAV+ MT NVG+L+V P +
Sbjct: 48 GWGTTRVEALLKAKAEDS-GAWLWCAADDFVIDAVRKMTHANVGSLLVFDPSKMHLVRDK 106
Query: 103 ---------QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ +V G+ITERDYL K++V+G+ S STKV +IMT
Sbjct: 107 DSKHITNASKDAVVGLITERDYLTKVVVKGKQSSSTKVSEIMT 149
>gi|255086147|ref|XP_002509040.1| predicted protein [Micromonas sp. RCC299]
gi|226524318|gb|ACO70298.1| predicted protein [Micromonas sp. RCC299]
Length = 158
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 61/89 (68%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G E T+ D+L K G+WLWC + +AV++MT+ NVGAL++V+ + +VAG+
Sbjct: 1 GLEKYTVGDLLLTKSLEDRGTWLWCDENVPALEAVRTMTKANVGALLLVRGRWEDAVAGV 60
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+TERDYLRK++ Q + + +T VG IMT++
Sbjct: 61 LTERDYLRKVVAQNKDASTTAVGTIMTDK 89
>gi|384250881|gb|EIE24360.1| CBS-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 230
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 13/107 (12%)
Query: 43 SARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-- 100
S+R+ + G+ T I +L++K G+WLWC+ DD V DAVK MT+ NVG+L+V P
Sbjct: 59 SSRVGKQGWGQTKIGQVLQSKHDA--GAWLWCSKDDLVIDAVKKMTKGNVGSLLVFDPEK 116
Query: 101 ---------GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V GI+TERDYL K++V+ +SSK V IMT++
Sbjct: 117 ITIDQPIKEASGDAVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDK 163
>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria IOP40-10]
Length = 153
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|387905594|ref|YP_006335932.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387580486|gb|AFJ89201.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 153
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMTSKV 84
>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
vietnamiensis G4]
Length = 153
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDAVK M + +GAL+V++ E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKADFVYDAVKLMAEKGIGALLVMEGDE---IAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVDEIMTSKV 84
>gi|452825148|gb|EME32146.1| IMP dehydrogenase [Galdieria sulphuraria]
Length = 263
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK---PGEQKSVAGIIT 111
T+ DILK KG+ + T D VYDA+K M +NVG+LVV+ G GI+T
Sbjct: 113 TVGDILKVKGE----KFYRIKTTDFVYDAIKKMVDNNVGSLVVIDVDGDGITGKPLGIVT 168
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMT 136
ERDYLRKI++ GRSSK+T V DIMT
Sbjct: 169 ERDYLRKIVLLGRSSKTTYVKDIMT 193
>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria AMMD]
Length = 153
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV E +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---EGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia AU 1054]
gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia HI2424]
gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
Length = 153
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RKI++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMTAKV 84
>gi|416908508|ref|ZP_11931183.1| signal-transduction protein [Burkholderia sp. TJI49]
gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
Length = 153
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDA--GRTIYTVTKADLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|394986438|pdb|4FRY|A Chain A, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
gi|394986439|pdb|4FRY|B Chain B, The Structure Of A Putative Signal-Transduction Protein
With Cbs Domains From Burkholderia Ambifaria Mc40-6
Length = 157
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AG
Sbjct: 3 GSMSTTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAG 57
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
I+TERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 58 IVTERDYARKVVLQERSSKATRVEEIMTAKV 88
>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
cenocepacia MC0-3]
Length = 153
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RKI++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKIVLQDRSSKATRVEEIMTAKV 84
>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 153
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 62/88 (70%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T +D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKNDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQERSSKATRVEEIMTAKV 84
>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
gi|421867786|ref|ZP_16299439.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|444360972|ref|ZP_21162128.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444366723|ref|ZP_21166740.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358072199|emb|CCE50317.1| CBS domain protein [Burkholderia cenocepacia H111]
gi|443598832|gb|ELT67156.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|443604077|gb|ELT72039.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
Length = 153
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKSDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MEX-5]
Length = 153
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDFVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|418531800|ref|ZP_13097711.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
gi|371451302|gb|EHN64343.1| signal-transduction protein with CBS [Comamonas testosteroni ATCC
11996]
Length = 151
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI +QGRSS ST+V ++MT +V
Sbjct: 56 DYARKIALQGRSSASTRVDEVMTRKV 81
>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. 383]
Length = 153
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ +LKAK G ++ T D VYDA+K M + +GAL+VV + +AGI+T
Sbjct: 2 STTVAQLLKAKPDS--GRTIYTVTKTDLVYDAIKLMAEKGIGALLVV---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|221065849|ref|ZP_03541954.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|264679584|ref|YP_003279491.1| signal-transduction protein with CBS [Comamonas testosteroni CNB-2]
gi|220710872|gb|EED66240.1| CBS domain containing protein [Comamonas testosteroni KF-1]
gi|262210097|gb|ACY34195.1| putative signal-transduction protein with CBS [Comamonas
testosteroni CNB-2]
Length = 151
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ GE +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI +QGRSS ST+V ++MT +V
Sbjct: 56 DYARKIALQGRSSASTRVDEVMTRKV 81
>gi|421471493|ref|ZP_15919777.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|400225423|gb|EJO55591.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 153
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTTKV 84
>gi|421484626|ref|ZP_15932194.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
gi|400197121|gb|EJO30089.1| hypothetical protein QWC_18467 [Achromobacter piechaudii HLE]
Length = 146
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K + S + + D +VYDA+K+M + ++GA+VVV E +V G+++ERD
Sbjct: 3 TVAEILREK---PNQSVVTVSPDSSVYDAIKTMAERSIGAVVVV---EGDTVLGMLSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS+STKV DIMT+ V
Sbjct: 57 YARKVVLQDRSSRSTKVRDIMTDSV 81
>gi|402568485|ref|YP_006617829.1| signal-transduction protein [Burkholderia cepacia GG4]
gi|402249682|gb|AFQ50135.1| putative signal-transduction protein [Burkholderia cepacia GG4]
Length = 153
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ GE +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYTVAKADFVYDAIKLMAEKGIGALLVMD-GE--DIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ERDYARKVVLQDRSSKATRVEEIMTAKV 84
>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
ubonensis Bu]
Length = 153
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + + TD VYDA+K M + +GAL+V+ + ++GI+TE
Sbjct: 2 STTVAQILKAKPESGRTVYTVRKTD-LVYDAIKLMAEKGIGALLVM---DGDDISGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKI++Q RSSK+T+V +IMT +V
Sbjct: 58 RDYARKIVLQDRSSKATRVEEIMTSKV 84
>gi|299533325|ref|ZP_07046709.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
gi|298718855|gb|EFI59828.1| putative signal-transduction protein with CBS [Comamonas
testosteroni S44]
Length = 151
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 62/86 (72%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+AKG + + + DT+ A++ M + ++GAL+V++ G+ +AGI+TER
Sbjct: 2 TTVAEILRAKG---NSTIYSVSPSDTMLAALQLMAEKSIGALLVLEGGD---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI +QGRSS ST+V ++MT +V
Sbjct: 56 DYARKIALQGRSSASTRVDEVMTRKV 81
>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVYD + +M +G++V+ + E
Sbjct: 1 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVITEDDE-- 58
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ GI TERDY+R I ++GRSS T+V ++MTE+V
Sbjct: 59 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTEDV 92
>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|189353318|ref|YP_001948945.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
gi|421474512|ref|ZP_15922544.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
multivorans ATCC 17616]
gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|400232026|gb|EJO61674.1| CBS domain protein [Burkholderia multivorans CF2]
Length = 153
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TE
Sbjct: 2 STTVAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+++Q RSSK+T+V +IMT +V
Sbjct: 58 RDYARKVVLQDRSSKATRVEEIMTTKV 84
>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
Length = 154
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A + + D +V+DA+K+M + +GA+VVV+ GE +V G+++ERD
Sbjct: 11 TVAEILREKSNNA---VVTVSPDSSVFDAIKTMAERRIGAVVVVQ-GE--TVLGMLSERD 64
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS++TKV DIMT+ V
Sbjct: 65 YARKVVLQDRSSRTTKVRDIMTDSV 89
>gi|256424385|ref|YP_003125038.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256039293|gb|ACU62837.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 146
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG DDTV+DA+ + NVGALVV+ G+ + V GI +ERD
Sbjct: 3 TVRDILRVKGHAV----YSVQPDDTVFDALSVLVDKNVGALVVL--GDNEKVLGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE 137
Y R++I++GR+SK T + +IMTE
Sbjct: 57 YARRVILKGRASKETLIREIMTE 79
>gi|422317676|ref|ZP_16398976.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
gi|317407797|gb|EFV87724.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
C54]
Length = 146
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++IL+ K A+ + + + D +VYDA+K+M + ++GA+VV + E V G++TERDY
Sbjct: 4 VAEILREK---ANPAVVTVSPDSSVYDAIKTMAERSIGAVVVAQGDE---VLGMLTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RKI++Q RSS++TKV +IMT+ V
Sbjct: 58 ARKIVLQDRSSRTTKVREIMTDSV 81
>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
Length = 153
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT++ ILKAK G ++ D VYDA+K M + +GAL+V+ + +AGI+T
Sbjct: 2 STTVAQILKAKPDS--GRTIYSVRKTDLVYDAIKLMAEKGIGALLVM---DGDDIAGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++Q RSS++T+V +IMT +V
Sbjct: 57 ERDYARKVVLQERSSRATRVEEIMTAKV 84
>gi|83814945|ref|YP_446606.1| hypothetical protein SRU_2508 [Salinibacter ruber DSM 13855]
gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 175
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 46 MEEHGFESTTISDILKAKGK-GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQK 104
M+E T + D+L+ KG +G L T DTVY+ + +M +G++V+ + E
Sbjct: 16 MDERELVETRVRDVLRTKGTLQQNGDVLTATPTDTVYECIDAMVDRGIGSIVITEDDE-- 73
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ GI TERDY+R I ++GRSS T+V ++MTE+V
Sbjct: 74 -MVGIFTERDYMRDIALKGRSSPETEVQEVMTEDV 107
>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
Length = 146
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+ K A+ S + + D +V++AVK M + ++GA+VVV+ +V G++TERD
Sbjct: 3 TVAEILREK---ANHSVVTVSPDASVFEAVKIMAERSIGAVVVVQG---DAVLGMLTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI++Q RSS++TKV DIMT+ V
Sbjct: 57 YARKIVLQDRSSRTTKVRDIMTDSV 81
>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 146
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+KG A + DD+V+DA+K M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILKSKGGAAVHTI---RPDDSVFDALKCMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI ++GR+S T+V D+MT V
Sbjct: 56 DYARKIALKGRTSALTQVRDVMTTSV 81
>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 147
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K +D + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSDVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSSK+T V DIM++ V
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAV 82
>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
gi|385204644|ref|ZP_10031514.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
xenovorans LB400]
gi|385184535|gb|EIF33809.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 147
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VYDA+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYDAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V DIM++ V
Sbjct: 57 DYARKVVLLDRSSKATPVRDIMSKAV 82
>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 185
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
G T++ ILK+K D + VYDA+K M + +GALVV + G+ + GI
Sbjct: 37 GHPMATVAQILKSK---PDTTVYTIDASALVYDAMKRMAEKQIGALVVTENGK---IVGI 90
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+TERDY RKI++ RSSK+T V DIMT +V
Sbjct: 91 VTERDYARKIVLMDRSSKATAVRDIMTRDV 120
>gi|303279450|ref|XP_003059018.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460178|gb|EEH57473.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 243
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 19/106 (17%)
Query: 50 GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGE------- 102
G E T D+L K G WLW + + +AV+ MT+ NVGAL+V++
Sbjct: 68 GLEKLTAGDLLLQKTLDQRGHWLWVDVNSSALEAVQRMTRANVGALLVMRERVLDVDDDG 127
Query: 103 ------------QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+VAG++TERDYL KI+ + + +TKVGD+MT
Sbjct: 128 VVTREEASSGKWDDAVAGVVTERDYLHKIVAKHGDASTTKVGDVMT 173
>gi|294508474|ref|YP_003572532.1| hypothetical protein SRM_02659 [Salinibacter ruber M8]
gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
ruber M8]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 76 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 132
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+AGI TERD++RK+ ++GR+ + T V +MTE+V
Sbjct: 133 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTEDV 166
>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
Length = 259
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
E F T + DI+K K + ++ +++T+YDA+K M H +G L+VV + S+
Sbjct: 101 EYFAFGDTQVGDIIKEK---QEKQIIYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDG-SL 156
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
GI TERDYL K+ + G+SSK T V D MT +V
Sbjct: 157 VGIFTERDYLGKVALMGKSSKETLVQDAMTTKV 189
>gi|83816083|ref|YP_446538.1| hypothetical protein SRU_2439 [Salinibacter ruber DSM 13855]
gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
Length = 229
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSW-LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
+E ++++ D+L+AKG D + L D+VYD + M + VG++VV G +
Sbjct: 68 DEPAIPNSSVEDVLEAKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSIVVTADG---A 124
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+AGI TERD++RK+ ++GR+ + T V +MTE+V
Sbjct: 125 IAGIFTERDHMRKMALEGRAPRDTAVQTVMTEDV 158
>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 158
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++DILK+K + + T TV+DAVK M + +GAL+V + GEQ + GI+TER
Sbjct: 14 TSVADILKSKPQAVVHT---TTPSTTVFDAVKLMAEKGIGALLVTE-GEQ--LVGIVTER 67
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS+ T V DIMT +V
Sbjct: 68 DYARKVALMSRSSRETPVRDIMTADV 93
>gi|187919677|ref|YP_001888708.1| signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 147
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K + DD+VY+A+K M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNNT--TVFTVGADDSVYEAIKLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V DIM++ V
Sbjct: 57 DYARKVVLMDRSSKATPVRDIMSKAV 82
>gi|423013390|ref|ZP_17004111.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
gi|338783618|gb|EGP47981.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans AXX-A]
Length = 130
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D +VYDA+K+M + ++GA+VV E V G++TERDY RKI++Q RSS++TKV
Sbjct: 1 MTVTPDSSVYDAIKTMAERSIGAVVV---AEGDEVLGMLTERDYARKIVLQDRSSRTTKV 57
Query: 132 GDIMTEEV 139
+IMT+ V
Sbjct: 58 REIMTDSV 65
>gi|238024821|ref|YP_002909053.1| signal-transduction protein [Burkholderia glumae BGR1]
gi|237879486|gb|ACR31818.1| signal-transduction protein [Burkholderia glumae BGR1]
Length = 154
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
STT+++ILK+K + G ++ D++VYDA+K M +VGALVV E + GI+T
Sbjct: 2 STTVANILKSKPEA--GRTVYTIGKDESVYDALKLMAIKSVGALVVT---EGNDIVGIVT 56
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++ RSSK+T++ +IMT +V
Sbjct: 57 ERDYARKVVLLERSSKATRIEEIMTMKV 84
>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
Length = 149
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
++ ILKAK G ++ T D VYDA+K M+ +GAL+V+ + +AGI+TERD
Sbjct: 1 MAQILKAKPDS--GRTIYTVTKTDLVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSSK+T+V +IMT +V
Sbjct: 56 YARKVVLQDRSSKATRVEEIMTTKV 80
>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
Length = 147
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 7/86 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DIL KG + D TVYDA+K M +N+G+ V+V G++ + GI TER
Sbjct: 3 TTVKDILAKKG----NQIFTVSADSTVYDALKVMADNNIGS-VLVMDGDK--MVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+I++G+ SK T + ++MTE+V
Sbjct: 56 DYARKLILKGKYSKDTPIKEVMTEKV 81
>gi|449019275|dbj|BAM82677.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 312
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 6/70 (8%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPG------EQKSVAGIITERDYLRKIIVQGRSSKS 128
+ + TV++AV+ M HNVGA+ VV+P + + + GI TERDYLRKIIV ++SK+
Sbjct: 131 SPESTVFEAVQKMVAHNVGAVAVVEPDANDAARQAQRLVGIFTERDYLRKIIVASKASKT 190
Query: 129 TKVGDIMTEE 138
T + ++MT++
Sbjct: 191 TPIAEVMTQD 200
>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
CCGE1002]
gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 147
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK K ++ + DD+VY+A++ M + +GALVV + S+AGI+TER
Sbjct: 2 TSVAQLLKTKPNSSEVYTIGA--DDSVYEAIRLMAEKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSSK+T V DIM++ V
Sbjct: 57 DYARKIVLMDRSSKATPVRDIMSKAV 82
>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 146
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
Query: 54 TTISDILKAKGKGADGSWLWC-TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ +SDILK+K + + C DD+V DA+K M + +GAL+V+ E +++ GI+TE
Sbjct: 2 SIVSDILKSKPS----NVIHCLAPDDSVLDALKLMAEKGIGALLVM---EGQAIVGIVTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKI + GR+S +T V D+MT +V
Sbjct: 55 RDYARKIALLGRTSAATLVRDVMTRDV 81
>gi|383757315|ref|YP_005436300.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
gi|381377984|dbj|BAL94801.1| hypothetical protein RGE_14600 [Rubrivivax gelatinosus IL144]
Length = 142
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+VY A++ + +H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ TK
Sbjct: 15 LWHLHPDDSVYAALELLAEHEIGALLVMDGG---RLVGVVSERDYTRKVALQGRNSRETK 71
Query: 131 VGDIMTEEV 139
V +IMT EV
Sbjct: 72 VAEIMTREV 80
>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
gi|333915885|ref|YP_004489617.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
acidovorans SPH-1]
gi|333746085|gb|AEF91262.1| putative signal transduction protein with CBS domains [Delftia sp.
Cs1-4]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+K A G+ D+V DA++ M +GAL+V++ E +AGI+TER
Sbjct: 2 TAVADILKSK---ASGAVYSIAPTDSVLDALRLMADKGIGALLVMEGSE---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR+S +T V D+MT +V
Sbjct: 56 DYARKIALLGRTSGATLVRDVMTRDV 81
>gi|34499375|ref|NP_903590.1| hypothetical protein CV_3920 [Chromobacterium violaceum ATCC 12472]
gi|34105225|gb|AAQ61581.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 144
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K A ++ T D TV+ A++ M ++++GA++V++ G+ + GI +ERD
Sbjct: 3 TVRQLLDSKPTRA---LVYVTPDSTVFQALQVMAENDIGAVLVMESGD---IVGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R+I++QGR+S TKV DIMT V
Sbjct: 57 YARRIVLQGRTSAGTKVRDIMTSRV 81
>gi|407710796|ref|YP_006794660.1| hypothetical protein BUPH_06076 [Burkholderia phenoliruptrix
BR3459a]
gi|407239479|gb|AFT89677.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 147
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV E ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---EGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V +IM++ V
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAV 82
>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
Length = 149
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILKAK + TD VYDA+K M+ +GAL+V+ + +AGI+TERDY
Sbjct: 1 MAQILKAKPDSGRTIYTVKKTD-LVYDAIKLMSDKGIGALLVM---DGDDIAGIVTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RK+++Q RSSK+T+V +IMT +V
Sbjct: 57 ARKVVLQDRSSKATRVEEIMTTKV 80
>gi|420251570|ref|ZP_14754734.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398057451|gb|EJL49412.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 160
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSS++T V DIM+ EV
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEV 81
>gi|390572107|ref|ZP_10252332.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
gi|389935895|gb|EIM97798.1| hypothetical protein WQE_27120 [Burkholderia terrae BS001]
Length = 160
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K D +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQFLRSK----DSQTVWSTHASASVYDAIAIMAHRQVGALIVANEGR---LAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSS++T V DIM+ EV
Sbjct: 56 DYARKIVLMDRSSRNTPVRDIMSTEV 81
>gi|330820198|ref|YP_004349060.1| putative signal-transduction protein [Burkholderia gladioli BSR3]
gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
Length = 153
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
STT+++ILK+K A + +D+VYDA+K M +GALVV K GE + GI+TE
Sbjct: 2 STTVANILKSK-PDAGQTVHTIGKNDSVYDALKLMAIKGIGALVV-KEGE--DIVGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+++ RSSK T++ +IMT +V
Sbjct: 58 RDYARKVVLLERSSKDTRIEEIMTVKV 84
>gi|387792257|ref|YP_006257322.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655090|gb|AFD08146.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 147
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL KG + ++TVYDA++ + + N+GALVV G GI TERDY
Sbjct: 4 VKDILAKKG----NTVYTIDAEETVYDALEDLIEKNIGALVVTDHGRH---IGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RK+I++GR+SK T+V +IM++ +
Sbjct: 57 ARKVILKGRASKETRVREIMSDHL 80
>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 146
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + + DD+VY+A++ M +GALVV + S+AGIITER
Sbjct: 2 TTVAQLLKTK---PNTTVYTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIITER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V +IM++ V
Sbjct: 56 DYARKVVLMDRSSKATPVREIMSKAV 81
>gi|390568013|ref|ZP_10248325.1| signal-transduction protein [Burkholderia terrae BS001]
gi|389940016|gb|EIN01833.1| signal-transduction protein [Burkholderia terrae BS001]
Length = 144
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G S+AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---SIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSSK+T V DIM+ V
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAV 81
>gi|387792221|ref|YP_006257286.1| putative signal transduction protein [Solitalea canadensis DSM
3403]
gi|379655054|gb|AFD08110.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Solitalea canadensis DSM 3403]
Length = 144
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+ KG + TVYDA++ + + N+GAL+VV + + GI TERDY
Sbjct: 4 VRSILQLKGNAV----FTISPSHTVYDALELLVEKNIGALMVV---DNERFVGIFTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
RK+I++GRSSK T +G+IMT
Sbjct: 57 ARKVILKGRSSKETLIGEIMT 77
>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 147
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A++ M +GALVV + S+AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIRLMADKGIGALVVT---DGDSIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V +IM++ V
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAV 82
>gi|291297328|ref|YP_003508726.1| putative signal transduction protein [Meiothermus ruber DSM 1279]
gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
ruber DSM 1279]
Length = 145
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++T+ +L AKG + + TV++A++ M H+VGAL+V+K + + GI +E
Sbjct: 2 TSTVRQLLLAKGNKVHA----ISPEATVFEALERMAAHDVGALMVMKDDQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKII+ GR SK T+VG++MT ++
Sbjct: 55 RDYARKIILMGRISKDTRVGEVMTSDL 81
>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
delafieldii 2AN]
Length = 146
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K D + DD+V+DA++ M +GAL+V+ E ++ GI+TER
Sbjct: 2 TAVADILRSK---RDNTVHRIGPDDSVFDALQRMADKGIGALLVM---EGDAIVGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR S +T V D+MT +V
Sbjct: 56 DYARKIALLGRKSSATLVRDVMTADV 81
>gi|325272356|ref|ZP_08138756.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
gi|324102516|gb|EGB99962.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV E K V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNIGALPVV---EGKQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
Length = 147
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT++ +LK K + DD+VY+A+K M +GALVV + ++AGI+TER
Sbjct: 2 TTVAQLLKTKPNHT--TVFTIGADDSVYEAIKLMADKGIGALVVT---DGDTIAGIVTER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSSK+T V +IM++ V
Sbjct: 57 DYARKVVLMDRSSKATPVREIMSKAV 82
>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
Length = 143
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVY A+ M QH VGAL+V+ GEQ + GI +ERDY RKII+QG++SK T V +IM++
Sbjct: 22 DTVYHALTVMAQHEVGALLVLD-GEQ--LVGIFSERDYARKIILQGKTSKETLVREIMSD 78
Query: 138 EV 139
V
Sbjct: 79 RV 80
>gi|375146265|ref|YP_005008706.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361060311|gb|AEV99302.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 143
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ DIL+ KG + +VY+A++++ N+G+LVV++ E + GI TERD
Sbjct: 3 TVRDILQIKGHVV----YTVNPESSVYEALETLESKNLGSLVVLE--ECGKLDGIFTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE 137
Y RK+I++GRSSK T+V DIMTE
Sbjct: 57 YARKVILKGRSSKETRVMDIMTE 79
>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 145
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ GRSS T V ++MT V
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAV 81
>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 145
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++IL+ K ADG DTV A++ M +GAL+V++ G+Q +AGI TER
Sbjct: 2 TTVAEILRTK---ADGQVHAVEPSDTVLTALRRMADKGIGALLVME-GDQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ GRSS T V ++MT V
Sbjct: 56 DYARKMVLLGRSSGDTPVSEVMTRAV 81
>gi|83716568|ref|YP_439711.1| hypothetical protein BTH_II1515 [Burkholderia thailandensis E264]
gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 153
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ ILK+K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILKSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+++ RSSK+T+V +IMT +V
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKV 84
>gi|297564581|ref|YP_003683553.1| putative signal transduction protein [Meiothermus silvanus DSM
9946]
gi|296849030|gb|ADH62045.1| putative signal transduction protein with CBS domains [Meiothermus
silvanus DSM 9946]
Length = 143
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ +L+ KG TVY+A++ M QH+VGAL+V++ G+ + GI +E
Sbjct: 2 TATVRQLLQVKGS----RVFDIHPQATVYEALERMAQHDVGALLVLEEGQ---LVGIFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKII+ GR+S+ T V ++MT ++
Sbjct: 55 RDYARKIILMGRASRDTPVHEVMTTDL 81
>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 149
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ + KS+AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVM---DGKSIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + GR+S T+V D+MT V
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAV 81
>gi|421530746|ref|ZP_15977211.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
gi|402211864|gb|EJT83296.1| hypothetical protein PPS11_38130 [Pseudomonas putida S11]
Length = 145
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQ--HQTVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|340787171|ref|YP_004752636.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
gi|340552438|gb|AEK61813.1| putative signal-transduction protein with CBS domains [Collimonas
fungivorans Ter331]
Length = 151
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ ILK K + + D V+DA+K M+ +VGAL+V G+ + GI+TERD
Sbjct: 8 TVAQILKTK---QNQTVYTIAPDAKVFDAIKMMSDKSVGALLVTVQGK---IVGIVTERD 61
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I++GRSS T V DIMT V
Sbjct: 62 YARKMILKGRSSTDTSVSDIMTSSV 86
>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
Length = 240
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 39 ESVSSARMEEH--GFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALV 96
E A+ H GF T + ++L K +G + + DTV++A+++M +H VGALV
Sbjct: 69 ELTPEAKERRHTAGFVDTKVMELLSNKPRGYQ-NIIKVKEGDTVFNAIQTMQKHKVGALV 127
Query: 97 VVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
VV + + GI +ERDY+ +I+V+ SS++T + D+M+ V
Sbjct: 128 VV--DAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSPHV 168
>gi|319763071|ref|YP_004127008.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|330825150|ref|YP_004388453.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 145
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+++ILK+K D DTV A++ M + ++GAL+V++ GEQ +AGI TER
Sbjct: 2 TTVAEILKSK---PDAQVHCVAPSDTVLAALRLMAEKHIGALLVME-GEQ--IAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ GR+S T V ++MT V
Sbjct: 56 DYARKVVLLGRASVDTPVREVMTRAV 81
>gi|420254612|ref|ZP_14757606.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
gi|398048356|gb|EJL40830.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. BT03]
Length = 144
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSKPTQ---EVYTIEASDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSSK+T V DIM+ V
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAV 81
>gi|452822839|gb|EME29855.1| CBS domain protein [Galdieria sulphuraria]
Length = 341
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 17/113 (15%)
Query: 37 RFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVY---------DAVKSM 87
R + S +M FE T+ D+L++KG G D+TVY +A++ M
Sbjct: 170 REDCYVSQKMIAPFFEQQTVKDVLESKGLDRSG-------DNTVYQIHQSVSVDEAIQKM 222
Query: 88 TQHNVGALVVVK-PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
H VG L+V + + S+ G++TER+++RK I+QG++S+ T DIM +++
Sbjct: 223 DDHKVGTLLVTQSESNRHSIVGLLTERNFIRKCILQGKNSRETLASDIMIQDL 275
>gi|333902040|ref|YP_004475913.1| signal transduction protein with CBS domains [Pseudomonas fulva
12-X]
gi|333117305|gb|AEF23819.1| putative signal transduction protein with CBS domains [Pseudomonas
fulva 12-X]
Length = 145
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D+LK+K + T D +V+ AVK M + +GALVV+ E + +AGI++ERD
Sbjct: 4 TVADVLKSK---PISNVYSVTPDSSVFAAVKLMAEKGIGALVVL---EGERLAGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y+RK+ VQ RS + KV +IMT +V
Sbjct: 58 YVRKVAVQERSPANLKVSEIMTAKV 82
>gi|344338506|ref|ZP_08769438.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343801788|gb|EGV19730.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 143
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 66 GADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
G GS +W D +VYDA+ M + +GAL+V+ G ++ G+I+ERDY R +I++GR
Sbjct: 9 GDKGSQVWSIGPDASVYDALVLMAEKQIGALLVMDDG---AMIGLISERDYARSVILRGR 65
Query: 125 SSKSTKVGDIMTEEV 139
+SK T V D+MTE V
Sbjct: 66 TSKETLVSDVMTERV 80
>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
Length = 140
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ IL+ KG S +W D TV+DA++ M +VGALVV+ E V GII+ER
Sbjct: 4 TVRHILEVKG-----SDVWSIGPDATVFDALRMMADKDVGALVVM---ENDKVVGIISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY RKII+ G+SSK T V +IM+
Sbjct: 56 DYARKIILHGKSSKETLVREIMS 78
>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 144
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+++ +LK+K D+VY+A+K M +GAL+V + G ++AGI+TER
Sbjct: 2 TSVAQVLKSK---PTQEVYTIEATDSVYNAIKLMADKQIGALIVKENG---AIAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSSK+T V DIM+ V
Sbjct: 56 DYARKIVLMDRSSKTTPVRDIMSSAV 81
>gi|255034048|ref|YP_003084669.1| putative signal transduction protein [Dyadobacter fermentans DSM
18053]
gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
fermentans DSM 18053]
Length = 140
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 50/69 (72%), Gaps = 4/69 (5%)
Query: 72 LWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+W T D+TV++A++ M + N+GA++V++ E + GI +ERDY RK+I+QGR+SK T
Sbjct: 9 IWSVTQDNTVFEALELMAEKNIGAVLVLEDNE---LIGIFSERDYARKVILQGRASKDTL 65
Query: 131 VGDIMTEEV 139
+ D+MT V
Sbjct: 66 IRDVMTARV 74
>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus glucosetrophus
SIP3-4]
gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
glucosetrophus SIP3-4]
gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
sp. MP688]
Length = 142
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + L D VYDA+K M ++ VGAL+V++ +++ GI +ERD
Sbjct: 3 TVRQLLEEKGN----TILSVGPDSLVYDALKIMAEYRVGALLVMRG---QALVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R+++++G++SK+T V DIM+ +V
Sbjct: 56 YAREVVLKGKTSKTTPVSDIMSHQV 80
>gi|53717172|ref|YP_105966.1| hypothetical protein BMAA1350 [Burkholderia mallei ATCC 23344]
gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76818563|ref|YP_337630.1| hypothetical protein BURPS1710b_A2480 [Burkholderia pseudomallei
1710b]
gi|121597823|ref|YP_989945.1| hypothetical protein BMASAVP1_0334 [Burkholderia mallei SAVP1]
gi|124381836|ref|YP_001024428.1| hypothetical protein BMA10229_0612 [Burkholderia mallei NCTC 10229]
gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386864670|ref|YP_006277618.1| hypothetical protein BP1026B_II0968 [Burkholderia pseudomallei
1026b]
gi|403522515|ref|YP_006658084.1| hypothetical protein BPC006_II1233 [Burkholderia pseudomallei
BPC006]
gi|418395944|ref|ZP_12969846.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418535801|ref|ZP_13101538.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418543432|ref|ZP_13108789.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418549968|ref|ZP_13114976.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418555654|ref|ZP_13120344.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385352840|gb|EIF59227.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385353208|gb|EIF59569.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385354522|gb|EIF60786.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385368339|gb|EIF73796.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385373249|gb|EIF78304.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385661798|gb|AFI69220.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403077582|gb|AFR19161.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 4/87 (4%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T++ IL++K + D+VY+A+K M + ++GAL+V+ + ++AGI+TE
Sbjct: 2 SLTVAQILRSKPDSG-RTIHMVEKSDSVYNAIKLMAEKSIGALLVM---DGANIAGIVTE 57
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+++ RSSK+T+V +IMT +V
Sbjct: 58 RDYARKVVLLDRSSKATRVEEIMTSKV 84
>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 143
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G + + DD V+ A++ M HNVGA++V+ + K + GI +ERDY RK+I+ G++SK
Sbjct: 13 GPLVIVSPDDAVFHALQVMADHNVGAVLVL---DGKQLVGIFSERDYARKVILFGKASKD 69
Query: 129 TKVGDIMTEEV 139
T+V +IMT++V
Sbjct: 70 TRVREIMTDKV 80
>gi|218297014|ref|ZP_03497691.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242569|gb|EED09106.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 143
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A++ M QH++GAL+V++ GE+ + GI +ERD
Sbjct: 2 TVRQVLLRKG----GAVYAISPQATVLEALERMAQHDIGALLVME-GEE--LVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GR SK T+V ++MT EV
Sbjct: 55 YARKLVLLGRFSKDTRVEEVMTREV 79
>gi|431800237|ref|YP_007227140.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
gi|430791002|gb|AGA71197.1| hypothetical protein B479_01395 [Pseudomonas putida HB3267]
Length = 145
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EANQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|336322612|ref|YP_004602579.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
gi|336106193|gb|AEI14011.1| putative signal transduction protein with CBS domains [Flexistipes
sinusarabici DSM 4947]
Length = 146
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ DIL K + + + TV++A+K M+ ++GAL+V E +V GI +ER
Sbjct: 2 STVKDILSKK----ESQVYTVSPEKTVFEALKIMSDEDIGALIVT---EGDNVKGIFSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+I++G+SSK KV DIMT +V
Sbjct: 55 DYARKVILKGKSSKDLKVSDIMTTDV 80
>gi|395650715|ref|ZP_10438565.1| hypothetical protein Pext1s1_19137 [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++++LKAK K + + W D TV++A+ M+ NVGAL VVK GE V GII+E
Sbjct: 3 TVAEVLKAKDLKNQEVHTIEW---DHTVFEALVVMSSKNVGALPVVKHGE---VVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+I++G SS +TKV ++M+ V
Sbjct: 57 RDYARKLILKGLSSVTTKVHEVMSAPV 83
>gi|388469324|ref|ZP_10143533.1| CBS domain protein [Pseudomonas synxantha BG33R]
gi|388006021|gb|EIK67287.1| CBS domain protein [Pseudomonas synxantha BG33R]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK G V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIQW---DHTVFEALVRMSEKNVGALPVVKEG---VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+I++G SS +T+V D+M+ V
Sbjct: 57 RDYARKLILKGLSSVTTRVDDVMSSPV 83
>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424905115|ref|ZP_18328622.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|390929509|gb|EIP86912.1| CBS domain protein [Burkholderia thailandensis MSMB43]
Length = 154
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 61/89 (68%), Gaps = 8/89 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + ++AGI+
Sbjct: 2 SLTVAQILRSK---PDSGRTIHTIEKSDSVYNAIKLMAERSIGALLVM---DGANIAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
TERDY RK+++ RSSK+T+V +IMT +V
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMTAKV 84
>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
Poribacteria sp. WGA-A3]
Length = 144
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 9/82 (10%)
Query: 59 ILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
ILK KG S +W D+TVY A++ M + +GAL+V+ GE+ V GI +ERDY R
Sbjct: 7 ILKNKG-----SSVWSIGPDETVYKALQMMAEKEIGALLVLD-GEK--VVGIFSERDYAR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEEV 139
K+I+QGRSS +TK+ ++M +V
Sbjct: 59 KVILQGRSSANTKISELMIRDV 80
>gi|398848487|ref|ZP_10605300.1| CBS domain-containing protein [Pseudomonas sp. GM84]
gi|398248217|gb|EJN33640.1| CBS domain-containing protein [Pseudomonas sp. GM84]
Length = 145
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ +ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 NVEEILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNVGALPVV---ENNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|170719459|ref|YP_001747147.1| hypothetical protein PputW619_0272 [Pseudomonas putida W619]
gi|169757462|gb|ACA70778.1| CBS domain containing protein [Pseudomonas putida W619]
Length = 145
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKMLAEKNVGALPVV---ENNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EEV 139
V
Sbjct: 80 APV 82
>gi|26986946|ref|NP_742371.1| hypothetical protein PP_0202 [Pseudomonas putida KT2440]
gi|395446551|ref|YP_006386804.1| CBS domain-containing protein [Pseudomonas putida ND6]
gi|24981558|gb|AAN65835.1|AE016212_1 CBS domain protein [Pseudomonas putida KT2440]
gi|388560548|gb|AFK69689.1| CBS domain-containing protein [Pseudomonas putida ND6]
Length = 145
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|167031246|ref|YP_001666477.1| hypothetical protein PputGB1_0228 [Pseudomonas putida GB-1]
gi|166857734|gb|ABY96141.1| CBS domain containing protein [Pseudomonas putida GB-1]
Length = 145
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + NVGAL VV E V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKMLAEKNVGALPVV---EGNQVVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696482|ref|ZP_17670972.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388003923|gb|EIK65250.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK++++GRSS TKV DI
Sbjct: 22 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLRGRSSVGTKVSDI 78
Query: 135 MTEEV 139
M V
Sbjct: 79 MVSPV 83
>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
TERDY RK+++ RSSK+T+V +IMT +V
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMTSKV 84
>gi|148545482|ref|YP_001265584.1| hypothetical protein Pput_0225 [Pseudomonas putida F1]
gi|397697387|ref|YP_006535270.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|421525151|ref|ZP_15971772.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
gi|148509540|gb|ABQ76400.1| CBS domain containing protein [Pseudomonas putida F1]
gi|397334117|gb|AFO50476.1| CBS domain-containing protein [Pseudomonas putida DOT-T1E]
gi|402751614|gb|EJX12127.1| hypothetical protein PPUTLS46_25013 [Pseudomonas putida LS46]
Length = 145
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILK K + + DD+V DA+K + + N+GAL VV+ G+ V GI++ERD
Sbjct: 3 TVEQILKTKSQHQ--TVYTIGPDDSVLDALKLLAEKNIGALPVVEGGQ---VVGIVSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS +T V +IM+ V
Sbjct: 58 YARKLVLKGRSSAATPVREIMSAPV 82
>gi|357416661|ref|YP_004929681.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
gi|355334239|gb|AER55640.1| hypothetical protein DSC_04935 [Pseudoxanthomonas spadix BD-a59]
Length = 136
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G + T D V++AV+ M QH VGA++V++ + + GI++ERDY RK+++ RS
Sbjct: 4 GKTAELVTVTPDQPVFEAVRKMDQHGVGAVLVMRG---QVLVGILSERDYARKVVLLERS 60
Query: 126 SKSTKVGDIMTEEV 139
S+ST+V IMT EV
Sbjct: 61 SRSTRVEQIMTTEV 74
>gi|377820853|ref|YP_004977224.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935688|gb|AET89247.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 185
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +LKAK +D + + +VY+AV M++ VGALVV G +V GI+TERD
Sbjct: 20 TVKQVLKAK---SDAAVHTIDAEASVYEAVALMSRAEVGALVVTVGG---AVCGIVTERD 73
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I+Q ++S++T V +IMT +
Sbjct: 74 YARKVILQDKASRTTTVCEIMTAPI 98
>gi|389808996|ref|ZP_10205088.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
gi|388442270|gb|EIL98478.1| signal transduction protein [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMT 136
GRSS T V DIM+
Sbjct: 64 GRSSSQTAVSDIMS 77
>gi|352079994|ref|ZP_08951063.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|389797851|ref|ZP_10200888.1| signal transduction protein [Rhodanobacter sp. 116-2]
gi|351684703|gb|EHA67772.1| putative signal transduction protein with CBS domains
[Rhodanobacter sp. 2APBS1]
gi|388446514|gb|EIM02543.1| signal transduction protein [Rhodanobacter sp. 116-2]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG + + V DA+K M +H +GAL+V++ GEQ + G+++ERDY RK+I+Q
Sbjct: 9 QGKG--NAIYSIAPEAPVLDAIKHMAEHRIGALLVMR-GEQ--LVGVMSERDYARKVILQ 63
Query: 123 GRSSKSTKVGDIMT 136
GRSS T V DIM+
Sbjct: 64 GRSSSQTAVSDIMS 77
>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 163
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ L++K +W T T VYDAV M VGAL+VV G VAGI+TER
Sbjct: 3 SVAQFLRSKAS----QTVWSTQASTSVYDAVAIMAHRRVGALIVVHEGR---VAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS++T V DIM+ V
Sbjct: 56 DYARKIALMHRSSRNTPVRDIMSTTV 81
>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
Length = 154
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 8/89 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD--DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
S T++ IL++K D T + D+VY+A+K M + ++GAL+V+ + +AGI+
Sbjct: 2 SLTVAHILRSK---PDSGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMDGAD---IAGIV 55
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
TERDY RK+++ RSSK+T+V +IMT +V
Sbjct: 56 TERDYARKVVLLDRSSKATRVEEIMTSKV 84
>gi|423096128|ref|ZP_17083924.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887608|gb|EJL04091.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 129
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ DD V A+ M + NVGAL+VVK E V GII+ERDY RK+++ GRSS TKV DI
Sbjct: 5 SPDDMVLQALMRMAEKNVGALLVVKNDE---VLGIISERDYARKMVLHGRSSVGTKVSDI 61
Query: 135 MTEEV 139
M V
Sbjct: 62 MVSPV 66
>gi|378951751|ref|YP_005209239.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|359761765|gb|AEV63844.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L+ K + + + DD V A+ M + NVGAL+VVK E V GII+ERD
Sbjct: 3 TVAQLLRIKDE-KNQQVHTISPDDMVLQALMRMAEKNVGALLVVKNEE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS TKV DIM V
Sbjct: 59 YARKMVLRGRSSVGTKVSDIMVSPV 83
>gi|330802860|ref|XP_003289430.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
gi|325080472|gb|EGC34026.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
Length = 196
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 47 EEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
E F T + +I+K+K + + ++ +DT+Y A+K M +H +GAL+V + S+
Sbjct: 93 EYFAFGDTPVGEIIKSK---HEKNIIFIKENDTIYQAIKEMDKHGIGALLVTSEKDG-SL 148
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
GI TERDYL K+ + + SK+TKV + MT V
Sbjct: 149 IGIFTERDYLGKVALLDKDSKTTKVSEAMTRNV 181
>gi|260219992|emb|CBA27084.1| Uncharacterized protein At5g10860, mitochondrial [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 164
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 69 GSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G +W DD+VY A++ + NVGAL+V+ + + GI +ERDY RKI + GRSSK
Sbjct: 34 GGSVWSLNPDDSVYQALEMLADCNVGALMVM---DGDKLVGIFSERDYTRKIALSGRSSK 90
Query: 128 STKVGDIMTEEV 139
TKV DIMT +V
Sbjct: 91 DTKVKDIMTSQV 102
>gi|104779464|ref|YP_605962.1| hypothetical protein PSEEN0171 [Pseudomonas entomophila L48]
gi|95108451|emb|CAK13145.1| conserved hypothetical protein; CBS domain protein [Pseudomonas
entomophila L48]
Length = 145
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
K K + DD+V DA+K + + N+GAL VV E V GI++ERDY RK++++
Sbjct: 9 KNKSQPQAVYTIAPDDSVLDALKMLAEKNIGALPVV---ENDQVVGIVSERDYARKLVLK 65
Query: 123 GRSSKSTKVGDIMTEEV 139
GRSS T V +IM+ V
Sbjct: 66 GRSSPFTTVREIMSSPV 82
>gi|384440463|ref|YP_005655187.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291596|gb|AEV17113.1| CBS domain protein [Thermus sp. CCB_US3_UF1]
Length = 143
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + + TV +A+K++ QH++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GEVYAISPEATVLEALKALAQHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
Y RK+++ GR SK T+V ++MT +
Sbjct: 55 YARKLVLLGRFSKDTRVAEVMTPD 78
>gi|255086303|ref|XP_002509118.1| predicted protein [Micromonas sp. RCC299]
gi|226524396|gb|ACO70376.1| predicted protein [Micromonas sp. RCC299]
Length = 173
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 51 FESTTISDILKAKGKGAD--GSWLWCTTDDTVYDAVKSMTQHNVGALVVVK---PGEQKS 105
F TT++DIL AK + GS WC + V AV+ M +VGAL+V+ + +
Sbjct: 1 FNRTTLADILAAKHRTHTYWGSNHWCDASEPVAVAVRRMNSQDVGALLVMDRSASPQTGA 60
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ GI+TERDYLR + +G S T VGDIMT+
Sbjct: 61 MRGIVTERDYLRA-VARGAVSPGTAVGDIMTD 91
>gi|46199936|ref|YP_005603.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55980318|ref|YP_143615.1| hypothetical protein TTHA0349 [Thermus thermophilus HB8]
gi|46197563|gb|AAS81976.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
gi|55771731|dbj|BAD70172.1| CBS domain protein [Thermus thermophilus HB8]
Length = 143
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGERLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GR SK TKV ++MT +V
Sbjct: 55 YARKLVLLGRFSKDTKVREVMTTDV 79
>gi|386009867|ref|YP_005928144.1| hypothetical protein PPUBIRD1_0233 [Pseudomonas putida BIRD-1]
gi|313496573|gb|ADR57939.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
Length = 145
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV+ G+ V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVVEGGQ---VVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EEV 139
V
Sbjct: 80 APV 82
>gi|359781111|ref|ZP_09284336.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
gi|359371171|gb|EHK71737.1| hypothetical protein PPL19_08636 [Pseudomonas psychrotolerans L19]
Length = 144
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + NVGAL V++ GE + GI++ERDY RK+ +QGRSS +T V +IMT
Sbjct: 22 DAWVLDALRLMAEKNVGALPVMRDGE---LVGIVSERDYARKVALQGRSSYATPVSEIMT 78
Query: 137 EEV 139
E V
Sbjct: 79 EAV 81
>gi|83815791|ref|YP_446387.1| hypothetical protein SRU_2283 [Salinibacter ruber DSM 13855]
gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
Length = 160
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 50 GFESTTISDILKAKGKGAD-GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
G T + DI+++K AD G+ L + TV++ + M +VG++VV+ E ++AG
Sbjct: 6 GLLDTRVKDIIQSKSALADDGNVLTTSPTATVFECIGRMVDRDVGSIVVM---EGDAIAG 62
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ TER+Y++ I ++GRSS T+V ++MTE+V
Sbjct: 63 LFTERNYMQSIALEGRSSDETEVQEVMTEDV 93
>gi|393775714|ref|ZP_10364025.1| putative signal-transduction protein [Ralstonia sp. PBA]
gi|392717440|gb|EIZ05003.1| putative signal-transduction protein [Ralstonia sp. PBA]
Length = 146
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL+ K D + D V+DA++ M++ ++GA++V+ E + GI+TERD
Sbjct: 3 TVAAILQTK---PDRTVHTIRPDAPVFDAIRLMSEKSIGAVLVM---EGDEIVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI++ RSSKST V DIMT V
Sbjct: 57 YARKIVLMDRSSKSTPVRDIMTRAV 81
>gi|381206976|ref|ZP_09914047.1| signal-transduction protein with cbs domains [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 143
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V+DA+K M + N+GA++V+ E + + GI +ERDY RK+I+ GRSSK T+V ++
Sbjct: 19 TPDTSVFDALKVMNEKNIGAVLVM---EDEELVGIFSERDYARKVILAGRSSKITEVKEL 75
Query: 135 MTEEV 139
MT +V
Sbjct: 76 MTCKV 80
>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
suwonensis 11-1]
gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
[Pseudoxanthomonas suwonensis 11-1]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DAV+ M ++GA++V++ GE +AGI++ERDY RKI++QGRSS T V IMT
Sbjct: 21 DAPVIDAVRLMADKSIGAVLVMRGGE---LAGILSERDYARKIVLQGRSSADTPVRAIMT 77
Query: 137 EEV 139
EV
Sbjct: 78 AEV 80
>gi|408674029|ref|YP_006873777.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
gi|387855653|gb|AFK03750.1| putative signal transduction protein with CBS domains [Emticicia
oligotrophica DSM 17448]
Length = 145
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I IL+ K A T+ TVYDA+ M N+GA++V+ G+ ++GI +ERDY
Sbjct: 3 IRQILQGKKINA---LFSVTSSTTVYDALVEMADKNIGAVLVIDEGK---LSGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RKI+++GR S T V D+MT V
Sbjct: 57 ARKIVLKGRHSDDTPVSDVMTANV 80
>gi|404400937|ref|ZP_10992521.1| hypothetical protein PfusU_14281 [Pseudomonas fuscovaginae UPB0736]
Length = 147
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK KG + D TV++A+ M + NVGAL VV E+ V GII+ERD
Sbjct: 3 TVAELLKLKGSQRQEVY-TVRNDHTVFEALIKMAEKNVGALPVVD--ERGLVVGIISERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I+ G SS TKV +IM V
Sbjct: 60 YARKVILHGLSSVKTKVCEIMNAPV 84
>gi|91776712|ref|YP_546468.1| signal-transduction protein [Methylobacillus flagellatus KT]
gi|91710699|gb|ABE50627.1| putative signal-transduction protein with CBS domains
[Methylobacillus flagellatus KT]
Length = 142
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + VYDA+ M +H++GALVV+ ++ + GI +ERD
Sbjct: 3 TVRQVLETKG----STVYSVAPESLVYDALLLMAEHHIGALVVM---QRDKMVGIFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y R+++++G++SK+T VGDIM+
Sbjct: 56 YAREVVIKGKTSKTTTVGDIMS 77
>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 148
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG GA + +V+DA+ M +H++GA++V E + GI TERD
Sbjct: 5 TVRQILETKGAGAHA----VSPGVSVFDALAVMAKHDIGAVLVT---ENDHLTGIFTERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++G SSK VG++MT V
Sbjct: 58 YARKLVLKGLSSKEATVGELMTPNV 82
>gi|339485118|ref|YP_004699646.1| hypothetical protein PPS_0177 [Pseudomonas putida S16]
gi|338835961|gb|AEJ10766.1| CBS domain-containing protein [Pseudomonas putida S16]
Length = 145
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V DA+K + + NVGAL VV E V GI++ERDY RK++++GRSS +T V +IM+
Sbjct: 23 DDSVLDALKLLAEKNVGALPVV---EGNQVVGIVSERDYARKLVLKGRSSAATPVREIMS 79
Query: 137 EEV 139
V
Sbjct: 80 APV 82
>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 164
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+++ +L++K +W T +VYDA+ M VGAL+V G +AGI+TER
Sbjct: 3 SVAQLLRSK----TSQRVWSTQASASVYDAIAVMAHRQVGALIVAHEGR---IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ RSS+ T V DIM+ V
Sbjct: 56 DYARKIVLMDRSSRHTPVRDIMSTAV 81
>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
DSM 74]
gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
linguale DSM 74]
Length = 145
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
++D TV D +K M + N+GAL+VV GE + GI +ERDY RK+I++ R S T++ D
Sbjct: 18 VSSDQTVLDGLKVMAEKNIGALLVVDNGE---LTGIFSERDYARKVILKDRHSDDTRIAD 74
Query: 134 IMTEEV 139
+MT V
Sbjct: 75 VMTANV 80
>gi|398875935|ref|ZP_10631096.1| CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398884298|ref|ZP_10639237.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398195002|gb|EJM82059.1| CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398205711|gb|EJM92491.1| CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
Length = 136
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 72 LW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
LW DD+V+ A++ + H +GAL+V+ G + G+++ERDY RK+ +QGR+S+ T+
Sbjct: 9 LWHVHPDDSVFAALELLAAHEIGALLVMDGGR---LVGVVSERDYTRKVALQGRNSRETR 65
Query: 131 VGDIMTEEV 139
V +IMT +V
Sbjct: 66 VAEIMTRDV 74
>gi|399000051|ref|ZP_10702782.1| CBS domain-containing protein [Pseudomonas sp. GM18]
gi|398130463|gb|EJM19800.1| CBS domain-containing protein [Pseudomonas sp. GM18]
Length = 146
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEEGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|397688746|ref|YP_006526065.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
gi|395810302|gb|AFN79707.1| hypothetical protein PSJM300_18270 [Pseudomonas stutzeri DSM 10701]
Length = 144
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+++ TV + +++M +HNVGAL VV GE + GI++ERDY RKI++QGRSS T V I
Sbjct: 20 SSEATVLEFLQAMAEHNVGALPVVDDGE---LVGIVSERDYARKIVLQGRSSVGTPVSTI 76
Query: 135 MTEEV 139
M+ V
Sbjct: 77 MSSPV 81
>gi|120610791|ref|YP_970469.1| hypothetical protein Aave_2114 [Acidovorax citrulli AAC00-1]
gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 149
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DIL++K A D++ DA++ M +GAL+V+ GE+ +AGI+TER
Sbjct: 2 TAVADILRSK---AHQEVFTIAPSDSMLDALRLMADKGIGALLVMD-GER--IAGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + GR+S T+V D+MT V
Sbjct: 56 DYARKVALLGRTSGDTRVADVMTRAV 81
>gi|407364886|ref|ZP_11111418.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas mandelii JR-1]
Length = 146
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A+K M + NVGAL V+ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALKLMAEKNVGALPVIDKGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EEV 139
V
Sbjct: 81 SPV 83
>gi|398858953|ref|ZP_10614637.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238054|gb|EJN23791.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|398840530|ref|ZP_10597765.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398110489|gb|EJM00392.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DQMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|385204300|ref|ZP_10031170.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385184191|gb|EIF33465.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 164
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ +L++K S C + VYDA+ M VGAL+V G +AGI+TERD
Sbjct: 3 SVAQLLRSKASQRVWSTQACAS---VYDAIAVMAHRRVGALIVAHEGR---IAGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI++ RSS+ T V DIM+ V
Sbjct: 57 YARKIVLMDRSSRHTPVRDIMSTAV 81
>gi|395803543|ref|ZP_10482789.1| signal-transduction protein [Flavobacterium sp. F52]
gi|395434355|gb|EJG00303.1| signal-transduction protein [Flavobacterium sp. F52]
Length = 141
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ ILKAKG+ + ++ TVYDA+K M + N+GA++V+ + + GI++ERD
Sbjct: 2 TVDQILKAKGRNVYSIF----SNLTVYDALKVMGEKNIGAILVM---DDNVLKGILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI+++ +SSK T V +IM V
Sbjct: 55 YARKIVLKDKSSKETFVHEIMESHV 79
>gi|386359497|ref|YP_006057742.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383508524|gb|AFH37956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 143
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GR SK TKV ++MT +V
Sbjct: 55 YARKLVLLGRFSKDTKVREVMTTDV 79
>gi|429331441|ref|ZP_19212197.1| CBS domain-containing protein [Pseudomonas putida CSV86]
gi|428763853|gb|EKX86012.1| CBS domain-containing protein [Pseudomonas putida CSV86]
Length = 146
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D + TV +A+ M + NVGAL VV+ GE V GI++ERD
Sbjct: 3 TVAQLLKLKSQHTDQVY-TIAPHQTVLEALMVMAEKNVGALPVVEGGE---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T+V +IM+ V
Sbjct: 59 YARKMVLKGRSSVGTEVREIMSSPV 83
>gi|399033777|ref|ZP_10732321.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
gi|398067844|gb|EJL59317.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Flavobacterium sp. CF136]
Length = 141
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL AKGK S L TT VY+A+K M + N+GA++V+ E K GI++ERD
Sbjct: 2 TVNQILNAKGKNV-YSVLSSTT---VYEALKVMGEKNIGAILVMDGSELK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIM 135
Y RKI+++ +SSK T V +IM
Sbjct: 55 YARKIVLKDKSSKETFVHEIM 75
>gi|118595092|ref|ZP_01552439.1| CBS [Methylophilales bacterium HTCC2181]
gi|118440870|gb|EAV47497.1| CBS [Methylophilales bacterium HTCC2181]
Length = 150
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+++DA+ M Q+ +GAL+V+K + + GII+ERDY R+I ++GRSS+ TKV +IMT++
Sbjct: 31 SIFDALTIMAQYKIGALIVMKGSK---MVGIISERDYAREIFIEGRSSRDTKVQEIMTKK 87
Query: 139 V 139
V
Sbjct: 88 V 88
>gi|440738083|ref|ZP_20917628.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|447916261|ref|YP_007396829.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
gi|440381426|gb|ELQ17958.1| hypothetical protein A986_07475 [Pseudomonas fluorescens BRIP34879]
gi|445200124|gb|AGE25333.1| hypothetical protein H045_06295 [Pseudomonas poae RE*1-1-14]
Length = 146
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK G +V GII+E
Sbjct: 3 TVAQLLKAKDQKHHDVHTIQW---DHTVFEALVRMSEKNVGALPVVKDG---AVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+I++G SS +T+V +M+ V
Sbjct: 57 RDYARKLILKGLSSVTTRVDQVMSSPV 83
>gi|398945962|ref|ZP_10671970.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
gi|398155799|gb|EJM44231.1| CBS domain-containing protein [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+ V +A++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DEMVLEALRIMAEKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRDIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|395220025|ref|ZP_10402617.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
gi|394453756|gb|EJF08577.1| signal transduction protein with CBS domains [Pontibacter sp.
BAB1700]
Length = 145
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG + TVY A+++M + NVGAL+V+ G+ AG+ TERD
Sbjct: 3 TVRHILQKKG----NKVISVAPTSTVYSALETMVEQNVGALIVMDNGK---FAGMFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE 137
Y RK+I++G++S+ T V +IM+E
Sbjct: 56 YARKVILKGKASRDTLVQEIMSE 78
>gi|398905812|ref|ZP_10653134.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398174118|gb|EJM61925.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V +IM+
Sbjct: 24 DRMVLDALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVREIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
Length = 143
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSIFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS ST V DIMT +V
Sbjct: 56 DYTRKIALMERSSNSTLVADIMTSKV 81
>gi|408482496|ref|ZP_11188715.1| hypothetical protein PsR81_18138 [Pseudomonas sp. R81]
Length = 146
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LKAK + + D TV++A+ M++ NVGAL VV+ G V GII+ERD
Sbjct: 3 TVAQVLKAKDQ-KNQEVHVIKHDHTVFEALVRMSEKNVGALPVVQDG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI+++G SS +TKV ++M+ V
Sbjct: 59 YARKIMLKGLSSVTTKVHEVMSSPV 83
>gi|338213210|ref|YP_004657265.1| signal transduction protein with CBS domains [Runella slithyformis
DSM 19594]
gi|336307031|gb|AEI50133.1| putative signal transduction protein with CBS domains [Runella
slithyformis DSM 19594]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ++L+ K + A T + TV DA+K M N+GA++V++ G+ +AGI +ERDY
Sbjct: 3 IKNVLRDKTRNA---IFSVTPETTVLDALKQMADKNIGAVLVLEEGK---LAGIFSERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
RK I+QGR+S T + ++MT
Sbjct: 57 ARKGILQGRASNQTLIKEVMT 77
>gi|398949768|ref|ZP_10673432.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426409536|ref|YP_007029635.1| CBS domain-containing protein [Pseudomonas sp. UW4]
gi|398158878|gb|EJM47209.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|426267753|gb|AFY19830.1| CBS domain-containing protein [Pseudomonas sp. UW4]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D VY+A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVYEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|398872534|ref|ZP_10627822.1| CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398202271|gb|EJM89118.1| CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV DA++ M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQTVLDALRMMAEKNVGALPVMEEGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|381191507|ref|ZP_09899017.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
gi|384430235|ref|YP_005639595.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333965703|gb|AEG32468.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380450867|gb|EIA38481.1| hypothetical protein RLTM_11548 [Thermus sp. RL]
Length = 143
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G + TV DA++ + +H++GAL+V+ E + GI TERD
Sbjct: 2 TVRQVLVHKGGGVHA----IHPEATVLDALRKLAEHDIGALLVM---EGDRLLGIFTERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GR SK TKV ++MT
Sbjct: 55 YARKLVLLGRFSKDTKVREVMT 76
>gi|398810185|ref|ZP_10569015.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
gi|398083876|gb|EJL74580.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Variovorax sp. CF313]
Length = 142
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALSTLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+ +QG++SK KV DIMT +V
Sbjct: 56 YTRKVALQGKNSKEVKVRDIMTPDV 80
>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 143
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AEQSVFTISPNSTVLEAIKIMADKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS ST V DIMT +V
Sbjct: 56 DYTRKIALMERSSNSTLVADIMTSKV 81
>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
DSM 2588]
gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
pinensis DSM 2588]
Length = 120
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+Y+A++ + + N+GALVVV E+ + GI TERDY RK++++GRSSK T V DIMT+
Sbjct: 1 MYEALEVLEEKNLGALVVVDESEK--LIGIFTERDYARKVVLKGRSSKETYVRDIMTD 56
>gi|56478309|ref|YP_159898.1| hypothetical protein ebB175 [Aromatoleum aromaticum EbN1]
gi|56314352|emb|CAI08997.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 147
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK K D + D +V+DA+ M +HNVGAL+V+ E + +AGI++ERD
Sbjct: 3 SVAAILKEK---PDPTVHTIGPDASVFDALGRMAEHNVGALLVM---EGERLAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I+ RSS+ V IM+ V
Sbjct: 57 YARKVILLARSSRDLTVSAIMSSPV 81
>gi|389776666|ref|ZP_10194097.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
gi|388436468|gb|EIL93332.1| putative signal transduction protein [Rhodanobacter spathiphylli
B39]
Length = 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 69 GSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
G+ ++ +T V +A+K M +H VGAL+V+ GE+ + G+++ERDY RK+I+QGRSS
Sbjct: 12 GNAIYRVAPETPVLEAIKHMAEHRVGALLVMH-GEK--LVGVMSERDYARKVILQGRSSS 68
Query: 128 STKVGDIMT 136
T V DIMT
Sbjct: 69 QTAVSDIMT 77
>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
Length = 168
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L C+ D +++DAV SM++ N GA++VV P K V G++TERD + K++ ++ T V
Sbjct: 13 LTCSPDTSIFDAVTSMSEKNFGAVIVVDP--DKKVLGVVTERDVMNKLVALELDARKTAV 70
Query: 132 GDIMTEE 138
DIMT++
Sbjct: 71 SDIMTKD 77
>gi|373954157|ref|ZP_09614117.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
gi|373890757|gb|EHQ26654.1| putative signal transduction protein with CBS domains
[Mucilaginibacter paludis DSM 18603]
Length = 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 53/82 (64%), Gaps = 9/82 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I +IL+ KG ++ + +T VYDA+ M + N+ +L+++ E + + GI TERD
Sbjct: 4 IRNILENKGH-----QVYAVSPETSVYDALHMMMEKNISSLLIM---ENEVLKGIFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RK+++ GRSS+ T +G+IMT
Sbjct: 56 YARKLVLMGRSSRETPIGEIMT 77
>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 148
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ IL+AKG ++ D+V+DA+ M Q ++G ++V + + GI TER
Sbjct: 3 TTVKQILEAKGS----TFHAVRPTDSVFDALSLMAQFDIGCVLVT---DSDKLVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY RK++++G S+ KVGD+MT
Sbjct: 56 DYARKVVLKGLVSRDVKVGDLMT 78
>gi|423691049|ref|ZP_17665569.1| CBS domain protein [Pseudomonas fluorescens SS101]
gi|387999980|gb|EIK61309.1| CBS domain protein [Pseudomonas fluorescens SS101]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKI+++G SS +TKV ++M+ V
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMSSPV 83
>gi|229589653|ref|YP_002871772.1| hypothetical protein PFLU2156 [Pseudomonas fluorescens SBW25]
gi|229361519|emb|CAY48395.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M++ NVGAL V+K G V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-KNQEVHTIKHDHTVFEALVRMSEKNVGALPVIKEG---VVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I++G SS +T+V ++M+ V
Sbjct: 59 YARKLILKGLSSVTTRVDEVMSSPV 83
>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
[Chthoniobacter flavus Ellin428]
Length = 146
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TVY+A++ M + N+GAL VV G + GI+TERDY RK+I++G+SSK T V IM+
Sbjct: 24 DATVYEAIELMAEKNIGALPVVDRGR---LLGILTERDYARKVILEGKSSKDTSVSAIMS 80
>gi|387893315|ref|YP_006323612.1| hypothetical protein PflA506_2125 [Pseudomonas fluorescens A506]
gi|387159645|gb|AFJ54844.1| CBS domain protein [Pseudomonas fluorescens A506]
Length = 146
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK V GII+E
Sbjct: 3 TVAQLLKAKDQKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK---DDVVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKI+++G SS +TKV ++M+ V
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMSSPV 83
>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 142
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV++A+K + + VGAL V++ G+ +AGI++ERDY RK+ + G++SK T V DIMT +
Sbjct: 23 TVFEALKLLANYGVGALTVMENGK---LAGIVSERDYTRKVALMGKNSKETTVADIMTRD 79
Query: 139 V 139
V
Sbjct: 80 V 80
>gi|15595447|ref|NP_248941.1| hypothetical protein PA0250 [Pseudomonas aeruginosa PAO1]
gi|218888991|ref|YP_002437855.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|254237513|ref|ZP_04930836.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243349|ref|ZP_04936671.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|418583816|ref|ZP_13147884.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418594207|ref|ZP_13158019.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|420136594|ref|ZP_14644637.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|421151184|ref|ZP_15610809.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|421157237|ref|ZP_15616627.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|421168865|ref|ZP_15626921.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|421181478|ref|ZP_15638977.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|421514863|ref|ZP_15961549.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|424943371|ref|ZP_18359134.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|451983277|ref|ZP_21931569.1| CBS domain protein [Pseudomonas aeruginosa 18A]
gi|9946090|gb|AAG03639.1|AE004463_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126169444|gb|EAZ54955.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196727|gb|EAZ60790.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769214|emb|CAW24974.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
gi|346059817|dbj|GAA19700.1| putative CBS domain [Pseudomonas aeruginosa NCMG1179]
gi|375044722|gb|EHS37315.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P2]
gi|375046794|gb|EHS39350.1| putative CBS domain protein [Pseudomonas aeruginosa MPAO1/P1]
gi|403250656|gb|EJY64069.1| hypothetical protein PACIG1_0140 [Pseudomonas aeruginosa CIG1]
gi|404348591|gb|EJZ74928.1| putative CBS domain protein [Pseudomonas aeruginosa PAO579]
gi|404527814|gb|EKA37946.1| hypothetical protein PABE171_0154 [Pseudomonas aeruginosa ATCC
14886]
gi|404528367|gb|EKA38468.1| hypothetical protein PABE177_3707 [Pseudomonas aeruginosa ATCC
700888]
gi|404543595|gb|EKA52852.1| hypothetical protein PAE2_3441 [Pseudomonas aeruginosa E2]
gi|404550813|gb|EKA59529.1| hypothetical protein PABE173_0256 [Pseudomonas aeruginosa ATCC
25324]
gi|451759075|emb|CCQ84092.1| CBS domain protein [Pseudomonas aeruginosa 18A]
Length = 144
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T + IM+ V
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSAPV 81
>gi|49076464|gb|AAT49566.1| PA0250, partial [synthetic construct]
Length = 145
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGADEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T + IM+ V
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSAPV 81
>gi|304312239|ref|YP_003811837.1| hypothetical protein HDN1F_26110 [gamma proteobacterium HdN1]
gi|301797972|emb|CBL46194.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 147
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ D+LK K W DT V DA++ M VGALVV+ E+K V+GIITERD
Sbjct: 4 VRDLLKQKT----NQQTWTVQPDTKVLDALQLMADKGVGALVVM---EKKRVSGIITERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ RSS + V +IM++++
Sbjct: 57 YARKVVLMARSSHTATVSEIMSDQL 81
>gi|409397204|ref|ZP_11248142.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
gi|409118364|gb|EKM94764.1| hypothetical protein C211_17130 [Pseudomonas sp. Chol1]
Length = 145
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V+DA+K M + NVGAL V + + GI++ERDY RKI++QGRSS T V IMT
Sbjct: 22 EDSVFDALKLMAEKNVGALPVADASGR--LVGIVSERDYARKIVLQGRSSFVTPVSAIMT 79
Query: 137 EEV 139
+V
Sbjct: 80 SKV 82
>gi|398842413|ref|ZP_10599596.1| CBS domain-containing protein [Pseudomonas sp. GM102]
gi|398105786|gb|EJL95861.1| CBS domain-containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VV+ G+ V GI++ERDY RK+++QGRSS T V DIM+
Sbjct: 24 DQMVLEAIRVMAERNIGALPVVENGK---VIGIVSERDYARKMVLQGRSSAGTPVRDIMS 80
>gi|107099239|ref|ZP_01363157.1| hypothetical protein PaerPA_01000250 [Pseudomonas aeruginosa PACS2]
gi|116053963|ref|YP_788401.1| hypothetical protein PA14_03090 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296386735|ref|ZP_06876234.1| CBS domain-containing protein [Pseudomonas aeruginosa PAb1]
gi|313112175|ref|ZP_07797954.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|355646413|ref|ZP_09054412.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|386056315|ref|YP_005972837.1| putative CBS domain-containing protein [Pseudomonas aeruginosa M18]
gi|386063229|ref|YP_005978533.1| hypothetical protein NCGM2_0256 [Pseudomonas aeruginosa NCGM2.S1]
gi|392981658|ref|YP_006480245.1| hypothetical protein PADK2_01240 [Pseudomonas aeruginosa DK2]
gi|416864807|ref|ZP_11915531.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|416882033|ref|ZP_11921757.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|419756542|ref|ZP_14282890.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|421171943|ref|ZP_15629730.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|115589184|gb|ABJ15199.1| putative CBS domain [Pseudomonas aeruginosa UCBPP-PA14]
gi|310884456|gb|EFQ43050.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
39016]
gi|334834902|gb|EGM13819.1| CBS domain-containing protein [Pseudomonas aeruginosa 138244]
gi|334835425|gb|EGM14301.1| CBS domain-containing protein [Pseudomonas aeruginosa 152504]
gi|347302621|gb|AEO72735.1| putative CBS domain protein [Pseudomonas aeruginosa M18]
gi|348031788|dbj|BAK87148.1| CBS domain-containing protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354828553|gb|EHF12671.1| hypothetical protein HMPREF1030_03498 [Pseudomonas sp. 2_1_26]
gi|384397074|gb|EIE43489.1| hypothetical protein CF510_26438 [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317163|gb|AFM62543.1| CBS domain-containing protein [Pseudomonas aeruginosa DK2]
gi|404538684|gb|EKA48207.1| hypothetical protein PACI27_0206 [Pseudomonas aeruginosa CI27]
gi|453045303|gb|EME93023.1| hypothetical protein H123_17208 [Pseudomonas aeruginosa PA21_ST175]
Length = 144
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+VV GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVVNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T + IM+ V
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSAPV 81
>gi|425745537|ref|ZP_18863581.1| CBS domain protein [Acinetobacter baumannii WC-323]
gi|425488545|gb|EKU54880.1| CBS domain protein [Acinetobacter baumannii WC-323]
Length = 143
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS +T V DIMT +V
Sbjct: 56 DYTRKIALMERSSNNTPVADIMTSKV 81
>gi|389684621|ref|ZP_10175949.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|388551844|gb|EIM15109.1| CBS domain protein [Pseudomonas chlororaphis O6]
Length = 146
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVIEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|224827002|ref|ZP_03700100.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
gi|224600835|gb|EEG07020.1| putative signal transduction protein with CBS domains
[Pseudogulbenkiania ferrooxidans 2002]
Length = 151
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R++++QGR+S T V +IMT V
Sbjct: 57 YARRVVLQGRTSAGTHVREIMTSRV 81
>gi|347538281|ref|YP_004845705.1| hypothetical protein NH8B_0456 [Pseudogulbenkiania sp. NH8B]
gi|345641458|dbj|BAK75291.1| CBS domain protein [Pseudogulbenkiania sp. NH8B]
Length = 151
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L +K + ++ + D TV+ A++ M + NVGA++V+ + V GI +ERD
Sbjct: 3 TVRQLLDSK---PNRQLIFVSPDATVFQALQVMAEQNVGAVLVMHACD---VHGIFSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R++++QGR+S T V +IMT V
Sbjct: 57 YARRVVLQGRTSAGTHVREIMTSRV 81
>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
Length = 146
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V GI++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGIVSERDYARKVVLKGRSSVGTPVRDIMNS 81
Query: 138 EV 139
V
Sbjct: 82 PV 83
>gi|312960091|ref|ZP_07774603.1| CBS domain protein [Pseudomonas fluorescens WH6]
gi|311285585|gb|EFQ64154.1| CBS domain protein [Pseudomonas fluorescens WH6]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 59/87 (67%), Gaps = 8/87 (9%)
Query: 55 TISDILKAKG-KGADGSWL-WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T++ +LKAK K D + W D TV++A+ M++ NVGAL VVK G+ V GII+E
Sbjct: 3 TVAQLLKAKDHKNQDVHTIKW---DHTVFEALVRMSEKNVGALPVVK-GD--VVVGIISE 56
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RKI+++G SS +TKV ++M+ V
Sbjct: 57 RDYARKIMLKGLSSVTTKVHEVMSSPV 83
>gi|409097786|ref|ZP_11217810.1| hypothetical protein PagrP_05001 [Pedobacter agri PB92]
Length = 142
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V DA+K MT N+ A++V+K + ++GI TERDY RKII+QG+SSK T + ++MT
Sbjct: 23 SVLDALKVMTDKNISAVLVMK---NEKLSGIFTERDYARKIILQGKSSKDTLINEVMT 77
>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
[Erythrobacter sp. NAP1]
Length = 172
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L CT D V+DAV M + N G++ V P + V G++TERD R++I R K+T V
Sbjct: 16 LTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNR--VLGVMTERDIFRRVIGASRDPKTTPV 73
Query: 132 GDIMTEEV 139
++MT EV
Sbjct: 74 SEVMTTEV 81
>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
Ellin514]
Length = 149
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
S TI IL KGK +W TVY+AV+ M + NVGAL+V+ E + G+ +
Sbjct: 4 SGTIDSILNYKGKQ-----IWSIQPFATVYEAVEKMAEKNVGALLVM---ENDRLVGMFS 55
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERDY RK+++ G+SS+ T V +I++ V
Sbjct: 56 ERDYTRKVVLHGKSSRQTLVREIISRPV 83
>gi|398989485|ref|ZP_10692726.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
gi|399015857|ref|ZP_10718114.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398107339|gb|EJL97341.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM16]
gi|398147643|gb|EJM36346.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM24]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E + V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDEKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVANV 83
>gi|320449248|ref|YP_004201344.1| hypothetical protein TSC_c01460 [Thermus scotoductus SA-01]
gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
Length = 143
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G TV +A++ + +H++GAL+V+ E + + GI +ERD
Sbjct: 2 TVRQVLLRKG----GGVYSVHPQATVLEALRKLAEHDIGALLVM---EGERLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GR SK T+V ++MT EV
Sbjct: 55 YARKLVLLGRFSKGTRVEEVMTREV 79
>gi|365097177|ref|ZP_09331422.1| signal-transduction protein [Acidovorax sp. NO-1]
gi|363413471|gb|EHL20667.1| signal-transduction protein [Acidovorax sp. NO-1]
Length = 145
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D S T +V DA++ M ++GAL+V E +++ GI TER
Sbjct: 2 TIVAKILQSK---PDASVHTITPAASVLDALRLMADKSIGALIVT---EGEAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR+S T+V D+MT V
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMTSAV 81
>gi|388544286|ref|ZP_10147574.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
gi|388277469|gb|EIK97043.1| hypothetical protein PMM47T1_07876 [Pseudomonas sp. M47T1]
Length = 146
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++++LK K + + D V +A++ M + NVGAL V+K G +V GI++ERD
Sbjct: 3 TVAELLKLKAQ-HNQQVHTIGPDQMVVEALRLMAEKNVGALPVIKDG---AVVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V +IM+ +V
Sbjct: 59 YARKVVLLGRSSVGTPVSEIMSAKV 83
>gi|413962639|ref|ZP_11401866.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413928471|gb|EKS67759.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 168
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+T+ +LKAK D + + +VY+A+ M++ VGALVVV G+ +V GI+TER
Sbjct: 2 STVKQVLKAK---RDTTVHTIDAEASVYEAIALMSRAEVGALVVVV-GD--AVCGIVTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+I+Q + S++T V +IMT V
Sbjct: 56 DYARKVILQDKVSRTTTVCEIMTAPV 81
>gi|359430476|ref|ZP_09221485.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
gi|358234116|dbj|GAB03024.1| hypothetical protein ACT4_040_00360 [Acinetobacter sp. NBRC 100985]
Length = 143
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M + VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMAEKGVGALVV---AEDEKVIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS +T V DIMT +V
Sbjct: 56 DYTRKIALMERSSNNTPVSDIMTSKV 81
>gi|398880462|ref|ZP_10635507.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
gi|398886794|ref|ZP_10641650.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398994575|ref|ZP_10697474.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|407363979|ref|ZP_11110511.1| signal transduction protein [Pseudomonas mandelii JR-1]
gi|398131896|gb|EJM21192.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398188021|gb|EJM75340.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM60]
gi|398192664|gb|EJM79804.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM67]
Length = 146
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|398922044|ref|ZP_10660088.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398929099|ref|ZP_10663757.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
gi|398163542|gb|EJM51697.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM49]
gi|398167513|gb|EJM55573.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM48]
Length = 146
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|152986795|ref|YP_001345731.1| hypothetical protein PSPA7_0335 [Pseudomonas aeruginosa PA7]
gi|452877772|ref|ZP_21955028.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
gi|150961953|gb|ABR83978.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452185497|gb|EME12515.1| hypothetical protein G039_12481 [Pseudomonas aeruginosa VRFPA01]
Length = 144
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L AK + D+ V DA++ M + N+GAL+V+ GE V G+++ERD
Sbjct: 3 TVAQLLNAK---QNQQVYTIGPDEMVLDALRLMAEKNIGALLVLNHGE---VVGVVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T + IM+ V
Sbjct: 57 YARKMVLKGRSSIGTPISAIMSAPV 81
>gi|424071979|ref|ZP_17809400.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407998122|gb|EKG38545.1| CBS domain-containing protein [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 146
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVKDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|398955427|ref|ZP_10676421.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
gi|398151033|gb|EJM39596.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM33]
Length = 146
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|426408540|ref|YP_007028639.1| signal transduction protein [Pseudomonas sp. UW4]
gi|426266757|gb|AFY18834.1| signal transduction protein [Pseudomonas sp. UW4]
Length = 146
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|398872952|ref|ZP_10628224.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
gi|398201096|gb|EJM87986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM74]
Length = 146
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---ENDEVLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|398993134|ref|ZP_10696090.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
gi|398135560|gb|EJM24673.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM21]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKMMAEKNVGALPVIEDGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|399007025|ref|ZP_10709541.1| CBS domain-containing protein [Pseudomonas sp. GM17]
gi|398120982|gb|EJM10625.1| CBS domain-containing protein [Pseudomonas sp. GM17]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|398922492|ref|ZP_10660300.1| CBS domain-containing protein [Pseudomonas sp. GM49]
gi|398162684|gb|EJM50870.1| CBS domain-containing protein [Pseudomonas sp. GM49]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + NVGAL V+ EQ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALKLMAEKNVGALPVM---EQGQVVGVISERDYARKVVLQGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
S110]
gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus S110]
Length = 142
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ DT V+DA+ ++ + VGAL+V+ G++ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPDTSVFDALATLARFEVGALMVMD-GDR--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+ +QG++SK KV +IMT +V
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPDV 80
>gi|402758061|ref|ZP_10860317.1| hypothetical protein ANCT7_10176 [Acinetobacter sp. NCTC 7422]
Length = 143
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS +T V DIMT +V
Sbjct: 56 DYTRKIALMERSSNNTPVADIMTSKV 81
>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V +A+ M + NVGAL+VV E +V GII+ERD
Sbjct: 3 TVAQLLKLKDP-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDNVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVANV 83
>gi|398853662|ref|ZP_10610258.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
gi|398238902|gb|EJN24622.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM80]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVANV 83
>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA+K M N+GAL VV+ G+ V G+++ERDY RK++++GRSS T V DIM
Sbjct: 25 EMVLDALKLMADKNIGALAVVENGQ---VVGVVSERDYARKVVLKGRSSVGTPVRDIMNS 81
Query: 138 EV 139
V
Sbjct: 82 PV 83
>gi|424067347|ref|ZP_17804803.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408000955|gb|EKG41290.1| CBS [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 146
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVV---EGNRVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|410698094|gb|AFV77162.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus oshimai JL-2]
Length = 143
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G+ + TV +A+K + +H+VGAL+V+ E + GI +ERD
Sbjct: 2 TVRQLLLRKG----GAVYRIRPEATVLEALKELARHDVGALLVM---EGDRLLGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTE 137
Y RK+++ GR SK T V ++MTE
Sbjct: 55 YARKLVLLGRFSKDTLVREVMTE 77
>gi|350545690|ref|ZP_08915153.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
gi|350526536|emb|CCD40224.1| FOG: CBS domain [Candidatus Burkholderia kirkii UZHbot1]
Length = 167
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 23 TVAQVLNSK---PDQTVYTIAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 76
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ R+SK T V DIMT V
Sbjct: 77 YARKVVLMDRASKQTPVHDIMTSHV 101
>gi|222875041|gb|EEF12172.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++DILK+K A G+ D+V DA++ M +GAL+V+ E +AGI+TER
Sbjct: 81 TAVADILKSK---ASGAVYSIAPTDSVLDALRLMADKGIGALLVM---EGSEIAGIVTER 134
Query: 114 DYLRKIIVQGRSSKST 129
DY RKI + GR+S +T
Sbjct: 135 DYARKIALLGRTSGAT 150
>gi|373458680|ref|ZP_09550447.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
gi|371720344|gb|EHO42115.1| putative signal transduction protein with CBS domains [Caldithrix
abyssi DSM 13497]
Length = 144
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A++ M NVGAL+VVK G+ V GII+ERD RK+ ++GR +K T V DIMT
Sbjct: 23 TVLEALQKMADKNVGALLVVKDGQ---VKGIISERDCARKLDIKGRCAKDTPVKDIMTTH 79
Query: 139 V 139
V
Sbjct: 80 V 80
>gi|398980397|ref|ZP_10688956.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
gi|398134600|gb|EJM23747.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM25]
Length = 146
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVV---EDDKVVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVANV 83
>gi|304309718|ref|YP_003809316.1| hypothetical protein HDN1F_00660 [gamma proteobacterium HdN1]
gi|301795451|emb|CBL43649.1| CBS domain protein [gamma proteobacterium HdN1]
Length = 146
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
+ DIL++K ++++ D+ V DA+K M++ VGAL+V E V G+I+ER
Sbjct: 3 NVRDILRSKP----SAYVYSVRPDSKVLDAIKLMSEKGVGALLVT---ENDKVVGVISER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+++ RSS +V +IMT +V
Sbjct: 56 DYARKVVLMARSSHQAEVREIMTADV 81
>gi|146299410|ref|YP_001194001.1| signal-transduction protein [Flavobacterium johnsoniae UW101]
gi|146153828|gb|ABQ04682.1| putative signal-transduction protein with CBS domains
[Flavobacterium johnsoniae UW101]
Length = 141
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKGK + TVY+A+K M N+GA++++ + K GI++ERD
Sbjct: 2 TVDQILNAKGKNV----FSVRSTTTVYEALKVMGDKNIGAILIIDGTDLK---GILSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RKI+++ +SSK T V +IM V
Sbjct: 55 YARKIVLKDKSSKETFVHEIMESNV 79
>gi|377813056|ref|YP_005042305.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
gi|357937860|gb|AET91418.1| putative signal-transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 146
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVYTVAATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ R+SK T V DIMT +V
Sbjct: 57 YARKVVLMDRASKQTPVRDIMTSQV 81
>gi|425899648|ref|ZP_18876239.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890377|gb|EJL06859.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M Q NVGAL V++ G+ V G+I+ERDY RK+++QGRSS T V IM+
Sbjct: 24 DQMVLEALQMMAQKNVGALPVMEAGQ---VVGVISERDYARKVVLQGRSSVGTPVRVIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|409418943|ref|ZP_11258905.1| hypothetical protein PsHYS_07040 [Pseudomonas sp. HYS]
Length = 146
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V DA++ M + NVGAL VV+ G V GI++ERD
Sbjct: 3 TVAQLLKTKAQ-QHHQVHTIGPDHMVLDALRLMAEKNVGALPVVQDGR---VVGIVSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V IM+ V
Sbjct: 59 YARKMVLKGRSSVGTPVSAIMSAPV 83
>gi|406037632|ref|ZP_11044996.1| hypothetical protein AparD1_11924 [Acinetobacter parvus DSM 16617 =
CIP 108168]
Length = 143
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + R+S+ST V DIMT +V
Sbjct: 56 DYTRKIALMERTSESTLVSDIMTSKV 81
>gi|262372502|ref|ZP_06065781.1| CBS domain-containing protein [Acinetobacter junii SH205]
gi|262312527|gb|EEY93612.1| CBS domain-containing protein [Acinetobacter junii SH205]
Length = 143
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A S + + TV +A+K M VGALVV E + V GI +ER
Sbjct: 2 TIVAQVIKNK---AVQSIFTISPNATVLEAIKIMADKGVGALVV---AEDEKVVGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + RSS +T V DIMT +V
Sbjct: 56 DYTRKIALMERSSNNTLVSDIMTSKV 81
>gi|436836212|ref|YP_007321428.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
gi|384067625|emb|CCH00835.1| putative signal transduction protein with CBS domains [Fibrella
aestuarina BUZ 2]
Length = 196
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+TVY+A++ M N+GA++V+ G+ + GI +ERDY RK I+QGR+SK T + D+MT
Sbjct: 73 ETVYEALQLMAAKNIGAVLVLDGGD---LVGIFSERDYARKGILQGRASKDTLIRDVMTS 129
Query: 138 EV 139
+
Sbjct: 130 SL 131
>gi|395797325|ref|ZP_10476615.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|421139918|ref|ZP_15599943.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
gi|395338425|gb|EJF70276.1| hypothetical protein A462_18689 [Pseudomonas sp. Ag1]
gi|404508933|gb|EKA22878.1| CBS domain protein [Pseudomonas fluorescens BBc6R8]
Length = 146
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQH-NHQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I+ G SS +TK +IM V
Sbjct: 59 YARKVILHGLSSVTTKAHEIMNSPV 83
>gi|398895284|ref|ZP_10647130.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
gi|398181076|gb|EJM68648.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM55]
Length = 146
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
21]
gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
[Sphingobacterium sp. 21]
Length = 142
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ K K S + + +D+V A++ M + N+ AL+VV +Q + GI TERD
Sbjct: 3 TVKYILENKAK----SIVSVSPNDSVLGALRIMMEKNISALLVV---DQGVLLGIFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
Y RKII++GR+S +T + ++MT
Sbjct: 56 YARKIILKGRASANTAIHEVMT 77
>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYTALQLMAEKGIGALLVIEHGE---ILGILSERDYARKVILMQRTSRETLVRDIMTNA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
[Fulvimarina pelagi HTCC2506]
Length = 176
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D +V +AV M++ ++G++VVV P E+ V G++TERD +++++ QG+ K+T++ DI
Sbjct: 19 SADTSVAEAVAEMSKRDIGSVVVVGPDEK--VEGLVTERDVMKRLVNQGKDPKTTQLADI 76
Query: 135 MTEEV 139
MT E+
Sbjct: 77 MTREL 81
>gi|395497949|ref|ZP_10429528.1| hypothetical protein PPAM2_17784 [Pseudomonas sp. PAMC 25886]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK+K + + D TV++A+ M NVGAL V++ G+ V GII+ERD
Sbjct: 3 TVAQVLKSKDQ-QNQQVHTIPHDHTVFEALIVMASKNVGALPVLQDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I+ G SS +TK +IM V
Sbjct: 59 YARKVILHGLSSVATKAHEIMNSPV 83
>gi|398967935|ref|ZP_10682143.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
gi|398144279|gb|EJM33124.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM30]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKLKDQ-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VLGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSPV 83
>gi|398862863|ref|ZP_10618448.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398249805|gb|EJN35181.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + D V +A+ M + NVGAL+VV E V GII+ERD
Sbjct: 3 TVAQLLKMKDP-KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVDNDE---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V DIM V
Sbjct: 59 YARKLVLHGRSSVGTPVRDIMVSNV 83
>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
[Methylotenera mobilis JLW8]
Length = 143
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 46/60 (76%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V+DA+ + ++ +GAL+V+ E +S+ GI +ERDY R++I++GRSSK+T + ++MT +V
Sbjct: 25 VFDALVVLAEYKIGALIVL---EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVMTSKV 81
>gi|351729267|ref|ZP_08946958.1| signal-transduction protein [Acidovorax radicis N35]
Length = 145
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D +V++A+K M +GAL+ V E +S+AGI TER
Sbjct: 2 TIVAKILQSK---PDAIVHTIAPGASVFEALKLMADKGIGALLAV---EGESIAGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR+S T+V D+MT V
Sbjct: 56 DYARKIALMGRTSAVTQVRDVMTTSV 81
>gi|334131314|ref|ZP_08505079.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
gi|333443663|gb|EGK71625.1| CBS domain containing membrane protein [Methyloversatilis
universalis FAM5]
Length = 143
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G G D+TV A++ M +GA++V G ++AGI +ERDY RK+++QG+
Sbjct: 9 EGKTGPVATVEADNTVVSALRVMANRGIGAVLVTDNG---ALAGIFSERDYARKVVLQGK 65
Query: 125 SSKSTKVGDIMTEEV 139
S ST V DIMT ++
Sbjct: 66 DSSSTPVRDIMTSKL 80
>gi|354614451|ref|ZP_09032314.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
gi|353221195|gb|EHB85570.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
Length = 149
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDA-VKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T DT D V + +HNVGALVVV P + V GI++ERD
Sbjct: 3 IADLLRRKG-----STVATVTPDTGVDGLVARLAEHNVGALVVVGPAGE--VIGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G +T+VGDIMT +V
Sbjct: 56 VVRGLRERGTDLLATRVGDIMTTDV 80
>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
EPS]
gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
paradoxus EPS]
Length = 142
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+S++LK A W T+ T V+DA+ ++ + VGAL+V+ GE+ + G ++ERD
Sbjct: 4 VSELLKRHDSAA-----WRTSPHTSVFDALATLARFEVGALMVMD-GEK--LVGFLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+ +QG++SK KV +IMT +V
Sbjct: 56 YTRKVALQGKNSKEMKVSEIMTPDV 80
>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
19424]
gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
LMG 19424]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ GE + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHGE---IKGILSERDYARKVILMQRTSRETLVRDIMTTA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|424793987|ref|ZP_18220021.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796231|gb|EKU24777.1| hypothetical protein XTG29_02321 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 142
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS +T V DIM+ +V
Sbjct: 56 YARKVVLQDRSSATTPVRDIMSAKV 80
>gi|398858831|ref|ZP_10614516.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
gi|398238236|gb|EJN23969.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM79]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V DIM V
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMVAPV 83
>gi|398840754|ref|ZP_10597986.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
gi|398109766|gb|EJL99682.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Pseudomonas sp. GM102]
Length = 146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQEVHTIAPHQMVLEALMVMAAKNVGALPVLKEGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V DIM V
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMVAPV 83
>gi|399002176|ref|ZP_10704867.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
gi|398125432|gb|EJM14911.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM18]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQAVHTIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V DIM V
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMVSPV 83
>gi|440730614|ref|ZP_20910694.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
gi|440378204|gb|ELQ14832.1| signal-transduction protein with cbs domain [Xanthomonas
translucens DAR61454]
Length = 142
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMQDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS +T V DIM+ +V
Sbjct: 56 YARKVVLQDRSSATTPVRDIMSTKV 80
>gi|398938330|ref|ZP_10667733.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
gi|398165878|gb|EJM53988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM41(2012)]
Length = 146
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V++ GE V GII+ERD
Sbjct: 3 TVAQLLKLKAE-QNHEVHTIAPHQMVLEALMVMAAKNVGALPVLRNGE---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V DIM V
Sbjct: 59 YARKLVLKGRSSVGTPVEDIMVSPV 83
>gi|285018954|ref|YP_003376665.1| signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
gi|283474172|emb|CBA16673.1| putative signal-transduction protein with cbs domains [Xanthomonas
albilineans GPE PC73]
Length = 142
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V +A++ M +GA++V++ G +AGI++ERD
Sbjct: 3 TVRHVLSEKG----GEIHAIAPDAAVIEALRLMADKGIGAVLVMQDGH---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS +T V DIM+++V
Sbjct: 56 YARKVVLQERSSATTPVRDIMSDKV 80
>gi|398903957|ref|ZP_10651979.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
gi|398176386|gb|EJM64105.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM50]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + V +A+ M NVGAL V+K G+ V GII+ERD
Sbjct: 3 TVAQLLKLKAQ-QNQQVHSIAPHQMVLEALMVMAAKNVGALPVLKDGK---VVGIISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK++++GRSS T V DIM V
Sbjct: 59 YARKLVLKGRSSVGTPVSDIMVSPV 83
>gi|413964852|ref|ZP_11404078.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
gi|413927526|gb|EKS66815.1| putative signal-transduction protein with CBS domain [Burkholderia
sp. SJ98]
Length = 146
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L +K D + +V+DA+K M ++GA++V + E + GI+TERD
Sbjct: 3 TVAQVLNSK---PDQTVFTVPATASVFDAIKLMADKHIGAVIVTEGDE---IVGIMTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ R SK T V DIMT V
Sbjct: 57 YARKVVLMDRVSKHTPVRDIMTSHV 81
>gi|430807269|ref|ZP_19434384.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
gi|429500427|gb|EKZ98798.1| hypothetical protein D769_13336 [Cupriavidus sp. HMR-1]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMTSA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
Length = 241
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ I++ K K G + D TVYDA+K M + VGA +VV + + GI +ERDY
Sbjct: 97 VGKIIENKIKNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNR--MTGIFSERDY 154
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
L K+ ++G + + T V DIM+ +V
Sbjct: 155 LSKVDLRGLTPRETLVKDIMSSKV 178
>gi|422650577|ref|ZP_16713380.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLEGRSSVGTPVSEIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|94308961|ref|YP_582171.1| hypothetical protein Rmet_0016 [Cupriavidus metallidurans CH34]
gi|93352813|gb|ABF06902.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V+ EQ+ + GII+ERDY RK+I+ R+S+ T V +IMT
Sbjct: 24 TVYAALQLMAEKGIGALLVM---EQQKIVGIISERDYARKVILMQRTSRETLVREIMTTA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|407940177|ref|YP_006855818.1| signal-transduction protein [Acidovorax sp. KKS102]
gi|407897971|gb|AFU47180.1| signal-transduction protein [Acidovorax sp. KKS102]
Length = 145
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + + +V DA++ M +GAL+V E S+ GI TER
Sbjct: 2 TAVAKILQSK---PDATVHTISPAASVLDALQLMADKGIGALIVT---EGASIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR+S T+V D+MT V
Sbjct: 56 DYARKIALMGRTSAVTQVKDVMTSAV 81
>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
profundus DSM 14977]
gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
[Oceanithermus profundus DSM 14977]
Length = 146
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV++A++ M ++NVGAL VV Q + G+ +ERDY RK+I++G++SK V +IM+
Sbjct: 21 DVTVFEALEKMAEYNVGALPVVDASGQ--IVGLFSERDYARKVILRGKASKDIPVSEIMS 78
Query: 137 EEV 139
V
Sbjct: 79 THV 81
>gi|433679996|ref|ZP_20511656.1| Inosine-5'-monophosphate dehydrogenase Short=IMP dehydrogenase
[Xanthomonas translucens pv. translucens DSM 18974]
gi|430814905|emb|CCP42287.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 142
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG G D V DA++ M +GA++V+ G +AGI++ERD
Sbjct: 3 TVRQLLGDKG----GEIHAVAPDAAVVDALRLMADKGIGAVLVMHDGR---LAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS +T V DIM+ +V
Sbjct: 56 YARKVVLQDRSSATTPVRDIMSAKV 80
>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
Length = 244
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 50 GFESTTISDILKAKGKGADG----SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKS 105
GF + IS +L KG G + + +DTV A+K M + VGA++VV Q
Sbjct: 82 GFVDSKISSLLAQKGLPLKGQQAPNIIRVRENDTVLTAIKQMHTNKVGAVIVV--DSQNK 139
Query: 106 VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ GI +ERDYL + V+ SK T V D+MT V
Sbjct: 140 MTGIFSERDYLNSLAVRDLKSKDTYVKDVMTTPV 173
>gi|374366874|ref|ZP_09624947.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
gi|373101560|gb|EHP42608.1| hypothetical protein OR16_13184 [Cupriavidus basilensis OR16]
Length = 147
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIERGD---IVGILSERDYARKVILMSRTSRETFVRDIMTSA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|422298489|ref|ZP_16386089.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
gi|422589447|ref|ZP_16664109.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|407989823|gb|EKG32058.1| CBS domain-containing protein [Pseudomonas avellanae BPIC 631]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|332662391|ref|YP_004445179.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
gi|332331205|gb|AEE48306.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
1100]
Length = 145
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D +VY A++++ +HN+GAL+V+ E + GI +ERDY R+ I++G+ S+ + V
Sbjct: 16 LAVSPDTSVYSALEALEKHNIGALLVM---EGDKLVGIFSERDYARRGILKGKFSRESFV 72
Query: 132 GDIMTEEV 139
D+MT V
Sbjct: 73 KDLMTSPV 80
>gi|339324215|ref|YP_004683908.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus necator N-1]
gi|338164372|gb|AEI75427.1| inosine-5'-monophosphate dehydrogenase GuaB [Cupriavidus necator
N-1]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GAL+V++ G ++ GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGALLVIEHG---AIQGIVSERDYARKVILMQRTSRETLVRDIMTNA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|28869810|ref|NP_792429.1| hypothetical protein PSPTO_2620 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656000|ref|ZP_16718448.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ V DA++ M N+GAL VV+ G +V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 NQMVLDALRLMADKNIGALPVVENG---TVVGVVSERDYARKVVLKGRSSVGTPVSEIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|429211285|ref|ZP_19202451.1| putative CBS domain protein [Pseudomonas sp. M1]
gi|428158699|gb|EKX05246.1| putative CBS domain protein [Pseudomonas sp. M1]
Length = 145
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+ V DA++ M NVGAL VV G+ V G+++ERDY RK+I+QGRSS T V IM+
Sbjct: 23 EMVLDALRVMAVKNVGALPVVDNGQ---VVGVVSERDYARKMILQGRSSVGTPVSAIMSS 79
Query: 138 EV 139
V
Sbjct: 80 PV 81
>gi|389721991|ref|ZP_10188690.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
gi|388444905|gb|EIM00998.1| hypothetical protein UU5_02092 [Rhodanobacter sp. 115]
Length = 142
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG D + V DA+K M + VGAL+V++ GE+ + GI++ERDY RK+I+QG
Sbjct: 11 KGND--IFAIAPEAPVLDAIKHMAEQRVGALLVMR-GER--LLGIVSERDYARKVILQGH 65
Query: 125 SSKSTKVGDIMT 136
SS T V +IM+
Sbjct: 66 SSAHTAVSEIMS 77
>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
Length = 239
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F T I +IL+ K K L +D + +A++ MTQ+ VGA++V+ Q + GI
Sbjct: 80 FGDTKIKEILEKKEKR---ELLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQ--LEGIF 134
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
TERDY+ K+ +QG SS+ + V ++MT V
Sbjct: 135 TERDYVGKVALQGLSSRQSLVKEVMTRGV 163
>gi|293607877|ref|ZP_06690180.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135033|ref|YP_004995683.1| hypothetical protein BDGL_001415 [Acinetobacter calcoaceticus
PHEA-2]
gi|427425971|ref|ZP_18916043.1| CBS domain protein [Acinetobacter baumannii WC-136]
gi|292828450|gb|EFF86812.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325122478|gb|ADY82001.1| CBS domain protein [Acinetobacter calcoaceticus PHEA-2]
gi|425697303|gb|EKU66987.1| CBS domain protein [Acinetobacter baumannii WC-136]
Length = 143
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K A+ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---AEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTSKV 81
>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 142
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 55 TISDILKAKGKGADGSWLWCTTDD--TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T+S +L K K C+T + DA+K M H+VGA+VV+ G+ + GI++E
Sbjct: 3 TVSQLLMLKNKS------LCSTCSRTPLIDALKIMAVHDVGAMVVIDEGK---LVGILSE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+ + +SS VGDIMT V
Sbjct: 54 RDYARKVALANKSSTDICVGDIMTSRV 80
>gi|347822266|ref|ZP_08875700.1| signal-transduction protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 147
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL +K D + +V+DA++ M + +GAL+V E ++ GI+TER
Sbjct: 2 TLVAKILHSK---PDPTVHTIAPTASVFDALERMAEKGIGALLVT---EGDAIVGILTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI++ GR+S +T V D MT V
Sbjct: 56 DYSRKIVLMGRTSAATLVRDAMTTPV 81
>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
Length = 151
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ +L+ K + + + D TV+ A++ + +H++GA+ V+ + + GI +E
Sbjct: 2 SATVRQLLQDKNQP---PLIAVSPDCTVFQALQKLAEHDIGAVAVM---DGPRLVGIFSE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY R++I++GR S T V +MTE V
Sbjct: 56 RDYARRMILEGRQSSGTPVTAVMTERV 82
>gi|425898813|ref|ZP_18875404.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397891898|gb|EJL08376.1| CBS domain protein [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V IM+ V
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMSSPV 83
>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583462|ref|ZP_16658586.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL VV E + G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGALPVV---EGNVMVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|114331513|ref|YP_747735.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114308527|gb|ABI59770.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DA++ MT +N+GAL+VVK K + GI+TERD+ RK + RS K +V +IMT
Sbjct: 22 DSVSDAMQKMTTNNIGALLVVK---DKKLIGILTERDFSRKYCLLNRSVKDMRVEEIMTR 78
Query: 138 EV 139
+V
Sbjct: 79 QV 80
>gi|255533567|ref|YP_003093939.1| hypothetical protein Phep_3686 [Pedobacter heparinus DSM 2366]
gi|255346551|gb|ACU05877.1| CBS domain containing protein [Pedobacter heparinus DSM 2366]
Length = 142
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + +V DA+K M + N+ AL+V+ + K + GI TERDY RKII+ G+SS T + ++
Sbjct: 19 TENSSVLDALKVMMEKNISALMVL---DGKRLVGIFTERDYARKIILHGKSSAETAIKEV 75
Query: 135 MTEE 138
MT +
Sbjct: 76 MTAQ 79
>gi|389680723|ref|ZP_10172072.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|399009930|ref|ZP_10712327.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
gi|388555310|gb|EIM18554.1| CBS domain protein [Pseudomonas chlororaphis O6]
gi|398109029|gb|EJL98973.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas sp. GM17]
Length = 146
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ GE V G+I+ERD
Sbjct: 3 SVAEVLKLKAK-HNQQVHTIAPHQMVLEALMLMAEKNVGALPVMQNGE---VVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V IM+ V
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMSSPV 83
>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
Length = 142
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI +LK K S ++ T V DA+ M + N+ AL++++ G+ + GI TER
Sbjct: 3 TIKQLLKTKS-----SQIFSVPASTSVLDALHVMMEKNISALLIMESGQ---LLGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY RKII+QG+SS T + ++MT
Sbjct: 55 DYARKIILQGKSSADTFLAEVMT 77
>gi|398866658|ref|ZP_10622139.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
gi|398239725|gb|EJN25429.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Pseudomonas sp. GM78]
Length = 146
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +AV+ M + NVGAL V++ G+ V G+I+ERDY RK+++ GRSS T V IM+
Sbjct: 24 DAMVLEAVQKMAEKNVGALPVIEKGQ---VVGVISERDYARKVVLLGRSSVGTPVRAIMS 80
Query: 137 EEV 139
V
Sbjct: 81 SPV 83
>gi|421746846|ref|ZP_16184610.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
gi|409774585|gb|EKN56187.1| hypothetical protein B551_09076 [Cupriavidus necator HPC(L)]
Length = 145
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + ++GAL+V++ G+ + GI++ERDY RK+I+ R+S+ T V DIMT
Sbjct: 24 TVYAALQLMAEKSIGALLVMEHGK---IVGILSERDYARKVILMQRTSRETFVRDIMTTA 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|239503946|ref|ZP_04663256.1| CBS domain pair family protein [Acinetobacter baumannii AB900]
gi|421677002|ref|ZP_16116896.1| CBS domain protein [Acinetobacter baumannii OIFC111]
gi|410393659|gb|EKP46011.1| CBS domain protein [Acinetobacter baumannii OIFC111]
Length = 143
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|169795727|ref|YP_001713520.1| hypothetical protein ABAYE1626 [Acinetobacter baumannii AYE]
gi|184158370|ref|YP_001846709.1| CBS domain-containing protein [Acinetobacter baumannii ACICU]
gi|213157580|ref|YP_002319625.1| hypothetical protein AB57_2273 [Acinetobacter baumannii AB0057]
gi|215483212|ref|YP_002325419.1| hypothetical protein [Acinetobacter baumannii AB307-0294]
gi|260554789|ref|ZP_05827010.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301347585|ref|ZP_07228326.1| CBS domain pair family protein [Acinetobacter baumannii AB056]
gi|301513137|ref|ZP_07238374.1| CBS domain pair family protein [Acinetobacter baumannii AB058]
gi|301596680|ref|ZP_07241688.1| CBS domain pair family protein [Acinetobacter baumannii AB059]
gi|332850270|ref|ZP_08432618.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332871229|ref|ZP_08439798.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332873862|ref|ZP_08441802.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|384132476|ref|YP_005515088.1| hypothetical protein [Acinetobacter baumannii 1656-2]
gi|384143477|ref|YP_005526187.1| hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385237804|ref|YP_005799143.1| hypothetical protein ABTW07_2260 [Acinetobacter baumannii
TCDC-AB0715]
gi|387123678|ref|YP_006289560.1| putative signal transduction protein [Acinetobacter baumannii
MDR-TJ]
gi|403675738|ref|ZP_10937877.1| hypothetical protein ANCT1_14062 [Acinetobacter sp. NCTC 10304]
gi|407933074|ref|YP_006848717.1| hypothetical protein M3Q_2396 [Acinetobacter baumannii TYTH-1]
gi|416151450|ref|ZP_11603652.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|417550058|ref|ZP_12201138.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|417553271|ref|ZP_12204341.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|417560669|ref|ZP_12211548.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|417567022|ref|ZP_12217894.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|417568545|ref|ZP_12219408.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|417574386|ref|ZP_12225240.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|417578300|ref|ZP_12229137.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|417871712|ref|ZP_12516640.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|417873690|ref|ZP_12518556.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|417878029|ref|ZP_12522666.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|417883458|ref|ZP_12527701.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|421200616|ref|ZP_15657776.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|421204154|ref|ZP_15661283.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|421457509|ref|ZP_15906846.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|421534437|ref|ZP_15980710.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|421621648|ref|ZP_16062563.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|421626779|ref|ZP_16067606.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|421629982|ref|ZP_16070697.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|421633694|ref|ZP_16074323.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|421643738|ref|ZP_16084230.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|421645868|ref|ZP_16086323.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|421650501|ref|ZP_16090877.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|421654013|ref|ZP_16094344.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|421658597|ref|ZP_16098830.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|421664494|ref|ZP_16104634.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|421675515|ref|ZP_16115436.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|421687808|ref|ZP_16127517.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|421691456|ref|ZP_16131115.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|421695902|ref|ZP_16135498.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|421698648|ref|ZP_16138189.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|421703849|ref|ZP_16143305.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|421707632|ref|ZP_16147023.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|421789595|ref|ZP_16225847.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|421794587|ref|ZP_16230685.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|421795557|ref|ZP_16231639.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|421801156|ref|ZP_16237118.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|421804535|ref|ZP_16240445.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|424052104|ref|ZP_17789636.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|424059666|ref|ZP_17797157.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|424063606|ref|ZP_17801091.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|425748682|ref|ZP_18866666.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425751818|ref|ZP_18869759.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|445405145|ref|ZP_21431122.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|445442922|ref|ZP_21442492.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|445461247|ref|ZP_21448660.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|445471252|ref|ZP_21452005.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|445475956|ref|ZP_21453589.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|445492523|ref|ZP_21460470.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|169148654|emb|CAM86520.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|183209964|gb|ACC57362.1| CBS domain protein [Acinetobacter baumannii ACICU]
gi|193077532|gb|ABO12362.2| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
gi|213056740|gb|ACJ41642.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
gi|213985702|gb|ACJ56001.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
gi|260411331|gb|EEX04628.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322508696|gb|ADX04150.1| CBS domain-containing protein [Acinetobacter baumannii 1656-2]
gi|323518303|gb|ADX92684.1| CBS domain-containing protein [Acinetobacter baumannii TCDC-AB0715]
gi|332730845|gb|EGJ62154.1| CBS domain protein [Acinetobacter baumannii 6013150]
gi|332731638|gb|EGJ62922.1| CBS domain protein [Acinetobacter baumannii 6013113]
gi|332737848|gb|EGJ68735.1| CBS domain protein [Acinetobacter baumannii 6014059]
gi|333363691|gb|EGK45705.1| CBS domain-containing protein [Acinetobacter baumannii AB210]
gi|342224689|gb|EGT89712.1| hypothetical protein ABNIH1_16486 [Acinetobacter baumannii ABNIH1]
gi|342230688|gb|EGT95516.1| hypothetical protein ABNIH2_06672 [Acinetobacter baumannii ABNIH2]
gi|342233896|gb|EGT98596.1| hypothetical protein ABNIH3_08338 [Acinetobacter baumannii ABNIH3]
gi|342235794|gb|EGU00359.1| hypothetical protein ABNIH4_13531 [Acinetobacter baumannii ABNIH4]
gi|347593970|gb|AEP06691.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06]
gi|385878170|gb|AFI95265.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Acinetobacter baumannii MDR-TJ]
gi|395523251|gb|EJG11340.1| CBS domain protein [Acinetobacter baumannii OIFC137]
gi|395552694|gb|EJG18702.1| CBS domain protein [Acinetobacter baumannii OIFC143]
gi|395554840|gb|EJG20842.1| CBS domain protein [Acinetobacter baumannii OIFC189]
gi|395564217|gb|EJG25869.1| CBS domain protein [Acinetobacter baumannii OIFC109]
gi|395568997|gb|EJG29667.1| CBS domain protein [Acinetobacter baumannii Naval-17]
gi|398326314|gb|EJN42463.1| cbs domain-containing protein [Acinetobacter baumannii AC12]
gi|400207233|gb|EJO38204.1| CBS domain protein [Acinetobacter baumannii IS-123]
gi|400209954|gb|EJO40924.1| CBS domain protein [Acinetobacter baumannii Canada BC-5]
gi|400388026|gb|EJP51099.1| CBS domain protein [Acinetobacter baumannii Naval-18]
gi|400393530|gb|EJP60576.1| CBS domain protein [Acinetobacter baumannii Naval-81]
gi|404562065|gb|EKA67289.1| CBS domain protein [Acinetobacter baumannii IS-116]
gi|404563513|gb|EKA68721.1| CBS domain protein [Acinetobacter baumannii IS-143]
gi|404563885|gb|EKA69079.1| CBS domain protein [Acinetobacter baumannii WC-692]
gi|404572438|gb|EKA77481.1| CBS domain protein [Acinetobacter baumannii IS-58]
gi|404664420|gb|EKB32407.1| hypothetical protein W9G_00793 [Acinetobacter baumannii Ab11111]
gi|404670404|gb|EKB38296.1| hypothetical protein W9K_00780 [Acinetobacter baumannii Ab33333]
gi|404674198|gb|EKB41958.1| hypothetical protein W9M_00889 [Acinetobacter baumannii Ab44444]
gi|407191399|gb|EKE62600.1| hypothetical protein B825_11216 [Acinetobacter baumannii ZWS1122]
gi|407191738|gb|EKE62928.1| hypothetical protein B837_11077 [Acinetobacter baumannii ZWS1219]
gi|407901655|gb|AFU38486.1| CBS domain-containing protein [Acinetobacter baumannii TYTH-1]
gi|408507399|gb|EKK09094.1| CBS domain protein [Acinetobacter baumannii IS-235]
gi|408510136|gb|EKK11799.1| CBS domain protein [Acinetobacter baumannii OIFC0162]
gi|408511863|gb|EKK13510.1| CBS domain protein [Acinetobacter baumannii Naval-72]
gi|408517861|gb|EKK19396.1| CBS domain protein [Acinetobacter baumannii IS-251]
gi|408694766|gb|EKL40328.1| CBS domain protein [Acinetobacter baumannii OIFC098]
gi|408697245|gb|EKL42760.1| CBS domain protein [Acinetobacter baumannii OIFC074]
gi|408699331|gb|EKL44811.1| CBS domain protein [Acinetobacter baumannii OIFC180]
gi|408706224|gb|EKL51548.1| CBS domain protein [Acinetobacter baumannii Naval-13]
gi|408710031|gb|EKL55270.1| CBS domain protein [Acinetobacter baumannii Naval-83]
gi|408712791|gb|EKL57974.1| CBS domain protein [Acinetobacter baumannii OIFC110]
gi|409987642|gb|EKO43822.1| CBS domain pair family protein [Acinetobacter baumannii AC30]
gi|410382446|gb|EKP35000.1| CBS domain protein [Acinetobacter baumannii OIFC065]
gi|410394205|gb|EKP46543.1| CBS domain protein [Acinetobacter baumannii Naval-2]
gi|410398044|gb|EKP50271.1| CBS domain protein [Acinetobacter baumannii Naval-82]
gi|410401507|gb|EKP53647.1| CBS domain protein [Acinetobacter baumannii Naval-21]
gi|410405810|gb|EKP57844.1| CBS domain protein [Acinetobacter baumannii Canada BC1]
gi|410411906|gb|EKP63775.1| CBS domain protein [Acinetobacter baumannii WC-A-694]
gi|425490727|gb|EKU57022.1| CBS domain protein [Acinetobacter baumannii WC-348]
gi|425499574|gb|EKU65606.1| CBS domain protein [Acinetobacter baumannii Naval-113]
gi|444763044|gb|ELW87388.1| CBS domain protein [Acinetobacter baumannii WC-A-92]
gi|444763762|gb|ELW88098.1| CBS domain protein [Acinetobacter baumannii AA-014]
gi|444771741|gb|ELW95866.1| CBS domain protein [Acinetobacter baumannii OIFC047]
gi|444771992|gb|ELW96116.1| CBS domain protein [Acinetobacter baumannii OIFC338]
gi|444778500|gb|ELX02512.1| CBS domain protein [Acinetobacter baumannii Naval-78]
gi|444781895|gb|ELX05806.1| CBS domain protein [Acinetobacter baumannii Naval-57]
gi|452952329|gb|EME57763.1| hypothetical protein G347_08216 [Acinetobacter baumannii MSP4-16]
Length = 143
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|389793525|ref|ZP_10196688.1| signal transduction protein [Rhodanobacter fulvus Jip2]
gi|388433739|gb|EIL90699.1| signal transduction protein [Rhodanobacter fulvus Jip2]
Length = 142
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG D V +A+K M ++ +GAL+V++ ++ G+++ERDY RK+++Q
Sbjct: 9 EGKG--NKIFSIEPDVPVLEAIKRMAEYRIGALMVMR---GSALVGVMSERDYARKVLLQ 63
Query: 123 GRSSKSTKVGDIMT 136
GRSS T V DIM+
Sbjct: 64 GRSSSQTAVSDIMS 77
>gi|419954602|ref|ZP_14470738.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
gi|387968466|gb|EIK52755.1| hypothetical protein YO5_04984 [Pseudomonas stutzeri TS44]
Length = 145
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V++A+K M Q NVGAL V + + GI++ERDY RK+++ GRSS T+V IMT
Sbjct: 22 EDSVFEALKVMEQKNVGALPVADASGR--LVGIVSERDYARKMVLLGRSSFVTQVSAIMT 79
Query: 137 EEV 139
V
Sbjct: 80 RSV 82
>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
Length = 228
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
++ T + I++ K + G + ++TVY+A+K M VGA +VV + + GI
Sbjct: 79 YKDTQVGAIIEEKIRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNR--MCGIF 136
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ERDYL K+ ++G S K T V D+ T+++
Sbjct: 137 SERDYLSKVDLRGLSPKETLVKDVCTKQI 165
>gi|423095419|ref|ZP_17083215.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
gi|397887894|gb|EJL04377.1| CBS domain protein [Pseudomonas fluorescens Q2-87]
Length = 146
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK+++QGRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIENGQ---VVGVFSERDYARKMVLQGRSSVGTPVRTIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|417547111|ref|ZP_12198197.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|421667212|ref|ZP_16107287.1| CBS domain protein [Acinetobacter baumannii OIFC087]
gi|421671820|ref|ZP_16111788.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|400384999|gb|EJP43677.1| CBS domain protein [Acinetobacter baumannii OIFC032]
gi|410381086|gb|EKP33659.1| CBS domain protein [Acinetobacter baumannii OIFC099]
gi|410385558|gb|EKP38049.1| CBS domain protein [Acinetobacter baumannii OIFC087]
Length = 143
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VIGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|399522669|ref|ZP_10763332.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109533|emb|CCH39893.1| CBS domain protein [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 146
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T++++L+ K ++L+ DD++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TVAELLRTKSN----TFLYSVDADDSLLDGLRIMAEKGVGALVVLSGGR---MVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY+RK + RS KV IMT EV
Sbjct: 56 DYVRKAALADRSMLDAKVNTIMTREV 81
>gi|374850834|dbj|BAL53812.1| signal transduction protein [uncultured planctomycete]
Length = 151
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ++L+ KG G L + TV A + M QH++G LVV +++ + GI++ERD
Sbjct: 4 LRELLQLKG----GQVLTISPSQTVLAAAELMNQHHIGCLVVC---DERGICGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
L++++ R ST VG++MT +V
Sbjct: 57 LQRVVAARRDPSSTTVGEVMTTQV 80
>gi|298714864|emb|CBJ25763.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 210
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 38 FESVSSARMEEHGFESTTISDILKAKGKGADGSWL----WCTTDDTVYDAVKSMTQHNVG 93
S+S + +G +TT+ + AK + + + TVY+AV+ +N+G
Sbjct: 33 LSSMSDPKPRNYGEVATTVENRSSAKDALQKSCYFKIDFGISEEATVYEAVQRFAAYNIG 92
Query: 94 ALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
AL V + K V GI++ERDY+ K+ + G++SKST V +I T
Sbjct: 93 ALAVT--NDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIAT 133
>gi|374372824|ref|ZP_09630485.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
gi|373234900|gb|EHP54692.1| putative signal transduction protein with CBS domains [Niabella
soli DSM 19437]
Length = 144
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S+IL KG A + TVY A++ M + N+G+LVV K GE + GI+TERDY
Sbjct: 4 VSNILGRKGHDA----ISIPPATTVYRALELMAEKNIGSLVV-KEGE--NFLGIMTERDY 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RK+I++G+ S T V +IM+ ++
Sbjct: 57 SRKVILKGKHSSDTTVEEIMSTDL 80
>gi|299769864|ref|YP_003731890.1| hypothetical protein AOLE_08130 [Acinetobacter oleivorans DR1]
gi|298699952|gb|ADI90517.1| CBS domain pair family protein [Acinetobacter oleivorans DR1]
Length = 143
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTSKV 81
>gi|392967743|ref|ZP_10333159.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
gi|387842105|emb|CCH55213.1| putative signal transduction protein with CBS domains [Fibrisoma
limi BUZ 3]
Length = 145
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GK + + T++ TV +A++ M N+GA++VV G+ + GI +ERDY RK I++
Sbjct: 8 QGKAVNALY-TVTSNQTVLEALELMADKNIGAVLVVDDGQ---LTGIFSERDYARKGILK 63
Query: 123 GRSSKSTKVGDIMTEEV 139
GR S T + ++MT V
Sbjct: 64 GRHSADTSISEVMTPHV 80
>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425740420|ref|ZP_18858592.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|445433303|ref|ZP_21439661.1| CBS domain protein [Acinetobacter baumannii OIFC021]
gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
gi|425494813|gb|EKU61007.1| CBS domain protein [Acinetobacter baumannii WC-487]
gi|444757695|gb|ELW82212.1| CBS domain protein [Acinetobacter baumannii OIFC021]
Length = 143
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|443473996|ref|ZP_21064017.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
gi|442904931|gb|ELS29846.1| CBS domain containing protein [Pseudomonas pseudoalcaligenes KF707]
Length = 146
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +L+AK + + D + DA++ + + N+GAL V + G + GI++ERD
Sbjct: 3 TVAQMLRAKPRQQVHT---IEADVPMLDALRLLAEQNIGALPVTEGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R+ ++QGRSS +T V + MTE V
Sbjct: 57 YARRGVLQGRSSVATPVREFMTEPV 81
>gi|73539746|ref|YP_294266.1| hypothetical protein Reut_A0040 [Ralstonia eutropha JMP134]
gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
Length = 146
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVY A++ M + +GA++V++ G+ + GI++ERDY RK+I+ RSS+ T V DIMT
Sbjct: 24 TVYAALQLMAEKGIGAVLVMEHGK---IVGILSERDYARKVILMQRSSRDTLVRDIMTSS 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
Length = 142
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+IS+I++ + + T D TV DA + + +H +GAL V+ G+ + GI++ERD
Sbjct: 5 SISEIIRNR------TLRHATPDMTVRDACRILDEHAIGALPVLDGGK---LLGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
+R++IV+ R +TKV ++MT E
Sbjct: 56 VIRRVIVRDRDPSATKVSEVMTPE 79
>gi|421808270|ref|ZP_16244121.1| CBS domain protein [Acinetobacter baumannii OIFC035]
gi|410415850|gb|EKP67631.1| CBS domain protein [Acinetobacter baumannii OIFC035]
Length = 143
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|375144377|ref|YP_005006818.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
gi|361058423|gb|AEV97414.1| putative signal transduction protein with CBS domains [Niastella
koreensis GR20-10]
Length = 145
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+L KG + T TV +A+ M N+G+++V++ G GI+TERDY
Sbjct: 5 VADVLLRKG----SNITTVTPATTVLEALHIMADQNIGSVMVLEDGHY---LGIVTERDY 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RK++++G+SS TKV +IM+ ++
Sbjct: 58 SRKVVLKGKSSTDTKVSEIMSNDL 81
>gi|254467032|ref|ZP_05080443.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206687940|gb|EDZ48422.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 144
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AKG G+ + V DA+K M + +VG+++V+ G+ +AGI TER
Sbjct: 3 TVQQILDAKG----GTLHTLPPEAMVVDALKLMAEEDVGSVLVMSGGK---LAGIFTERH 55
Query: 115 YLRKIIVQGRSSKSTKVGDIM 135
Y RK+ + G++S +T + D+M
Sbjct: 56 YTRKVFLAGKTSPTTPLADVM 76
>gi|262370497|ref|ZP_06063823.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
gi|262314839|gb|EEY95880.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
Length = 143
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV++A+ M +GALVV ++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVFEAISLMADKGIGALVVT---HEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY+RK+++ R+SK T V +IMT
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT 78
>gi|348676171|gb|EGZ15989.1| hypothetical protein PHYSODRAFT_286413 [Phytophthora sojae]
Length = 184
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
TV++A+ M N+G L V GE G++TERDYL+K+ +QG ++K+T VG IMT
Sbjct: 53 TVFEAITRMAGINLGCLAV--SGEGGKFVGVVTERDYLKKVELQGLTAKNTLVGQIMTH 109
>gi|169633658|ref|YP_001707394.1| hypothetical protein ABSDF2087 [Acinetobacter baumannii SDF]
gi|169152450|emb|CAP01415.1| conserved hypothetical protein [Acinetobacter baumannii]
Length = 143
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + ++K K + A + + TV +A+ M + +GALVV + GEQ V GI++ER
Sbjct: 2 TIAAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVVAE-GEQ--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTAKV 81
>gi|406039484|ref|ZP_11046839.1| hypothetical protein AursD1_06641 [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 143
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +++ K A+ + + D TV +A+ M + +GALVV + E V GI++ER
Sbjct: 2 TNVAQVIQDK---AEQAIYTVSPDATVLEAISIMAEKGIGALVVTQDNE---VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS T V +IMT +V
Sbjct: 56 DYTRKVALMERSSYDTTVSEIMTAKV 81
>gi|50085401|ref|YP_046911.1| hypothetical protein ACIAD2305 [Acinetobacter sp. ADP1]
gi|49531377|emb|CAG69089.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D +V +A+ M +GA+VVV E++SV GI++ERDY RK+ + RSS ST V +I
Sbjct: 20 SPDASVLEAISLMADKGIGAIVVV---EKESVVGILSERDYTRKVELMDRSSNSTVVSEI 76
Query: 135 MTEEV 139
MT +V
Sbjct: 77 MTPKV 81
>gi|359800655|ref|ZP_09303194.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
gi|359361356|gb|EHK63114.1| hypothetical protein KYC_26852 [Achromobacter arsenitoxydans SY8]
Length = 122
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+++AVK+M + ++GA+VVV+ V G++TERDY RKI++Q RSS++TKV +IMTE V
Sbjct: 1 MFEAVKTMAERSIGAVVVVE---GDVVLGMLTERDYARKIVLQDRSSRTTKVREIMTESV 57
>gi|350561255|ref|ZP_08930094.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781362|gb|EGZ35670.1| CBS domain containing membrane protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 142
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+V++A++ M H VGAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRLMADHEVGALPVLENG---RLVGLISERDYARKVILMDRSSRNTPVREIM 76
>gi|255319571|ref|ZP_05360784.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262379869|ref|ZP_06073025.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|421465283|ref|ZP_15913971.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
gi|255303369|gb|EET82573.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
radioresistens SK82]
gi|262299326|gb|EEY87239.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
gi|400204545|gb|EJO35529.1| CBS domain protein [Acinetobacter radioresistens WC-A-157]
Length = 143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL+V +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIVT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS +T V +IMT +V
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMTNKV 81
>gi|358638453|dbj|BAL25750.1| hypothetical protein AZKH_3461 [Azoarcus sp. KH32C]
Length = 151
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG A + V DA+ M + ++G+++V+ E + + GI TE
Sbjct: 6 TVTVRQILEQKGTAAHAVAPTVS----VLDALTLMAKQDIGSVLVI---ENERLVGIFTE 58
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RDY RK+ ++G +S+ VGD+MT V
Sbjct: 59 RDYARKLALKGLTSRDATVGDLMTPNV 85
>gi|262279324|ref|ZP_06057109.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|424745055|ref|ZP_18173328.1| CBS domain protein [Acinetobacter baumannii WC-141]
gi|262259675|gb|EEY78408.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
gi|422942373|gb|EKU37427.1| CBS domain protein [Acinetobacter baumannii WC-141]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K ++ + + TV +A+K M +GALVV GE+ V GI++ER
Sbjct: 2 TIVAQVIKNK---SEQDIFTISPEATVLEAIKIMADKGIGALVVA-DGEK--VVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS ST V +IMT +V
Sbjct: 56 DYTRKVTLMERSSYSTTVAEIMTSKV 81
>gi|330809809|ref|YP_004354271.1| hypothetical protein PSEBR_a2964 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378950736|ref|YP_005208224.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|423697458|ref|ZP_17671948.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377917|gb|AEA69267.1| Conserved hypothetical protein, CBS domain-containing protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359760750|gb|AEV62829.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
F113]
gi|388003991|gb|EIK65318.1| CBS domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 146
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A++ M + NVGAL V++ G+ V G+ +ERDY RK++++GRSS T V IM+
Sbjct: 24 EQTVLEALQIMAEKNVGALPVIEDGQ---VVGVFSERDYARKMVLKGRSSVGTTVRTIMS 80
Query: 137 EEV 139
V
Sbjct: 81 APV 83
>gi|380513462|ref|ZP_09856869.1| signal-transduction protein with cbs domains [Xanthomonas sacchari
NCPPB 4393]
Length = 142
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L KG D V +A++ M +GA++V++ G+ ++GI++ERD
Sbjct: 3 TVRQVLNEKGN----EIHAVGPDTAVIEALRLMAAKGIGAVLVMQDGQ---LSGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++Q RSS +T V DIM+ +V
Sbjct: 56 YARKVVLQDRSSATTPVRDIMSSKV 80
>gi|381196126|ref|ZP_09903468.1| hypothetical protein AlwoW_02540 [Acinetobacter lwoffii WJ10621]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ +LK K A + + TV +A+ M +GALVV +++ V GI++ER
Sbjct: 2 TNVAQVLKDKVHQA---IYTISPEATVLEAISLMADKGIGALVVT---QEERVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
DY+RK+++ R+SK T V +IMT
Sbjct: 56 DYMRKVMLMERTSKQTTVNEIMT 78
>gi|430760638|ref|YP_007216495.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010262|gb|AGA33014.1| CBS domain containing membrane protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 142
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V++A++ M H +GAL V++ G + G+I+ERDY RK+I+ RSS++T V +IM
Sbjct: 23 SVFEALRMMADHEIGALPVLENGR---LVGLISERDYARKVILLDRSSRNTPVREIMMAR 79
Query: 139 V 139
V
Sbjct: 80 V 80
>gi|421857085|ref|ZP_16289440.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403187424|dbj|GAB75641.1| hypothetical protein ACRAD_32_00140 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 143
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L K + A + + TV +A+ M +GAL++ +++ V GI++ER
Sbjct: 2 TTVSQVLHNKTEKA---IFTISPEATVLEAISLMANKGIGALIIT---DEQRVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + RSS +T V +IMT +V
Sbjct: 56 DYTRKVALMERSSYNTTVSEIMTNKV 81
>gi|70729700|ref|YP_259439.1| hypothetical protein PFL_2332 [Pseudomonas protegens Pf-5]
gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas protegens Pf-5]
Length = 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++++LK K K + V +A+ M + NVGAL V++ G V G+I+ERD
Sbjct: 3 SVAELLKLKAK-HNQQVHTIAPHQMVLEALMVMAEKNVGALPVLENG---VVVGVISERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+++ GRSS T V IM+ V
Sbjct: 59 YARKLVLHGRSSVGTPVSAIMSSPV 83
>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
Length = 135
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 7 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 59
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+ RK + + K T+V +IMT +V
Sbjct: 60 FSRKSYLLDKPVKDTQVKEIMTRQV 84
>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 153
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA 107
E E ISD++ + + C DDTV DA + M ++++G++VVV ++ ++
Sbjct: 6 EIAPEELKISDVMTP-------NVITCKPDDTVVDAARKMAKYSIGSVVVVD--DKGTIL 56
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMT 136
GI+TE D +R+++ +G T V D+MT
Sbjct: 57 GILTEGDIVRRVVARGLDPSRTLVRDVMT 85
>gi|395006914|ref|ZP_10390707.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394315102|gb|EJE51929.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 145
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ IL++K D + D+V A++ M +GALVV E ++ GI TER
Sbjct: 2 TVVAKILQSK---PDATVHTIRPTDSVLSALQLMADKGIGALVVT---EGDAIVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI + GR+S +T D+MT V
Sbjct: 56 DYARKIALLGRTSAATLARDVMTTAV 81
>gi|295680850|ref|YP_003609424.1| hypothetical protein BC1002_6046 [Burkholderia sp. CCGE1002]
gi|295440745|gb|ADG19913.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A++ M +V ++V+ + ++ G++++RDY RK+ V GR++ ST+VGDIMT
Sbjct: 25 DDTVLSALQLMADKDVTTVLVL---QSSNLVGVLSQRDYARKVDVLGRNAASTRVGDIMT 81
Query: 137 EEV 139
+V
Sbjct: 82 TQV 84
>gi|386719569|ref|YP_006185895.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
gi|384079131|emb|CCH13727.1| FOG: CBS domain [Stenotrophomonas maltophilia D457]
Length = 136
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 14 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 70
Query: 137 EEV 139
+V
Sbjct: 71 AQV 73
>gi|344208487|ref|YP_004793628.1| signal transduction protein with CBS domains [Stenotrophomonas
maltophilia JV3]
gi|343779849|gb|AEM52402.1| putative signal transduction protein with CBS domains
[Stenotrophomonas maltophilia JV3]
Length = 143
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 AQV 80
>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
R551-3]
gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
[Stenotrophomonas maltophilia R551-3]
Length = 143
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 AQV 80
>gi|408822883|ref|ZP_11207773.1| putative signal transduction protein [Pseudomonas geniculata N1]
Length = 143
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T+V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTEVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 AKV 80
>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
Length = 143
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGARLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 AQV 80
>gi|424669809|ref|ZP_18106834.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
gi|401071880|gb|EJP80391.1| hypothetical protein A1OC_03424 [Stenotrophomonas maltophilia
Ab55555]
Length = 143
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 TQV 80
>gi|456734307|gb|EMF59123.1| Inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
maltophilia EPM1]
Length = 143
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT
Sbjct: 21 DAAVIDAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMT 77
Query: 137 EEV 139
+V
Sbjct: 78 TQV 80
>gi|30250323|ref|NP_842393.1| hypothetical protein NE2398 [Nitrosomonas europaea ATCC 19718]
gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
Length = 146
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ +L+ KG + + DD+V++A++ M N+GAL+V+K + + GI+TERD
Sbjct: 3 TVKHLLQEKGH----TVVAIGPDDSVFNAMQKMAADNIGALLVMK---DEKLVGILTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+ RK + + K T+V +IMT +V
Sbjct: 56 FSRKSYLLDKPVKDTQVKEIMTRQV 80
>gi|296109539|ref|YP_003616488.1| signal transduction protein with CBS domains [methanocaldococcus
infernus ME]
gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
[Methanocaldococcus infernus ME]
Length = 184
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTVYDA M + ++GA+VVV E K GI+TERD L+K++ + K V ++MT+
Sbjct: 24 DTVYDAANIMCEKDIGAVVVV---ENKKPVGILTERDILKKVVAKNLKPKEVLVEEVMTK 80
Query: 138 EV 139
+
Sbjct: 81 NI 82
>gi|389706323|ref|ZP_10186413.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
gi|388610800|gb|EIM39915.1| hypothetical protein HADU_05430 [Acinetobacter sp. HA]
Length = 143
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M ++GA+VVV E+ V GI++ERDY RKI++ R+S T V IMT
Sbjct: 24 TVLEAITLMADKDIGAIVVV---EEDKVVGILSERDYTRKIVLMERTSFDTTVSQIMTSN 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|196250717|ref|ZP_03149405.1| CBS domain containing protein [Geobacillus sp. G11MC16]
gi|196209796|gb|EDY04567.1| CBS domain containing protein [Geobacillus sp. G11MC16]
Length = 148
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D
Sbjct: 20 VSPNQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSD 76
Query: 134 IMTEEV 139
+MT +V
Sbjct: 77 VMTNQV 82
>gi|138894186|ref|YP_001124639.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|134265699|gb|ABO65894.1| Inosine-5-monophosphate dehydrogenase related protein [Geobacillus
thermodenitrificans NG80-2]
Length = 136
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV D
Sbjct: 8 VSPNQTVQEAAQIMSQKNIGALPVVESGQ---VKGMITDRDITLRVTSQGKDPAAVKVSD 64
Query: 134 IMTEEV 139
+MT +V
Sbjct: 65 VMTNQV 70
>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
Length = 143
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
L D V DA+ M ++ +GAL+V+ ++ + GII+ERDY R+I+++G+SSK
Sbjct: 14 NDILSVEPDRPVIDALIIMAEYKIGALLVM---QKNKLLGIISERDYAREIVLKGKSSKE 70
Query: 129 TKVGDIMTEEV 139
+ ++MT+ V
Sbjct: 71 CLIEEVMTKNV 81
>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
terrae PB90-1]
Length = 147
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+T IS +L KG ++ TV DAV M +H +G++VV+ E S GI TE
Sbjct: 2 NTPISALLDRKGSVV----FSVPSNVTVCDAVNEMNRHRIGSIVVL---ENSSPIGIFTE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RD LR+++ +G K T V +MT
Sbjct: 55 RDVLRRVVGEGVDPKRTPVNQVMT 78
>gi|451982233|ref|ZP_21930554.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
gi|451760526|emb|CCQ91836.1| conserved hypothetical protein, contains CBS-domains [Nitrospina
gracilis 3/211]
Length = 139
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+T+ DA + M + VG+LVVV K GI+TE D+ RK++ +G K+ KVGDIMT
Sbjct: 28 NTIKDAAEFMHEKQVGSLVVV---NGKKPVGIVTETDFARKVVAKGLDPKTAKVGDIMT 83
>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera versatilis 301]
gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
[Methylotenera versatilis 301]
Length = 143
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V+DA+ + ++ +GALVV+ + + G+ +ERDY R+II++G+SSK+T + ++M+ V
Sbjct: 25 VFDALVVLAEYKIGALVVL---DGDKLVGVFSERDYAREIILKGKSSKTTPISEVMSSNV 81
>gi|332662181|ref|YP_004444969.1| signal transduction protein with CBS domains [Haliscomenobacter
hydrossis DSM 1100]
gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
[Haliscomenobacter hydrossis DSM 1100]
Length = 144
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+ M+Q +GA++V+ ++ + GI +ERDY RK I+ GR +KST V ++MT
Sbjct: 22 DHMVIDALALMSQQGIGAVLVM---DEDQLIGIFSERDYARKGIIVGRKAKSTPVTEVMT 78
Query: 137 EEV 139
V
Sbjct: 79 ANV 81
>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
Length = 145
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G L T+D V DA + M++ +GA+V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVLTLTSDANVADAARIMSEKRIGAVVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ QG S + V D+MT+++
Sbjct: 59 VRELGKQGPSCMALVVSDMMTKKL 82
>gi|375096369|ref|ZP_09742634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374657102|gb|EHR51935.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 8/82 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L+ KG S + T T V + + + +HNVGALVVV +VAGI++ERD
Sbjct: 3 IADLLRRKG-----SMVATVTPRTRVSELLARLAEHNVGALVVVDGA--GAVAGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
+R++ G S +VGDIMT
Sbjct: 56 VVRRLHQHGPDLLSREVGDIMT 77
>gi|345870085|ref|ZP_08822040.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
gi|343922472|gb|EGV33174.1| putative signal transduction protein with CBS domains
[Thiorhodococcus drewsii AZ1]
Length = 142
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 69 GSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK 127
GS LW D +VY+A+ M + +GA+VV+ + G+++ERDY R + RS K
Sbjct: 12 GSRLWSIAPDASVYEALALMAERRIGAVVVI---DDTGPIGLLSERDYARDAVHNTRSPK 68
Query: 128 STKVGDIMTEEV 139
T V DIMT V
Sbjct: 69 ETLVRDIMTRHV 80
>gi|374857450|dbj|BAL60302.1| inosine monophosphate dehydrogenase [uncultured crenarchaeote]
Length = 159
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 31 NVFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS 85
>gi|300784312|ref|YP_003764603.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384147578|ref|YP_005530394.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399536197|ref|YP_006548859.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299793826|gb|ADJ44201.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340525732|gb|AEK40937.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398316967|gb|AFO75914.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 143
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + TV + + HNVGA+VVV P S+AGI++ERD
Sbjct: 3 IADLLRKKGS----AVATVTPETTVTALLAGLADHNVGAMVVVAP--DGSIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ G + V +IMT+ V
Sbjct: 57 VRRLNEHGPALLDGPVSEIMTKLV 80
>gi|384428861|ref|YP_005638221.1| hypothetical protein XCR_3239 [Xanthomonas campestris pv. raphani
756C]
gi|341937964|gb|AEL08103.1| CBS domain protein [Xanthomonas campestris pv. raphani 756C]
Length = 128
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V++ GE+ + GI++ERDY RK++++ RSS ST V +I
Sbjct: 5 AADAAVIEAIRLMADKSIGAVLVME-GER--LVGIVSERDYARKVVLRDRSSSSTSVAEI 61
Query: 135 MTEEV 139
M+ V
Sbjct: 62 MSHAV 66
>gi|341581159|ref|YP_004761651.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
gi|340808817|gb|AEK71974.1| hypothetical protein GQS_00355 [Thermococcus sp. 4557]
Length = 177
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ K ++++ VG+ VVVK E + GIIT+RD L K++ +GR K+ KV ++MT
Sbjct: 21 DDTVHRIAKILSKNKVGSAVVVKGDE---IVGIITDRDILDKVVAKGRDPKTVKVEEVMT 77
Query: 137 E 137
+
Sbjct: 78 K 78
>gi|94971756|ref|YP_593804.1| hypothetical protein Acid345_4731 [Candidatus Koribacter versatilis
Ellin345]
gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
versatilis Ellin345]
Length = 145
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
K D S + + + +V DA+ M + GA+ VV+ E VAG+ +ERD +RK + GR
Sbjct: 5 KLCDQSPAFVSINASVADAITMMIDRHAGAVAVVE--ENHVVAGMFSERDVMRKFALSGR 62
Query: 125 SSKSTKVGDIMTEEV 139
S++ST V + M++ V
Sbjct: 63 SAESTPVREYMSQYV 77
>gi|68445529|dbj|BAE03238.1| inosine monophosphate dehydrogenase [unclutured Candidatus
Nitrosocaldus sp.]
Length = 191
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
V+ A M + G+LVVV G+ GI+TERD +R+++ +GRS +TKVGDIM+
Sbjct: 63 NVFYAANVMRERARGSLVVVDDGKP---VGIVTERDIVRRVVAEGRSPSATKVGDIMS 117
>gi|82701472|ref|YP_411038.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82409537|gb|ABB73646.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 147
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ ++L+ GKG + + + D +VY+A+ M N+GAL+V+ G+ + GI TER
Sbjct: 2 TTVKELLE--GKGYEVASI--EPDKSVYEAMHLMAAKNIGALLVLHRGK---LVGIFTER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK R +K +V ++MT +V
Sbjct: 55 DYSRKAYSLDRLAKDIQVKELMTAQV 80
>gi|390961930|ref|YP_006425764.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
gi|390520238|gb|AFL95970.1| hypothetical protein CL1_1774 [Thermococcus sp. CL1]
Length = 177
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VVVK E + GIIT+RD L K++ +GR K+ KV ++MT
Sbjct: 21 DDTVHRVARILSKNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKTVKVEEVMT 77
Query: 137 E 137
+
Sbjct: 78 K 78
>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
sp. JS666]
Length = 146
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++ ILK+K AD + V DAVK M + N+GAL+V+ GE+ GII+ERD
Sbjct: 4 VAQILKSK---ADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLD-GEE--FVGIISERDC 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
RK+++ R + T V DIM+ V
Sbjct: 58 TRKMLLADRLPRETPVRDIMSSPV 81
>gi|262375222|ref|ZP_06068455.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|262309476|gb|EEY90606.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
gi|407007547|gb|EKE23170.1| CBS protein [uncultured bacterium]
Length = 143
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV +A+ M +GALVV + +V GI++ERDY RKI + R+S T V +IMT
Sbjct: 22 DSTVLEAITLMADKGIGALVVT---HEDNVVGILSERDYTRKIALMQRTSFDTTVNEIMT 78
Query: 137 EEV 139
+V
Sbjct: 79 SKV 81
>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
campestris str. B100]
gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 142
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D V +A++ M ++GA++V+ E + + GI++ERDY RK++++ RSS ST V +I
Sbjct: 19 AADAAVIEAIRLMADKSIGAVLVM---EGERLVGIVSERDYARKVVLRDRSSSSTSVAEI 75
Query: 135 MTEEV 139
M+ V
Sbjct: 76 MSHAV 80
>gi|240103611|ref|YP_002959920.1| hypothetical protein TGAM_1554 [Thermococcus gammatolerans EJ3]
gi|239911165|gb|ACS34056.1| Conserved hypothetical protein, containing CBS domains
[Thermococcus gammatolerans EJ3]
Length = 176
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ K + ++ VG+ VVV E + G++T+RD L K++ +G+ K KV DIMT
Sbjct: 20 DDTVHKVAKILARNRVGSAVVV---ENDEIVGVVTDRDILDKVVAKGKDPKKVKVRDIMT 76
Query: 137 E 137
+
Sbjct: 77 Q 77
>gi|330505348|ref|YP_004382217.1| signal-transduction protein [Pseudomonas mendocina NK-01]
gi|328919634|gb|AEB60465.1| signal-transduction protein [Pseudomonas mendocina NK-01]
Length = 145
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++++++K A S ++D++ D ++ + + +GALVV+ G + GI++ERD
Sbjct: 3 TVAEVIRSK---AHTSVYSVDSEDSLRDGLRILAEKGIGALVVLSGGR---LVGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y+RK+ + S K+ +IMT EV
Sbjct: 57 YVRKVALADPSMLDAKISEIMTREV 81
>gi|443471464|ref|ZP_21061531.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
gi|442901494|gb|ELS27360.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas
pseudoalcaligenes KF707]
Length = 144
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+++IL+AK + TV +A M ++GALVV++ GE + GI+TERD
Sbjct: 3 TVAEILRAK---SHTQLFSVEPTTTVLEAALMMADKDIGALVVMQGGE---LVGIVTERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
++R++ RS+ T + +IMT
Sbjct: 57 FVRRVAALERSAYGTTIEEIMT 78
>gi|301122411|ref|XP_002908932.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099694|gb|EEY57746.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 184
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
TV++A+K M N+G L V + GI+TERDYL+K+ +QG ++K T V IMT
Sbjct: 53 TVFEALKRMAGINLGCLAV--SSDDDKFVGILTERDYLKKVELQGLTAKDTLVKQIMTN 109
>gi|190575499|ref|YP_001973344.1| hypothetical protein Smlt3640 [Stenotrophomonas maltophilia K279a]
gi|190013421|emb|CAQ47056.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 120
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
DA++ M + +GA++V+ + + GI++ERDY RKI+++ RSS+ T V +IMT +V
Sbjct: 3 DAIRLMAEKGIGAVLVM---DGPRLVGILSERDYARKIVLRDRSSRDTAVAEIMTTQV 57
>gi|325183871|emb|CCA18329.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183940|emb|CCA18398.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 494
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 55 TISDILKAKGKGADG--------SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ +G +W + D TV DAV M + VG L+V + + V
Sbjct: 110 TIADVLAAQASNDEGIKAIHNYGTWKSISHDKTVQDAVSMMVTNKVGVLLVTQ--DSLGV 167
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
GIITERD L+KI + K + D+M+ V
Sbjct: 168 VGIITERDLLKKISPRTYFQKKALIKDVMSSHV 200
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V +AV++M +H+ G++++V + + V GI TE+DYL K++ + R V D+ T+
Sbjct: 338 SVAEAVEAMVRHDFGSVLIV--DKDQCVHGIFTEQDYLVKVLNEKRDPNEVLVTDMCTKV 395
Query: 139 V 139
V
Sbjct: 396 V 396
>gi|324999636|ref|ZP_08120748.1| signal-transduction protein [Pseudonocardia sp. P1]
Length = 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + D+ V + ++ +T+ N+GAL VV GE+ + GI++ERD
Sbjct: 3 IADVLKGKGS----AVTTVSPDEAVTEVLRFITEGNLGALPVVD-GER--IVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ QG + + +V +IMT EV
Sbjct: 56 VRRLHQQGGAMLNARVSEIMTAEV 79
>gi|212224081|ref|YP_002307317.1| hypothetical protein TON_0932 [Thermococcus onnurineus NA1]
gi|212009038|gb|ACJ16420.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VVVK E + GIIT+RD L K++ +GR K KV ++MT
Sbjct: 21 DDTVHRIARILSRNKVGSAVVVKDDE---IVGIITDRDILDKVVAKGRDPKDVKVEEVMT 77
Query: 137 E 137
+
Sbjct: 78 K 78
>gi|56419104|ref|YP_146422.1| inosine-5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|375007417|ref|YP_004981050.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|359286266|gb|AEV17950.1| CBS domain-containing protein yhcV [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EEV 139
+V
Sbjct: 80 NQV 82
>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
extorquens DM4]
Length = 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + DD + DA+ +T++ +GALVV+ GE ++V GII+ERD
Sbjct: 2 TVAHILAEKGS----SVVTVRPDDPLADAIHLLTENGIGALVVM--GEARTVVGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+ + G ++ V MT +V
Sbjct: 56 IMHALAAHGATALDLPVSRQMTRKV 80
>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
gi|319765647|ref|YP_004131148.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EEV 139
+V
Sbjct: 80 NQV 82
>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
gi|448236783|ref|YP_007400841.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
gi|445205625|gb|AGE21090.1| forespore-specific sporulation protein [Geobacillus sp. GHH01]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL VV+ G+ V G+IT+RD ++ QG+ + KV ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRVSSQGKDPSTVKVAEVMT 79
Query: 137 EEV 139
+V
Sbjct: 80 NQV 82
>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 158
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 48 EHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA 107
E G++ + DI+ + + L T+ V +A K M ++ VG+L+VV E+ ++
Sbjct: 4 EEGYDDVLVRDIMSSPPI----TTLPMTS---VKEAAKIMLENRVGSLIVV--NERNTLL 54
Query: 108 GIITERDYLRKIIVQGRSSKSTKVGDIMT 136
GI+T+ D +R+++ +G +S +VGDIMT
Sbjct: 55 GILTKTDIIREVVAKGLDPESVRVGDIMT 83
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
+ TDD+V A M +HN+G L V+ P +K V GI+T+ D ++
Sbjct: 88 YVYTDDSVERAASLMGEHNIGHLPVLDPETEKPV-GIVTKTDIVK 131
>gi|146279621|ref|YP_001169779.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
gi|145557862|gb|ABP72474.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
17025]
Length = 139
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W D V + + M ++GAL V G + G+IT+RD + +++ +GR K+TK
Sbjct: 13 WVEADTPVSEVARQMKADDIGALPV---GRDDRLIGMITDRDLVLRVLAEGRDPKTTKAS 69
Query: 133 DIMTE 137
D+MTE
Sbjct: 70 DVMTE 74
>gi|407645157|ref|YP_006808916.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
gi|407308041|gb|AFU01942.1| hypothetical protein O3I_019915 [Nocardia brasiliensis ATCC 700358]
Length = 144
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG D TV + ++ +HN+GA+VV GE + GI++ERD
Sbjct: 3 IAEILRRKG----CDVATVAPDTTVRSLLATLAEHNIGAVVVTPDGE--GIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G T V DIMT +V
Sbjct: 57 VRTLHARGAELLDTPVADIMTTDV 80
>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + TV +A + M+Q N+GAL VV+ G+ V G+IT+RD + QG+ ST V +
Sbjct: 19 VSPNQTVQEAAQIMSQKNIGALPVVENGQ---VKGMITDRDITLRTSAQGKDPASTPVSE 75
Query: 134 IMTEEV 139
IMT V
Sbjct: 76 IMTNRV 81
>gi|451947312|ref|YP_007467907.1| cAMP-binding and CBS domain-containing putative signal-transduction
protein [Desulfocapsa sulfexigens DSM 10523]
gi|451906660|gb|AGF78254.1| cAMP-binding and CBS domain-containing putative signal-transduction
protein [Desulfocapsa sulfexigens DSM 10523]
Length = 642
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 37 RFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALV 96
R VS+ ++ S + D++K K + GS ++ +A SM +H VG+L+
Sbjct: 155 RHHKVSNRSGDDLYLFSVRVGDLVKTLRKVSSGS--------SIQEAAASMAEHRVGSLL 206
Query: 97 VVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P +++++ GIIT+RD K++ G + V +IMT V
Sbjct: 207 VYDPADEENIVGIITDRDLRSKVVAAGLDY-NLPVENIMTGPV 248
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIV--QGRSSKSTKVGDI 134
D TVY+A K M ++N+G++V+++ GE + GI+TERD + + I GR + KV +I
Sbjct: 32 DGTVYEAAKLMKENNIGSVVIMEEGELR---GIVTERDLITRYIAAEDGRRPEDVKVSEI 88
Query: 135 MTEE 138
MT++
Sbjct: 89 MTKD 92
>gi|226359682|ref|YP_002777460.1| hypothetical protein ROP_02680 [Rhodococcus opacus B4]
gi|226238167|dbj|BAH48515.1| hypothetical protein [Rhodococcus opacus B4]
Length = 142
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + +V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 ISDVLRNKGP----AVVTVDPEMSVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R+I +G + +V DIMT V
Sbjct: 56 VRRIHERGPDILNARVVDIMTTSV 79
>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 182
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VYDAV+ N+G LV K G ++ G+++ERDY+ KI + GR+SK T V +I
Sbjct: 49 DTPVYDAVQKFAAFNIGCLVTTDKAG---NMTGVVSERDYICKIALLGRTSKETPVKEIA 105
Query: 136 T 136
T
Sbjct: 106 T 106
>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [Rhodobacterales
bacterium HTCC2255]
gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
proteobacterium HTCC2255]
Length = 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D V+DAV +M++ N G++VVV +K V G++TERD + K++ + + K T + I
Sbjct: 28 SPDTNVFDAVNAMSKKNYGSVVVV--DTEKKVIGVVTERDIMNKVVGKELNPKETLLSSI 85
Query: 135 MTE 137
MTE
Sbjct: 86 MTE 88
>gi|404421975|ref|ZP_11003678.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658419|gb|EJZ13153.1| hypothetical protein MFORT_16124 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+LK KG + + + + TV + + +T+ N+GA+VV+ P + +AGI++ERD
Sbjct: 3 IADVLKNKGT----AVVTISPETTVTELLAGLTELNIGAMVVMGP---EGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+RK+ +G S + V +IMT
Sbjct: 56 VRKLHERGSSLLAQPVSEIMT 76
>gi|337285150|ref|YP_004624624.1| inosine-5'-monophosphate dehydrogenase II [Pyrococcus yayanosii
CH1]
gi|334901084|gb|AEH25352.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
yayanosii CH1]
Length = 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VV+K E + GI+TERD L K++ +G+ K+ KV +IMT
Sbjct: 21 DDTVHKVARVLSRNKVGSAVVMKGDE---ILGIVTERDILDKVVAKGKDPKAIKVEEIMT 77
Query: 137 E 137
+
Sbjct: 78 K 78
>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
gi|158332181|dbj|BAF89666.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S IL +K S + + D ++ DAVKS+++H +GA+V V + +AGI++ERD
Sbjct: 2 TVSAILNSK----PSSMVTISPDASLTDAVKSLSEHRIGAIVAVD--DNGRLAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + V+G S V +MT V
Sbjct: 56 VVRILGVRGPEVLSEPVSAVMTRAV 80
>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 140
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+L + TV DA + M NVGA++VV + + GI TERD + ++I +GR + +T+
Sbjct: 15 FLTAPPETTVSDAARLMADRNVGAVLVVA---DEHLLGIFTERDAVFRVIAKGRDANTTQ 71
Query: 131 VGDIMT 136
+ ++MT
Sbjct: 72 LTEVMT 77
>gi|451981720|ref|ZP_21930068.1| hypothetical protein NITGR_620030 [Nitrospina gracilis 3/211]
gi|451761068|emb|CCQ91333.1| hypothetical protein NITGR_620030 [Nitrospina gracilis 3/211]
Length = 136
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++DIL+ G L ++ +V DA M Q++VG+L+V + GE GI+TERD+
Sbjct: 1 MTDILEEVGNFMSSPVLRIDSEASVQDAAILMEQNHVGSLIVEQYGED---IGILTERDF 57
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+K++ +G++ + K +IM+
Sbjct: 58 TQKVLSKGKNPEEIKATEIMS 78
>gi|256810616|ref|YP_003127985.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256793816|gb|ACV24485.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 194
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D T+YD MT++N+GA+V+V E GI+TERD +++++ SK+ K
Sbjct: 18 ITATKDMTIYDIANIMTENNIGAVVIV---ENNKPVGILTERDIVKRVV-----SKNLKP 69
Query: 132 GDIMTEEV 139
D++ EEV
Sbjct: 70 KDVLAEEV 77
>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 119
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+A++ M + VGA++V+ E + GI++ERDY RK++++ RSS +T V +IM+ EV
Sbjct: 3 EAIRLMAEKAVGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAEV 57
>gi|397689681|ref|YP_006526935.1| signal-transduction protein with CBS domains [Melioribacter roseus
P3M]
gi|395811173|gb|AFN73922.1| putative signal-transduction protein with CBS domains
[Melioribacter roseus P3M]
Length = 142
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T +V DAV M +HN+G LV V E K V G+ +ERD ++++I +G + STK+ D+M
Sbjct: 18 TGTSVADAVSFMAEHNIG-LVPVLDDEGKLV-GVFSERDLVKRVIAKGLNINSTKIDDVM 75
Query: 136 TEEV 139
T E+
Sbjct: 76 TREL 79
>gi|66045596|ref|YP_235437.1| hypothetical protein Psyr_2360 [Pseudomonas syringae pv. syringae
B728a]
gi|422675469|ref|ZP_16734813.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256303|gb|AAY37399.1| CBS [Pseudomonas syringae pv. syringae B728a]
gi|330973187|gb|EGH73253.1| CBS domain-containing protein [Pseudomonas syringae pv. aceris str.
M302273]
Length = 146
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|333922072|ref|YP_004495653.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
gi|333484293|gb|AEF42853.1| hypothetical protein AS9A_4420 [Amycolicicoccus subflavus DQS3-9A1]
Length = 143
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG TV + + ++ +HNVGALVVV+ G V GI++ERD
Sbjct: 3 ISDLLRNKGSNVS----TANPKMTVAELIAALAEHNVGALVVVEDGR---VIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+RK+ G + V IMT +V
Sbjct: 56 VRKLHRSGAAVLKAPVSAIMTTDV 79
>gi|384420129|ref|YP_005629489.1| hypothetical protein XOC_3226 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463042|gb|AEQ97321.1| CBS domain protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 142
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+D V +A+ M + VGA++V+ + + GI++ERDY RK++++ RSS +T V +IM
Sbjct: 20 SDAAVIEAIGLMAEKAVGAVLVM---DGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIM 76
Query: 136 TEEV 139
+ EV
Sbjct: 77 SAEV 80
>gi|302186319|ref|ZP_07262992.1| CBS [Pseudomonas syringae pv. syringae 642]
Length = 146
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALKLMAEKNIGAL---PVVEGSVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|386817222|ref|ZP_10104440.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
gi|386421798|gb|EIJ35633.1| putative signal transduction protein with CBS domains [Thiothrix
nivea DSM 5205]
Length = 142
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TIS +L KG S ++ V +AVK+M + VGAL+V+ G+ K GII+E+
Sbjct: 3 TISQVLARKG-----SEVYSVAPAARVIEAVKTMAEKRVGALLVLDNGKLK---GIISEQ 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RKI+++ R ++ +V + MT V
Sbjct: 55 DYTRKIVLRDRIAEHLRVDEAMTSPV 80
>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 162
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+ T+ IL+ KG C+ V++A+ M + ++G+++VV + + + GI TE
Sbjct: 16 TVTVRQILEEKGSRTYSVRPDCS----VFEALGVMAEFDIGSVIVV---DNERLVGIFTE 68
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RDY RK++++G S+ V ++MT
Sbjct: 69 RDYARKVVLKGLGSRDVSVSELMT 92
>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 146
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +G G + T D ++ DA + + QH +GA V+V G++ VAGI++ERD +R
Sbjct: 6 ILKSKARG--GGIVSVTPDASIGDAARLLAQHKIGA-VLVMTGDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEEV 139
+ + KV D+MT EV
Sbjct: 61 LADAMDVCVTAKVRDLMTAEV 81
>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
12444]
gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
[Novosphingobium aromaticivorans DSM 12444]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 55 TISDILKAKGKGADGSWLW-CTTDDTVYDAVKSMTQHNVGALVVVKPGEQ--KSVAGIIT 111
TI+ ++ +G+ +W C DD+V DAV + ++ +GAL P E VAGI +
Sbjct: 2 TIAQVIAGRGE------VWSCHADDSVADAVDMLARYRIGAL----PVEDGTNGVAGIFS 51
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERD +R + G ++ KV D+MT V
Sbjct: 52 ERDMIRCLHKHGEAALHMKVRDMMTAPV 79
>gi|421505750|ref|ZP_15952685.1| signal-transduction protein [Pseudomonas mendocina DLHK]
gi|400343447|gb|EJO91822.1| signal-transduction protein [Pseudomonas mendocina DLHK]
Length = 146
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +++L++K ++++ ++D++ D ++ M + VGALVV+ G + GI++ER
Sbjct: 3 TAAEVLRSKPY----AYVYSVDSEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY+RK+ + S TK+ IMT +V
Sbjct: 56 DYVRKVALADLSVLETKISHIMTRDV 81
>gi|126641980|ref|YP_001084964.1| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
Length = 112
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GALVV + GEQ V GI++ERDY RK+ + RSS ST V +IMT +V
Sbjct: 1 MAEKGIGALVVAE-GEQ--VVGILSERDYTRKVTLMERSSYSTTVAEIMTAKV 50
>gi|16081707|ref|NP_394084.1| inosine-5'-monophosphate dehydrogenase [Thermoplasma acidophilum
DSM 1728]
gi|10639778|emb|CAC11750.1| inosine-5'-monophosphate dehydrogenase related protein
[Thermoplasma acidophilum]
Length = 145
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 57 SDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116
SDI++ K G D + Y+A K M Q +VG ++ + GE K G++TE DY+
Sbjct: 11 SDIMRKYDKIMPG-------DTSAYEAAKIMAQDHVGFAIIAENGEIK---GMVTEWDYI 60
Query: 117 RKIIVQGRSSKSTKVGDIMTEEV 139
KII Q R K ++ +IM +
Sbjct: 61 NKIIAQDRDPKKVRIDEIMNSPI 83
>gi|334341972|ref|YP_004546952.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334093326|gb|AEG61666.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 146
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A + M+QHNVG++ VV+ G+ G+IT+RD +I QG +ST+V IMT
Sbjct: 19 DQSAQEAARLMSQHNVGSIPVVENGK---CVGMITDRDITLRITSQGLDPQSTQVQSIMT 75
Query: 137 EEV 139
+V
Sbjct: 76 TDV 78
>gi|406911913|gb|EKD51615.1| signal transduction protein [uncultured bacterium]
Length = 148
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTD-DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
TT++ +LK KG + +W D+V AVK M Q VGAL+V+K +V G+ +E
Sbjct: 3 TTVNQLLKRKG-----NQIWSVAPTDSVDKAVKLMAQRKVGALMVMK---DNAVVGVFSE 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD R + +G S+ + V ++M+ +V
Sbjct: 55 RDLARNMAHKGFSNPNIPVSEMMSRQV 81
>gi|331695746|ref|YP_004331985.1| signal transduction protein [Pseudonocardia dioxanivorans CB1190]
gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
[Pseudonocardia dioxanivorans CB1190]
Length = 144
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
I+D+L KG+ W T V +AV+ + ++ +GAL+V GE + + GI++ERD
Sbjct: 2 NIADVLDTKGRTVHSVVPWAT----VAEAVERLEKYRIGALLV-SDGENR-IRGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G S V DIMT V
Sbjct: 56 VIRELARRGNRLLSCNVEDIMTRNV 80
>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
mendocina ymp]
Length = 146
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
++D++ D ++ M + VGALVV+ G + GI++ERDY+RK+ + S TK+ IM
Sbjct: 21 SEDSLVDGLRIMAEKGVGALVVMSGGR---LVGIVSERDYVRKVALADLSVLETKISHIM 77
Query: 136 TEEV 139
T +V
Sbjct: 78 TRDV 81
>gi|452821297|gb|EME28329.1| putative signal-transduction protein containing cAMP-binding and
CBS domains isoform 1 [Galdieria sulphuraria]
Length = 233
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDIL-----KAKGKGADGSWLWCTTDDTVYDAVKSMT 88
++ F S+ A +EE FE + D+L K + + S L V DAV M
Sbjct: 61 LAQYFHSMEPAVVEE--FEHVLVKDMLDHNKSKVHERLNEQSILAVELSSQVKDAVHLMA 118
Query: 89 QHNVGALVVVKPGEQ------KSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
++ VG ++V + V G+ TER+Y+R +++G+ + +VGD+M
Sbjct: 119 KYGVGCVMVTSDHSKGALHPYPDVIGMFTEREYIRNCLLKGKDKDNCRVGDVM 171
>gi|209966508|ref|YP_002299423.1| hypothetical protein RC1_3249 [Rhodospirillum centenum SW]
gi|209959974|gb|ACJ00611.1| CBS domain protein [Rhodospirillum centenum SW]
Length = 138
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + D +V A + M + +VGAL V GE + GI+T+RD L +++ QGR +T V
Sbjct: 13 FLSPDASVQQAARLMAELDVGALPV---GEAADLRGILTDRDVLIRVVAQGRDPATTPVA 69
Query: 133 DIMTEEV 139
+M+ +V
Sbjct: 70 AVMSSDV 76
>gi|397729251|ref|ZP_10496038.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
gi|396934858|gb|EJJ01981.1| CBS domain pair family protein [Rhodococcus sp. JVH1]
Length = 142
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R+I +G + +V DIMT V
Sbjct: 56 VRRIHERGPDILNARVVDIMTTSV 79
>gi|440744999|ref|ZP_20924299.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
gi|440373615|gb|ELQ10373.1| hypothetical protein A988_16363 [Pseudomonas syringae BRIP39023]
Length = 146
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|111017173|ref|YP_700145.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|384099896|ref|ZP_10000967.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|419965476|ref|ZP_14481420.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|424856737|ref|ZP_18280945.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|432350979|ref|ZP_19594303.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
gi|110816703|gb|ABG91987.1| probable IMP dehydrogenase [Rhodococcus jostii RHA1]
gi|356662872|gb|EHI43051.1| IMP dehydrogenase [Rhodococcus opacus PD630]
gi|383842566|gb|EID81829.1| IMP dehydrogenase [Rhodococcus imtechensis RKJ300]
gi|414569104|gb|EKT79853.1| IMP dehydrogenase [Rhodococcus opacus M213]
gi|430769666|gb|ELB85697.1| IMP dehydrogenase [Rhodococcus wratislaviensis IFP 2016]
Length = 142
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + V + + +HNVGALVV E +V GI+TERD
Sbjct: 3 IADVLRNKGP----AVVTVDPEMPVSTLIGELARHNVGALVVT---ENDAVVGIVTERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R+I +G + +V DIMT V
Sbjct: 56 VRRIHERGPDILNARVVDIMTTSV 79
>gi|397565547|gb|EJK44669.1| hypothetical protein THAOC_36775, partial [Thalassiosira oceanica]
Length = 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
VYDAV+ +NVG LV +++G+++ERDY+ KI + G++S+ T V +I T+
Sbjct: 202 VYDAVQKFAAYNVGCLVTTD--SDGNISGVVSERDYVCKIALLGKTSRETSVREISTK 257
>gi|385682177|ref|ZP_10056105.1| hypothetical protein AATC3_39898 [Amycolatopsis sp. ATCC 39116]
Length = 142
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
Query: 56 ISDILKAKGKGADGSWLWCTT---DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
I+D+L++KG W T + ++ D + + +HNVGA+VV + +AGI++E
Sbjct: 3 IADLLRSKGN-------WVATVRPESSITDLLAGLAEHNVGAMVVAG---EDGIAGIVSE 52
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RD +RK+ G + V +IMT
Sbjct: 53 RDVVRKLNEHGPALLEHPVSEIMT 76
>gi|317129330|ref|YP_004095612.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
gi|315474278|gb|ADU30881.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK- 127
G C DD VY+A M Q +VGA+ + E + + G+IT+RD I+V+G + K
Sbjct: 10 GDVEICNPDDNVYEAALKMKQFDVGAIPIC---EGRQLLGMITDRD----IVVRGVAEKR 62
Query: 128 --STKVGDIMTEEV 139
ST+V D+MTE++
Sbjct: 63 PNSTQVTDVMTEQL 76
>gi|305663917|ref|YP_003860205.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
gi|304378486|gb|ADM28325.1| putative signal transduction protein with CBS domains [Ignisphaera
aggregans DSM 17230]
Length = 134
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVYDA+K M +HN+ +L+V E V G+IT +D + +++ +G K+TK+ +I+++
Sbjct: 20 TVYDAIKLMERHNIASLIVT--DENDVVLGVITAKDIVIRVLAKGLDIKTTKIIEIVSKP 77
Query: 139 V 139
V
Sbjct: 78 V 78
>gi|403054435|ref|ZP_10908919.1| hypothetical protein AberL1_23541 [Acinetobacter bereziniae LMG
1003]
gi|445416078|ref|ZP_21434367.1| CBS domain protein [Acinetobacter sp. WC-743]
gi|444762514|gb|ELW86877.1| CBS domain protein [Acinetobacter sp. WC-743]
Length = 143
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A+ M +GA+VV E V GI++ERDY RKI + R+S T V +IMT +
Sbjct: 24 TVLEAITLMANKGIGAVVVT---EDTKVVGILSERDYTRKIALMQRTSDHTTVAEIMTSK 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|302525541|ref|ZP_07277883.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302434436|gb|EFL06252.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 143
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + TV + + + +HNVGA+VVV + +AGI++ERD
Sbjct: 3 IADVLQRKG----ATVATVSPGTTVAELLAGLARHNVGAMVVVD--AEGGIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+RK+ G + V DIMT
Sbjct: 57 VRKLNDHGPAVLEGPVADIMT 77
>gi|422640856|ref|ZP_16704281.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
gi|330953245|gb|EGH53505.1| CBS domain-containing protein [Pseudomonas syringae Cit 7]
Length = 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNEVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|254774594|ref|ZP_05216110.1| CBS domain-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+R++ V G S S V IM
Sbjct: 56 VRQLHVHGASVLSRPVSKIM 75
>gi|41408317|ref|NP_961153.1| hypothetical protein MAP2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466251|ref|YP_881000.1| CBS domain-containing protein [Mycobacterium avium 104]
gi|417750273|ref|ZP_12398641.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|440777872|ref|ZP_20956656.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41396673|gb|AAS04536.1| hypothetical protein MAP_2219c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118167538|gb|ABK68435.1| CBS domain protein [Mycobacterium avium 104]
gi|336458247|gb|EGO37228.1| putative signal-transduction protein containing cAMP-binding and
CBS [Mycobacterium avium subsp. paratuberculosis S397]
gi|436721788|gb|ELP45863.1| CBS domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + +T+ N+GA+VVV + V GI++ERD
Sbjct: 3 IADVLRNKG----AAVVTINPDATVRELIAGLTEQNIGAMVVVGA---EGVLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+R++ V G S S V IM
Sbjct: 56 VRQLHVHGASVLSRPVSKIM 75
>gi|433603543|ref|YP_007035912.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
gi|407881396|emb|CCH29039.1| hypothetical protein BN6_17170 [Saccharothrix espanaensis DSM
44229]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + D +V + V ++ +HNVGA+VVV +AGI++ERD
Sbjct: 3 IADVLRNKGS----AVATVRADASVAELVAALAEHNVGAMVVVA---DSGIAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G + V DIMT EV
Sbjct: 56 VRRLHDRGADLLAAAVADIMTAEV 79
>gi|125974837|ref|YP_001038747.1| signal-transduction protein [Clostridium thermocellum ATCC 27405]
gi|256004903|ref|ZP_05429876.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281418708|ref|ZP_06249727.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|385780279|ref|YP_005689444.1| signal transduction protein [Clostridium thermocellum DSM 1313]
gi|419722457|ref|ZP_14249600.1| CBS domain containing protein [Clostridium thermocellum AD2]
gi|419726592|ref|ZP_14253613.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|125715062|gb|ABN53554.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum ATCC 27405]
gi|255991083|gb|EEU01192.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 2360]
gi|281407792|gb|EFB38051.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum JW20]
gi|316941959|gb|ADU75993.1| putative signal transduction protein with CBS domains [Clostridium
thermocellum DSM 1313]
gi|380769876|gb|EIC03775.1| CBS domain containing protein [Clostridium thermocellum YS]
gi|380781469|gb|EIC11124.1| CBS domain containing protein [Clostridium thermocellum AD2]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + +V +A + M +HNVG++ V G V GI+T+RD + + + G++ K TKV
Sbjct: 13 YVSPQSSVVEAAQLMQKHNVGSIPVYDQG----VVGIVTDRDIVVRNVAHGKTPKDTKVQ 68
Query: 133 DIMTEEV 139
D+MT +V
Sbjct: 69 DVMTSQV 75
>gi|452949833|gb|EME55299.1| IMP dehydrogenase [Rhodococcus ruber BKS 20-38]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG D +V + + ++ +HNVGALVVV E +V GI++ERD
Sbjct: 3 IADVLRNKGP----VVATIEPDRSVEEMIGTLARHNVGALVVV---EGDAVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ G + + +V DIM+ V
Sbjct: 56 VRRLHHHGPALLAARVRDIMSTTV 79
>gi|397625460|gb|EJK67804.1| hypothetical protein THAOC_11112 [Thalassiosira oceanica]
Length = 153
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +AV+ + +NVGALV Q +++G+++ERDY+ KI + RSSK KV +I T
Sbjct: 48 DSPVIEAVEKLAAYNVGALVTTDV--QGNLSGVLSERDYVTKIALLERSSKEVKVKEIST 105
Query: 137 E 137
+
Sbjct: 106 K 106
>gi|389851632|ref|YP_006353866.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
gi|388248938|gb|AFK21791.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. ST04]
Length = 178
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ + ++++ VG+ VV+ E+ + GIITERD L K++ +G+ + +V +IMT
Sbjct: 21 DDTVHKVARVLSRNKVGSAVVM---EKDEILGIITERDILDKVVAKGKDPRQVRVREIMT 77
Query: 137 EE 138
++
Sbjct: 78 KD 79
>gi|225174496|ref|ZP_03728495.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
gi|225170281|gb|EEG79076.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
Length = 645
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 32 PVVSSRFESVSSARM------EEHGFESTTISD--ILKAKGKGADGSWLWCTTDDTVYDA 83
P SS+F + +ARM + G S + D + K + C + + + D
Sbjct: 133 PEFSSQFSKILTARMRLIYHIQMSGASSGYVIDQPMHKRVADLMSAPVITCLSGNEITDL 192
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
++MT NV +++V E+ GIITE+D ++K++ G KS K DIM+E +
Sbjct: 193 ARTMTSRNVSSIIVTDQDEKP--IGIITEKDLVKKVVAAGCFVKSLKAEDIMSENL 246
>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
Length = 624
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 35 SSRFESVSSARMEEHGFES--TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNV 92
++R +V+S ES T ++D+++ S + C+ D TV +A + MT+ NV
Sbjct: 130 NARIRAVASKLRSTAASESLRTRVADLMET-------SLVTCSADATVQEAAQIMTERNV 182
Query: 93 GALVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+L+V++ Q + GIIT+RD R+++ + + ++S V ++MT
Sbjct: 183 SSLLVMESAGANQSPLVGIITDRDLRRRVLAEAKPAESL-VSEVMT 227
>gi|348670893|gb|EGZ10714.1| hypothetical protein PHYSODRAFT_563613 [Phytophthora sojae]
Length = 546
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 55 TISDILKAKGKGADGS--------WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ + + W +TV+DAV +M + N+G+L+V + E +
Sbjct: 93 TIADVLNAREQELATNKALFDFEEWESIAGTETVHDAVLTMVERNIGSLIVTEAKE--GI 150
Query: 107 AGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
GI+TERD L+KI + S+ V D+M+ +
Sbjct: 151 VGIVTERDILKKISPRTVLSEEKFVHDVMSSHI 183
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +AV+ M + N GA++VV +++ V GI TERDY+RK++ + + V D+M+
Sbjct: 340 TVAEAVEEMAKRNFGAVLVV--DKEQRVLGIFTERDYIRKVLFELKDPTKLLVTDVMS 395
>gi|116753622|ref|YP_842740.1| signal-transduction protein [Methanosaeta thermophila PT]
gi|116665073|gb|ABK14100.1| putative signal-transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 185
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L D V DA M NVG+L+VV+ + GIITERD ++K++ + + ++V
Sbjct: 16 LTVDADTDVLDAANRMISANVGSLIVVQGAKP---IGIITERDLVKKVVARAEDPRKSRV 72
Query: 132 GDIMT 136
GD+M
Sbjct: 73 GDVMN 77
>gi|407768617|ref|ZP_11115995.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288301|gb|EKF13779.1| hypothetical protein TH3_04029 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 149
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+V DAV MT+ +GA+++V +AGI TERD + +++ +G + ST + +MT
Sbjct: 22 DSVMDAVNMMTERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASTPLKQVMT 78
>gi|298710996|emb|CBJ32303.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 118
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
M+ +NVG L+V K G V+GII+ERDY+ KI + G++SK T V +I T
Sbjct: 1 MSAYNVGCLIVTKNG---VVSGIISERDYVCKIALLGKASKDTTVKEICT 47
>gi|171060349|ref|YP_001792698.1| signal-transduction protein [Leptothrix cholodnii SP-6]
gi|170777794|gb|ACB35933.1| putative signal-transduction protein with CBS domains [Leptothrix
cholodnii SP-6]
Length = 150
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
A + M +H+VGALVVV EQ GI+T+RD + ++ +G VGDIM+ ++
Sbjct: 25 AAQLMRKHHVGALVVVDAAEQTRPVGIVTDRDLVLGLMAEGLDPALFTVGDIMSTDL 81
>gi|289673655|ref|ZP_06494545.1| CBS, partial [Pseudomonas syringae pv. syringae FF5]
Length = 95
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|442806120|ref|YP_007374269.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741970|gb|AGC69659.1| cystathionine beta-synthase domain-containing protein [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 149
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + + D T+ + + M +HNVGA+ VV +Q + GI+T+RD + + I G+ ST
Sbjct: 10 SVVTVSPDTTIKEVAELMQKHNVGAIPVV---DQSGLKGIVTDRDLVVRNIASGKDPFST 66
Query: 130 KVGDIMTEEV 139
V +IMT +V
Sbjct: 67 PVREIMTSQV 76
>gi|440719396|ref|ZP_20899825.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440725046|ref|ZP_20905318.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
gi|440368228|gb|ELQ05273.1| hypothetical protein A979_01330 [Pseudomonas syringae BRIP34876]
gi|440369031|gb|ELQ06025.1| hypothetical protein A987_03363 [Pseudomonas syringae BRIP34881]
Length = 146
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|289192998|ref|YP_003458939.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D TVY+ MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKDMTVYEIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEEV 139
+ EEV
Sbjct: 73 LAEEV 77
>gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236622|ref|YP_004589238.1| hypothetical protein Geoth_3289 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423721087|ref|ZP_17695269.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363477|gb|AEH49157.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366440|gb|EID43731.1| CBS domain containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 148
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV +A + M+Q N+GAL V + G+ V G+IT+RD + QG+ ST V ++MT
Sbjct: 23 NQTVQEAAQIMSQKNIGALPVAENGQ---VKGMITDRDITLRTSAQGKDPASTPVSEVMT 79
Query: 137 EEV 139
V
Sbjct: 80 NRV 82
>gi|301107764|ref|XP_002902964.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098082|gb|EEY56134.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 438
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 10/73 (13%)
Query: 55 TISDILKAKGKGADGS--------WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSV 106
TI+D+L A+ + + W +TV+DAV +M + N+G+L+V K Q+ +
Sbjct: 94 TIADVLNAREQELATNKALFDFEEWESIAGTETVHDAVLTMVERNIGSLIVTKA--QEGI 151
Query: 107 AGIITERDYLRKI 119
GI+TERD L+KI
Sbjct: 152 VGIVTERDILKKI 164
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +AV+ M + + GA++VV +++ V GI TERDY+RK++ + + V D+M+
Sbjct: 327 TVAEAVEEMAKRDFGAVLVV--DKEQRVLGIFTERDYIRKVLFEVKDPTKLLVTDVMS 382
>gi|443644060|ref|ZP_21127910.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
gi|443284077|gb|ELS43082.1| CBS domain protein [Pseudomonas syringae pv. syringae B64]
Length = 146
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|14590193|ref|NP_142258.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
horikoshii OT3]
gi|3256656|dbj|BAA29339.1| 178aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 178
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V+ K ++++ VG+ VV+ GE V G++TERD L K++ +G+ K KV +IMT+
Sbjct: 22 DSVHKVAKVLSKNKVGSAVVMDKGE---VLGVVTERDILDKVVAKGKDPKEVKVEEIMTK 78
>gi|225016723|ref|ZP_03705915.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
DSM 5476]
gi|224950527|gb|EEG31736.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
DSM 5476]
Length = 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DTV +A + M +H++G L V+K G + + G++T+RD + + + R ++ KVG+IMT
Sbjct: 18 DTVSNAAEIMCRHDIGVLPVMKNGNK--LVGMLTDRDIVLRCVADKRDQENCKVGEIMT 74
>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485746|dbj|BAJ51400.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 140
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S +L AD + TT +VY A K M + VG+LVV GE+ G++TERD
Sbjct: 3 VSSMLVKDVMTADVVTVSPTT--SVYAAAKIMAEEEVGSLVVTV-GEKP--VGVLTERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R+++ G S + T V D+MT V
Sbjct: 58 VRRVVAAGLSPRRTSVEDVMTSPV 81
>gi|381166724|ref|ZP_09875938.1| CBS domain [Phaeospirillum molischianum DSM 120]
gi|380684297|emb|CCG40750.1| CBS domain [Phaeospirillum molischianum DSM 120]
Length = 131
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL AK KGA G + D V +A + + +H +GA+ V++ G + GI++ERD
Sbjct: 2 TVRAILAAKPKGA-GELVSIAPDALVVEAAQLLARHRIGAVPVIEAG---ILVGILSERD 57
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + + +T+V +MT EV
Sbjct: 58 IVRALARSASTLGTTRVRGLMTAEV 82
>gi|422620669|ref|ZP_16689345.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
gi|330901025|gb|EGH32444.1| CBS domain-containing protein [Pseudomonas syringae pv. japonica
str. M301072]
Length = 146
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M + N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMAEKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|327310840|ref|YP_004337737.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947319|gb|AEA12425.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ DAV + QHN+GALVVV+ E +I+ERD +R + R + ST V M+
Sbjct: 24 DETLLDAVDRLAQHNIGALVVVRREEPDVALAVISERDVVRAL--NMRMALSTPVEAFMS 81
Query: 137 EEV 139
V
Sbjct: 82 RGV 84
>gi|312113812|ref|YP_004011408.1| signal transduction protein with CBS domains [Rhodomicrobium
vannielii ATCC 17100]
gi|311218941|gb|ADP70309.1| putative signal transduction protein with CBS domains
[Rhodomicrobium vannielii ATCC 17100]
Length = 143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+++ ILK KG+ L D TV++ V+ + + +GA+VVV EQ V GI++ERD
Sbjct: 2 SVAGILKGKGRKV----LSVLPDRTVFEVVRLLHANRIGAVVVVD--EQHHVLGIVSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G ++ V D MT V
Sbjct: 56 IVRILAERGAAALEETVADHMTRPV 80
>gi|452821296|gb|EME28328.1| putative signal-transduction protein containing cAMP-binding and
CBS domains isoform 2 [Galdieria sulphuraria]
Length = 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 34 VSSRFESVSSARMEEHGFESTTISDIL-----KAKGKGADGSWLWCTTDDTVYDAVKSMT 88
++ F S+ A +EE FE + D+L K + + S L V DAV M
Sbjct: 176 LAQYFHSMEPAVVEE--FEHVLVKDMLDHNKSKVHERLNEQSILAVELSSQVKDAVHLMA 233
Query: 89 QHNVGALVVVKPGEQKS------VAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
++ VG ++V + + V G+ TER+Y+R +++G+ + +VGD+M
Sbjct: 234 KYGVGCVMVTSDHSKGALHPYPDVIGMFTEREYIRNCLLKGKDKDNCRVGDVM 286
>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 194
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 8/63 (12%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +VYD MT+HN+GA+V+V E GI+TERD +++++ SK+ K +++
Sbjct: 23 DMSVYDIANIMTEHNIGAVVIV---EDNKPVGILTERDIVKRVV-----SKNLKPKEVLA 74
Query: 137 EEV 139
EEV
Sbjct: 75 EEV 77
>gi|383935285|ref|ZP_09988722.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
gi|383703701|dbj|GAB58813.1| CBS domain-containing protein [Rheinheimera nanhaiensis E407-8]
Length = 619
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S R +S +AR E S IS +L+ + S TV+ A + MT+H V
Sbjct: 131 SERRKSTKAARQTETDLHSAQISSLLQRQPVCLPAS-------ATVWQAAQIMTEHGVSC 183
Query: 95 LVVVKPG--EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
L+++ EQ +AGIIT+RD +++ G S+ T V IMT
Sbjct: 184 LLILHDDDTEQGKLAGIITDRDIRSRLVAPGLKSE-TCVSTIMT 226
>gi|357021739|ref|ZP_09083970.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356479487|gb|EHI12624.1| signal-transduction protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 132
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M HNVGA+VVV+P +AG+++ERD +RK+ +G + V +IMT V
Sbjct: 17 MATHNVGAMVVVRPDGSGGIAGMVSERDVVRKLHQRGANLLDQPVSEIMTSLV 69
>gi|57640493|ref|YP_182971.1| hypothetical protein TK0558 [Thermococcus kodakarensis KOD1]
gi|57158817|dbj|BAD84747.1| hypothetical protein, conserved, containing CBS domains and PHD
finger motif [Thermococcus kodakarensis KOD1]
Length = 177
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDT++ + + ++ VG+ VVV E + + GIIT+RD L K++ +G+ K V D+MT
Sbjct: 20 DDTIHKVARILARNKVGSAVVVD--ENEEIVGIITDRDILDKVVAKGKDPKKVLVKDVMT 77
>gi|162456297|ref|YP_001618664.1| hypothetical protein sce8014 [Sorangium cellulosum So ce56]
gi|161166879|emb|CAN98184.1| predicted CBS domain [Sorangium cellulosum So ce56]
Length = 306
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T YDAV++M ++VGA V+V G++ +AGI+T+RD +I+ ++ST + DIM++E
Sbjct: 19 TAYDAVRAMMDNHVGA-VLVHDGQR--LAGIVTDRDIALEIVAGDLDARSTMLRDIMSDE 75
Query: 139 V 139
+
Sbjct: 76 I 76
>gi|427403130|ref|ZP_18894127.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
gi|425718141|gb|EKU81093.1| hypothetical protein HMPREF9710_03723 [Massilia timonae CCUG 45783]
Length = 149
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTK 130
+ CT D+TV A M +H+VG LVV+ +V GI+T+RD + +I G S
Sbjct: 12 ICCTRDETVQGAAMLMRRHHVGDLVVIDTDGGGNVPLGILTDRDIVLAVIAPGLDPASLL 71
Query: 131 VGDIMTEEV 139
GDIM++++
Sbjct: 72 AGDIMSDDL 80
>gi|407641205|ref|YP_006804964.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
gi|407304089|gb|AFT97989.1| hypothetical protein O3I_000135 [Nocardia brasiliensis ATCC 700358]
Length = 139
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W D+TV A + M + VG+LV+ ++ + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WIAKDETVGKAARVMAELGVGSLVIADDNDR--MCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + K I QGRS +T+ ++
Sbjct: 53 DIVVKCIAQGRSPGTTRAAEL 73
>gi|330507966|ref|YP_004384394.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928774|gb|AEB68576.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 184
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V A K M NVG+L++V + GI+TERD +RK+I QG ++ KV +IM+
Sbjct: 21 DLDVLSAAKRMGSANVGSLIIVS---RDKTTGILTERDLVRKVIAQGVDPRNLKVREIMS 77
Query: 137 EEV 139
V
Sbjct: 78 SPV 80
>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
Length = 144
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILKAKG D + V DA + + + +G LVV + G+Q + GI++ERD
Sbjct: 3 VQQILKAKG---DDKVITIKPGTLVSDAARILAERRIGGLVVSEDGKQ--IQGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R + V+G + S ++ D+MT
Sbjct: 58 VRSLAVRGATCLSDRIDDMMT 78
>gi|347524337|ref|YP_004781907.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343461219|gb|AEM39655.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 152
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D+ V +A + M Q+ +G++VVV ++ V GIITERD + +++ + R T V +
Sbjct: 20 ITPDEPVIEAARKMKQYEIGSVVVV--SQRGEVIGIITERDLVTRVVAENRDPLKTTVRE 77
Query: 134 IMT 136
+MT
Sbjct: 78 VMT 80
>gi|332158424|ref|YP_004423703.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
gi|331033887|gb|AEC51699.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
sp. NA2]
Length = 178
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV+ + ++++ VG+ VV+ E+ + GI+TERD L K++ +G+ K KV +IMT
Sbjct: 21 NDTVHKVARILSKNKVGSAVVM---EKDEILGIVTERDILDKVVAKGKDPKEVKVEEIMT 77
>gi|258516448|ref|YP_003192670.1| hypothetical protein Dtox_3316 [Desulfotomaculum acetoxidans DSM
771]
gi|257780153|gb|ACV64047.1| CBS domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
Length = 144
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T TV +A + M+QHN+G+L VV+ G+ G++T+RD + +G ++ +TKVG +
Sbjct: 17 TPQQTVAEAAQLMSQHNIGSLPVVENGQ---CVGMLTDRDITLRAAAKGANAATTKVGAV 73
Query: 135 MTEEV 139
MT+EV
Sbjct: 74 MTKEV 78
>gi|209522266|ref|ZP_03270897.1| CBS domain containing protein [Burkholderia sp. H160]
gi|209497300|gb|EDZ97524.1| CBS domain containing protein [Burkholderia sp. H160]
Length = 155
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTTLHDAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ++ + +M +
Sbjct: 56 ILTLSTNGGSVGTSTIRKVMDD 77
>gi|420157289|ref|ZP_14664127.1| CBS domain protein [Clostridium sp. MSTE9]
gi|394756582|gb|EJF39662.1| CBS domain protein [Clostridium sp. MSTE9]
Length = 144
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
DD++ A + M QHN+G++ V +Q+ V GI+T+RD + +G++ K KV DI
Sbjct: 17 NPDDSIERAAQLMKQHNIGSIPVC---DQEKVVGIVTDRDIATRSAAKGQNVKQQKVCDI 73
Query: 135 MTE 137
M++
Sbjct: 74 MSQ 76
>gi|421858959|ref|ZP_16291208.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
gi|410831478|dbj|GAC41645.1| FOG: CBS domain [Paenibacillus popilliae ATCC 14706]
Length = 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 10/73 (13%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK-- 127
S + CT D +Y+A M QH+ G + +V GE+ V G++T+RD ++++G + K
Sbjct: 11 SIVTCTAQDNIYEAAVKMKQHDTGFIPIVD-GER--VIGVVTDRD----LVIRGMADKHP 63
Query: 128 -STKVGDIMTEEV 139
ST V D+MTE+V
Sbjct: 64 GSTSVRDVMTEDV 76
>gi|300787075|ref|YP_003767366.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|384150417|ref|YP_005533233.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|399538958|ref|YP_006551620.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|299796589|gb|ADJ46964.1| signal transduction protein [Amycolatopsis mediterranei U32]
gi|340528571|gb|AEK43776.1| signal transduction protein [Amycolatopsis mediterranei S699]
gi|398319728|gb|AFO78675.1| signal transduction protein [Amycolatopsis mediterranei S699]
Length = 138
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV+DA +M + VGAL + GE + G+IT+RD + K++ +G+ ++ VG++
Sbjct: 19 DTVHDAAVTMARKGVGALPIC--GEDNRLKGMITDRDIVVKVLAEGKDPRAVHVGELAQG 76
Query: 138 EV 139
EV
Sbjct: 77 EV 78
>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
Length = 173
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV 98
+SVSS H T+ D+L K DG + + T++DAV + + +GAL+ V
Sbjct: 21 QSVSSNTTVSHA----TVQDVLDKK----DGRIITIHPEQTLHDAVVLLRDNRIGALLCV 72
Query: 99 KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
E+ +AGI++ERD +RK+ Q + +V ++MT V
Sbjct: 73 D--EEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMTRTV 111
>gi|422607452|ref|ZP_16679451.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
gi|330891093|gb|EGH23754.1| CBS domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 146
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ MT+ N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMTEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +G G + T + ++ DA + + QH +GA V+V G++ VAGI++ERD +R
Sbjct: 6 ILKSKARG--GGIISVTPEASIGDAARLLAQHKIGA-VLVMNGDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEEV 139
+ + KV D+MT EV
Sbjct: 61 LADAVDVCITAKVRDLMTAEV 81
>gi|126458985|ref|YP_001055263.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126248706|gb|ABO07797.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 139
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
G A + T+D T+Y+A + M QH VG LVVV K G+++ERD +R I
Sbjct: 4 GDLASRPPVTITSDATLYEAAEKMAQHKVGLLVVVDKANPKKPIGVVSERDVIRAI 59
>gi|422633526|ref|ZP_16698662.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
gi|330943885|gb|EGH46119.1| CBS domain-containing protein [Pseudomonas syringae pv. pisi str.
1704B]
Length = 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL VV+ V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGALPVVE---GNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|187924745|ref|YP_001896387.1| hypothetical protein Bphyt_2769 [Burkholderia phytofirmans PsJN]
gi|187715939|gb|ACD17163.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
Length = 153
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNAMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ++ + +M +
Sbjct: 56 MLTLSKNGGSVGTSTIRKVMDD 77
>gi|422667633|ref|ZP_16727495.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
gi|330979504|gb|EGH78107.1| CBS domain-containing protein [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 146
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A+K M N+GAL E V G+I+ERDY RK++++GRSS T V DIM+
Sbjct: 24 DQMVLEALKLMADKNIGAL---PVVEGNVVVGVISERDYARKVVLKGRSSVGTPVRDIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
Length = 183
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
SSR A E G ++ TI+ IL+ KG + D+V AV+ + +G
Sbjct: 23 SSRNRITGPADAGEQGEQAMTIATILQRKGNDV----IQVEPSDSVLSAVRLLADQRIGC 78
Query: 95 LVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ VV G+ V GI +ERD + ++ G S+ VG++MT
Sbjct: 79 VPVVANGQ---VVGIFSERDLVYRVAQDGPSALDHSVGEVMT 117
>gi|379706287|ref|YP_005261492.1| hypothetical protein NOCYR_0023 [Nocardia cyriacigeorgica GUH-2]
gi|374843786|emb|CCF60848.1| conserved protein of unknown function; putative CBS domain
[Nocardia cyriacigeorgica GUH-2]
Length = 139
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W + D TV A + M + VG+LV+ E + + GIIT+R
Sbjct: 2 TTARDIMKPGAQ-------WISRDQTVAQAARVMAELGVGSLVIAD--ENERMCGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + K I QG S T+ ++
Sbjct: 53 DIVVKCIAQGLSPSGTRAAEL 73
>gi|430743766|ref|YP_007202895.1| signal transduction protein [Singulisphaera acidiphila DSM 18658]
gi|430015486|gb|AGA27200.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Singulisphaera acidiphila DSM 18658]
Length = 144
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D+LK+KG G + + TV +A+ M Q+N+G+L VV Q + GII+ERD
Sbjct: 3 VRDVLKSKG----GQIISIEPEATVAEAIARMVQNNIGSLPVVDA--QDHLIGIISERDL 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEE 138
LR I G V + M+ +
Sbjct: 57 LRGIHNHGEKICGKHVAEFMSRD 79
>gi|220929202|ref|YP_002506111.1| signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
gi|219999530|gb|ACL76131.1| putative signal transduction protein with CBS domains [Clostridium
cellulolyticum H10]
Length = 141
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT 73
>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 147
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 55 TISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TI D+L KG AD +W + TV+ A+ M++ NVGA+VV+ +Q+ + GI +ER
Sbjct: 3 TIKDLLAQKG--AD---IWSVRPETTVFQALSLMSEKNVGAVVVL--DDQQKMIGIFSER 55
Query: 114 DYLRKIIVQGRSSKSTK---VGDIMTEEV 139
DY RK I S + + V ++MT EV
Sbjct: 56 DYARKTIGAIGSQECPRDLPVKELMTTEV 84
>gi|376261376|ref|YP_005148096.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
gi|373945370|gb|AEY66291.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium sp. BNL1100]
Length = 141
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V DIMT
Sbjct: 19 SILDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVSDIMT 73
>gi|409095429|ref|ZP_11215453.1| hypothetical protein TzilA_02130 [Thermococcus zilligii AN1]
Length = 177
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV+ A + + ++ VG+ VVV E + + GIIT+RD L K++ + + K+ V ++MT
Sbjct: 20 DDTVHKAAQILARNKVGSAVVVD--ENERIVGIITDRDILDKVVAKEKDPKNVLVREVMT 77
Query: 137 EE 138
E+
Sbjct: 78 EK 79
>gi|91784441|ref|YP_559647.1| hypothetical protein Bxe_A1358 [Burkholderia xenovorans LB400]
gi|385208771|ref|ZP_10035639.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
gi|91688395|gb|ABE31595.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
gi|385181109|gb|EIF30385.1| CBS domain-containing protein [Burkholderia sp. Ch1-1]
Length = 153
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+ + G S ++ + +M
Sbjct: 56 ILTLSKNGGSVGTSTIRKVM 75
>gi|257075658|ref|ZP_05570019.1| CBS domain-containing protein [Ferroplasma acidarmanus fer1]
Length = 133
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+YD K MT+ N G+L++ G +S+ GI+TERD ++ I G S + VGD+ T+E
Sbjct: 13 TIYDGAKKMTEENKGSLLL---GSAESMKGIVTERDIIKAI--AGGKSLTAPVGDVATKE 67
>gi|260566223|ref|ZP_05836693.1| CBS domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261755217|ref|ZP_05998926.1| CBS domain-containing protein [Brucella suis bv. 3 str. 686]
gi|376276134|ref|YP_005116573.1| hypothetical protein BCA52141_I3178 [Brucella canis HSK A52141]
gi|260155741|gb|EEW90821.1| CBS domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261744970|gb|EEY32896.1| CBS domain-containing protein [Brucella suis bv. 3 str. 686]
gi|363404701|gb|AEW14996.1| CBS domain-containing protein [Brucella canis HSK A52141]
Length = 121
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVC--DEAGHIEGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRALAAQESQAMSKSVAEVMTSKV 80
>gi|271964532|ref|YP_003338728.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
gi|270507707|gb|ACZ85985.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
Length = 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 63 KGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQ 122
+GKG D + + + TV + ++ + +HN+GA+VV + G S+AGI++ERD +R++ +
Sbjct: 8 QGKGTDVTTVH--PEATVTELLELLAEHNIGAVVVSEDG--SSIAGIVSERDVVRRLNDR 63
Query: 123 GRSSKSTKVGDIMTEEV 139
G + V IMT +V
Sbjct: 64 GADVLTAPVSSIMTTDV 80
>gi|269126481|ref|YP_003299851.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
gi|268311439|gb|ACY97813.1| putative signal transduction protein with CBS domains
[Thermomonospora curvata DSM 43183]
Length = 142
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG S TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRTKGS----SVATVEPTATVRELLAKLAELNIGAVVVSPDG--ATIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G + V DIMT EV
Sbjct: 57 VRRLHERGAALLDAPVSDIMTAEV 80
>gi|326202075|ref|ZP_08191945.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
gi|325987870|gb|EGD48696.1| putative signal transduction protein with CBS domains [Clostridium
papyrosolvens DSM 2782]
Length = 141
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ + ++ D K M QHNVG++ V G SV G++T+RD + + I G++ + T V
Sbjct: 13 YVEPNASIVDTAKLMQQHNVGSIPVCDKG---SVVGMVTDRDIVVRNIAIGKNPQQTPVS 69
Query: 133 DIMT 136
DIMT
Sbjct: 70 DIMT 73
>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 194
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ TV++AV + ++VG LV +++G+I+ERDY++KI + G+SSK T V I T
Sbjct: 62 ESTVFEAVNKLAAYDVGCLVT--KDANGNLSGVISERDYVQKIALLGKSSKDTLVRQIST 119
Query: 137 E 137
+
Sbjct: 120 K 120
>gi|170695907|ref|ZP_02887047.1| CBS domain containing protein [Burkholderia graminis C4D1M]
gi|170139205|gb|EDT07393.1| CBS domain containing protein [Burkholderia graminis C4D1M]
Length = 152
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDATLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ++ + +M +
Sbjct: 56 ILTLKENGGSVGTSTIRKVMDD 77
>gi|333372052|ref|ZP_08463988.1| CBS domain protein [Desmospora sp. 8437]
gi|332974960|gb|EGK11870.1| CBS domain protein [Desmospora sp. 8437]
Length = 142
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ D VY A M QHN+G++ VV+ G+ V G++T+RD + + + + ++ + T VG+
Sbjct: 15 VSPQDNVYKAASLMRQHNIGSVPVVENGQ---VRGMVTDRDLVLRALAEQKNEQVT-VGE 70
Query: 134 IMTEEV 139
+MT +V
Sbjct: 71 VMTNQV 76
>gi|358011810|ref|ZP_09143620.1| CBS domain pair family protein [Acinetobacter sp. P8-3-8]
Length = 143
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV A+ M +GA+VV + V GI++ERDY RKI + R+S T V +IMT +
Sbjct: 24 TVLAAITLMANKGIGAVVVT---QDSKVVGILSERDYTRKIALMQRTSDHTTVAEIMTPK 80
Query: 139 V 139
V
Sbjct: 81 V 81
>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
Ellin345]
gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
Koribacter versatilis Ellin345]
Length = 142
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V +AV M ++NVGA+ V+ G + GI +ERD + +++V+G ST V +MT
Sbjct: 21 DQSVIEAVHFMVENNVGAVPVLDHGH---LVGIFSERDVMTRVVVRGMDPHSTTVETVMT 77
Query: 137 EE 138
E
Sbjct: 78 PE 79
>gi|15668834|ref|NP_247637.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496100|sp|Q58069.1|Y653_METJA RecName: Full=Uncharacterized protein MJ0653
gi|1592300|gb|AAB98648.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 194
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 8/65 (12%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + ++YD MT++N+GA+V+V E GI+TERD +++++ SK+ K D+
Sbjct: 21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDV 72
Query: 135 MTEEV 139
+ EEV
Sbjct: 73 LAEEV 77
>gi|62290164|ref|YP_221957.1| hypothetical protein BruAb1_1258 [Brucella abortus bv. 1 str.
9-941]
gi|82700086|ref|YP_414660.1| hypothetical protein BAB1_1274 [Brucella melitensis biovar Abortus
2308]
gi|148559815|ref|YP_001259171.1| CBS domain-containing protein [Brucella ovis ATCC 25840]
gi|189024399|ref|YP_001935167.1| hypothetical protein BAbS19_I11880 [Brucella abortus S19]
gi|256263764|ref|ZP_05466296.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|260546708|ref|ZP_05822447.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260754992|ref|ZP_05867340.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260758208|ref|ZP_05870556.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762035|ref|ZP_05874378.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884002|ref|ZP_05895616.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|261214246|ref|ZP_05928527.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219598|ref|ZP_05933879.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261222410|ref|ZP_05936691.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|261314029|ref|ZP_05953226.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261317884|ref|ZP_05957081.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322093|ref|ZP_05961290.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261325335|ref|ZP_05964532.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261752559|ref|ZP_05996268.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261758440|ref|ZP_06002149.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|265984308|ref|ZP_06097043.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|265988912|ref|ZP_06101469.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995163|ref|ZP_06107720.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998377|ref|ZP_06110934.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|294852589|ref|ZP_06793262.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306839078|ref|ZP_07471895.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|306840280|ref|ZP_07473054.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306844158|ref|ZP_07476751.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|376273017|ref|YP_005151595.1| hypothetical protein BAA13334_I01978 [Brucella abortus A13334]
gi|384211622|ref|YP_005600704.1| hypothetical protein [Brucella melitensis M5-90]
gi|384408728|ref|YP_005597349.1| CBS domain protein [Brucella melitensis M28]
gi|384445304|ref|YP_005604023.1| hypothetical protein [Brucella melitensis NI]
gi|423166654|ref|ZP_17153357.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|423170972|ref|ZP_17157647.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|423172946|ref|ZP_17159617.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|423178361|ref|ZP_17165005.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|423180402|ref|ZP_17167043.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|423183534|ref|ZP_17170171.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|423185526|ref|ZP_17172140.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
gi|423188661|ref|ZP_17175271.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|62196296|gb|AAX74596.1| CBS domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82616187|emb|CAJ11230.1| CBS domain [Brucella melitensis biovar Abortus 2308]
gi|148371072|gb|ABQ61051.1| CBS domain protein [Brucella ovis ATCC 25840]
gi|189019971|gb|ACD72693.1| CBS domain protein [Brucella abortus S19]
gi|260095758|gb|EEW79635.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
gi|260668526|gb|EEX55466.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
gi|260672467|gb|EEX59288.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675100|gb|EEX61921.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
gi|260873530|gb|EEX80599.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
gi|260915853|gb|EEX82714.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920994|gb|EEX87647.1| CBS domain-containing protein [Brucella ceti B1/94]
gi|260924687|gb|EEX91255.1| CBS domain-containing protein [Brucella ceti M13/05/1]
gi|261294783|gb|EEX98279.1| CBS domain-containing protein [Brucella ceti M644/93/1]
gi|261297107|gb|EEY00604.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
gi|261301315|gb|EEY04812.1| CBS domain-containing protein [Brucella neotomae 5K33]
gi|261303055|gb|EEY06552.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
gi|261738424|gb|EEY26420.1| CBS domain-containing protein [Brucella sp. F5/99]
gi|261742312|gb|EEY30238.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
gi|262552845|gb|EEZ08835.1| CBS domain-containing protein [Brucella ceti M490/95/1]
gi|262766276|gb|EEZ12065.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263093864|gb|EEZ17826.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
gi|264661109|gb|EEZ31370.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
gi|264662900|gb|EEZ33161.1| CBS domain-containing protein [Brucella sp. 83/13]
gi|294821178|gb|EFG38177.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306275433|gb|EFM57170.1| CBS domain-containing protein [Brucella inopinata BO1]
gi|306289807|gb|EFM60989.1| CBS domain-containing protein [Brucella sp. BO2]
gi|306405625|gb|EFM61887.1| CBS domain-containing protein [Brucella sp. NF 2653]
gi|326409275|gb|ADZ66340.1| CBS domain protein [Brucella melitensis M28]
gi|326538985|gb|ADZ87200.1| CBS domain containing protein [Brucella melitensis M5-90]
gi|349743295|gb|AEQ08838.1| CBS domain protein [Brucella melitensis NI]
gi|363400623|gb|AEW17593.1| CBS domain containing protein [Brucella abortus A13334]
gi|374538306|gb|EHR09814.1| hypothetical protein M19_01505 [Brucella abortus bv. 1 str. NI474]
gi|374544138|gb|EHR15616.1| hypothetical protein M17_00344 [Brucella abortus bv. 1 str. NI435a]
gi|374544465|gb|EHR15942.1| hypothetical protein M1A_00344 [Brucella abortus bv. 1 str. NI486]
gi|374545142|gb|EHR16605.1| hypothetical protein M1E_02601 [Brucella abortus bv. 1 str. NI488]
gi|374547933|gb|EHR19385.1| hypothetical protein M1G_01502 [Brucella abortus bv. 1 str. NI010]
gi|374548362|gb|EHR19810.1| hypothetical protein M1I_01503 [Brucella abortus bv. 1 str. NI016]
gi|374559223|gb|EHR30612.1| hypothetical protein M1M_00343 [Brucella abortus bv. 1 str. NI259]
gi|374560236|gb|EHR31619.1| hypothetical protein M1K_00344 [Brucella abortus bv. 1 str. NI021]
Length = 143
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRALAAQESQAMSKSVAEVMTSKV 80
>gi|327401358|ref|YP_004342197.1| signal transduction protein [Archaeoglobus veneficus SNP6]
gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
[Archaeoglobus veneficus SNP6]
Length = 180
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 74 CT--TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT D+T++ A K M + VG++VVV E GI+TE+D L K++ + R+ K+
Sbjct: 16 CTGNPDETLFSAAKRMLEFGVGSIVVV---EDHKPLGIVTEKDILEKVVAKNRTPSEVKL 72
Query: 132 GDIMT 136
+IM+
Sbjct: 73 KEIMS 77
>gi|163843518|ref|YP_001627922.1| hypothetical protein BSUIS_A1304 [Brucella suis ATCC 23445]
gi|225627721|ref|ZP_03785758.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225852750|ref|YP_002732983.1| hypothetical protein BMEA_A1301 [Brucella melitensis ATCC 23457]
gi|237815671|ref|ZP_04594668.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|256369677|ref|YP_003107187.1| hypothetical protein BMI_I1267 [Brucella microti CCM 4915]
gi|297248558|ref|ZP_06932276.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340790871|ref|YP_004756336.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
gi|163674241|gb|ABY38352.1| CBS domain containing protein [Brucella suis ATCC 23445]
gi|225617726|gb|EEH14771.1| CBS domain-containing protein [Brucella ceti str. Cudo]
gi|225641115|gb|ACO01029.1| CBS domain containing protein [Brucella melitensis ATCC 23457]
gi|237788969|gb|EEP63180.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
gi|255999839|gb|ACU48238.1| CBS domain containing protein [Brucella microti CCM 4915]
gi|297175727|gb|EFH35074.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
gi|340559330|gb|AEK54568.1| CBS domain containing protein [Brucella pinnipedialis B2/94]
Length = 157
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 16 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSERD 69
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 70 VVRALAAQESQAMSKSVAEVMTSKV 94
>gi|15607061|ref|NP_214443.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
gi|2984323|gb|AAC07845.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
Length = 619
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++VY+AVK M + N +V E+ GIITERD L+K+I + + K KV ++MT
Sbjct: 170 ESVYEAVKKMVEDNSSCAIVKSEDEE----GIITERDVLKKVIYRDLNPKEVKVKEVMT 224
>gi|375141344|ref|YP_005001993.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
gi|359821965|gb|AEV74778.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium rhodesiae NBB3]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R + +G V +IMT
Sbjct: 56 VRALQTRGAELLRMPVSEIMT 76
>gi|294498144|ref|YP_003561844.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
gi|295703495|ref|YP_003596570.1| hypothetical protein BMD_1359 [Bacillus megaterium DSM 319]
gi|384048025|ref|YP_005496042.1| inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
gi|294348081|gb|ADE68410.1| CBS domain protein [Bacillus megaterium QM B1551]
gi|294801154|gb|ADF38220.1| CBS domain protein [Bacillus megaterium DSM 319]
gi|345445716|gb|AEN90733.1| Inosine-5'-monophosphate dehydrogenase protein [Bacillus megaterium
WSH-002]
Length = 139
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CTT D VY+ M + NVGA+ +V ++ + G+IT+RD + K I + + + S+KV D
Sbjct: 15 CTTLDNVYEVAVKMKEWNVGAIPIV---DRDQLVGMITDRDLVIKGIAEKKPN-SSKVTD 70
Query: 134 IMTEEV 139
+M+EE+
Sbjct: 71 VMSEEL 76
>gi|116619880|ref|YP_822036.1| signal-transduction protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223042|gb|ABJ81751.1| putative signal-transduction protein with CBS domains [Candidatus
Solibacter usitatus Ellin6076]
Length = 147
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DTV + K M +VG+L V + + + GIIT+RD K++ R
Sbjct: 12 VCCIPTDTVSNVAKRMKTEDVGSLPVCESRTSRKLVGIITDRDLAIKVVADSRDPNKVTT 71
Query: 132 GDIMT 136
GD+MT
Sbjct: 72 GDVMT 76
>gi|315426521|dbj|BAJ48152.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
gi|343485273|dbj|BAJ50927.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
Length = 138
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV DAVK M ++ V +LVV + QK G++TERD +R+ I +GR + KVG+IM+
Sbjct: 23 TVADAVKKMLENEVWSLVVTR---QKLPIGVVTERDIIRRCIGKGRPM-TIKVGEIMS 76
>gi|229819321|ref|YP_002880847.1| hypothetical protein Bcav_0824 [Beutenbergia cavernae DSM 12333]
gi|229565234|gb|ACQ79085.1| CBS domain containing membrane protein [Beutenbergia cavernae DSM
12333]
Length = 143
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV-VKPGEQKSVAGIITERD 114
I+D+++ KG + + TV + V + +GALVV V GE +V+GI++ERD
Sbjct: 3 IADVIRRKG----ADVFTVSPETTVAELVAELDSRRIGALVVSVDGGE--TVSGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + V G + V DIMTE+V
Sbjct: 57 VVRHLHVDGAAVLQRPVADIMTEKV 81
>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
6068]
gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
staleyi DSM 6068]
Length = 145
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK-PGEQKSVAGIITERD 114
+ DIL+ KG L C DT+ V+ + ++N+G+LVV + +++ + GIITERD
Sbjct: 3 VRDILQTKGSAV----LTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEE 138
LR + + ++T V D MT +
Sbjct: 59 LLRFAAEKRGTLENTFVADRMTRD 82
>gi|134295527|ref|YP_001119262.1| XRE family transcriptional regulator [Burkholderia vietnamiensis
G4]
gi|387902047|ref|YP_006332386.1| hypothetical protein MYA_1291 [Burkholderia sp. KJ006]
gi|134138684|gb|ABO54427.1| putative transcriptional regulator, XRE family [Burkholderia
vietnamiensis G4]
gi|387576939|gb|AFJ85655.1| CBS domain protein [Burkholderia sp. KJ006]
Length = 151
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
++++ V G + +V +M E
Sbjct: 56 IQRLHVNGGAIGDVQVRKVMDE 77
>gi|18976459|ref|NP_577816.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|18891998|gb|AAL80211.1| inosine-5'-monophosphate dehydrogenase related protein iv
[Pyrococcus furiosus DSM 3638]
Length = 134
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ T D TV +A K M + +G+LVV+ E+ +V G T+ D LR+++V G T
Sbjct: 13 LIGVTPDTTVQEASKLMMEFEIGSLVVI--DEKGNVIGFFTKSDILRRVVVPGLPY-DTP 69
Query: 131 VGDIMTEEV 139
V DIMT+E+
Sbjct: 70 VKDIMTKEL 78
>gi|304322067|ref|YP_003855710.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
gi|303300969|gb|ADM10568.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
HTCC2503]
Length = 144
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D+LK KG+ + ++ +A++ + N+GA+VV PG K+VAGI++ERD +R
Sbjct: 5 DMLKDKGR----DVVTIDHKASLAEAIEVLASKNIGAVVVTSPG--KAVAGILSERDVVR 58
Query: 118 KIIVQGRSSKSTKVGDIMTEEV 139
+ + + V DIMT EV
Sbjct: 59 VLSGAPTGFRESPVTDIMTREV 80
>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 198
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+A++ M + +GA++V+ + + GI++ERDY RK++++ R+S +T V IM+ EV
Sbjct: 3 EAIRLMAEKAIGAVLVM---DGPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAEV 57
>gi|452854892|ref|YP_007496575.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079152|emb|CCP20905.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 140
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEEV 139
+M+ EV
Sbjct: 71 VMSSEV 76
>gi|440226719|ref|YP_007333810.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
gi|440038230|gb|AGB71264.1| CBS domain-containing protein [Rhizobium tropici CIAT 899]
Length = 144
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S ++ IL+AKG+ + + TV +A K + ++ +GA+VVV PG + ++GI TE
Sbjct: 2 SVSVKAILEAKGR----DVVTTGGNTTVAEAAKILNENRIGAIVVVGPGGK--ISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD + + QG+ + +MT +V
Sbjct: 56 RDVVNAVAKQGQECLDKPIASMMTAKV 82
>gi|387128814|ref|YP_006297419.1| inosine-5'-monophosphate dehydrogenase protein [Methylophaga sp.
JAM1]
gi|386275876|gb|AFI85774.1| putative inosine-5'-monophosphate dehydrogenase protein
[Methylophaga sp. JAM1]
Length = 141
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D T+ +A M + N+G LVV G +K + G +T+RD + + + +G+ ++T VGDI
Sbjct: 15 SADTTLKEAAAKMERENIGFLVV---GSEKELNGTLTDRDIVLRAVSKGKDMQTTTVGDI 71
Query: 135 MTEEV 139
++++V
Sbjct: 72 LSKQV 76
>gi|73541445|ref|YP_295965.1| hypothetical protein Reut_A1756 [Ralstonia eutropha JMP134]
gi|72118858|gb|AAZ61121.1| CBS [Ralstonia eutropha JMP134]
Length = 155
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V A++ M ++ ++V+ ++AGI+++RDY R + + GRS+ +TKV DIMT
Sbjct: 25 DDFVLAALQLMADKDISTVLVM---HGDTLAGILSQRDYARGVELAGRSASATKVRDIMT 81
Query: 137 EEV 139
+V
Sbjct: 82 TKV 84
>gi|452974607|gb|EME74427.1| hypothetical protein BSONL12_11576 [Bacillus sonorensis L12]
Length = 148
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
L+CT D VY+A M + NVGA+ VV+ + + GI+T+RD + + I + S
Sbjct: 11 DLLYCTVLDNVYEAAVKMKEGNVGAIPVVRD-DSFELVGIVTDRDLVLRGIAD-KKPNSQ 68
Query: 130 KVGDIMTEEV 139
KV ++MT E+
Sbjct: 69 KVTNVMTTEL 78
>gi|397652199|ref|YP_006492780.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|393189790|gb|AFN04488.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 136
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ T D TV +A K M + +G+LVV+ E+ +V G T+ D LR+++V G T
Sbjct: 15 LIGVTPDTTVQEASKLMMEFEIGSLVVI--DEKGNVIGFFTKSDILRRVVVPGLPY-DTP 71
Query: 131 VGDIMTEEV 139
V DIMT+E+
Sbjct: 72 VKDIMTKEL 80
>gi|182439054|ref|YP_001826773.1| hypothetical protein SGR_5261 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467570|dbj|BAG22090.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 160
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 40 SVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK 99
+V SAR + TT DI+ + + W +T+ A + M +HNVGAL V
Sbjct: 9 AVPSARRRKSPM--TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSA 59
Query: 100 PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
G+ + GIIT+RD + + +G GD+
Sbjct: 60 NGDSDRMVGIITDRDIVVGCVAKGHDPAKVTAGDL 94
>gi|124002149|ref|ZP_01687003.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
marina ATCC 23134]
gi|123992615|gb|EAY31960.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
marina ATCC 23134]
Length = 649
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ TV++A K M+ NVG+++VV + GIIT+ D+ RK++ + + K+ V +
Sbjct: 184 CSPTHTVWEAAKIMSIFNVGSILVVN--NENYPVGIITDSDFRRKVVARQETIKTNPVTE 241
Query: 134 IMTEEV 139
IM+ V
Sbjct: 242 IMSSPV 247
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDD-TVYDAVKSMTQHNVGALVVVKPGEQKSVAGI 109
++ ILK K S + C + TV +AV M + +G+++V + +V GI
Sbjct: 3 LNKVSVVSILKEKS-----SSVHCVAEQVTVAEAVNEMNRQRIGSILV--KADDGTVTGI 55
Query: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TERD L +++ GR ++TKV ++MT +
Sbjct: 56 FTERDVLVRVVSAGRDPQATKVQEVMTPD 84
>gi|406922552|gb|EKD60005.1| cbs [uncultured bacterium]
Length = 139
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV A + NVGA++V+K GE ++ G+++ERD +RK I Q R S ST V +IMT
Sbjct: 23 TVRQACHVLDHFNVGAVLVLK-GE--ALVGLVSERDVIRKCIGQDRHSDSTLVDEIMT 77
>gi|134298322|ref|YP_001111818.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
gi|134051022|gb|ABO48993.1| putative signal-transduction protein with CBS domains
[Desulfotomaculum reducens MI-1]
Length = 145
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++ +A + M+QHNVG++ VV+ G + GI+T+RD + + QG++ ST V +MT
Sbjct: 21 SIQEATQLMSQHNVGSIPVVENG---NCVGIVTDRDIALRAVSQGQNPSSTTVQSVMT 75
>gi|354559092|ref|ZP_08978344.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
gi|353544262|gb|EHC13717.1| putative signal transduction protein with CBS domains
[Desulfitobacterium metallireducens DSM 15288]
Length = 140
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W + ++ + + + N+G++ V + K + G+IT+RD L + I QG+ K+TK
Sbjct: 13 WVDPNQSLEEVAQILASSNIGSVPVC---QDKQLMGMITDRDILVRAIAQGKDPKTTKAT 69
Query: 133 DIMTEEV 139
+IMT+EV
Sbjct: 70 EIMTKEV 76
>gi|153005216|ref|YP_001379541.1| signal-transduction protein [Anaeromyxobacter sp. Fw109-5]
gi|152028789|gb|ABS26557.1| putative signal-transduction protein with CBS domains
[Anaeromyxobacter sp. Fw109-5]
Length = 145
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + C DDT D + M + N+G + + E G IT+RD +I+ GR S +
Sbjct: 10 SAMCCRPDDTARDCARLMKEENIGFVPIC--NESDEPVGTITDRDLALRILADGRPSDA- 66
Query: 130 KVGDIMTEEV 139
K+ +MT EV
Sbjct: 67 KLDGVMTREV 76
>gi|383822248|ref|ZP_09977476.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
gi|383331808|gb|EID10303.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium phlei RIVM601174]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L++KG + T +V + + HN+GA+VVV P +AGI++ERD
Sbjct: 3 IADVLRSKGS----AVATITPQTSVAGLLTELAVHNIGAMVVVSP---DGLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G + V +IMT V
Sbjct: 56 VRALHRRGADLLTCPVSEIMTSLV 79
>gi|374606945|ref|ZP_09679759.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
gi|374387450|gb|EHQ58958.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
dendritiformis C454]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + CT D +Y+A M +H+ G + +V GE+ + G++T+RD + + + + + ST
Sbjct: 11 SIVTCTAQDNIYEAAVKMKEHDTGFIPIVD-GER--LIGVLTDRDLVIRAMAE-KHPGST 66
Query: 130 KVGDIMTEEV 139
V D+MTEEV
Sbjct: 67 SVRDVMTEEV 76
>gi|212640156|ref|YP_002316676.1| hypothetical protein Aflv_2334 [Anoxybacillus flavithermus WK1]
gi|212561636|gb|ACJ34691.1| FOG: CBS domain protein [Anoxybacillus flavithermus WK1]
Length = 154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D +V +A + M +HNVGA+ VV+ G+ V G+IT+RD + QG + ST V +
Sbjct: 30 TPDQSVQEAAQLMNEHNVGAIPVVENGK---VKGMITDRDITLRTTAQGL-TPSTPVSQV 85
Query: 135 MTEEV 139
MT V
Sbjct: 86 MTSNV 90
>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
Length = 144
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+KG D + + + V +A +++ + +G LVV + GE +V GII+ERD
Sbjct: 3 VQQILKSKG---DSAVITISPQTKVSEAAQTLAERRIGGLVVSRDGE--TVEGIISERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R + V+G + V ++MT
Sbjct: 58 VRSLAVRGVVCMTETVSEMMT 78
>gi|291444191|ref|ZP_06583581.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
gi|291347138|gb|EFE74042.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
Length = 151
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 12 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDR 64
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + + +G GD+
Sbjct: 65 DIVVGCVAKGHDPSKVTAGDL 85
>gi|220925558|ref|YP_002500860.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
gi|219950165|gb|ACL60557.1| putative signal transduction protein with CBS domains
[Methylobacterium nodulans ORS 2060]
Length = 156
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 59 ILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
I+++ G+ A L TT + T+ + + + H+VGAL V++ G+ + GII+ERD +
Sbjct: 2 IIRSVGELAMRHSLHSTTCEATITEVCRRLQDHHVGALAVLEDGK---LVGIISERDVIS 58
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
++I GR +T V +MT +
Sbjct: 59 RVIAVGREPTATTVRAVMTPD 79
>gi|239987230|ref|ZP_04707894.1| hypothetical protein SrosN1_07992 [Streptomyces roseosporus NRRL
11379]
gi|411001733|ref|ZP_11378062.1| hypothetical protein SgloC_02953 [Streptomyces globisporus C-1027]
Length = 141
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + + +G GD+
Sbjct: 55 DIVVGCVAKGHDPSKVTAGDL 75
>gi|53805171|ref|YP_113099.1| hypothetical protein MCA0583 [Methylococcus capsulatus str. Bath]
gi|53758932|gb|AAU93223.1| CBS domain protein [Methylococcus capsulatus str. Bath]
Length = 150
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTKVGDIM 135
DDT+ +A K M H+VG++VVV+ E GI+T+RD + +I+ + + + VGD+M
Sbjct: 17 DDTIVEAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLVVEILAEEVAPDAVTVGDVM 76
Query: 136 TEEV 139
+ E+
Sbjct: 77 SFEL 80
>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444308290|ref|ZP_21143939.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443488428|gb|ELT51181.1| hypothetical protein D584_00720 [Ochrobactrum intermedium M86]
Length = 143
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIAPADTLSHAVAMLNKHKIGALVVCD--EAGRIKGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRAVAAQETKAMSMPVAEVMTAKV 80
>gi|422595667|ref|ZP_16669953.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985970|gb|EGH84073.1| CBS domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 146
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|410090838|ref|ZP_11287422.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
gi|409761880|gb|EKN46924.1| hypothetical protein AAI_09261 [Pseudomonas viridiflava UASWS0038]
Length = 146
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ +LK K + + D V DA++ M + N+GAL VV+ V G+++ERD
Sbjct: 3 TVAQLLKLKAE-HNQQVHTIGPDHMVLDALRLMAEKNIGALPVVE---NGVVVGVMSERD 58
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y RK+I++GRSS T V IM+ +V
Sbjct: 59 YARKMILKGRSSVGTPVSAIMSSKV 83
>gi|365866512|ref|ZP_09406125.1| hypothetical protein SPW_6429 [Streptomyces sp. W007]
gi|364004058|gb|EHM25185.1| hypothetical protein SPW_6429 [Streptomyces sp. W007]
Length = 141
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSANGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + + +G GD+
Sbjct: 55 DIVIDCVAKGHDPAKITAGDL 75
>gi|416016195|ref|ZP_11563578.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|416027429|ref|ZP_11570676.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422407300|ref|ZP_16484299.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320324479|gb|EFW80556.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320328400|gb|EFW84403.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330882511|gb|EGH16660.1| CBS domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 146
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + E V G+IT+RD + + G S + KVGDIMT
Sbjct: 23 NDSVEKAARLMSEHNVGSIPIC---ENNKVVGVITDRDIALRSVANG-SDNNIKVGDIMT 78
>gi|71735132|ref|YP_274691.1| hypothetical protein PSPPH_2494 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555685|gb|AAZ34896.1| CBS domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 146
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|257488025|ref|ZP_05642066.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|289646587|ref|ZP_06477930.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422679348|ref|ZP_16737622.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|298158422|gb|EFH99491.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|331008696|gb|EGH88752.1| CBS domain-containing protein [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 146
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V DA++ M + N+GAL E V G+++ERDY RK+I++GRSS T V +IM+
Sbjct: 24 DQMVLDALRLMAEKNIGAL---PVVEGNVVVGVVSERDYARKVILKGRSSVGTPVREIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 NKV 83
>gi|451339062|ref|ZP_21909587.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449418235|gb|EMD23833.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 143
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + V + ++ + +HNVGALVVV ++ + GI++ERD
Sbjct: 3 ISDLLRNKG----AAVATVSPETNVTELLERLAEHNVGALVVVD--DEGGIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G V IMT+ V
Sbjct: 57 VRRLNERGPQLLDGSVAAIMTKLV 80
>gi|386847341|ref|YP_006265354.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
gi|359834845|gb|AEV83286.1| Inosine-5'-monophosphate dehydrogenase [Actinoplanes sp. SE50/110]
Length = 145
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG G + D +V + + H +GA +V + G +VAGI++ERD
Sbjct: 3 ISDILRVKGTGV----VTVPPDLSVEGLIAKLAHHRIGAAIVSRDG--TAVAGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G S + V I T +V
Sbjct: 57 VRALASHGPSVLTDPVSSIQTTQV 80
>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas vesicatoria ATCC 35937]
Length = 135
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GA V+V GE+ + GI++ERDY RK++++ RSS +T V +IM+ +V
Sbjct: 24 MAERGIGA-VLVMDGER--LVGIVSERDYARKVVLRDRSSATTSVAEIMSSQV 73
>gi|344999277|ref|YP_004802131.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
gi|344314903|gb|AEN09591.1| CBS domain containing protein [Streptomyces sp. SirexAA-E]
Length = 141
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + W +T+ A + M H VGAL V GEQ + GI+T+R
Sbjct: 2 TTAKDIMSTGAQ-------WIPAHETLDRAAQMMRDHKVGALPVSANGEQDRMVGIVTDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + K + G GD+
Sbjct: 55 DIVIKCVAAGHDPSKVTAGDL 75
>gi|385681865|ref|ZP_10055793.1| signal transduction protein [Amycolatopsis sp. ATCC 39116]
Length = 138
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T DTV DA K M + VGA+ + GE + G++T+RD + K++ +G+ ++ G++
Sbjct: 17 TSDTVLDAAKRMAELQVGAMPIC--GEDNRLKGMLTDRDIVVKVLAEGKDPRAVNAGEL 73
>gi|392417205|ref|YP_006453810.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
gi|390616981|gb|AFM18131.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium chubuense NBB4]
Length = 151
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 12 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLQGIVSERDV 64
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+RK+ G V DIMT
Sbjct: 65 VRKLHEIGPDLLRRPVSDIMT 85
>gi|326779705|ref|ZP_08238970.1| putative signal transduction protein with CBS domains [Streptomyces
griseus XylebKG-1]
gi|326660038|gb|EGE44884.1| putative signal transduction protein with CBS domains [Streptomyces
griseus XylebKG-1]
Length = 141
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ + + W +T+ A + M +HNVGAL V G+ + GIIT+R
Sbjct: 2 TTAKDIMHSGAR-------WIPAHETLDRAAQLMREHNVGALPVSANGDSDRMVGIITDR 54
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + + +G GD+
Sbjct: 55 DIVVGCVAKGHDPAKVTAGDL 75
>gi|407984288|ref|ZP_11164911.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
gi|407374129|gb|EKF23122.1| hypothetical protein C731_2879 [Mycobacterium hassiacum DSM 44199]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + + HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKGS----AVATITPETSVAGLLTELAVHNIGAMVVVSP---DGVVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G + V +IMT V
Sbjct: 56 VRALQRRGAELLTQPVSEIMTSMV 79
>gi|284033114|ref|YP_003383045.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
gi|283812407|gb|ADB34246.1| putative signal transduction protein with CBS domains [Kribbella
flavida DSM 17836]
Length = 141
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + + TV + + + +HNVGALVV G SVAGI++ERD
Sbjct: 3 INDVLRGKGN----QVVTISPEATVTELLALLAEHNVGALVVSPDG--TSVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R ++ + +V IMT +V
Sbjct: 57 VR-LLNSTPDAGEVRVSAIMTSQV 79
>gi|295677060|ref|YP_003605584.1| hypothetical protein BC1002_2012 [Burkholderia sp. CCGE1002]
gi|295436903|gb|ADG16073.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
Length = 155
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D T++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTTLHDAVITMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIM 135
+ + G S ++ + +M
Sbjct: 56 ILTLKENGGSVGTSTIRKVM 75
>gi|324998234|ref|ZP_08119346.1| hypothetical protein PseP1_05678 [Pseudonocardia sp. P1]
Length = 147
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG W T + A + +GALVV G ++ V GI++ERD
Sbjct: 3 VSDILRIKGDAVQTVLSWNTVGEA---ATRLAGPPAIGALVVSDDGFRERVDGIVSERDI 59
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ G + V D+MT V
Sbjct: 60 VRRLASDGGAVSRLTVADVMTRHV 83
>gi|398304641|ref|ZP_10508227.1| putative oxidoreductase [Bacillus vallismortis DV1-F-3]
Length = 148
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITE 112
T I D++ A +CT D VY+A M N+GA+ VV K GE ++ GI+T+
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANIGAVPVVDKDGE--TLVGIVTD 52
Query: 113 RDY-LRKIIVQGRSSKSTKVGDIMTEE 138
RD LR I + + S K+ D MTE+
Sbjct: 53 RDLVLRGIAI--KKPNSQKITDAMTEK 77
>gi|78066074|ref|YP_368843.1| XRE family transcriptional regulator [Burkholderia sp. 383]
gi|107022531|ref|YP_620858.1| XRE family transcriptional regulator [Burkholderia cenocepacia AU
1054]
gi|116689480|ref|YP_835103.1| XRE family transcriptional regulator [Burkholderia cenocepacia
HI2424]
gi|170732786|ref|YP_001764733.1| hypothetical protein Bcenmc03_1436 [Burkholderia cenocepacia MC0-3]
gi|206559832|ref|YP_002230596.1| hypothetical protein BCAL1465 [Burkholderia cenocepacia J2315]
gi|402566740|ref|YP_006616085.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|421869111|ref|ZP_16300751.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|444362871|ref|ZP_21163363.1| CBS domain protein [Burkholderia cenocepacia BC7]
gi|444373388|ref|ZP_21172755.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|77966819|gb|ABB08199.1| putative transcriptional regulator, XRE family [Burkholderia sp.
383]
gi|105892720|gb|ABF75885.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia AU 1054]
gi|116647569|gb|ABK08210.1| putative transcriptional regulator, XRE family [Burkholderia
cenocepacia HI2424]
gi|169816028|gb|ACA90611.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
gi|198035873|emb|CAR51764.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|358070860|emb|CCE51629.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
H111]
gi|402247937|gb|AFQ48391.1| XRE family transcriptional regulator [Burkholderia cepacia GG4]
gi|443591814|gb|ELT60675.1| CBS domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443596048|gb|ELT64581.1| CBS domain protein [Burkholderia cenocepacia BC7]
Length = 151
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ V G + +V +M E +
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDEPL 79
>gi|333990145|ref|YP_004522759.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333486113|gb|AEF35505.1| transcriptional regulator [Mycobacterium sp. JDM601]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + D TV + + + +HN+GA+VV+ + G+ +ERD
Sbjct: 3 IADVLRNKG----AAVVTIHPDATVMELLAGLAEHNIGAMVVIG---TDGLQGVASERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ V G S + V IMT V
Sbjct: 56 VRQLHVHGASLLARPVSAIMTRLV 79
>gi|84498468|ref|ZP_00997238.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
gi|84381211|gb|EAP97095.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD++K KG + + +D +V D + + +H +GA+VV G+ SV GI++ERD
Sbjct: 3 ISDVVKRKGD----TVITVRSDASVTDLLDLLAEHRIGAVVVSDDGQ--SVDGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G V IMT EV
Sbjct: 57 VRHLQKLGADVLGKPVSSIMTSEV 80
>gi|167579182|ref|ZP_02372056.1| CBS domain protein [Burkholderia thailandensis TXDOH]
Length = 149
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C DTV+DA M +VG L+VV G+ G++T+RD + +I +G + VG
Sbjct: 14 CRRTDTVFDAAHLMRDRHVGDLIVVDDVGQAHEPVGMLTDRDIVLSLIAKGVDPAALFVG 73
Query: 133 DIMTEEV 139
+IM+ V
Sbjct: 74 EIMSAPV 80
>gi|331700303|ref|YP_004336542.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
gi|326954992|gb|AEA28689.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
Length = 141
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + D +V D + +T N GAL V+ + +AGI++ERD
Sbjct: 3 ISDVLRNKGS----AVATIGADASVGDVIAVLTTGNYGALPVM---DGARLAGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+RK+ G T V DIMT +V
Sbjct: 56 VRKLHELGPDLVRTPVADIMTADV 79
>gi|121604049|ref|YP_981378.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
gi|120593018|gb|ABM36457.1| putative signal-transduction protein with CBS domains [Polaromonas
naphthalenivorans CJ2]
Length = 150
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T A + M +H+VGAL+VV E+ GI+T+RD + ++ +G + GDIM+ E
Sbjct: 21 TALAAAQLMRKHHVGALIVVDALEKSRPLGIVTDRDLVLALMAEGLDPEVFTAGDIMSVE 80
Query: 139 V 139
+
Sbjct: 81 L 81
>gi|114320893|ref|YP_742576.1| signal transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227287|gb|ABI57086.1| putative signal transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 138
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
WC D + + + + ++GA+ + GE + G++T+RD + + + +GR S G
Sbjct: 13 WCAPDTPIMEIARLFREKDIGAIPI---GENDRLVGMLTDRDIVCRGLAEGRDVASMTAG 69
Query: 133 DIMTEEV 139
D+MT ++
Sbjct: 70 DVMTRDI 76
>gi|115351392|ref|YP_773231.1| XRE family transcriptional regulator [Burkholderia ambifaria AMMD]
gi|170703575|ref|ZP_02894324.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171322386|ref|ZP_02911205.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|172060431|ref|YP_001808083.1| hypothetical protein BamMC406_1379 [Burkholderia ambifaria MC40-6]
gi|115281380|gb|ABI86897.1| putative transcriptional regulator, XRE family [Burkholderia
ambifaria AMMD]
gi|170131518|gb|EDT00097.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
gi|171092288|gb|EDT37662.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
gi|171992948|gb|ACB63867.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
Length = 151
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ ++ V G + +V +M E
Sbjct: 56 ILRLHVNGGAIGDVQVRKVMDE 77
>gi|418519453|ref|ZP_13085505.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704897|gb|EKQ63376.1| hypothetical protein WS7_00250 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 145
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ EV
Sbjct: 34 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAEV 83
>gi|381169714|ref|ZP_09878877.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|390990846|ref|ZP_10261124.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|418518832|ref|ZP_13084964.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|372554389|emb|CCF68099.1| CBS domain [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|380689732|emb|CCG35364.1| CBS domain [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|410702120|gb|EKQ60630.1| hypothetical protein MOU_18761 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ EV
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSAEV 80
>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. BH72]
Length = 143
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A + MT +VG++++V G ++GI TERD L ++I GR T++ ++MT +
Sbjct: 23 TVLEASRRMTDLHVGSIMIVHDGH---LSGIFTERDALVRVIAAGRDPARTRLSEVMTRD 79
>gi|82702298|ref|YP_411864.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
gi|82410363|gb|ABB74472.1| putative signal-transduction protein with CBS domains [Nitrosospira
multiformis ATCC 25196]
Length = 149
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+T+ +A K M QH+VG +VV++ + ++ GI+T+RD + +I+ G + VGDIM
Sbjct: 17 DETIGEAAKLMRQHHVGDVVVIEERDGLNIPVGIVTDRDLVVEIMATGLDAVVITVGDIM 76
Query: 136 TEEV 139
+E+
Sbjct: 77 EQEL 80
>gi|407279412|ref|ZP_11107882.1| IMP dehydrogenase [Rhodococcus sp. P14]
Length = 142
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG D +V D + + ++NVGALVV++ G +V GI++ERD
Sbjct: 3 IADVLRNKGP----VVATVDPDLSVEDMIGELARNNVGALVVMEGG---AVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ G + +V DIM+ V
Sbjct: 56 VRRLHQHGPALLDARVRDIMSTTV 79
>gi|372486716|ref|YP_005026281.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
gi|359353269|gb|AEV24440.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Dechlorosoma suillum PS]
Length = 143
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D TV +A + M VGAL+VV E + GI TERD L +++ G + T + ++
Sbjct: 19 TADLTVREACQRMAAARVGALLVV---EHGFLTGIFTERDALNRVLAPGLDPEHTLLSEV 75
Query: 135 MT 136
MT
Sbjct: 76 MT 77
>gi|224000862|ref|XP_002290103.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
gi|220973525|gb|EED91855.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
CCMP1335]
Length = 192
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D VY+AV+ +N+G LV K G+ ++G+++ERDY+ K+ + G++SK + +I
Sbjct: 59 DLPVYEAVQKFAAYNIGCLVTTDKDGK---ISGVVSERDYVCKVALLGKTSKDVSIKEIS 115
Query: 136 TE 137
T+
Sbjct: 116 TK 117
>gi|392378468|ref|YP_004985628.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
gi|356879950|emb|CCD00887.1| conserved protein of unknown function with CBS domain [Azospirillum
brasilense Sp245]
Length = 144
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+ +LK KG + DD + + + H +GA++V++ + AGI++ERD
Sbjct: 3 IAAVLKRKGT----EIITANPDDRIDAVARKLAHHKIGAVLVMR--DDGRPAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G S+ VG++MT ++
Sbjct: 57 VRAVAADGASALERPVGELMTRDL 80
>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
Length = 139
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV DA ++M + +GAL V GE + G++T+RD + K+I +G+ ++ G++
Sbjct: 19 DTVNDAARTMAREQLGALPVC--GEDNRLKGMLTDRDIVVKVIAEGKDPRAVHAGELAQG 76
Query: 138 E 138
E
Sbjct: 77 E 77
>gi|255767340|ref|NP_389378.2| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
gi|296331070|ref|ZP_06873544.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674225|ref|YP_003865897.1| oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23]
gi|321315257|ref|YP_004207544.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|402775739|ref|YP_006629683.1| oxidoreductase [Bacillus subtilis QB928]
gi|418033361|ref|ZP_12671838.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428279087|ref|YP_005560822.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
BEST195]
gi|430756023|ref|YP_007209803.1| hypothetical protein A7A1_0531 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449094190|ref|YP_007426681.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|452914312|ref|ZP_21962939.1| CBS domain protein [Bacillus subtilis MB73/2]
gi|264664572|sp|O34682.2|YLBB_BACSU RecName: Full=Uncharacterized protein YlbB
gi|225184967|emb|CAB13368.2| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484044|dbj|BAI85119.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
BEST195]
gi|296151714|gb|EFG92589.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412469|gb|ADM37588.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|320021531|gb|ADV96517.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|351469509|gb|EHA29685.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|402480922|gb|AFQ57431.1| Putative oxidoreductase [Bacillus subtilis QB928]
gi|407958901|dbj|BAM52141.1| oxidoreductase [Synechocystis sp. PCC 6803]
gi|407964479|dbj|BAM57718.1| oxidoreductase [Bacillus subtilis BEST7003]
gi|430020543|gb|AGA21149.1| Hypothetical protein YlbB [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028105|gb|AGE63344.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|452116732|gb|EME07127.1| CBS domain protein [Bacillus subtilis MB73/2]
Length = 148
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEE 138
D LR I + + S K+ D MTE+
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTEK 77
>gi|375361599|ref|YP_005129638.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421732401|ref|ZP_16171524.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347763|ref|YP_007446394.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
gi|371567593|emb|CCF04443.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074614|gb|EKE47604.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449851521|gb|AGF28513.1| protein YhcV [Bacillus amyloliquefaciens IT-45]
Length = 140
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEEV 139
+M+ +V
Sbjct: 71 VMSSQV 76
>gi|358637076|dbj|BAL24373.1| putative inosine-5'-monophosphate dehydrogenase related protein
[Azoarcus sp. KH32C]
Length = 143
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DI+K D + L T D +V +A + M VGA+++ G + +AGI TERD
Sbjct: 5 IRDIVK------DQAILTATADLSVREATRRMADAKVGAIMITAKGGK--LAGIFTERDA 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEE 138
L K++ G T + +MT +
Sbjct: 57 LVKVLANGVDPDKTTLAQVMTSD 79
>gi|384175235|ref|YP_005556620.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349594459|gb|AEP90646.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 148
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEE 138
D LR I + + S K+ D MTE+
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTEK 77
>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 147
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK K +GA + + ++ +A + + H +GA++ V ++AGI++ERD +R
Sbjct: 6 ILKTKARGA--GVVTISPQASIAEAARLLASHRIGAVIAVTA--NNAIAGILSERDIVRG 61
Query: 119 IIVQGRSSKSTKVGDIMTEEV 139
+ + S KV D+MT V
Sbjct: 62 LAQSDAACTSAKVADLMTANV 82
>gi|452976056|gb|EME75872.1| CBS domain-containing protein YhcV [Bacillus sonorensis L12]
Length = 141
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ TV +A + M+QHNVGA+ VV G K G+IT+RD + QG+ + T V +
Sbjct: 15 VSSNQTVQEAAELMSQHNVGAIPVVDQGVLK---GMITDRDITLRTTAQGQDGQ-TPVSE 70
Query: 134 IMTEEV 139
+MT V
Sbjct: 71 VMTTNV 76
>gi|374298367|ref|YP_005048558.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
gi|359827861|gb|AEV70634.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Clostridium clariflavum DSM 19732]
Length = 139
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ +TV +A + M + NVG++ V +Q V G++T+RD + + + G+S + TKV
Sbjct: 13 YVKPTNTVVEAAQVMQKLNVGSVPVF---DQNKVVGMVTDRDIVVRNVAHGKSPQDTKVQ 69
Query: 133 DIMTEEV 139
D+MT +V
Sbjct: 70 DVMTSQV 76
>gi|374607424|ref|ZP_09680225.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
gi|373555260|gb|EHP81830.1| putative signal transduction protein with CBS domains
[Mycobacterium tusciae JS617]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG S T + +V + ++ HN+GA+VVV P V GI++ERD
Sbjct: 3 IADVLRNKG----ASVATITPETSVSGLLTELSVHNIGAMVVVSP---DGVIGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R + +G V +IMT
Sbjct: 56 VRALQERGADLLRLPVSEIMT 76
>gi|296269591|ref|YP_003652223.1| putative CBS domain-containing signal transduction protein
[Thermobispora bispora DSM 43833]
gi|296092378|gb|ADG88330.1| putative signal transduction protein with CBS domains
[Thermobispora bispora DSM 43833]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I DIL+ KG + D TV + + + + N+GA+VV G ++AGI++ERD
Sbjct: 3 IRDILRKKGS----AVATVRPDATVRELLAKLAELNIGAVVVSPDG--NAIAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G V +IMT EV
Sbjct: 57 VRRLHERGAGLLDAPVSEIMTVEV 80
>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ EV
Sbjct: 29 RLMAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEV 80
>gi|383825420|ref|ZP_09980570.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
gi|383335150|gb|EID13582.1| transcriptional regulator [Mycobacterium xenopi RIVM700367]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I D+L+ KG + + D TV + + + +HN+GA+VVV P + GI++ERD
Sbjct: 3 IRDVLRNKG----AAVVTINPDATVTELLAGLAEHNIGAMVVVGP---DGLEGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R++ G + V IMT
Sbjct: 56 VRELHNHGSRVLAWPVSKIMT 76
>gi|346725849|ref|YP_004852518.1| hypothetical protein XACM_2967 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346650596|gb|AEO43220.1| CBS domain protein [Xanthomonas axonopodis pv. citrumelo F1]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ EV
Sbjct: 29 RLMAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEV 80
>gi|168700192|ref|ZP_02732469.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
Length = 155
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
W DDTV AV+ M NVG L+V EQ V GI TERD L +++
Sbjct: 22 WVDADDTVARAVEEMRAGNVGCLLVT---EQGRVVGIFTERDLLTRVL 66
>gi|381187230|ref|ZP_09894795.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
gi|379650840|gb|EIA09410.1| putative signal-transduction protein [Flavobacterium frigoris PS1]
Length = 115
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
M + N+GA++V+ E + G+++ERDY RKI+++ +SSK T V +IM
Sbjct: 1 MGEKNIGAVLVI---EDSLLKGVLSERDYARKIVLKDKSSKETLVSEIM 46
>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas perforans 91-118]
Length = 135
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GA++V+ E + GI++ERDY RK++++ R+S +T V +IM+ EV
Sbjct: 24 MAEKAIGAVLVM---EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEV 73
>gi|350265803|ref|YP_004877110.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598690|gb|AEP86478.1| CBS domain pair sporulation protein YlbB [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 148
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEE 138
D LR I + + S K+ D MTE+
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTEK 77
>gi|134099698|ref|YP_001105359.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|291008298|ref|ZP_06566271.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
gi|133912321|emb|CAM02434.1| putative signal-transduction protein with CBS domains
[Saccharopolyspora erythraea NRRL 2338]
Length = 143
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS+IL KG +D + + T V + ++ + HN+GA+ VV GE + + GI++ERD
Sbjct: 3 ISEILSKKG--SDVATIRPTA--AVSELLRMLAHHNIGAMAVV--GEGEDLLGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G + V +IMT V
Sbjct: 57 VRRLDERGAELLTATVAEIMTTSV 80
>gi|221309365|ref|ZP_03591212.1| hypothetical protein Bsubs1_08271 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313692|ref|ZP_03595497.1| hypothetical protein BsubsN3_08207 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318614|ref|ZP_03599908.1| hypothetical protein BsubsJ_08141 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322888|ref|ZP_03604182.1| hypothetical protein BsubsS_08252 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|2339998|emb|CAB11348.1| YlbB protein [Bacillus subtilis subsp. subtilis str. 168]
Length = 150
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDY-LRKIIVQGRSSKSTK 130
+CT D VY+A M NVGA+ VV + GE ++ GI+T+RD LR I ++ +S+ K
Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDEDGE--TLVGIVTDRDLVLRGIAIKKPNSQ--K 69
Query: 131 VGDIMTEE 138
+ D MTE+
Sbjct: 70 ITDAMTEK 77
>gi|114330974|ref|YP_747196.1| signal-transduction protein [Nitrosomonas eutropha C91]
gi|114307988|gb|ABI59231.1| putative signal-transduction protein with CBS domains [Nitrosomonas
eutropha C91]
Length = 149
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D +V +A + M Q++VGAL+V+ + + G+IT+RD + +++ G ++ V D+M
Sbjct: 17 DGSVLEAARMMRQYHVGALIVIDKVNDRVIPVGVITDRDLVVEVLATGLDKEAITVDDVM 76
Query: 136 TEEV 139
T+E+
Sbjct: 77 TQEL 80
>gi|307730415|ref|YP_003907639.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307584950|gb|ADN58348.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
Length = 152
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTPLHDAVNTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ++ + +M +
Sbjct: 56 ILTLKENGGSVGTSTIRKVMDD 77
>gi|392381228|ref|YP_005030425.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
gi|356876193|emb|CCC96950.1| conserved protein of unknown function; cystathionine beta synthase
domain [Azospirillum brasilense Sp245]
Length = 161
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 68 DGSWLWCTTDDTVYDAVKSMTQHNVGALVVV--KPGEQKSVAGIITERDYLRKIIVQGRS 125
D + + +V DA M + V AL+V +P +S+ GI TERD +++ GR
Sbjct: 13 DQQLVCLPPEASVRDAAVLMAERRVAALLVTQDRPKGGRSLKGIFTERDLAARVVAAGRD 72
Query: 126 SKSTKVGDIMT 136
+T++ ++MT
Sbjct: 73 PATTRLAEVMT 83
>gi|315230214|ref|YP_004070650.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
gi|315183242|gb|ADT83427.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
Length = 135
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDT+ +A + M + ++G+LVV+ E V G T+ D +R++IV G +T V +IMT
Sbjct: 21 DDTIQEACRIMVKFDIGSLVVI---ENDRVVGFFTKSDIIRRVIVPGLPY-TTPVKEIMT 76
Query: 137 EEV 139
E+
Sbjct: 77 REL 79
>gi|153009268|ref|YP_001370483.1| hypothetical protein Oant_1938 [Ochrobactrum anthropi ATCC 49188]
gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 143
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + DT+ AV + +H +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIAPADTLSHAVAMLNKHKIGALVVC--DEAGRIKGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRAVAAQETKAMSMPVTEVMTAKV 80
>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
Length = 144
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+KG D + + T V +A + + + +G LVV + GE +V GII+ERD
Sbjct: 3 VQQILKSKG---DSAVITITPTTKVSEAAQILAERRIGGLVVSRDGE--TVDGIISERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R + V+G + V ++MT
Sbjct: 58 VRSLAVRGVVCMTETVSEMMT 78
>gi|114320376|ref|YP_742059.1| signal-transduction protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226770|gb|ABI56569.1| putative signal-transduction protein with CBS domains
[Alkalilimnicola ehrlichii MLHE-1]
Length = 145
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T+ +LK KG + D V +A+K+M +VG ++V++ G S+ GI TER
Sbjct: 3 NTLHAVLKDKGV----ALYSVDADVPVAEAIKTMADGHVGCVLVMEKG---SLRGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D + +++ G+ T V ++MT EV
Sbjct: 56 DVMIRVVHDGKDPAQTPVSEVMTREV 81
>gi|238027743|ref|YP_002911974.1| XRE family transcriptional regulator [Burkholderia glumae BGR1]
gi|237876937|gb|ACR29270.1| Putative transcriptional regulator, XRE family [Burkholderia glumae
BGR1]
Length = 156
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDAMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G + +V +M E +
Sbjct: 56 ILRLKANGGAIGDVQVRKVMDEPL 79
>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
Length = 174
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 49 HGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAG 108
HG +T++ +L+AKG + +DTV AV+++ +GALVV + ++ G
Sbjct: 30 HG--QSTVAKLLEAKGD----AIFAIRPNDTVGHAVEALRDKRIGALVVTD--QNGALQG 81
Query: 109 IITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
I++ERD +R++ + V DIMT EV
Sbjct: 82 ILSERDIVRRLAETPGHTLPQLVEDIMTREV 112
>gi|452948756|gb|EME54234.1| signal transduction protein [Amycolatopsis decaplanina DSM 44594]
Length = 143
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + + + V + ++ + +HNVGALVVV + + GI++ERD
Sbjct: 3 ISDLLRNKG----AAVATVSPETNVTELLERLAEHNVGALVVVDA--EGGIVGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G V IMT+ V
Sbjct: 57 VRRLNERGPQLLDGSVSAIMTKMV 80
>gi|406707153|ref|YP_006757505.1| hypothetical protein HIMB59_00001240 [alpha proteobacterium HIMB59]
gi|406652929|gb|AFS48328.1| CBS domain protein [alpha proteobacterium HIMB59]
Length = 153
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+ DI K K + + D TV + M ++GA+ VV E + G+++ER
Sbjct: 2 TTVGDIQKVK---LNEICRFFGPDSTVSEIADMMDLQDIGAVPVV--NENNLLMGVVSER 56
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D +RK++ GR S DIMT +V
Sbjct: 57 DIVRKLVKNGRDSDLVTAKDIMTSKV 82
>gi|374853591|dbj|BAL56495.1| hypothetical conserved protein [uncultured alpha proteobacterium]
Length = 152
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T + TV A + MT+H G++VVV + V GI TERD R+++ G +T + +
Sbjct: 26 TPETTVRRAAELMTEHACGSVVVVDAAGR--VVGIFTERDLTRRVVAAGLDPDTTPLSAV 83
Query: 135 MTEE 138
MT E
Sbjct: 84 MTPE 87
>gi|163800688|ref|ZP_02194588.1| hypothetical protein 1103602000593_AND4_00458 [Vibrio sp. AND4]
gi|159175037|gb|EDP59834.1| hypothetical protein AND4_00458 [Vibrio sp. AND4]
Length = 629
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKST 129
D ++ +A + M Q NV +L++V+P Q V GIIT+RD +++ +G S +
Sbjct: 166 DQSIQEAAQLMAQDNVSSLLIVEPDFVLDEDDPQSPVVGIITDRDLCTRVLAEGLSPQD- 224
Query: 130 KVGDIMTEEV 139
+V +MT EV
Sbjct: 225 EVSTVMTTEV 234
>gi|384565116|ref|ZP_10012220.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
gi|384520970|gb|EIE98165.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora glauca K62]
Length = 138
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
+ L+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ +
Sbjct: 11 NPLYAETSETVTHAARTMADKGVGALPIR--GEDHKLKGMLTDRDIVVKVLAEGKDPVAV 68
Query: 130 KVGDIMTEEV 139
VG++ +EV
Sbjct: 69 HVGELPRDEV 78
>gi|393769455|ref|ZP_10357977.1| signal-transduction protein [Methylobacterium sp. GXF4]
gi|392724926|gb|EIZ82269.1| signal-transduction protein [Methylobacterium sp. GXF4]
Length = 143
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + + D T+ + ++ + + +GALVV SVAGII+ERD
Sbjct: 2 TVARILAEKGS----SVVTVSPDKTLEEVIQILAEKRIGALVVAHA--DGSVAGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G ++ V D MT +V
Sbjct: 56 IMRALARHGGATFDAPVSDHMTADV 80
>gi|237746602|ref|ZP_04577082.1| CBS domain-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377953|gb|EEO28044.1| CBS domain-containing protein [Oxalobacter formigenes HOxBLS]
Length = 150
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQ 122
G + + C+++ TV +A + M +++VG L+VV+ V GI+T+RD + ++ +
Sbjct: 4 GHICSNNVITCSSNTTVLEAAQLMRRNHVGTLIVVEEVNGMMVPQGIVTDRDIVVVVLAE 63
Query: 123 GRSSKSTKVGDIMTEEV 139
G KS KV DIM E+
Sbjct: 64 GLDPKSIKVIDIMKVEL 80
>gi|365900975|ref|ZP_09438834.1| CBS domain containing protein [Bradyrhizobium sp. STM 3843]
gi|365418324|emb|CCE11376.1| CBS domain containing protein [Bradyrhizobium sp. STM 3843]
Length = 144
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT DDT+ DA ++M ++G L V + + G+I++RD + + GR + TK+ +
Sbjct: 14 CTPDDTLKDAAEAMAALDIGLLPVT---DHDRLVGMISDRDIAVRAVAAGRGPE-TKIRE 69
Query: 134 IMTEEV 139
IMT EV
Sbjct: 70 IMTPEV 75
>gi|443632839|ref|ZP_21117018.1| putative oxidoreductase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347662|gb|ELS61720.1| putative oxidoreductase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 148
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M NVGA+ +V + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDANVGAIPIVDE-DGETLVGIVTDR 53
Query: 114 DY-LRKIIVQGRSSKSTKVGDIMTEE 138
D LR I + + S K+ D MTE+
Sbjct: 54 DLVLRGIAI--KKPNSQKITDAMTEK 77
>gi|160932207|ref|ZP_02079598.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
gi|156868809|gb|EDO62181.1| CBS domain protein [Clostridium leptum DSM 753]
Length = 149
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++D++ K + DT+ +A + M +H+VG L VV GE K G++T+RD
Sbjct: 4 TVNDVMSKK-------VVAVLPGDTLEEAARLMKEHDVGVLPVVSGGELK---GLVTDRD 53
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+ + + G+ K IMT++V
Sbjct: 54 IVLQCVAAGKEPSQVKAYQIMTKDV 78
>gi|14520462|ref|NP_125937.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
GE5]
gi|5457677|emb|CAB49168.1| Small intracellular module of unknown function,containing CBS
domains [Pyrococcus abyssi GE5]
gi|380740986|tpe|CCE69620.1| TPA: inosine-5'-monophosphate dehydrogenase related [Pyrococcus
abyssi GE5]
Length = 179
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V+ + ++++ VG+ VV+ ++ V GI+TERD L K++ +G+ K KV +IMT+
Sbjct: 22 DSVHRVARILSKNKVGSAVVM---DKDEVLGIVTERDILDKVVAKGKDPKEVKVEEIMTK 78
>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 142
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
M + +GA++V+ E + GI++ERDY RK++++ RSS +T V IM+ EV
Sbjct: 31 MAEKAIGAVLVM---EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGEV 80
>gi|312136466|ref|YP_004003803.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224185|gb|ADP77041.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 312
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T D++ DAV+ M +H+VGAL VV + V GI++ERD++ ++ G ++ V
Sbjct: 120 YITNKDSIKDAVEKMLKHDVGALPVVD--NENRVVGIVSERDFV--FLMAGLINEEP-VA 174
Query: 133 DIMTE 137
D MTE
Sbjct: 175 DYMTE 179
>gi|308808997|ref|XP_003081808.1| unnamed protein product [Ostreococcus tauri]
gi|116060275|emb|CAL55611.1| unnamed protein product [Ostreococcus tauri]
Length = 258
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 22/107 (20%)
Query: 51 FESTTISDILKA-KGKG-ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK--------- 99
+ + +SDIL A GK A G W + V +AV+ M ++GALVV+
Sbjct: 65 YNCSRVSDILNATSGKHRAFGKSHWIDGEARVSEAVRQMHATDLGALVVMDRIALDADAT 124
Query: 100 ----------PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
E ++ GI TERDYL + +G S TKV +IMT
Sbjct: 125 GVISDEELALSAENDAIIGIFTERDYL-NAVAKGVISPKTKVSEIMT 170
>gi|308173460|ref|YP_003920165.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384159523|ref|YP_005541596.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384164040|ref|YP_005545419.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384168574|ref|YP_005549952.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307606324|emb|CBI42695.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328553611|gb|AEB24103.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328911595|gb|AEB63191.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341827853|gb|AEK89104.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 147
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D VY+A M +VGA+ +V + +++ GI+T+RD + + I R + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGETLVGIVTDRDLVLRGIASKRPN-SQKIT 71
Query: 133 DIMTEEV 139
D MTE V
Sbjct: 72 DAMTERV 78
>gi|407773810|ref|ZP_11121110.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
gi|407283256|gb|EKF08797.1| hypothetical protein TH2_07911 [Thalassospira profundimaris WP0211]
Length = 149
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D+V DAV M + +GA+++V +AGI TERD + +++ +G + S + +MT
Sbjct: 22 DSVMDAVTMMAERKIGAVIIVD--NNARLAGIFTERDLVNRVVAKGLDAASVPLSKVMTA 79
Query: 138 E 138
+
Sbjct: 80 D 80
>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 144
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S I D++K + S + TV +A + M + +GA+V+V G+ + GI TE
Sbjct: 3 SRLIKDVIKNQ------SIVALPHTATVREAAQEMAKRRIGAIVIVDDGK---LMGIFTE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RD L +++ +GR ++T + +MT
Sbjct: 54 RDGLFRVLAEGRDPENTTLDQVMT 77
>gi|308172910|ref|YP_003919615.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|384158462|ref|YP_005540535.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|384163395|ref|YP_005544774.1| oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|384167511|ref|YP_005548889.1| oxidoreductase [Bacillus amyloliquefaciens XH7]
gi|307605774|emb|CBI42145.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
gi|328552550|gb|AEB23042.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
gi|328910950|gb|AEB62546.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
gi|341826790|gb|AEK88041.1| putative oxidoreductase [Bacillus amyloliquefaciens XH7]
Length = 140
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEEV 139
+M+ +V
Sbjct: 71 VMSSKV 76
>gi|357385164|ref|YP_004899888.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
gi|351593801|gb|AEQ52138.1| inosine-5'-monophosphate dehydrogenase [Pelagibacterium
halotolerans B2]
Length = 141
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
KG+D + +D T+ D + ++ +HN+GA+VVV G+ V GII+ERD +R +
Sbjct: 10 KGSD--VVTVRSDSTIGDLIATLARHNIGAVVVVDNGK---VEGIISERDIVRHLAGSAE 64
Query: 125 SSKSTKVGDIMT 136
++ V +MT
Sbjct: 65 GFRAKPVSTLMT 76
>gi|431930674|ref|YP_007243720.1| signal transduction protein [Thioflavicoccus mobilis 8321]
gi|431828977|gb|AGA90090.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thioflavicoccus mobilis 8321]
Length = 621
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 69 GSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
G+ + T + T+ +A + MT+H V ++V++ G++ +AGIIT+RD + + G S +
Sbjct: 162 GTLIKATPETTIQEAARIMTEHRVSSIVIMN-GDR--LAGIITDRDLRSRCLAAGLSRQR 218
Query: 129 TKVGDIMTEEV 139
T V +IMT E+
Sbjct: 219 T-VSEIMTTEI 228
>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
Length = 222
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
F + +IL+ K D + + + +A++ M +G+++VV + + GI
Sbjct: 61 FGDKKVGEILEKK---KDNEIVTVGEHELIINAIRKMVDKKIGSILVV--NSENKLKGIF 115
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ERDYL K+ + G SS+ + V +MT+ V
Sbjct: 116 SERDYLSKVNLAGLSSRESPVEQVMTKNV 144
>gi|375145476|ref|YP_005007917.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361059522|gb|AEV98513.1| CBS domain containing protein [Niastella koreensis GR20-10]
Length = 152
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D++ +K + + D V DA+ + Q N+ L+V+ K G+ +E+D
Sbjct: 3 TVDDLIASKPRPEN----IIKPDALVIDALHLLEQVNLSYLIVMDGDAYK---GVFSEKD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
Y R ++++GRSSK V ++MT ++
Sbjct: 56 YSRNVVLKGRSSKEAHVQEVMTTDL 80
>gi|114707952|ref|ZP_01440844.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
gi|114536581|gb|EAU39713.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Fulvimarina pelagi HTCC2506]
Length = 607
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C DDTV +A + M +H + +L + + G+ + GI+T RD K++ +G S +T V D
Sbjct: 155 CAPDDTVQEAARRMRKHGISSLCMTEHGK---LTGIVTMRDLSGKVVAEGLSP-ATPVSD 210
Query: 134 IMT 136
I+T
Sbjct: 211 IVT 213
>gi|312795956|ref|YP_004028878.1| hypothetical protein RBRH_02954 [Burkholderia rhizoxinica HKI 454]
gi|312167731|emb|CBW74734.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
Length = 196
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDT-VYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
E+ +SDILK KG L+ T DT + +AV++M +H++G+LVV++ G+ + G++
Sbjct: 43 EAMRVSDILKVKGNA-----LYTVTPDTPLSEAVQTMAEHDIGSLVVIEFGD---LVGML 94
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTE 137
T R+ + + +G S + + +M +
Sbjct: 95 TFREIILTLRDRGGSVDAVTIRKVMDD 121
>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
Length = 177
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D V DA+ + +GAL V++ G VAGI +ERD + ++ +G + S ++G++
Sbjct: 53 TVDQPVSDAITLLASKRIGALPVMEEGR---VAGIFSERDVIYRLAHEGETCLSRRIGEV 109
Query: 135 MT 136
MT
Sbjct: 110 MT 111
>gi|186476329|ref|YP_001857799.1| CBS domain-containing protein [Burkholderia phymatum STM815]
gi|184192788|gb|ACC70753.1| CBS domain containing protein [Burkholderia phymatum STM815]
Length = 165
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 13 VSDILKVKG----NTLFTVTPDTEVNEAVTTMAEHDIGSLVVMEYGD---LVGMLTFREI 65
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ST + IM +
Sbjct: 66 ILVLSRNGGSVGSTTIRKIMDD 87
>gi|375083205|ref|ZP_09730235.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
gi|374742159|gb|EHR78567.1| hypothetical protein OCC_11512 [Thermococcus litoralis DSM 5473]
Length = 136
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV +A K M ++G+LVV+ E+ +V G T+ D +R++IV G +T V +IMT
Sbjct: 21 EDTVQEACKVMVDFDIGSLVVI--DEKDNVVGFFTKSDIIRRVIVPGLPY-TTPVKEIMT 77
Query: 137 EEV 139
+++
Sbjct: 78 KDL 80
>gi|357413771|ref|YP_004925507.1| signal transduction protein with CBS domains [Streptomyces
flavogriseus ATCC 33331]
gi|320011140|gb|ADW05990.1| putative signal transduction protein with CBS domains [Streptomyces
flavogriseus ATCC 33331]
Length = 141
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W +T+ A + M H VGAL V GE+ + GIIT+RD + K + G + G
Sbjct: 14 WIPAHETLDRAAQMMRDHTVGALPVSAGGEKDRMVGIITDRDIVTKCVASGHDPSTVTAG 73
Query: 133 DI 134
++
Sbjct: 74 EL 75
>gi|390570530|ref|ZP_10250793.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
gi|389937426|gb|EIM99291.1| hypothetical protein WQE_19334 [Burkholderia terrae BS001]
Length = 155
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A+ M +V ++V+ + ++ GI+++RDY RK+ + GRS+ T V DIMT
Sbjct: 26 DAVLKALHLMADEDVTTVLVL---QGSNLVGILSQRDYARKVELAGRSAAGTTVADIMTT 82
Query: 138 EV 139
+V
Sbjct: 83 QV 84
>gi|375094239|ref|ZP_09740504.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
gi|374654972|gb|EHR49805.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora marina XMU15]
Length = 127
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST + DI+ + K + T + V + + M + NVGAL V GE + GI+T+
Sbjct: 4 STKVRDIMTSDPK-------FVDTSEAVSEVARIMARSNVGALPVR--GEDNRLKGIVTD 54
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD + K++ +G+ + VG+++ E+
Sbjct: 55 RDIVVKVLAEGKDPMAVHVGELVEGEL 81
>gi|387816426|ref|YP_005676770.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
Length = 138
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + + V G+IT+RD + + +G S + KVGDIMT
Sbjct: 17 NDSVEKAAQLMSEHNVGSIPIC---DNNKVVGVITDRDIALRSVAKG-SDNNIKVGDIMT 72
>gi|148378202|ref|YP_001252743.1| hypothetical protein CBO0199 [Clostridium botulinum A str. ATCC
3502]
gi|153930979|ref|YP_001382603.1| hypothetical protein CLB_0240 [Clostridium botulinum A str. ATCC
19397]
gi|153936233|ref|YP_001386155.1| hypothetical protein CLC_0255 [Clostridium botulinum A str. Hall]
gi|153940514|ref|YP_001389562.1| hypothetical protein CLI_0264 [Clostridium botulinum F str.
Langeland]
gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|170756627|ref|YP_001779830.1| hypothetical protein CLD_0576 [Clostridium botulinum B1 str. Okra]
gi|226947420|ref|YP_002802511.1| CBS domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384460642|ref|YP_005673237.1| hypothetical protein CBF_0232 [Clostridium botulinum F str. 230613]
gi|421838951|ref|ZP_16272654.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|429243973|ref|ZP_19207455.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
3502]
gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
gi|409736556|gb|EKN37942.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|428758893|gb|EKX81284.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
Length = 138
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + + V G+IT+RD + + +G S + KVGDIMT
Sbjct: 17 NDSVEKAAQLMSEHNVGSIPIC---DNNKVVGVITDRDIALRSVAKG-SDNNIKVGDIMT 72
>gi|392381931|ref|YP_005031128.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
gi|356876896|emb|CCC97689.1| conserved hypothetical protein with 2 CBS domains [Azospirillum
brasilense Sp245]
Length = 145
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T +S++L KG S L +++ A +++T +GALVV + +AGI++ER
Sbjct: 2 TVVSEVLNRKGHNV-ASIL---PSESIRTAARTLTDRRIGALVVCD--RRGRLAGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D +R + + G + V D+MT +V
Sbjct: 56 DIVRAVAMHGADALDMPVEDLMTRQV 81
>gi|444425483|ref|ZP_21220922.1| hypothetical protein B878_06053 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241214|gb|ELU52741.1| hypothetical protein B878_06053 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 629
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKST 129
D T+ +A + M Q NV +L++V P Q V GIIT+RD +++ +G S
Sbjct: 166 DQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDLCTRVLAEGLSPLD- 224
Query: 130 KVGDIMTEEV 139
+V +MT EV
Sbjct: 225 EVSTVMTTEV 234
>gi|428278432|ref|YP_005560167.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
gi|291483389|dbj|BAI84464.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
BEST195]
Length = 140
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDITLRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EEV 139
E+
Sbjct: 74 TEL 76
>gi|227832961|ref|YP_002834668.1| signal-transduction protein [Corynebacterium aurimucosum ATCC
700975]
gi|262182552|ref|ZP_06041973.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
gi|227453977|gb|ACP32730.1| putative signal-transduction protein [Corynebacterium aurimucosum
ATCC 700975]
Length = 622
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQ--KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
T+ +A MT+H V +L+VV+ GE+ K + GI+T+RD LR ++ + + VG+IMT
Sbjct: 169 TIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRD-LRTRVLAAQRDPAAPVGEIMT 227
Query: 137 EE 138
+
Sbjct: 228 PQ 229
>gi|449018296|dbj|BAM81698.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 260
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA----GIITERDYLRKIIVQGRSSKST 129
+DT+ +A+K M HN+G L+VV+ +Q A GII+ERD R +I +G S ++
Sbjct: 116 NDTMQNALKKMFIHNIGCLLVVEQPQQNDEACKPVGIISERDLTRLLISRGSSGAAS 172
>gi|16077988|ref|NP_388804.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308762|ref|ZP_03590609.1| hypothetical protein Bsubs1_05098 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313084|ref|ZP_03594889.1| hypothetical protein BsubsN3_05039 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318010|ref|ZP_03599304.1| hypothetical protein BsubsJ_04983 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322284|ref|ZP_03603578.1| hypothetical protein BsubsS_05084 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314647|ref|YP_004206934.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|384174609|ref|YP_005555994.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|452914486|ref|ZP_21963113.1| CBS domain protein [Bacillus subtilis MB73/2]
gi|1724016|sp|P54606.1|YHCV_BACSU RecName: Full=CBS domain-containing protein YhcV
gi|1239998|emb|CAA65706.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633246|emb|CAB12751.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
168]
gi|320020921|gb|ADV95907.1| putative oxidoreductase [Bacillus subtilis BSn5]
gi|349593833|gb|AEP90020.1| CBS domain pair family protein [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|407956603|dbj|BAM49843.1| oxidoreductase [Bacillus subtilis BEST7613]
gi|407963873|dbj|BAM57112.1| oxidoreductase [Bacillus subtilis BEST7003]
gi|452116906|gb|EME07301.1| CBS domain protein [Bacillus subtilis MB73/2]
Length = 140
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ E+
Sbjct: 71 VMSTEL 76
>gi|420249469|ref|ZP_14752713.1| CBS-domain-containing membrane protein [Burkholderia sp. BT03]
gi|398063873|gb|EJL55581.1| CBS-domain-containing membrane protein [Burkholderia sp. BT03]
Length = 155
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A+ M +V ++V+ + ++ GI+++RDY RK+ + GRS+ T V DIMT
Sbjct: 26 DAVLTALHLMADEDVTTVLVL---QGSNLVGILSQRDYARKVELAGRSAAGTTVADIMTT 82
Query: 138 EV 139
+V
Sbjct: 83 QV 84
>gi|402775147|ref|YP_006629091.1| oxidoreductase [Bacillus subtilis QB928]
gi|418033987|ref|ZP_12672464.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|430759296|ref|YP_007210374.1| hypothetical protein A7A1_3804 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449093627|ref|YP_007426118.1| putative oxidoreductase [Bacillus subtilis XF-1]
gi|351470135|gb|EHA30311.1| hypothetical protein BSSC8_34080 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480331|gb|AFQ56840.1| Putative oxidoreductase [Bacillus subtilis QB928]
gi|430023816|gb|AGA24422.1| Hypothetical protein YhcV [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449027542|gb|AGE62781.1| putative oxidoreductase [Bacillus subtilis XF-1]
Length = 146
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 24 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 79
Query: 137 EEV 139
E+
Sbjct: 80 TEL 82
>gi|408402757|ref|YP_006860740.1| signal transduction protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408363353|gb|AFU57083.1| putative signal transduction protein with CBS domains [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 148
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+ D K M ++ VG+ VV+ G+++ V GIITERD LRK+ + +KS DIM+
Sbjct: 24 SALDMAKLMIKNKVGS-VVLMDGDERPV-GIITERDILRKVAASNKPAKSIAAKDIMSSP 81
Query: 139 V 139
V
Sbjct: 82 V 82
>gi|387897428|ref|YP_006327724.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387171538|gb|AFJ60999.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 129
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 4 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 59
Query: 134 IMTEEV 139
+M+ V
Sbjct: 60 VMSSAV 65
>gi|254419222|ref|ZP_05032946.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
gi|196185399|gb|EDX80375.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
Length = 142
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG + +D TV A + + VGALVV + GE SVAG+ +ERD
Sbjct: 3 VAEILKTKGN----AVFSIASDLTVAQACGELERKRVGALVV-RDGE--SVAGVFSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
++ + V G ++ V D M+ V
Sbjct: 56 VKALAVDGPNALGRPVSDYMSARV 79
>gi|334337368|ref|YP_004542520.1| signal transduction protein with CBS domains [Isoptericola
variabilis 225]
gi|334107736|gb|AEG44626.1| putative signal transduction protein with CBS domains [Isoptericola
variabilis 225]
Length = 147
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ D L+ KG + + D TV D + + +H +GA+VV G SV GI++ERD
Sbjct: 3 VRDTLRHKGD----AVVTVARDRTVRDLLALLAEHGIGAVVVSDDG--ASVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G V IMT +V
Sbjct: 57 VRRLHAEGVGVLDAAVEQIMTRDV 80
>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
gi|170761474|ref|YP_001785527.1| hypothetical protein CLK_3378 [Clostridium botulinum A3 str. Loch
Maree]
gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
Length = 138
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M++HNVG++ + + V G+IT+RD + + +G S + KVGDIMT
Sbjct: 17 NDSVEKAAELMSEHNVGSIPIC---DNNKVVGVITDRDIALRSVAKG-SDNNIKVGDIMT 72
>gi|357038520|ref|ZP_09100317.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Desulfotomaculum gibsoniae DSM
7213]
gi|355359312|gb|EHG07074.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Desulfotomaculum gibsoniae DSM
7213]
Length = 645
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQG 123
C D+TV+ ++M H + ++++V G+ + + G++TERD +R+++VQG
Sbjct: 180 CKADETVHSVAQTMKDHGISSVIIVD-GDNRPI-GLLTERDLVRRVLVQG 227
>gi|352682306|ref|YP_004892830.1| hypothetical protein TTX_1109 [Thermoproteus tenax Kra 1]
gi|350275105|emb|CCC81752.1| CBS domain [Thermoproteus tenax Kra 1]
Length = 136
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L D T+ +AV + +HNVGALVVV+ E +++ERD +R + R + ST V
Sbjct: 12 LVIHPDSTLLEAVDRLMEHNVGALVVVRREEPDKAVAVLSERDIVRAL--NMRMALSTPV 69
Query: 132 GDIMT 136
M+
Sbjct: 70 EAFMS 74
>gi|297624020|ref|YP_003705454.1| putative signal transduction protein [Truepera radiovictrix DSM
17093]
gi|297165200|gb|ADI14911.1| putative signal transduction protein with CBS domains [Truepera
radiovictrix DSM 17093]
Length = 138
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V +A + + NVG LVVV+ G+ GI+T+RD +++ GR K+T V ++MT
Sbjct: 19 SVLEAAELLRARNVGCLVVVEGGKP---CGILTDRDIALRVVAAGRDPKTTAVEEVMT 73
>gi|452965016|gb|EME70046.1| CBS domain-containing protein [Magnetospirillum sp. SO-1]
Length = 146
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
ILK+K +GA + D +V DA + + H +GA++V+ G++ VAGI++ERD +R
Sbjct: 6 ILKSKARGA--GIISVPPDASVGDAARLLATHKIGAVLVMN-GDR--VAGILSERDIVRG 60
Query: 119 IIVQGRSSKSTKVGDIMTEEV 139
+ + +V D+MT EV
Sbjct: 61 LADAVDVCITARVKDLMTAEV 81
>gi|154685383|ref|YP_001420544.1| hypothetical protein RBAM_009490 [Bacillus amyloliquefaciens FZB42]
gi|384264485|ref|YP_005420192.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|394992297|ref|ZP_10385083.1| YhcV [Bacillus sp. 916]
gi|429504420|ref|YP_007185604.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|154351234|gb|ABS73313.1| YhcV [Bacillus amyloliquefaciens FZB42]
gi|380497838|emb|CCG48876.1| YhcV [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|393806874|gb|EJD68207.1| YhcV [Bacillus sp. 916]
gi|429486010|gb|AFZ89934.1| protein YhcV [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 140
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEEV 139
+M+ V
Sbjct: 71 VMSSAV 76
>gi|254453578|ref|ZP_05067015.1| CBS domain protein [Octadecabacter arcticus 238]
gi|198267984|gb|EDY92254.1| CBS domain protein [Octadecabacter arcticus 238]
Length = 145
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK+K A G T+ V DA M+ +G +V+ G + AGI++ERD
Sbjct: 3 VSQILKSK---ATGGVFTLTSYANVADAAAIMSDMRIGTIVISDDG-GATPAGILSERDI 58
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ QG S S V D+MT ++
Sbjct: 59 VRELGKQGPSCMSRLVSDMMTSKL 82
>gi|124248201|emb|CAL26197.1| conserved hypothetical protein YhcV [Bacillus amyloliquefaciens
FZB42]
Length = 156
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V +
Sbjct: 32 SPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSHV 87
Query: 135 MTEEV 139
M+ V
Sbjct: 88 MSSAV 92
>gi|383828361|ref|ZP_09983450.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
gi|383461014|gb|EID53104.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora xinjiangensis XJ-54]
Length = 138
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + DI+ A + T +TV A ++M H++GAL + GE G++T+R
Sbjct: 2 TRVRDIMTA-------DPTYAETSETVSRAARTMASHDIGALPIR--GEDHHFKGMLTDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + K++ +G+ + VG++
Sbjct: 53 DIVVKVLAEGKDPAALHVGEL 73
>gi|388456933|ref|ZP_10139228.1| hypothetical protein FdumT_10182 [Fluoribacter dumoffii Tex-KL]
Length = 146
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD V ++ MT++++GALVV+ Q + GI++ERD +R + + ++ KVGD++
Sbjct: 22 DDPVKKSIDMMTEYDIGALVVMDNENQ--LVGIVSERDIVRSCLHKCIDLETAKVGDVVN 79
Query: 137 EEV 139
++V
Sbjct: 80 KDV 82
>gi|259418480|ref|ZP_05742398.1| CBS domain protein [Silicibacter sp. TrichCH4B]
gi|259345875|gb|EEW57719.1| CBS domain protein [Silicibacter sp. TrichCH4B]
Length = 174
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L K G W DTV AV+ + +GAL+V P Q + GI++ERD
Sbjct: 34 TVGDVLANKS----GDLFWINPQDTVAKAVEVLRDKGIGALLVKNP--QGELVGILSERD 87
Query: 115 YLRKI 119
+R++
Sbjct: 88 IVRRL 92
>gi|398310597|ref|ZP_10514071.1| putative oxidoreductase [Bacillus mojavensis RO-H-1]
Length = 148
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D++ A +CT D VY+A M +VGA+ VV + +++ GI+T+R
Sbjct: 2 TKIKDLMTA-------DLQYCTVLDNVYEAAVKMKDADVGAIPVVDE-DGETLVGIVTDR 53
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEE 138
D + + I R + S K+ D MTE+
Sbjct: 54 DLVLRGIASKRPN-SQKITDAMTEK 77
>gi|161524964|ref|YP_001579976.1| XRE family transcriptional regulator [Burkholderia multivorans ATCC
17616]
gi|189350289|ref|YP_001945917.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221197721|ref|ZP_03570767.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|221204721|ref|ZP_03577738.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221214916|ref|ZP_03587884.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|421467912|ref|ZP_15916493.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
gi|421475871|ref|ZP_15923803.1| CBS domain protein [Burkholderia multivorans CF2]
gi|160342393|gb|ABX15479.1| putative transcriptional regulator, XRE family [Burkholderia
multivorans ATCC 17616]
gi|189334311|dbj|BAG43381.1| putative signal-transduction protein [Burkholderia multivorans ATCC
17616]
gi|221165143|gb|EED97621.1| CBS domain protein [Burkholderia multivorans CGD1]
gi|221175578|gb|EEE08008.1| CBS domain protein [Burkholderia multivorans CGD2]
gi|221181653|gb|EEE14054.1| CBS domain protein [Burkholderia multivorans CGD2M]
gi|400229504|gb|EJO59351.1| CBS domain protein [Burkholderia multivorans CF2]
gi|400232997|gb|EJO62579.1| CBS domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 151
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G + +V +M E +
Sbjct: 56 ILRLRENGGAIGDVQVRKVMDEPL 79
>gi|323526749|ref|YP_004228902.1| hypothetical protein BC1001_2426 [Burkholderia sp. CCGE1001]
gi|407714195|ref|YP_006834760.1| hypothetical protein BUPH_03003 [Burkholderia phenoliruptrix
BR3459a]
gi|323383751|gb|ADX55842.1| CBS domain containing protein [Burkholderia sp. CCGE1001]
gi|407236379|gb|AFT86578.1| CBS domain containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 152
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D ++DAV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKGN----TLFTVTPDTALHDAVVTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S ++ + +M +
Sbjct: 56 ILTLKENGGSVGTSTIRKVMDD 77
>gi|440792248|gb|ELR13476.1| CBS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 149
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C +D++ A K M + NVG L VV ++ GI+T+RD + + I +G K+
Sbjct: 17 CCKENDSILQAAKLMKEQNVGVLPVVDNNQKP--CGIVTDRDIVLRCIGEGHDYNQCKMK 74
Query: 133 DIMTEEV 139
D++++ V
Sbjct: 75 DVLSKNV 81
>gi|110634385|ref|YP_674593.1| hypothetical protein Meso_2035 [Chelativorans sp. BNC1]
gi|110285369|gb|ABG63428.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
Length = 143
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +A + M + NVGAL V GE + G++T+RD + + + RS+ +T V ++M+E
Sbjct: 19 TIREAARKMREDNVGALPV---GENDRLIGMVTDRDITVRAVAEERSAGNTSVREVMSER 75
Query: 139 V 139
V
Sbjct: 76 V 76
>gi|194014891|ref|ZP_03053508.1| YlbB [Bacillus pumilus ATCC 7061]
gi|194013917|gb|EDW23482.1| YlbB [Bacillus pumilus ATCC 7061]
Length = 149
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 51 FESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGII 110
++ I DI+ K + C DD Y+A M + ++GA+ VV G+Q + GI+
Sbjct: 1 MKTKKIKDIMTKK-------VVTCQQDDNTYEAAVKMREADIGAIPVVN-GDQ--LVGIV 50
Query: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
T+RD + + I + + S +VG +MT+EV
Sbjct: 51 TDRDLVLRGIAE-KKPNSQEVGSLMTKEV 78
>gi|366164213|ref|ZP_09463968.1| signal-transduction protein [Acetivibrio cellulolyticus CD2]
Length = 139
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ +TV +A + M + NVG++ V +Q V G++T+RD + + + G+ + TKV
Sbjct: 13 YVNPSNTVVEAAQLMQKLNVGSVPVF---DQNKVVGVVTDRDIVVRNVAHGKIPQDTKVQ 69
Query: 133 DIMTEEV 139
D+MT +V
Sbjct: 70 DVMTSQV 76
>gi|403380207|ref|ZP_10922264.1| CBS domain-containing protein [Paenibacillus sp. JC66]
Length = 143
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ +D+V A + M + G+L + E K+V GIIT+RD + ++ G+ S S
Sbjct: 14 FCSPNDSVATAAQKMRNIDCGSLPIC---EGKTVVGIITDRDIVLNVVADGKDSTSVTCQ 70
Query: 133 DIMTEEV 139
+ MT V
Sbjct: 71 ECMTTSV 77
>gi|345862311|ref|ZP_08814540.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
gi|344324598|gb|EGW36147.1| CBS domain pair family protein [Desulfosporosinus sp. OT]
Length = 141
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W T D ++ + + M + +VG++ + K E + GIIT+RD + ++ G +KST
Sbjct: 13 WVTPDASIVEVARLMKKDDVGSIPICKGNE---LVGIITDRDIVLNVVATGGDTKSTSAK 69
Query: 133 DIMTEEV 139
DIM+ +
Sbjct: 70 DIMSTNI 76
>gi|83719350|ref|YP_443131.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|167582140|ref|ZP_02375014.1| CBS domain protein [Burkholderia thailandensis TXDOH]
gi|167620299|ref|ZP_02388930.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257139361|ref|ZP_05587623.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83653175|gb|ABC37238.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 154
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G S VGD++ V
Sbjct: 56 ILRLKANGGS-----VGDVLVRTV 74
>gi|414153969|ref|ZP_11410290.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411454501|emb|CCO08194.1| CBS domain-containing protein yhcV [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 144
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV +A + M+Q+NVG++ VV G GI+T+RD + + QG + +TKV +MT
Sbjct: 21 TVQEAAQLMSQYNVGSVPVVDNGR---CVGIVTDRDIALRAVSQGHNPSTTKVQTVMTAG 77
Query: 139 V 139
V
Sbjct: 78 V 78
>gi|385264036|ref|ZP_10042123.1| CBS domain-containing protein [Bacillus sp. 5B6]
gi|385148532|gb|EIF12469.1| CBS domain-containing protein [Bacillus sp. 5B6]
Length = 140
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV GE K G++T+RD + QGR + T V
Sbjct: 15 VSPNQTIQEAAALMHQHNVGAIPVVDGGELK---GMLTDRDIALRTTAQGRDGQ-TPVSH 70
Query: 134 IMTEEV 139
+M+ V
Sbjct: 71 VMSSTV 76
>gi|408404657|ref|YP_006862640.1| CBS domain-containing protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408365253|gb|AFU58983.1| putative CBS domain protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 147
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DA K M ++ VG++VVV E+K V GI+TERD L+K+ +S + V DIM+
Sbjct: 26 DAAKLMVKNKVGSVVVVD-FEEKPV-GIVTERDILKKVTALNKSPREIAVQDIMS 78
>gi|404441664|ref|ZP_11006848.1| signal-transduction protein [Mycobacterium vaccae ATCC 25954]
gi|403658257|gb|EJZ13000.1| signal-transduction protein [Mycobacterium vaccae ATCC 25954]
Length = 142
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRNKG----AAVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+RK+ G V +IMT V
Sbjct: 56 VRKLHDVGADLLRRPVSEIMTTLV 79
>gi|433648777|ref|YP_007293779.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
gi|433298554|gb|AGB24374.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium smegmatis JS623]
Length = 143
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + T + +V + +T HN+GA+VV+ Q + GI++ERD
Sbjct: 3 IADVLRNKG----AAVATITPETSVAGLLTELTVHNIGAMVVMS---QDGLVGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+RK+ G V +IMT
Sbjct: 56 VRKLHELGTEILHRPVSEIMT 76
>gi|333924636|ref|YP_004498216.1| hypothetical protein Desca_2477 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750197|gb|AEF95304.1| CBS domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 145
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS 75
>gi|323701536|ref|ZP_08113209.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323533545|gb|EGB23411.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 145
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V +A + M+Q+NVGA+ VV E GI+T+RD + + QG++ +ST V +M+
Sbjct: 21 SVQEAAQLMSQNNVGAIPVV---ENSKCVGIVTDRDIALRAVSQGQNPQSTTVQSVMS 75
>gi|327310289|ref|YP_004337186.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326946768|gb|AEA11874.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 140
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
TV A ++M +NVG LV+V P E K G+I+ERD +R I
Sbjct: 19 TVEQAAEAMANNNVGLLVIVDPKEPKKPIGVISERDIIRTI 59
>gi|189500245|ref|YP_001959715.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Chlorobium phaeobacteroides BS1]
gi|189495686|gb|ACE04234.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chlorobium phaeobacteroides BS1]
Length = 650
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 41 VSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP 100
V R E + + ++ L+ K S + C D ++ +A K M+ ++G+++VV
Sbjct: 153 VGQKRYSEQSYNNFLQNETLEVKPVT---SVITCPPDISIQEAAKIMSDSHIGSIIVV-- 207
Query: 101 GEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ GIIT+ D RK++ Q S K VG IM+ V
Sbjct: 208 SSENHPLGIITDTDLTRKVVAQPGSVKDQAVGTIMSTPV 246
>gi|377820430|ref|YP_004976801.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
gi|357935265|gb|AET88824.1| hypothetical protein BYI23_A009860 [Burkholderia sp. YI23]
Length = 150
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D V DAV +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPVSDAVDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G + +T + IM +
Sbjct: 56 ILTLHNNGGAVGTTTIRKIMDD 77
>gi|167562988|ref|ZP_02355904.1| CBS domain protein [Burkholderia oklahomensis EO147]
gi|167570179|ref|ZP_02363053.1| CBS domain protein [Burkholderia oklahomensis C6786]
Length = 154
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDMPLRNAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G S V +M E +
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEPL 79
>gi|374335199|ref|YP_005091886.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
gi|372984886|gb|AEY01136.1| hypothetical protein GU3_06900 [Oceanimonas sp. GK1]
Length = 623
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGE--QKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+V+DA + MT V +++V+K G ++ VAGIIT+RD LR ++ + +T V ++M+
Sbjct: 168 SVFDAARKMTDEGVSSILVLKEGSDAEQEVAGIITDRD-LRTRVLAEQLPSATPVSEVMS 226
Query: 137 EEV 139
++
Sbjct: 227 TDL 229
>gi|422647303|ref|ZP_16710432.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330960846|gb|EGH61106.1| CBS domain-containing protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 146
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D V +A++ M + N+GAL VVK V G+++ERDY RK++++GRSS T V +IM+
Sbjct: 24 DQMVLEALRLMAEKNIGALPVVK---DGVVVGVVSERDYARKMVLKGRSSVGTPVSEIMS 80
Query: 137 EEV 139
+V
Sbjct: 81 SKV 83
>gi|237748733|ref|ZP_04579213.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
gi|229380095|gb|EEO30186.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
Length = 150
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQ 122
G + + C ++ TV +A + M +++VG L+VV+ V GI+T+RD + ++ +
Sbjct: 4 GHICSNNVVTCISNTTVLEAAQLMRRNHVGTLIVVEEVNGMLVPQGIVTDRDIVVVVLAE 63
Query: 123 GRSSKSTKVGDIMTEEV 139
G KS KV DIM E+
Sbjct: 64 GLDPKSIKVIDIMKVEL 80
>gi|120404861|ref|YP_954690.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
gi|119957679|gb|ABM14684.1| putative signal-transduction protein with CBS domains
[Mycobacterium vanbaalenii PYR-1]
Length = 142
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + T + +V + ++ HN+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRNKG----ATVATITPETSVAGLLTELSVHNIGAMVVVSP---DGLLGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+RK+ G V +IM+
Sbjct: 56 VRKLHDMGADLLRRPVSEIMS 76
>gi|423093305|ref|ZP_17081101.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase domain protein [Pseudomonas
fluorescens Q2-87]
gi|397882646|gb|EJK99133.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase domain protein [Pseudomonas
fluorescens Q2-87]
Length = 644
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ + + +AVK M + VG++VVV EQK+ GI T RD LR+++ G S + +
Sbjct: 190 CSPETPLREAVKLMHEQQVGSIVVVN--EQKAPVGIFTLRD-LRQVVADGSGDFSQAIAE 246
Query: 134 IMTE 137
MT+
Sbjct: 247 HMTQ 250
>gi|383778866|ref|YP_005463432.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
gi|381372098|dbj|BAL88916.1| hypothetical protein AMIS_36960 [Actinoplanes missouriensis 431]
Length = 145
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 14/84 (16%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISDIL+ KG + + V ++ + QH +GA+VV + G +V GI++ERD
Sbjct: 3 ISDILRVKGD----QVVTVPPETPVVRLLEVLAQHRIGAVVVSRDG--TTVEGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + V+G D++TE V
Sbjct: 57 VRALAVRG--------ADVLTEPV 72
>gi|218290241|ref|ZP_03494395.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|258512183|ref|YP_003185617.1| hypothetical protein Aaci_2219 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|384136051|ref|YP_005518765.1| hypothetical protein TC41_2345 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|218239716|gb|EED06907.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
LAA1]
gi|257478909|gb|ACV59228.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|339290136|gb|AEJ44246.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 145
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C+ D++ A ++M + N G++ V E + V GI+T+RD + K + QG+ +V
Sbjct: 13 CCSATDSIQKAAQAMKRENCGSIPVC---ENRRVVGIVTDRDIVLKAVAQGKC--DARVE 67
Query: 133 DIMTEEV 139
D MT+ V
Sbjct: 68 DCMTKAV 74
>gi|237800823|ref|ZP_04589284.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023680|gb|EGI03737.1| CBS domain-containing protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 146
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V +A++ M + N+GAL E V G+++ERDY RK++++GRSS T V DIM+ V
Sbjct: 27 VLEALRLMAEKNIGAL---PVVENGVVVGVVSERDYARKVVLKGRSSVGTPVSDIMSSHV 83
>gi|375103591|ref|ZP_09749852.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
gi|374664322|gb|EHR69107.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderiales bacterium JOSHI_001]
Length = 146
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D TV++A MT+ N G+++++ ++ GI+TERD + +++ + +TKV +MT
Sbjct: 21 DATVHEAACVMTRANCGSVLIIN--AASAMVGILTERDLMTRVLAKALDPATTKVSAVMT 78
Query: 137 EE 138
Sbjct: 79 PH 80
>gi|91227219|ref|ZP_01261678.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
gi|91188747|gb|EAS75035.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
Length = 629
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVV 97
E +SAR+ + E+ +D+ +K K G T+ A + M NV AL++
Sbjct: 127 EVENSARLRQAISENKDANDLTTSKVKTLLTGEAHTIDRGQTIQQAAQQMANDNVSALLI 186
Query: 98 VKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 187 VDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSSVMTTEV 234
>gi|379735358|ref|YP_005328864.1| putative CBS,Cystathionine beta-synthase [Blastococcus saxobsidens
DD2]
gi|378783165|emb|CCG02833.1| putative CBS,Cystathionine beta-synthase [Blastococcus saxobsidens
DD2]
Length = 143
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SD++ A C+ + TV +A + M ++ G L VV E + V G++T+RD
Sbjct: 3 VSDVMTAD-------PTCCSPETTVREAAELMADNDCGCLPVVD--EDRHVVGVVTDRDI 53
Query: 116 LRKIIVQGRSSKSTKVGDIMTEE 138
+ + QG+ + T V ++MT +
Sbjct: 54 TCRCVAQGKDPE-TPVAEVMTSQ 75
>gi|363421708|ref|ZP_09309792.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
gi|359734055|gb|EHK83038.1| IMP dehydrogenase [Rhodococcus pyridinivorans AK37]
Length = 143
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+DI++ KG D TV + + + N+GA+VV E K+VAGI+TERD
Sbjct: 3 IADIVRNKGSAVH----TVEPDTTVCELIGDFARFNIGAMVVC---EGKTVAGIVTERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G S + ++M+ V
Sbjct: 56 VRALHERGPSILAAPAHELMSRTV 79
>gi|269967100|ref|ZP_06181168.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269828359|gb|EEZ82625.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 629
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVV 97
E +SAR+ + E+ +D+ +K K G T+ A + M NV AL++
Sbjct: 127 EVENSARLRQAISENKDANDLTTSKVKTLLTGDAHTIDRGQTIQQAAQQMANDNVSALLI 186
Query: 98 VKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 187 VDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSSVMTTEV 234
>gi|254228135|ref|ZP_04921564.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
gi|262393912|ref|YP_003285766.1| Signal transduction protein [Vibrio sp. Ex25]
gi|451976003|ref|ZP_21927176.1| putative nucleotidyltransferase family [Vibrio alginolyticus E0666]
gi|151939208|gb|EDN58037.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
gi|262337506|gb|ACY51301.1| Signal transduction protein [Vibrio sp. Ex25]
gi|451930034|gb|EMD77755.1| putative nucleotidyltransferase family [Vibrio alginolyticus E0666]
Length = 629
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVV 97
E +SAR+ + E+ +D+ +K K G T+ A + M NV AL++
Sbjct: 127 EVENSARLRQAISENKDANDLTTSKVKTLLTGDAHTIDRGQTIQQAAQQMANDNVSALLI 186
Query: 98 VKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 187 VDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSSVMTTEV 234
>gi|336118180|ref|YP_004572949.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
gi|334685961|dbj|BAK35546.1| hypothetical protein MLP_25320 [Microlunatus phosphovorus NM-1]
Length = 142
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I +IL+ KG + + T D +V D V + +HN+GA+VV G ++ GI++ERD
Sbjct: 3 IREILQTKGS----AVITITPDASVRDLVVLLKEHNLGAVVVSTDG--AALDGIVSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + V + S V D+MT V
Sbjct: 57 VRALAVDA-AVLSASVSDVMTAGV 79
>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ M + +GA++V+ + + GI++ERDY RK++++ R+S +T V +IM+ EV
Sbjct: 29 RLMAEKGIGAVLVM---DGPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTEV 80
>gi|54024538|ref|YP_118780.1| hypothetical protein nfa25690 [Nocardia farcinica IFM 10152]
gi|54016046|dbj|BAD57416.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 144
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I++IL+ KG T TV + + +HN+GA VVV PG + ++GI++ERD
Sbjct: 3 IAEILRRKGC----EVATVTPGTTVRALLAVLAEHNIGA-VVVSPGGGR-ISGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G T V DIMT V
Sbjct: 57 VRGLHEYGAGLLDTPVSDIMTTPV 80
>gi|157692168|ref|YP_001486630.1| cystathionine beta-synthase [Bacillus pumilus SAFR-032]
gi|157680926|gb|ABV62070.1| possible cystathionine beta-synthase [Bacillus pumilus SAFR-032]
Length = 140
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C DD Y+A M ++GA+ VV G+Q + GI+T+RD + + I + + S +VG
Sbjct: 8 CQQDDNSYEAAVKMRDADIGAIPVVN-GDQ--LVGIVTDRDLVLRGIAE-KKPNSQEVGS 63
Query: 134 IMTEEV 139
IMT+EV
Sbjct: 64 IMTKEV 69
>gi|327311333|ref|YP_004338230.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947812|gb|AEA12918.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 128
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
++CTT DT+ AV M +N+GA++VV + S GI TERD L K++ +G S
Sbjct: 12 VYCTTRDTIRCAVSKMYAYNIGAVLVVD--DVGSPVGIFTERD-LVKVVAEGIS 62
>gi|298674000|ref|YP_003725750.1| putative signal transduction protein [Methanohalobium evestigatum
Z-7303]
gi|298286988|gb|ADI72954.1| putative signal transduction protein with CBS domains
[Methanohalobium evestigatum Z-7303]
Length = 353
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
+W T+D + +A + M ++NVG+L ++ G+ GIITERD+L+ I+
Sbjct: 307 VWTTSDTDLGEAARLMQENNVGSLPIIDNGQ---FIGIITERDFLKAIV 352
>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
gi|15623234|dbj|BAB67223.1| hypothetical protein STK_21190 [Sulfolobus tokodaii str. 7]
Length = 164
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M +HN+GALVV+ + + GIITERD + K++ +G+ KV D MT
Sbjct: 19 NDSVKTAAEEMKKHNLGALVVID--DNDKIVGIITERDIV-KVVAEGKL--DAKVKDYMT 73
Query: 137 EEV 139
V
Sbjct: 74 RNV 76
>gi|395646605|ref|ZP_10434465.1| putative signal transduction protein with CBS domains
[Methanofollis liminatans DSM 4140]
gi|395443345|gb|EJG08102.1| putative signal transduction protein with CBS domains
[Methanofollis liminatans DSM 4140]
Length = 140
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
VYD M + NVG++VVV E K GI+T+RD ++ GR K V +MT ++
Sbjct: 20 VYDVAGIMAEQNVGSVVVV---EDKKPVGIVTDRDITVRVTAAGRDPKGIPVRAVMTADL 76
>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 119
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+A++ M + VGA++V+ + + GI++ERDY K++++ RSS +T V +I + EV
Sbjct: 3 EAIRLMAEKAVGAVLVM---DGPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAEV 57
>gi|167836867|ref|ZP_02463750.1| CBS domain protein [Burkholderia thailandensis MSMB43]
gi|424904149|ref|ZP_18327659.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
gi|390930127|gb|EIP87529.1| hypothetical protein A33K_15550 [Burkholderia thailandensis MSMB43]
Length = 154
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G S +GD++ V
Sbjct: 56 ILRLKANGGS-----IGDVLVRTV 74
>gi|53719576|ref|YP_108562.1| hypothetical protein BPSL1964 [Burkholderia pseudomallei K96243]
gi|53725416|ref|YP_102671.1| hypothetical protein BMA0944 [Burkholderia mallei ATCC 23344]
gi|67642694|ref|ZP_00441447.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|76808985|ref|YP_333265.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
gi|121599268|ref|YP_992809.1| hypothetical protein BMASAVP1_A1478 [Burkholderia mallei SAVP1]
gi|124383341|ref|YP_001026403.1| hypothetical protein BMA10229_A0404 [Burkholderia mallei NCTC
10229]
gi|126439295|ref|YP_001058728.1| hypothetical protein BURPS668_1687 [Burkholderia pseudomallei 668]
gi|126451035|ref|YP_001080325.1| hypothetical protein BMA10247_0759 [Burkholderia mallei NCTC 10247]
gi|126454211|ref|YP_001065981.1| hypothetical protein BURPS1106A_1710 [Burkholderia pseudomallei
1106a]
gi|134282216|ref|ZP_01768921.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|167002921|ref|ZP_02268711.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|167719875|ref|ZP_02403111.1| CBS domain protein [Burkholderia pseudomallei DM98]
gi|167738877|ref|ZP_02411651.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167816100|ref|ZP_02447780.1| CBS domain protein [Burkholderia pseudomallei 91]
gi|167824472|ref|ZP_02455943.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|167846008|ref|ZP_02471516.1| CBS domain protein [Burkholderia pseudomallei B7210]
gi|167894582|ref|ZP_02481984.1| CBS domain protein [Burkholderia pseudomallei 7894]
gi|167902984|ref|ZP_02490189.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167911224|ref|ZP_02498315.1| CBS domain protein [Burkholderia pseudomallei 112]
gi|167919245|ref|ZP_02506336.1| CBS domain protein [Burkholderia pseudomallei BCC215]
gi|217423669|ref|ZP_03455170.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|226192922|ref|ZP_03788534.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237811993|ref|YP_002896444.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|242315143|ref|ZP_04814159.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|254178427|ref|ZP_04885082.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|254180023|ref|ZP_04886622.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|254188567|ref|ZP_04895078.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254197241|ref|ZP_04903663.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|254199608|ref|ZP_04905974.1| CBS domain protein [Burkholderia mallei FMH]
gi|254205926|ref|ZP_04912278.1| CBS domain protein [Burkholderia mallei JHU]
gi|254261201|ref|ZP_04952255.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|254297857|ref|ZP_04965310.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|254358673|ref|ZP_04974946.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|386861998|ref|YP_006274947.1| hypothetical protein BP1026B_I1931 [Burkholderia pseudomallei
1026b]
gi|403518411|ref|YP_006652544.1| hypothetical protein BPC006_I1757 [Burkholderia pseudomallei
BPC006]
gi|418387564|ref|ZP_12967419.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|418534145|ref|ZP_13099994.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|418541190|ref|ZP_13106687.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418547430|ref|ZP_13112589.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|418553610|ref|ZP_13118429.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|52209990|emb|CAH35963.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
gi|52428839|gb|AAU49432.1| CBS domain protein [Burkholderia mallei ATCC 23344]
gi|76578438|gb|ABA47913.1| CBS domain protein [Burkholderia pseudomallei 1710b]
gi|121228078|gb|ABM50596.1| CBS domain protein [Burkholderia mallei SAVP1]
gi|124291361|gb|ABN00630.1| CBS domain protein [Burkholderia mallei NCTC 10229]
gi|126218788|gb|ABN82294.1| CBS domain protein [Burkholderia pseudomallei 668]
gi|126227853|gb|ABN91393.1| CBS domain protein [Burkholderia pseudomallei 1106a]
gi|126243905|gb|ABO06998.1| CBS domain protein [Burkholderia mallei NCTC 10247]
gi|134246254|gb|EBA46343.1| CBS domain protein [Burkholderia pseudomallei 305]
gi|147749204|gb|EDK56278.1| CBS domain protein [Burkholderia mallei FMH]
gi|147753369|gb|EDK60434.1| CBS domain protein [Burkholderia mallei JHU]
gi|148027800|gb|EDK85821.1| CBS domain protein [Burkholderia mallei 2002721280]
gi|157807702|gb|EDO84872.1| CBS domain protein [Burkholderia pseudomallei 406e]
gi|157936246|gb|EDO91916.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|160699466|gb|EDP89436.1| CBS domain protein [Burkholderia mallei ATCC 10399]
gi|169653982|gb|EDS86675.1| CBS domain protein [Burkholderia pseudomallei S13]
gi|184210563|gb|EDU07606.1| CBS domain protein [Burkholderia pseudomallei 1655]
gi|217393527|gb|EEC33548.1| CBS domain protein [Burkholderia pseudomallei 576]
gi|225935012|gb|EEH30987.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|237503401|gb|ACQ95719.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
gi|238523883|gb|EEP87319.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
gi|242138382|gb|EES24784.1| CBS domain protein [Burkholderia pseudomallei 1106b]
gi|243061467|gb|EES43653.1| CBS domain protein [Burkholderia mallei PRL-20]
gi|254219890|gb|EET09274.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|385358699|gb|EIF64684.1| CBS domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385360004|gb|EIF65950.1| CBS domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385361215|gb|EIF67103.1| CBS domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385371448|gb|EIF76627.1| CBS domain-containing protein [Burkholderia pseudomallei 354e]
gi|385376252|gb|EIF80951.1| CBS domain-containing protein [Burkholderia pseudomallei 354a]
gi|385659126|gb|AFI66549.1| CBS domain-containing protein [Burkholderia pseudomallei 1026b]
gi|403074053|gb|AFR15633.1| CBS domain-containing protein [Burkholderia pseudomallei BPC006]
Length = 154
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + AV +M +H++G+LVV++ G+ + GI+T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLRSAVDTMAEHDIGSLVVMEYGD---LVGILTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G S V +M E +
Sbjct: 56 ILRLKANGGSIGEVLVRTVMDEPL 79
>gi|311068012|ref|YP_003972935.1| oxidoreductase [Bacillus atrophaeus 1942]
gi|419824011|ref|ZP_14347542.1| putative oxidoreductase [Bacillus atrophaeus C89]
gi|310868529|gb|ADP32004.1| putative oxidoreductase [Bacillus atrophaeus 1942]
gi|388471826|gb|EIM08618.1| putative oxidoreductase [Bacillus atrophaeus C89]
Length = 149
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D VY+A M +VGA+ VV + +++ GI+T+RD + + I R + S K+
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAVPVVDE-DGETLVGIVTDRDLVLRGIASKRPN-SQKIT 71
Query: 133 DIMTEE 138
D MT+E
Sbjct: 72 DAMTKE 77
>gi|317126018|ref|YP_004100130.1| signal transduction protein with CBS domains [Intrasporangium
calvum DSM 43043]
gi|315590106|gb|ADU49403.1| putative signal transduction protein with CBS domains
[Intrasporangium calvum DSM 43043]
Length = 143
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L+ KG + D+TV + + +H +GA VV G V GI++ERD
Sbjct: 3 ISDVLRHKGD----EVIVIAPDETVSTLLARLAEHGIGACVVSADGTH--VDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G + V IMT +V
Sbjct: 57 VRHLHTSGPTILENSVSTIMTSDV 80
>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D ++A+ + + T D+V V+ MT+ +GA+ VV G ++ GI TER
Sbjct: 4 TIIPDAIRAQ------TLVTVTPSDSVRATVRLMTERRIGAVPVV--GPDGALVGIFTER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMT 136
D + +++ + +T VG +MT
Sbjct: 56 DVMCRVVDRDLDPATTPVGQVMT 78
>gi|282163366|ref|YP_003355751.1| hypothetical protein MCP_0696 [Methanocella paludicola SANAE]
gi|282155680|dbj|BAI60768.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 138
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
DA K M NVG ++VV ++ V G++T+R + K++ + ++ K VG++MT++V
Sbjct: 22 DAAKKMKDQNVGTVLVV---DENQVKGLVTDRAIVTKVVAEQQNPKDVPVGNVMTKQV 76
>gi|83945661|ref|ZP_00958007.1| CBS domain protein [Oceanicaulis sp. HTCC2633]
gi|83851027|gb|EAP88886.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 143
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T + IL KG + T+ +A ++TQH VGA++V G+Q G+ +ERD
Sbjct: 2 TAARILDDKG----ATVFTLAPSQTLQEAAVALTQHRVGAVIVTDAGDQP--VGVFSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
R I G S+ S +V +M+
Sbjct: 56 LARAIAGSGPSALSERVESVMS 77
>gi|327311248|ref|YP_004338145.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
gi|326947727|gb|AEA12833.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
Length = 142
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
T D T+ DA K + +HN+G LV+V ++ V G+++ERD +R +
Sbjct: 14 ATPDITIKDAAKILREHNIGLLVLVDREDRSKVVGVVSERDIVRAV 59
>gi|387898071|ref|YP_006328367.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
gi|387172181|gb|AFJ61642.1| IMP dehydrogenase [Bacillus amyloliquefaciens Y2]
Length = 165
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 32 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 86
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 87 KITDAMTERV 96
>gi|167631117|ref|YP_001681616.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 142
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D+T+ +A K M + NVGA+ VV E + GIIT+RD + +++ +G + T + MT
Sbjct: 18 DETIIEAAKIMMRLNVGAVPVV---EGQKCVGIITDRDIVLRVVAKGMDPRGTTIQSAMT 74
Query: 137 EE 138
++
Sbjct: 75 KD 76
>gi|147920346|ref|YP_685881.1| hypothetical protein RCIX1257 [Methanocella arvoryzae MRE50]
gi|110621277|emb|CAJ36555.1| conserved hypothetical protein [Methanocella arvoryzae MRE50]
Length = 138
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 70 SWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
S + C T T DA M N G ++VV + SV GI+T+R K + + + K+
Sbjct: 9 SEIACVDTKSTAADAAAKMKNQNTGTVIVV---DGDSVKGIVTDRQIAIKAVAEKKDPKN 65
Query: 129 TKVGDIMTEEV 139
T V DIMT+++
Sbjct: 66 TPVSDIMTKDI 76
>gi|168028312|ref|XP_001766672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682104|gb|EDQ68525.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ +TV A K M ++ + ++++V P + + GI+T +D L +++ QG ++T +
Sbjct: 249 CSASETVTAATKKMKENRMNSVIIVSPSNKPT--GILTSKDVLMRVVAQGLPPETTTLDK 306
Query: 134 IMT 136
+MT
Sbjct: 307 VMT 309
>gi|302348349|ref|YP_003815987.1| signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
saccharovorans 345-15]
Length = 141
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T D T+ +A + M G++VVV P + V GI TERD R +V R S +K+GD
Sbjct: 22 ATADATLAEAARLMYTKGTGSVVVVSP--EGKVIGIFTERDLSR--VVADRVSYDSKLGD 77
Query: 134 IMTEE 138
+MT++
Sbjct: 78 LMTKD 82
>gi|294010055|ref|YP_003543515.1| hypothetical protein SJA_C1-00690 [Sphingobium japonicum UT26S]
gi|390169622|ref|ZP_10221555.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
gi|389587626|gb|EIM65688.1| hypothetical protein SIDU_19051 [Sphingobium indicum B90A]
Length = 142
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + DTV V+ + Q +G + VV GE V GI +ERD
Sbjct: 2 TIAAILQRKGQ----DVVQVQSSDTVLSVVRLLAQRRIGCVPVVDDGE---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
++ +G + VG+IMT
Sbjct: 55 LAYRVAQEGAAVLDRPVGEIMT 76
>gi|325982180|ref|YP_004294582.1| putative signal transduction protein with CBS domains [Nitrosomonas
sp. AL212]
gi|325531699|gb|ADZ26420.1| putative signal transduction protein with CBS domains [Nitrosomonas
sp. AL212]
Length = 149
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+TV +A K M Q +VGA++V+ KP + G++T+RD + +++ VGDIM
Sbjct: 17 DETVQEAAKLMRQFHVGAVIVIDKPNGRAVPVGVVTDRDLIVEVMATELDETVITVGDIM 76
Query: 136 TEEV 139
++
Sbjct: 77 VPDI 80
>gi|154685914|ref|YP_001421075.1| hypothetical protein RBAM_014810 [Bacillus amyloliquefaciens FZB42]
gi|375362142|ref|YP_005130181.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421731836|ref|ZP_16170959.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429505048|ref|YP_007186232.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|451347135|ref|YP_007445766.1| YlbB [Bacillus amyloliquefaciens IT-45]
gi|154351765|gb|ABS73844.1| YlbB [Bacillus amyloliquefaciens FZB42]
gi|371568136|emb|CCF04986.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074049|gb|EKE47039.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429486638|gb|AFZ90562.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|449850893|gb|AGF27885.1| YlbB [Bacillus amyloliquefaciens IT-45]
Length = 147
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 69 KITDAMTERV 78
>gi|167744310|ref|ZP_02417084.1| CBS domain protein [Burkholderia pseudomallei 14]
gi|167829862|ref|ZP_02461333.1| CBS domain protein [Burkholderia pseudomallei 9]
gi|226199249|ref|ZP_03794809.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|254264311|ref|ZP_04955176.1| CBS domain protein [Burkholderia pseudomallei 1710a]
gi|225928656|gb|EEH24683.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
gi|254215313|gb|EET04698.1| CBS domain protein [Burkholderia pseudomallei 1710a]
Length = 149
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVK-PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C DTV DA M +VG L+VV G + G++T+RD + +I +G + VG
Sbjct: 14 CRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKGVDPAALFVG 73
Query: 133 DIMT 136
+IM+
Sbjct: 74 EIMS 77
>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
Length = 142
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
DAV+ + + +GA+VV G + +AGI++ERD +R I +G + S + DIMT +V
Sbjct: 25 DAVRFLADNKIGAVVVTGAGGK--IAGILSERDIVRAIASRGADALSAPIYDIMTSKV 80
>gi|17987023|ref|NP_539657.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
gi|17982676|gb|AAL51921.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
str. 16M]
Length = 157
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++E D
Sbjct: 16 TVRSILETKGRDV----VVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSECD 69
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 70 VVRALAAQESQAMSKSVAEVMTSKV 94
>gi|394993831|ref|ZP_10386571.1| YlbB [Bacillus sp. 916]
gi|393805402|gb|EJD66781.1| YlbB [Bacillus sp. 916]
Length = 147
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 69 KITDAMTERV 78
>gi|282162967|ref|YP_003355352.1| hypothetical protein MCP_0297 [Methanocella paludicola SANAE]
gi|282155281|dbj|BAI60369.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 325
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D ++ DA+K M +VG + V+ P + V GIITERD +R + G S TKV DIM+
Sbjct: 143 DASLDDAIKVMIDRSVGGVPVIDP--ESIVVGIITERDIVR---LMGDSVSGTKVRDIMS 197
Query: 137 EEV 139
V
Sbjct: 198 RRV 200
>gi|260565500|ref|ZP_05835984.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|265991326|ref|ZP_06103883.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151568|gb|EEW86662.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|263002110|gb|EEZ14685.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 143
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + + DT+ AV + +H +GALVV E + GI++E D
Sbjct: 2 TVRSILETKGR----DVVVIASADTLSQAVAMLNKHKIGALVVCD--EAGHIEGILSECD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRALAAQESQAMSKSVAEVMTSKV 80
>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 143
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 55 TISDILKAKGKGADGSWLWCTT--DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
T+S IL KG CT D TV DAV + +GA+VVV + SV GII+E
Sbjct: 2 TVSVILSRKGND------ICTIGPDATVGDAVARLAGRRIGAIVVVD--DAMSVEGIISE 53
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD +R I QG + + + +MT V
Sbjct: 54 RDVVRLIGEQGVNVLAEPLSSVMTRAV 80
>gi|378776683|ref|YP_005185120.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|364507497|gb|AEW51021.1| hypothetical protein lp12_0750 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 164
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 38 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 95
Query: 133 DIMTEEV 139
D++ V
Sbjct: 96 DVVYNNV 102
>gi|384265079|ref|YP_005420786.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|380498432|emb|CCG49470.1| YlbB [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
Length = 147
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 69 KITDAMTERV 78
>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
Length = 144
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK+K A + D +V DA K ++ +G++VV G K+ GI++ERD
Sbjct: 3 VHQILKSK---ASAEVVTIGPDASVADAAKVLSLRKIGSVVVSSNG--KTADGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ V+G + VG++MT ++
Sbjct: 58 VREVGVRGAGCLTETVGNMMTRDL 81
>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
Length = 143
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL KG + DAV+ M VGA++VV E+ + GI TERD
Sbjct: 3 VSDILAKKGN----KIFKILPSKAMIDAVQGMAAFKVGAVLVVD--EKDNTLGIFTERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
R + G + VGD MT
Sbjct: 57 TRCLAAHGAPVLAEPVGDHMT 77
>gi|315230762|ref|YP_004071198.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
barophilus MP]
gi|315183790|gb|ADT83975.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
barophilus MP]
Length = 179
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV K + ++ V + V+V E + GI+T+RD L KI+ +G++ K KV +IMT
Sbjct: 21 EDTVDKVAKILAKNKVSSAVIV---ENDEIIGIVTDRDILDKIVAKGKNPKHIKVREIMT 77
Query: 137 E 137
+
Sbjct: 78 K 78
>gi|442770277|gb|AGC70997.1| CBS domain protein [uncultured bacterium A1Q1_fos_2107]
Length = 145
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG + + T+ +AV + +GALVV G ++V GI++ERD
Sbjct: 3 VSDILRHKGT----DVITVRPETTIENAVGVLGTRRIGALVVSDDG--RTVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ + GR+ ++ V +MT +V
Sbjct: 57 VAHLAAVGRTGLNSTVATVMTRDV 80
>gi|398309985|ref|ZP_10513459.1| CBS domain pair sporulation protein YhcV [Bacillus mojavensis
RO-H-1]
Length = 140
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ ++
Sbjct: 71 VMSTDL 76
>gi|336233555|ref|YP_004586171.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718281|ref|ZP_17692463.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidans TNO-09.020]
gi|335360410|gb|AEH46090.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365292|gb|EID42589.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 488
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T + VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I STK+ D+MT+E
Sbjct: 145 FI-----QDYSTKISDVMTKE 160
>gi|312109160|ref|YP_003987476.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311214261|gb|ADP72865.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
Length = 488
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T + VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I STK+ D+MT+E
Sbjct: 145 FI-----QDYSTKISDVMTKE 160
>gi|452855446|ref|YP_007497129.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079706|emb|CCP21463.1| putative oxidoreductase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 147
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 14 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 68
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 69 KITDAMTERV 78
>gi|54293724|ref|YP_126139.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|296106328|ref|YP_003618028.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|397663308|ref|YP_006504846.1| hypothetical protein LPO_0821 [Legionella pneumophila subsp.
pneumophila]
gi|397666421|ref|YP_006507958.1| hypothetical protein LPV_0865 [Legionella pneumophila subsp.
pneumophila]
gi|53753556|emb|CAH15011.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
gi|295648229|gb|ADG24076.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
Alcoy]
gi|395126719|emb|CCD04902.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
gi|395129832|emb|CCD08065.1| conserved hypothetical protein, CBS domain [Legionella pneumophila
subsp. pneumophila]
Length = 144
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKNLSLETAKVS 75
Query: 133 DIMTEEV 139
D++ V
Sbjct: 76 DVVYNNV 82
>gi|386757597|ref|YP_006230813.1| oxidoreductase [Bacillus sp. JS]
gi|384930879|gb|AFI27557.1| oxidoreductase [Bacillus sp. JS]
Length = 140
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVGA+ V EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGAIPV---AEQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ E+
Sbjct: 71 VMSTEL 76
>gi|296332343|ref|ZP_06874804.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673622|ref|YP_003865294.1| oxidoreductase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296150261|gb|EFG91149.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411866|gb|ADM36985.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 140
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M QHNVGA+ VV EQ + G++T+RD + QGR + T V ++M+
Sbjct: 18 NQTIQEAASLMKQHNVGAIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSEVMS 73
Query: 137 EEV 139
++
Sbjct: 74 TDL 76
>gi|408404194|ref|YP_006862177.1| signal transduction protein [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364790|gb|AFU58520.1| putative signal transduction protein with CBS domains [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 141
Score = 42.0 bits (97), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D + +A K+M + + ++ VVK G+ GI++ERD+++KI + K+GDIM+
Sbjct: 5 DKSALEAAKTMAEKGISSVFVVKDGQP---VGIVSERDFIKKICAKELPIAQVKIGDIMS 61
Query: 137 E 137
+
Sbjct: 62 K 62
>gi|253996778|ref|YP_003048842.1| putative signal transduction protein [Methylotenera mobilis JLW8]
gi|253983457|gb|ACT48315.1| putative signal transduction protein with CBS domains
[Methylotenera mobilis JLW8]
Length = 149
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D TV++A + M H+VG +VVV+ + K + GI+T+RD + +++ K V DIM
Sbjct: 17 DATVFEAAQLMRNHHVGDVVVVEENQGKLIPVGIVTDRDLVIEVVATALDCKVITVSDIM 76
>gi|28898676|ref|NP_798281.1| hypothetical protein VP1902 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364891|ref|ZP_05777462.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
gi|260898817|ref|ZP_05907258.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|417319569|ref|ZP_12106127.1| hypothetical protein VP10329_18690 [Vibrio parahaemolyticus 10329]
gi|433658011|ref|YP_007275390.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio parahaemolyticus BB22OP]
gi|28806894|dbj|BAC60165.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308086670|gb|EFO36365.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|308111605|gb|EFO49145.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
gi|328474759|gb|EGF45564.1| hypothetical protein VP10329_18690 [Vibrio parahaemolyticus 10329]
gi|432508699|gb|AGB10216.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio parahaemolyticus BB22OP]
Length = 629
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVV 97
E +SAR+ + E+ +D+ +K K G T+ A + M Q N+ +L++
Sbjct: 127 EVENSARLRQTISENKDANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLI 186
Query: 98 VKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 187 VDPDFVLDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSTVMTTEV 234
>gi|416978034|ref|ZP_11937767.1| putative signal-transduction protein [Burkholderia sp. TJI49]
gi|325520023|gb|EGC99252.1| putative signal-transduction protein [Burkholderia sp. TJI49]
Length = 151
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDKPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ ++ G + +V +M E +
Sbjct: 56 ILRLHENGGAIGDVQVRKVMDEPL 79
>gi|311067406|ref|YP_003972329.1| oxidoreductase [Bacillus atrophaeus 1942]
gi|419822609|ref|ZP_14346188.1| putative oxidoreductase [Bacillus atrophaeus C89]
gi|310867923|gb|ADP31398.1| putative oxidoreductase [Bacillus atrophaeus 1942]
gi|388473323|gb|EIM10067.1| putative oxidoreductase [Bacillus atrophaeus C89]
Length = 140
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+++ T+ +A M QHNVGA+ VV +Q + G++T+RD + QGR + T V +
Sbjct: 15 VSSNQTIQEAAALMHQHNVGAIPVV---DQGVLQGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ V
Sbjct: 71 VMSSNV 76
>gi|344341320|ref|ZP_08772241.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343798900|gb|EGV16853.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 480
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D+++ AV+ M++ N+ ++VV +Q V G++T+RD K++ +GR +V D
Sbjct: 22 CEQDESLVAAVEMMSERNISSIVVCS--DQVPV-GMVTDRDLRNKVVARGRDPGELRVSD 78
Query: 134 IM 135
IM
Sbjct: 79 IM 80
>gi|385264621|ref|ZP_10042708.1| CBS domain-containing protein [Bacillus sp. 5B6]
gi|385149117|gb|EIF13054.1| CBS domain-containing protein [Bacillus sp. 5B6]
Length = 172
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M +VGA+ +V + ++ GI+T+RD ++++G +SK S
Sbjct: 39 YCTVLDNVYEAAVKMKDADVGAIPIVDE-DGATLVGIVTDRD----LVLRGIASKKPNSQ 93
Query: 130 KVGDIMTEEV 139
K+ D MTE V
Sbjct: 94 KITDAMTERV 103
>gi|253681591|ref|ZP_04862388.1| CBS domain protein [Clostridium botulinum D str. 1873]
gi|416361994|ref|ZP_11682558.1| CBS domain-containing protein [Clostridium botulinum C str.
Stockholm]
gi|253561303|gb|EES90755.1| CBS domain protein [Clostridium botulinum D str. 1873]
gi|338194313|gb|EGO86795.1| CBS domain-containing protein [Clostridium botulinum C str.
Stockholm]
Length = 142
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M+++NVG++ V + GE+ V GI+T+RD + QG++ KV DIM+
Sbjct: 17 EDTVERAAQMMSEYNVGSIPVCR-GEE--VVGIVTDRDITLRSSAQGKNVHQQKVKDIMS 73
>gi|338738933|ref|YP_004675895.1| hypothetical protein HYPMC_2103 [Hyphomicrobium sp. MC1]
gi|337759496|emb|CCB65325.1| conserved protein of unknown function with 2 CBS domains
[Hyphomicrobium sp. MC1]
Length = 142
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I ILK+KG+ S + + DT+ + + +GA+V++ E +AGII+ERD
Sbjct: 3 IGQILKSKGR----SVMTASPADTLQEIALRLASRKIGAIVIL---ENNKLAGIISERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R I G + + D MT +V
Sbjct: 56 IRLIAEHGPKALAMTANDGMTRDV 79
>gi|12082815|gb|AAG48621.1|AF319543_1 cystathionine beta-synthase [Streptomyces venezuelae ATCC 10712]
Length = 463
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 46 MEEHGF----ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG 101
M HGF S T++D+L+ K G S + D+TV A++ + ++ V + +VKPG
Sbjct: 311 MAGHGFLEDTSSATVADVLRHKEGGTMPSLVHMHPDETVGQAIEVLREYGVSQMPIVKPG 370
Query: 102 E------QKSVAGIITERDYLRKIIVQ 122
V G + ERD L + Q
Sbjct: 371 AGHPDVMAAEVVGSVVERDVLDALFTQ 397
>gi|381165005|ref|ZP_09874235.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea NA-128]
gi|379256910|gb|EHY90836.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea NA-128]
Length = 138
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVMRAARTMAAEGVGALPI--QGEDHKLKGMLTDRDVVVKVLAEGKDPMAVHVG 71
Query: 133 DIMTEEV 139
++ EV
Sbjct: 72 ELAQGEV 78
>gi|171184891|ref|YP_001793810.1| signal-transduction protein [Pyrobaculum neutrophilum V24Sta]
gi|170934103|gb|ACB39364.1| putative signal-transduction protein with CBS domains [Pyrobaculum
neutrophilum V24Sta]
Length = 130
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+T+ + + + +N+GALVVV P K GIITERD +R I
Sbjct: 23 ETLVEVAEKLATNNIGALVVVNPQNTKKPVGIITERDVVRAI 64
>gi|350531020|ref|ZP_08909961.1| hypothetical protein VrotD_07857 [Vibrio rotiferianus DAT722]
Length = 629
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKG---ADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95
E +SAR+ + E++ +D+ +K K D + T+ +A + M Q NV +L
Sbjct: 127 EVENSARLRQAVSENSDANDLTTSKVKTLLTRDAPTI--ERGQTIQEAAQLMAQDNVSSL 184
Query: 96 VVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
++V P Q V GIIT+RD +++ +G S +V +MT EV
Sbjct: 185 LIVDPDFVLDEEDPQSPVVGIITDRDLCTRVLAEGLSPLD-EVSTVMTTEV 234
>gi|284989355|ref|YP_003407909.1| putative signal transduction protein with CBS domains
[Geodermatophilus obscurus DSM 43160]
gi|284062600|gb|ADB73538.1| putative signal transduction protein with CBS domains
[Geodermatophilus obscurus DSM 43160]
Length = 143
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 56 ISDILKAKGKGADGSWLWCTTDD--TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
IS +L+ KG G T D +V A+ + +H VGALVV G +SV GI++ER
Sbjct: 3 ISQLLRRKGAG------VATVDAAASVRTALALLAEHGVGALVVSADG--RSVDGIVSER 54
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D +R + +G + V +MT +V
Sbjct: 55 DVVRALHERGAGLLADPVSSVMTAQV 80
>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
JL354]
Length = 143
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C T + DAV + + +GAL V+ G+ VAGI +ERD + + QG S VG+
Sbjct: 18 CQTQTPMRDAVTLLAEKRIGALPVMDGGK---VAGIFSERDVIYCMAAQGPSCLERPVGE 74
Query: 134 IMT 136
+MT
Sbjct: 75 VMT 77
>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
[Archaeoglobus profundus DSM 5631]
Length = 177
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 74 CTT--DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
CT DDT+ A K M + VG++VV++ G GI+TE+D L K++ + + K+
Sbjct: 16 CTARKDDTLLTASKKMIKFGVGSVVVIEDGRP---IGIVTEKDILYKVVSKNKLPSKVKL 72
Query: 132 GDIMT 136
DIM+
Sbjct: 73 KDIMS 77
>gi|193215453|ref|YP_001996652.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Chloroherpeton thalassium ATCC 35110]
gi|193088930|gb|ACF14205.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chloroherpeton thalassium ATCC
35110]
Length = 649
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D ++ A K M + NVG++++V E + GIIT+ D +K++ + KS V +
Sbjct: 183 CSPDISIQKAAKIMAERNVGSIIMVT--ENRFPIGIITDTDLRKKVVAVEENIKSRPVSE 240
Query: 134 IMTEEV 139
IM+ V
Sbjct: 241 IMSSPV 246
>gi|407780598|ref|ZP_11127819.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
gi|407208825|gb|EKE78732.1| signal transduction protein with CBS domains [Oceanibaculum indicum
P24]
Length = 140
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
TV +A K M +H +GA++VV E+K GI T RD + +++ +G + T + +MT
Sbjct: 23 TVLEACKIMQKHRIGAIIVVD--EEKRPVGIFTGRDAVNRVLAKGLDGRRTLLSAVMT 78
>gi|15679234|ref|NP_276351.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622334|gb|AAB85712.1| inosine-5'-monophosphate dehydrogenase related protein II
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 281
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DT DA + M + NVG+L+V+ GE+ +AGI+T++D LR + R + KV D+MT
Sbjct: 91 NDTPRDAAELMLRKNVGSLLVMD-GEE--LAGIVTKKDLLR--FFKDRCAGRWKVRDLMT 145
Query: 137 EEV 139
E+V
Sbjct: 146 EDV 148
>gi|409203437|ref|ZP_11231640.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
flavipulchra JG1]
Length = 612
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
++ DA K M+QH V +++V EQ + G++T+RD +++ Q + S + +IMTE+
Sbjct: 167 SIRDAAKLMSQHRVSSIMVT---EQARLVGVVTDRDLRNRVLAQDKDP-SAPLAEIMTEK 222
>gi|312111796|ref|YP_003990112.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|336236179|ref|YP_004588795.1| hypothetical protein Geoth_2826 [Geobacillus thermoglucosidasius
C56-YS93]
gi|423720712|ref|ZP_17694894.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216897|gb|ADP75501.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
gi|335363034|gb|AEH48714.1| CBS domain containing protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|383366065|gb|EID43356.1| CBS domain-containing protein [Geobacillus thermoglucosidans
TNO-09.020]
Length = 139
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 10/70 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D VY+A M NVGA+ +V G+ + G+IT+RD ++V+G ++K ST
Sbjct: 14 YCTPVDNVYEAAVKMRDFNVGAIPIVDHGQ---LIGMITDRD----LVVRGIAAKRPGST 66
Query: 130 KVGDIMTEEV 139
V ++M++++
Sbjct: 67 PVTEVMSDKL 76
>gi|167587382|ref|ZP_02379770.1| putative transcriptional regulator, XRE family protein
[Burkholderia ubonensis Bu]
Length = 154
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + +AV +M +H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLREAVDTMAEHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ ++ G + +V +M E
Sbjct: 56 ILRLRENGGAIGEVQVRKVMDE 77
>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
Length = 144
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ ILK K AD + D V DAV ++Q+ +G +VV G+ ++ GI++ERD
Sbjct: 3 VGQILKTK---ADMGVVSVKPTDMVTDAVTLLSQNRIGTVVV--SGDGVTLDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G S S V +IMT ++
Sbjct: 58 VRELGKRGVSCLSAPVSEIMTAKL 81
>gi|418460945|ref|ZP_13032028.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea SZMC 14600]
gi|359738971|gb|EHK87848.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora azurea SZMC 14600]
Length = 138
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVMRAARTMAAEGVGALPI--QGEDHKLKGMLTDRDVVVKVLAEGKDPMAVHVG 71
Query: 133 DIMTEEV 139
++ EV
Sbjct: 72 ELAQGEV 78
>gi|429205041|ref|ZP_19196321.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus saerimneri
30a]
gi|428146650|gb|EKW98886.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus saerimneri
30a]
Length = 495
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T DD+V +A M ++ + + +V+ E K GIIT RD LR + + STK+
Sbjct: 102 FFLTPDDSVANAEALMKKYRISGVPIVETMENKKFCGIITNRD-LRFV-----TDYSTKI 155
Query: 132 GDIMTEE 138
G++MT+E
Sbjct: 156 GNVMTKE 162
>gi|301062296|ref|ZP_07202962.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300443596|gb|EFK07695.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 149
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS-TKVGDIMTE 137
T+ DAV +MT+ N AL+V+ + + GIITERD LR + G S +V D+MTE
Sbjct: 22 TLKDAVLTMTEQNQSALIVM---DGRKTVGIITERDILRSYVKHGDLPLSKIQVKDVMTE 78
Query: 138 EV 139
++
Sbjct: 79 KL 80
>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
TM1040]
Length = 174
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ D+L +K +G W +DTV AV+ + +GAL+V Q + GI++ERD
Sbjct: 34 TVGDVLASK----NGELYWINPEDTVAKAVEVLRDRGIGALLV--KNAQGDLVGILSERD 87
Query: 115 YLRKI 119
+R++
Sbjct: 88 IVRRL 92
>gi|52840978|ref|YP_094777.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628089|gb|AAU26830.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 174
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 48 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKSLSLETAKVS 105
Query: 133 DIMTEEV 139
D++ V
Sbjct: 106 DVVYTNV 112
>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 144
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K A+ L T D +V DA +++ VGA++V + G GI++ERD
Sbjct: 3 VSQILKDK---ANQGVLTVTKDTSVADASAILSREKVGAVIVSEDGVHPQ--GIVSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R++ +G + V IMTE++
Sbjct: 58 VRELGARGTGCLTDPVSAIMTEKL 81
>gi|399069756|ref|ZP_10749492.1| CBS domain-containing protein, partial [Caulobacter sp. AP07]
gi|398044944|gb|EJL37733.1| CBS domain-containing protein, partial [Caulobacter sp. AP07]
Length = 102
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T+ DA + M + GAL V GE + G+IT+RD + + +G+ + +VGD+M+
Sbjct: 18 ETIRDAARMMVDCDAGALPV---GENDRLVGVITDRDIAVRAVAEGKGPDA-RVGDVMSA 73
Query: 138 EV 139
EV
Sbjct: 74 EV 75
>gi|398786405|ref|ZP_10549146.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
gi|396993706|gb|EJJ04767.1| putative signal-transduction protein with CBS domain [Streptomyces
auratus AGR0001]
Length = 149
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+D+V DA ++T+ VGAL + G S+ G++T+RD + K++ +G+ + TK G++
Sbjct: 7 EDSVLDAACTLTRLAVGALPIR--GSDGSLTGVLTDRDIVIKVLGKGKDPRRTKAGEL 62
>gi|338737266|ref|YP_004674228.1| signal transduction protein [Hyphomicrobium sp. MC1]
gi|337757829|emb|CCB63652.1| Putative signal transduction protein with CBS domains (fragment)
[Hyphomicrobium sp. MC1]
Length = 145
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ +ILKAK + L DDT+ V+ + VGA+VV + G+ ++ GII+ERD
Sbjct: 3 VQNILKAK---KNAHVLTVRPDDTILKLVQMLRAEGVGAMVVSRDGQ--ALDGIISERDV 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + + + +MT E+
Sbjct: 58 VRALATNENRLLALPISALMTHEI 81
>gi|76819482|ref|YP_336586.1| hypothetical protein BURPS1710b_A1429 [Burkholderia pseudomallei
1710b]
gi|76583955|gb|ABA53429.1| CBS domain protein [Burkholderia pseudomallei 1710b]
Length = 211
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVK-PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C DTV DA M +VG L+VV G + G++T+RD + +I +G + VG
Sbjct: 76 CRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKGVDPAALFVG 135
Query: 133 DIMT 136
+IM+
Sbjct: 136 EIMS 139
>gi|378953287|ref|YP_005210775.1| putative signal transduction protein [Pseudomonas fluorescens F113]
gi|359763301|gb|AEV65380.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Pseudomonas fluorescens F113]
Length = 646
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D + +AVK M + VG++VVV EQK+ GI T RD LR ++ G S +
Sbjct: 192 CSPDTPLREAVKLMHEQQVGSIVVVN--EQKAPVGIFTLRD-LRHVVADGDGDFSQAIVG 248
Query: 134 IMTE 137
MT+
Sbjct: 249 YMTQ 252
>gi|346993348|ref|ZP_08861420.1| CBS domain-containing protein [Ruegeria sp. TW15]
Length = 174
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT+S +L+ KG +DT++ V + + +GA+VV + S+ GI++ER
Sbjct: 33 TTVSKLLEGKGDAV----FSVRPNDTIHSVVDILREKRIGAVVVTD--QNGSLQGILSER 86
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D +R++ + V D+MT EV
Sbjct: 87 DIVRRMAETPGQTLPQSVADLMTTEV 112
>gi|424033281|ref|ZP_17772695.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|424037998|ref|ZP_17776670.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
gi|408874863|gb|EKM14028.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-01]
gi|408894898|gb|EKM31459.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-02]
Length = 629
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKG---ADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95
E +SAR+ + E+ +D+ +K K D + T+ +A + M Q NV +L
Sbjct: 127 EVENSARLRQAVSENNDANDLTTSKVKTLLTRDAPTI--ERGQTIQEAAQLMAQDNVSSL 184
Query: 96 VVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
++V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 185 LIVDPDFVLDEEDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSTVMTTEV 234
>gi|374623680|ref|ZP_09696184.1| signal transduction protein with CBS domains [Ectothiorhodospira
sp. PHS-1]
gi|373942785|gb|EHQ53330.1| signal transduction protein with CBS domains [Ectothiorhodospira
sp. PHS-1]
Length = 480
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C + + D VK M + N+ ++VV + + GIIT+RD K++ GR S KV D
Sbjct: 22 CRPGEGLVDVVKVMKEKNISSVVVCD--DAGAPIGIITDRDLRNKVVPSGRDPGSFKVAD 79
Query: 134 IMT 136
+M
Sbjct: 80 VMN 82
>gi|374635448|ref|ZP_09707047.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373562321|gb|EHP88536.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 176
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T YD M +N+G +VVV+ + GI+TERD + I+ + K + DIMT
Sbjct: 17 DTTAYDVANIMKDNNIGCVVVVEKDSKP--LGIVTERDLVINIVAKNLKPKDVLIKDIMT 74
>gi|375008052|ref|YP_004981685.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359286901|gb|AEV18585.1| CBS domain protein [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 141
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEEV 139
V ++M+ ++
Sbjct: 67 AVTEVMSRDL 76
>gi|331268732|ref|YP_004395224.1| hypothetical protein CbC4_0547 [Clostridium botulinum BKT015925]
gi|329125282|gb|AEB75227.1| CBS domain protein, putative [Clostridium botulinum BKT015925]
Length = 142
Score = 41.6 bits (96), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M+++NVG++ V + GE+ V GI+T+RD + QG++ KV DIM+
Sbjct: 17 EDTVERAAQMMSEYNVGSIPVCR-GEE--VVGIVTDRDITLRSSAQGKNVHQQKVKDIMS 73
>gi|163782940|ref|ZP_02177935.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881620|gb|EDP75129.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
Length = 624
Score = 41.6 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V +A + M + N + V V G+ GI+TERD +++++ +GR ST++ +IM+
Sbjct: 170 EDSVLEAARLMREKNF-SCVFVGNGQ----TGIVTERDIIKRVVAEGRDPSSTRLSEIMS 224
Query: 137 EEV 139
V
Sbjct: 225 YPV 227
>gi|308126312|ref|ZP_07663708.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
gi|308106850|gb|EFO44390.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
Length = 519
Score = 41.6 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVV 97
E +SAR+ + E+ +D+ +K K G T+ A + M Q N+ +L++
Sbjct: 17 EVENSARLRQTISENKDANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLI 76
Query: 98 VKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
V P Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 77 VDPDFVLDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSTVMTTEV 124
>gi|402771426|ref|YP_006590963.1| signal transduction protein with CBS domains [Methylocystis sp.
SC2]
gi|401773446|emb|CCJ06312.1| Putative signal transduction protein with CBS domains
[Methylocystis sp. SC2]
Length = 143
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TIS+IL KG+ + + D T+ +A + M ++ +GALV++ G + +AG+I ERD
Sbjct: 2 TISNILAEKGR----EVVTASADTTLQEAAQLMMRYRIGALVILDDGGR--LAGLIAERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIM 135
+ + + G + + ++ M
Sbjct: 56 IVSAVALDGPEALTQRISAYM 76
>gi|328951426|ref|YP_004368761.1| hypothetical protein Marky_1921 [Marinithermus hydrothermalis DSM
14884]
gi|328451750|gb|AEB12651.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
DSM 14884]
Length = 556
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+ +A + M ++N+G +VV G+ G++T+RD +++ QG K TKV +MT EV
Sbjct: 20 IAEACRLMEENNIGCVVVSDNGKP---LGLVTDRDLTLRVLRQGMDPKKTKVEQVMTREV 76
>gi|357024432|ref|ZP_09086584.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
gi|355543664|gb|EHH12788.1| putative signal transduction protein with CBS domains
[Mesorhizobium amorphae CCNWGS0123]
Length = 143
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG L ++ + +A++ +T+H +GALV+ G+ K + GI++ERD
Sbjct: 2 TVKAILEKKGH----DVLTLGPNEKLSEAIRILTEHRIGALVITN-GDHK-IVGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R I +G ++ V MT +V
Sbjct: 56 IVRVIAREGAAALEIPVRSAMTPKV 80
>gi|413962959|ref|ZP_11402186.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
gi|413928791|gb|EKS68079.1| hypothetical protein BURK_023645 [Burkholderia sp. SJ98]
Length = 150
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + T D + DA+ +M H++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILKVKG----NTLFTVTPDTPLSDAIDTMAAHDIGSLVVMEYGD---LVGMLTFREI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTE 137
+ + G S +T + +M +
Sbjct: 56 ILTLHNNGGSVGATTIRKVMDD 77
>gi|240102779|ref|YP_002959088.1| hypothetical protein TGAM_0722 [Thermococcus gammatolerans EJ3]
gi|239910333|gb|ACS33224.1| Conserved hypothetical protein, containing 2 CBS-domains
[Thermococcus gammatolerans EJ3]
Length = 136
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A + MT+ ++G+LVVV E V G +T+ D +R+++V G + +T V +IMT
Sbjct: 21 DDTVKRAGEIMTEFDIGSLVVVD--ENGDVVGFLTKGDIIRRLVVPGLPN-TTPVREIMT 77
Query: 137 EEV 139
+ +
Sbjct: 78 KNL 80
>gi|189346783|ref|YP_001943312.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Chlorobium limicola DSM 245]
gi|189340930|gb|ACD90333.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Chlorobium limicola DSM 245]
Length = 649
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D +V A K M+ N+G+++VV P + GIIT+ D +K++ Q S V +
Sbjct: 183 CSPDISVRAAAKIMSDCNIGSILVVSP--ENHPLGIITDTDLRKKVVAQPGSVNERPVHE 240
Query: 134 IMTEEV 139
IM+ V
Sbjct: 241 IMSSPV 246
>gi|443471468|ref|ZP_21061535.1| putative signal-transduction protein [Pseudomonas pseudoalcaligenes
KF707]
gi|442901498|gb|ELS27364.1| putative signal-transduction protein [Pseudomonas pseudoalcaligenes
KF707]
Length = 644
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DAV+ M + VG++V+V PG + GI T RD LR++I + + + D+MT+
Sbjct: 198 DAVRLMHEQQVGSIVIVDPGHRP--LGIFTLRD-LRRVIADASADLAQPIADLMTQ 250
>gi|329888084|ref|ZP_08266682.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
gi|328846640|gb|EGF96202.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
Length = 142
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG + D ++ DA + + VGAL+V + SV G+++ERD
Sbjct: 3 VAEILKGKGD----AVFTLVPDASLNDACAELERRQVGALIVC---QDASVVGVLSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R I G + V MT EV
Sbjct: 56 VRAISRDGPEALKRPVSHYMTSEV 79
>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
gi|449066089|ref|YP_007433171.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449034597|gb|AGE70023.1| hypothetical protein SacN8_00210 [Sulfolobus acidocaldarius N8]
Length = 164
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V A + M +HN+G+L+V+ + V+GIITERD +R I + ++ V + MT
Sbjct: 19 DDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNYMT 73
Query: 137 EEV 139
V
Sbjct: 74 RNV 76
>gi|418618879|ref|ZP_13181731.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
VCU122]
gi|374826448|gb|EHR90345.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
VCU122]
Length = 488
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +VK E +++ GIIT RD LR I S K+
Sbjct: 100 FFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEE 138
D+MT+E
Sbjct: 154 SDVMTKE 160
>gi|18978325|ref|NP_579682.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397652399|ref|YP_006492980.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|18894155|gb|AAL82077.1| inosine-5'-monophosphate dehydrogenase related protein II
[Pyrococcus furiosus DSM 3638]
gi|393189990|gb|AFN04688.1| inosine-5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 179
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV K ++++ G+ VV++ E + G++TERD L K++ +G++ K KV +IMT+
Sbjct: 22 DTVDRVAKILSRNKAGSAVVMEGDE---ILGVVTERDILDKVVAKGKNPKEVKVEEIMTK 78
>gi|294675913|ref|YP_003576528.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
domain-/unknown function domain-containing protein
[Rhodobacter capsulatus SB 1003]
gi|294474733|gb|ADE84121.1| cyclic nucleotide-binding domain protein/cystathionine
beta-synthase domain protein/protein of unknown function
DUF294 domain protein [Rhodobacter capsulatus SB 1003]
Length = 608
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L CT + TV A + M +V +L VV PGE+ + GI+T+RD K++ G + T V
Sbjct: 152 LACTPETTVLTAARMMRDAHVSSLGVVDPGER--LLGIVTQRDLSNKVLADGLPT-GTAV 208
Query: 132 GDIMT 136
+MT
Sbjct: 209 AAVMT 213
>gi|89899203|ref|YP_521674.1| signal-transduction protein [Rhodoferax ferrireducens T118]
gi|89343940|gb|ABD68143.1| putative signal-transduction protein with CBS domains [Rhodoferax
ferrireducens T118]
Length = 150
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
M +H++GALVVV E+ GI+T+RD + +++ +G GDIM+
Sbjct: 29 MRKHHIGALVVVDTHEKTRPIGIVTDRDLVLELMAEGLDPAVFTAGDIMS 78
>gi|13541493|ref|NP_111181.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
gi|14324877|dbj|BAB59803.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 140
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D T Y+A M Q +VG L+V ++ + G++TE DY+ KII + + K+ +V +IM
Sbjct: 19 DTTAYEAAVVMAQDHVGFLIV---EDETGIRGMVTEWDYINKIISKDLNPKNVRVEEIMN 75
Query: 137 EEV 139
+
Sbjct: 76 SPI 78
>gi|404318969|ref|ZP_10966902.1| hypothetical protein OantC_12287 [Ochrobactrum anthropi CTS-325]
Length = 143
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL+ KG+ + DT+ AV + ++ +GALVV E + GI++ERD
Sbjct: 2 TVRSILETKGR----DVVVIAPADTLSHAVAMLNKYKIGALVVC--DEAGRIKGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + Q + S V ++MT +V
Sbjct: 56 VVRAVAAQETKAMSMPVTEVMTAKV 80
>gi|359688647|ref|ZP_09258648.1| signal transduction protein [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418749444|ref|ZP_13305734.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
gi|418755846|ref|ZP_13312036.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384117171|gb|EIE03426.1| CBS domain protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404274915|gb|EJZ42231.1| CBS domain protein [Leptospira licerasiae str. MMD4847]
Length = 146
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL+ K D L TV++A++ MT++++G+++V+K G+ +AGI TERD
Sbjct: 3 VKDILEKK----DRKILSVEPSTTVWEAIRFMTKYDIGSVIVLKEGK---LAGIFTERDL 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
L + V D+M+
Sbjct: 56 LHFASTDREAVFDKTVADLMS 76
>gi|314935156|ref|ZP_07842509.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
subsp. hominis C80]
gi|313656491|gb|EFS20230.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
subsp. hominis C80]
Length = 488
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D++VY+A M ++ + + +VK E +++ GIIT RD LR I S K+
Sbjct: 100 FFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEE 138
D+MT+E
Sbjct: 154 SDVMTKE 160
>gi|308094796|ref|ZP_07663052.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
gi|308093340|gb|EFO43035.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
Length = 357
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 42 SSARMEEHGFESTTISDILKAKGKGA-DGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP 100
+SAR+ + E+ +D+ +K K G T+ A + M Q N+ +L++V P
Sbjct: 130 NSARLRQTISENKDANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDP 189
Query: 101 G-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
Q V GIIT+RD +++ +G S + V +MT EV
Sbjct: 190 DFVLDEDDPQSPVLGIITDRDLCTRVLAEGLSPQD-DVSTVMTTEV 234
>gi|83716336|ref|YP_440504.1| hypothetical protein BTH_II2317 [Burkholderia thailandensis E264]
gi|167617296|ref|ZP_02385927.1| CBS domain protein [Burkholderia thailandensis Bt4]
gi|257141162|ref|ZP_05589424.1| CBS domain-containing protein [Burkholderia thailandensis E264]
gi|83650161|gb|ABC34225.1| CBS domain protein [Burkholderia thailandensis E264]
Length = 149
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C DTV+DA M +VG L+VV G+ G++T+RD + +I + + VG
Sbjct: 14 CRRTDTVFDAAHLMRDRHVGDLIVVDDVGQAHEPVGMLTDRDIVLSLIAKEVDPAALFVG 73
Query: 133 DIMTEEV 139
+IM+ V
Sbjct: 74 EIMSAPV 80
>gi|398309170|ref|ZP_10512644.1| inosine 5'-monophosphate dehydrogenase [Bacillus mojavensis RO-H-1]
Length = 488
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D VYDA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVYDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|269961701|ref|ZP_06176062.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|424046686|ref|ZP_17784248.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
gi|269833566|gb|EEZ87664.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408884746|gb|EKM23474.1| cyclic nucleotide-binding domain protein [Vibrio cholerae HENC-03]
Length = 629
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKG---ADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95
E +SAR+ + E+ +D+ +K K D + T+ +A + M Q NV +L
Sbjct: 127 EVENSARLRQAVSENNDANDLTTSKVKTLLTRDAPTI--ERGQTIQEAAQLMAQDNVSSL 184
Query: 96 VVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
++V P Q V GIIT+RD +++ +G S +V +MT EV
Sbjct: 185 LIVDPDFVLDEDDPQSPVVGIITDRDLCTRVLAEGLSPLD-EVSTVMTTEV 234
>gi|354616428|ref|ZP_09034061.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
gi|353219220|gb|EHB83826.1| putative signal transduction protein with CBS domains
[Saccharomonospora paurometabolica YIM 90007]
Length = 138
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T + DI+ A + + T ++V +A ++M VGAL V GE + G++T+R
Sbjct: 2 TRVQDIMTADPR-------FAETSESVSEAARTMASAGVGALPV--RGEDGELKGMLTDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D + K++ +G+ + VG++ + +V
Sbjct: 53 DIVVKVLAEGKDPVAVHVGELASGQV 78
>gi|54296767|ref|YP_123136.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
gi|53750552|emb|CAH11954.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
Length = 144
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDAHLIGIVSERDILRCYFHKSLSLETAKVS 75
Query: 133 DIMTEEV 139
D++ V
Sbjct: 76 DVVYTNV 82
>gi|449068365|ref|YP_007435446.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
gi|449036873|gb|AGE72298.1| hypothetical protein SacRon12I_00210 [Sulfolobus acidocaldarius
Ron12/I]
Length = 150
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DD+V A + M +HN+G+L+V+ + V+GIITERD +R I + ++ V + MT
Sbjct: 5 DDSVRFAAEEMKKHNIGSLIVID--NRGKVSGIITERDLVRAI---AEGNINSTVSNYMT 59
Query: 137 EEV 139
V
Sbjct: 60 RNV 62
>gi|332797972|ref|YP_004459472.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
gi|332695707|gb|AEE95174.1| paired CBS domain protein [Acidianus hospitalis W1]
Length = 164
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
T+ +A K M +HN+G+LVV+ Q V GIITERD +R +
Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERDVVRAV 59
>gi|52079398|ref|YP_078189.1| ABC transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646821|ref|ZP_08001050.1| YhcV protein [Bacillus sp. BT1B_CT2]
gi|404488260|ref|YP_006712366.1| CBS domain-containing protein YhcV [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423681359|ref|ZP_17656198.1| ABC transporter [Bacillus licheniformis WX-02]
gi|52002609|gb|AAU22551.1| ABC transporter YhcV [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52347260|gb|AAU39894.1| CBS domain protein YhcV [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391409|gb|EFV72207.1| YhcV protein [Bacillus sp. BT1B_CT2]
gi|383438133|gb|EID45908.1| ABC transporter [Bacillus licheniformis WX-02]
Length = 141
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+++ TV +A + M++HNVGA+ VV G K G+IT+RD + +G+ + T V ++
Sbjct: 16 SSNQTVQEAAELMSRHNVGAIPVVDQGVLK---GMITDRDITLRTTAEGQDGQ-TPVSNV 71
Query: 135 MTEEV 139
MT V
Sbjct: 72 MTTNV 76
>gi|407780017|ref|ZP_11127265.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
gi|407298147|gb|EKF17291.1| hypothetical protein NA2_18570 [Nitratireductor pacificus pht-3B]
Length = 143
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+ IL KG+ + D ++ +A + + +H +GA+VV + Q +AGI++ERD
Sbjct: 2 TVKAILDTKGR----DVVTIAPDKSLAEAAQILAEHGIGAVVVTRDAGQ--IAGILSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G + + V +MT +V
Sbjct: 56 IVRAVGQNGAAVLESPVSSVMTAKV 80
>gi|424055385|ref|ZP_17792908.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
gi|407438580|gb|EKF45123.1| hypothetical protein W9I_01784 [Acinetobacter nosocomialis Ab22222]
Length = 138
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T ++ ++K K + A + + TV +A+ M + +GALVV E + V GI++ER
Sbjct: 2 TIVAQVIKNKSEQA---IFTISPEATVLEAITIMAEKGIGALVV---AEGEKVVGILSER 55
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
DY RK+ + + V +IMT +V
Sbjct: 56 DYTRKVTLMEPT-----VAEIMTAKV 76
>gi|381209782|ref|ZP_09916853.1| hypothetical protein LGrbi_07651 [Lentibacillus sp. Grbi]
Length = 142
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
C +DT+Y+A M NVG + V E K + G+IT+RD ++++G + K +T
Sbjct: 15 CRKEDTLYEAAAKMRDRNVGVIPVC--SENKELMGVITDRD----LVLRGYAEKKPDTTT 68
Query: 131 VGDIMTEEV 139
V ++M++E+
Sbjct: 69 VQEVMSDEL 77
>gi|357022478|ref|ZP_09084705.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356477923|gb|EHI11064.1| CBS domain-containing protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 277
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ +D + +A +++ ++ +GA+V+ K G + GI+T+RD + + +G +TK+
Sbjct: 1 MVLNPNDPILEAARAIEENRIGAVVIQKGGR---LVGIVTDRDLAVRALGRGLDPNTTKI 57
Query: 132 GDIMTE 137
++MTE
Sbjct: 58 AEVMTE 63
>gi|86140826|ref|ZP_01059385.1| cyclic nucleotide-binding domain (cNMP-BD) protein
[Leeuwenhoekiella blandensis MED217]
gi|85832768|gb|EAQ51217.1| cyclic nucleotide-binding domain (cNMP-BD) protein
[Leeuwenhoekiella blandensis MED217]
Length = 634
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
++ I D+ KA+ + L C+ D T+ A K M+ +VG++VV E+K V GIIT
Sbjct: 160 NSEIFDLQKAR---YSKNILTCSPDTTIKVAAKKMSHRDVGSIVVTH--EEKPV-GIITN 213
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD LR I G S V IM++ V
Sbjct: 214 RD-LRDRIATGDFDISDSVDKIMSKPV 239
>gi|56419625|ref|YP_146943.1| hypothetical protein GK1090 [Geobacillus kaustophilus HTA426]
gi|56379467|dbj|BAD75375.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 141
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+A M NVGA+ ++ G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEAAVKMRDFNVGAIPIIDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEEV 139
V ++M+ ++
Sbjct: 67 AVTEVMSRDL 76
>gi|423699738|ref|ZP_17674228.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase, DUF294 family protein
[Pseudomonas fluorescens Q8r1-96]
gi|387996751|gb|EIK58081.1| cyclic nucleotide-binding domain/CBS domain pair/putative
nucleotidyltransferase, DUF294 family protein
[Pseudomonas fluorescens Q8r1-96]
Length = 644
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D + +AVK M VG++VVV EQK+ GI T RD LR+++ G S +
Sbjct: 190 CSPDTPLREAVKLMHDQQVGSIVVVN--EQKAPVGIFTLRD-LRQVVADGSGDFSQAIVG 246
Query: 134 IMTE 137
MT+
Sbjct: 247 HMTQ 250
>gi|323499175|ref|ZP_08104153.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
gi|323315808|gb|EGA68841.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
Length = 629
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
++R S+ E++ ++ + +L + D S +++ +A M + NV +
Sbjct: 131 NARLRQAVSSTNEQNDLTTSKVRTLLTGEAPYIDQS-------ESIQNAAIKMAEENVSS 183
Query: 95 LVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L+++ P + + GIIT+RD +++ QG S V +MT EV
Sbjct: 184 LLIINPDVLEDDEDDHSPLVGIITDRDLCTRVLAQGLDP-SDNVSSVMTTEV 234
>gi|388602252|ref|ZP_10160648.1| hypothetical protein VcamD_20458 [Vibrio campbellii DS40M4]
Length = 629
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
T+ +A + M Q NV +L++V P Q V GIIT+RD +++ +G S +V
Sbjct: 168 TIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDLCTRVLAEGLSPLD-EV 226
Query: 132 GDIMTEEV 139
+MT EV
Sbjct: 227 STVMTTEV 234
>gi|443633473|ref|ZP_21117651.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347207|gb|ELS61266.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 140
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVG + VV EQ ++ G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGVIPVV---EQGALKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ ++
Sbjct: 71 VMSTDL 76
>gi|395007947|ref|ZP_10391641.1| CBS domain-containing protein [Acidovorax sp. CF316]
gi|394314053|gb|EJE51005.1| CBS domain-containing protein [Acidovorax sp. CF316]
Length = 149
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A ++M + NVGA+ V E + G++T+RD + +++ Q R++ +T++ D+M+
Sbjct: 19 DNVLLAAQAMEELNVGAIPVC---EGDRLVGMVTDRDIVLRLVAQERNAGTTQLKDVMST 75
Query: 138 EV 139
+V
Sbjct: 76 DV 77
>gi|307609537|emb|CBW99035.1| hypothetical protein LPW_08201 [Legionella pneumophila 130b]
Length = 144
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ DD+V + +K M + ++GALVV + GI++ERD LR + S ++ KV
Sbjct: 18 YIHPDDSVKECIKQMVEKDIGALVVF--DNDARLIGIVSERDILRCYFHKNLSLETAKVS 75
Query: 133 DIMTEEV 139
D++ V
Sbjct: 76 DVVYTNV 82
>gi|399888963|ref|ZP_10774840.1| hypothetical protein CarbS_10612 [Clostridium arbusti SL206]
Length = 142
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +HN+G++ V + GE+ V G+IT+RD + + G ++K V +IM+
Sbjct: 17 NDTVERAAQLMVEHNIGSIPVCR-GEK--VVGVITDRDITLRSVANGENAKVQTVKEIMS 73
>gi|429192943|ref|YP_007178621.1| hypothetical protein Natgr_3038 [Natronobacterium gregoryi SP2]
gi|448326790|ref|ZP_21516134.1| signal transduction protein with CBS domains [Natronobacterium
gregoryi SP2]
gi|429137161|gb|AFZ74172.1| putative transcriptional regulator, contains C-terminal CBS domains
[Natronobacterium gregoryi SP2]
gi|445609841|gb|ELY63627.1| signal transduction protein with CBS domains [Natronobacterium
gregoryi SP2]
Length = 140
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ TTD+++ + +M NVG+ VV+ G++ AGI+T+RD ++I +G S+
Sbjct: 12 VTATTDESIQEIAATMAAENVGS-VVITDGDEP--AGIVTDRDLTLQVIAEGESADGMTA 68
Query: 132 GDIMTEEV 139
D+M+ ++
Sbjct: 69 EDVMSTDL 76
>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
HF4000_APKG1C9]
Length = 147
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C + ++ DA + M ++ G + VV ++ + G+IT+RD + + +G S++ T+VG
Sbjct: 13 CCKENQSLQDAARLMIDNDCGQIPVVD--DEGGLVGVITDRDVCCRAVAEGMSAE-TRVG 69
Query: 133 DIMTEEV 139
D+MT V
Sbjct: 70 DVMTRSV 76
>gi|307942056|ref|ZP_07657407.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
gi|307774342|gb|EFO33552.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
Length = 173
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 66 GADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRS 125
G G + +++++AV + + +GAL+V G+ +AGI++ERD +R++
Sbjct: 40 GKQGDVFSISPSNSLHEAVVMLREKGIGALIV--KGDDGKLAGILSERDIVRRLADTPGQ 97
Query: 126 SKSTKVGDIMTEEV 139
+ KV DIMT+ V
Sbjct: 98 TLGQKVEDIMTKSV 111
>gi|158314271|ref|YP_001506779.1| signal-transduction protein [Frankia sp. EAN1pec]
gi|158109676|gb|ABW11873.1| putative signal-transduction protein with CBS domains [Frankia sp.
EAN1pec]
Length = 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+ K D+++ A + M VGAL + G + GIIT+R
Sbjct: 2 TTARDIMHGDAK-------CVGADESLASAARMMRDLGVGALPIC--GADDRLGGIITDR 52
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + + +GR ST+ GD+
Sbjct: 53 DIVINCVAEGRDPASTRAGDL 73
>gi|294083597|ref|YP_003550354.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663169|gb|ADE38270.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 313
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 21/114 (18%)
Query: 39 ESVSSARMEEHGFESTTISDILKAKGKGADGSWL--------------WCTTDDTVYDAV 84
++++ A ME+ GFE+ +D GA G L + D +V DA+
Sbjct: 165 DALAVALMEKRGFEA---ADFAATHPGGALGRRLLTHVRDRMRVDNLPFVDADSSVQDAL 221
Query: 85 KSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+MT+ +G +V P + + GI+T+ D LR+++V G +VGD+ + +
Sbjct: 222 MTMTEGRLGLTLVGTP---EKLDGILTDGD-LRRLLVSGADLAGARVGDVASAD 271
>gi|239814685|ref|YP_002943595.1| CBS domain containing protein [Variovorax paradoxus S110]
gi|239801262|gb|ACS18329.1| CBS domain containing protein [Variovorax paradoxus S110]
Length = 146
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL+ KG + T DD + +AVK+M + ++G+LVV++ G+ + G++T R+
Sbjct: 3 VSDILRVKG----NTLFTITPDDLLAEAVKTMAEKDIGSLVVMEHGD---LVGMLTFREV 55
Query: 116 LRKIIVQG 123
+ I+ G
Sbjct: 56 ILAIVDNG 63
>gi|153835335|ref|ZP_01988002.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
gi|156974174|ref|YP_001445081.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
gi|148868149|gb|EDL67306.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
gi|156525768|gb|ABU70854.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
Length = 629
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
T+ +A + M Q NV +L++V P Q V GIIT+RD +++ +G S +V
Sbjct: 168 TIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDLCTRVLAEGLSPLD-EV 226
Query: 132 GDIMTEEV 139
+MT EV
Sbjct: 227 STVMTTEV 234
>gi|148272051|ref|YP_001221612.1| putative cystathionine beta-synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829981|emb|CAN00909.1| putative cystathionine beta-synthase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 454
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 46 MEEHGFEST----TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV--- 98
M+ +GF T++D++ AK G+ + +DT+ DA++ MT+++V L V+
Sbjct: 311 MQSYGFARVNGQRTVADVMSAK-TGSLPDLVHAHPNDTIRDAIRIMTEYDVSQLPVLTAE 369
Query: 99 KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
P VAG + ER L +++ GR+ S +VG
Sbjct: 370 PPVVMGEVAGAVDERSLL-ELVFSGRAQLSDQVG 402
>gi|54022043|ref|YP_116285.1| hypothetical protein nfa790 [Nocardia farcinica IFM 10152]
gi|54013551|dbj|BAD54921.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 156
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
TT DI+K + W + DTV A + M VG+LVV E + + GI+T+R
Sbjct: 19 TTARDIMKPGAQ-------WISKQDTVERAAQLMADLGVGSLVVAD--ENERMCGIVTDR 69
Query: 114 DYLRKIIVQGRSSKSTKVGDI 134
D + K + G + +T ++
Sbjct: 70 DIVVKCVAHGANPATTPAAEL 90
>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
[Corynebacterium ammoniagenes DSM 20306]
Length = 618
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
ST I D+ AK + C D ++ +A + M ++NV +L+V+ ++ ++ GIIT+
Sbjct: 151 STHIHDVKIAKPRS-------CPPDLSIREAAQRMEEYNVSSLLVL---DRDTLLGIITD 200
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
RD +++ +G + + V D+MT
Sbjct: 201 RDLRGRVVAEGIET-TCPVSDVMT 223
>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
Length = 144
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK K AD S + +A K +++ +G LV+ G K+ GI++ERD
Sbjct: 3 VSQILKTK---ADDSVTTVKPGVLISEAAKMLSEKRIGTLVICSDG--KTPDGILSERDI 57
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + VQG + + V +MT+E+
Sbjct: 58 VRALGVQGDACLNMTVESLMTKEL 81
>gi|429768375|ref|ZP_19300535.1| CBS domain protein [Brevundimonas diminuta 470-4]
gi|429189202|gb|EKY30045.1| CBS domain protein [Brevundimonas diminuta 470-4]
Length = 142
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+++ILK KG G+ D + +A + + VGAL+V E V G+++ERD
Sbjct: 3 VAEILKGKG----GAVFTLAPDANLNEACAELERRQVGALIVC---EGDGVVGVLSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R I G + V MT EV
Sbjct: 56 VRAISRDGTQALERPVSHYMTSEV 79
>gi|145223257|ref|YP_001133935.1| signal-transduction protein [Mycobacterium gilvum PYR-GCK]
gi|315443717|ref|YP_004076596.1| signal-transduction protein containing cAMP-binding and CBS domains
[Mycobacterium gilvum Spyr1]
gi|145215743|gb|ABP45147.1| putative signal-transduction protein with CBS domains
[Mycobacterium gilvum PYR-GCK]
gi|315262020|gb|ADT98761.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Mycobacterium gilvum Spyr1]
Length = 142
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
ISD+L++KG + T + +V + ++ N+GA+VVV P + GI++ERD
Sbjct: 3 ISDVLRSKG----AAVATITPETSVAGLLTELSVRNIGAMVVVSP---DGLQGIVSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+RK+ G V +IMT V
Sbjct: 56 VRKLHDMGADLLRRPVSEIMTTLV 79
>gi|167647687|ref|YP_001685350.1| signal-transduction protein [Caulobacter sp. K31]
gi|167350117|gb|ABZ72852.1| putative signal-transduction protein with CBS domains [Caulobacter
sp. K31]
Length = 143
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+S ILK KG + ++TV A + VGA+VV++ E +++AGI++ERD
Sbjct: 3 VSQILKDKGD----LVFTASPNETVGAAAALLHTRRVGAMVVLE--EDETIAGILSERDI 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R I +G + S + MT +V
Sbjct: 57 VRVIAKEGAGALSKPISSCMTRDV 80
>gi|14520325|ref|NP_125800.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
GE5]
gi|5457540|emb|CAB49031.1| guaB-like2 inosine-5'-monophosphate dehydrogenase related
[Pyrococcus abyssi GE5]
gi|380740849|tpe|CCE69483.1| TPA: inosine-5'-monophosphate dehydrogenase related [Pyrococcus
abyssi GE5]
Length = 136
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ D TV +A K M + +VG+LVVV ++ +V G T+ D +R++IV G S
Sbjct: 15 LMGVKPDTTVQEASKLMMEFDVGSLVVV--DDEGNVVGFFTKSDIIRRVIVPGLSY-DIP 71
Query: 131 VGDIMTEEV 139
V +IMT+E+
Sbjct: 72 VKEIMTKEL 80
>gi|335423773|ref|ZP_08552793.1| isocitrate dehydrogenase, NADP-dependent [Salinisphaera shabanensis
E1L3A]
gi|334891236|gb|EGM29491.1| isocitrate dehydrogenase, NADP-dependent [Salinisphaera shabanensis
E1L3A]
Length = 589
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 25/117 (21%)
Query: 24 RLVNPMLRPVVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDT-VYD 82
RL+ PM + S R T++SD++ L TDDT V+D
Sbjct: 442 RLLQPMEEMIASGR--------------TPTSVSDVMTRT--------LITVTDDTSVHD 479
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
A+ M ++ V +LVV +P + GI+T RD + KI+ +G+S VG+I + V
Sbjct: 480 AMHEMRKNEVSSLVV-EPNDSGE-WGIMTRRDIVTKIVREGKSPTDITVGEIASRPV 534
>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
Length = 144
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TV DA K +++H +G +VV GE ++ GI++ERD +R++ +G + V D+MT +
Sbjct: 23 TVTDAAKLLSKHRIGTVVVSADGE--TLDGILSERDIVRELGKRGMGCLNDPVRDLMTAK 80
Query: 139 V 139
+
Sbjct: 81 L 81
>gi|206890300|ref|YP_002249164.1| CBS domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742238|gb|ACI21295.1| CBS domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 133
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
TVYDA++ + + +L+V+ P ++K V G+IT RD + K++ Q KV +I ++
Sbjct: 21 TVYDAIEKLVDKRMRSLIVI-PKDEKDVYGVITVRDIVFKVVAQHLDPHKIKVEEIASKP 79
Query: 139 V 139
V
Sbjct: 80 V 80
>gi|408826341|ref|ZP_11211231.1| hypothetical protein SsomD4_04078 [Streptomyces somaliensis DSM
40738]
Length = 139
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
W +T+ A + M +HNVGAL + E+ + GI+T+RD + K + G+ G
Sbjct: 14 WIPAHETLDAAARLMREHNVGALPIADGDER--LCGIVTDRDIVVKCVAAGQDPSRVTCG 71
Query: 133 DI 134
D+
Sbjct: 72 DV 73
>gi|339484277|ref|YP_004696063.1| signal transduction protein with CBS domains [Nitrosomonas sp.
Is79A3]
gi|338806422|gb|AEJ02664.1| putative signal transduction protein with CBS domains [Nitrosomonas
sp. Is79A3]
Length = 149
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSV-AGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+TV +A K M Q++VGA++V + ++ GI+T+RD + +++ VGDIM
Sbjct: 17 DETVLEAAKLMRQYHVGAVIVTDKLDGRTAPVGIVTDRDLVVEVLATELDETVITVGDIM 76
Query: 136 TEEV 139
EV
Sbjct: 77 APEV 80
>gi|270159831|ref|ZP_06188487.1| CBS domain-containing protein [Legionella longbeachae D-4968]
gi|289165411|ref|YP_003455549.1| hypothetical protein LLO_2078 [Legionella longbeachae NSW150]
gi|269988170|gb|EEZ94425.1| CBS domain-containing protein [Legionella longbeachae D-4968]
gi|288858584|emb|CBJ12465.1| putative conserved hypothetical protein [Legionella longbeachae
NSW150]
Length = 146
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++ +D+V + M++ ++GALVVV Q + GI++ERD +R + + + ++ KV
Sbjct: 17 IYIHPEDSVIKCINLMSEMDIGALVVVDNDNQ--LIGIVSERDIVRSCLHKCVNLETAKV 74
Query: 132 GDIMTEEV 139
D++ +EV
Sbjct: 75 SDVVYKEV 82
>gi|9188545|dbj|BAA99562.1| inosine-5'-monophosphate dehydrogenase [Chlorella vulgaris]
Length = 182
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 105 SVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V GI+TERDYL K++V+ +SSK V IMT++
Sbjct: 6 AVVGIVTERDYLTKVVVKDQSSKDLAVSQIMTDK 39
>gi|170780583|ref|YP_001708915.1| cystathionine beta-synthase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155151|emb|CAQ00251.1| putative cystathionine beta-synthase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 454
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 46 MEEHGFEST----TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVV--- 98
M+ +GF T++D++ AK G+ + +DT+ DA++ MT+++V L V+
Sbjct: 311 MQSYGFARVNGQRTVADVMSAK-TGSLPDLVHAHPNDTIRDAIRIMTEYDVSQLPVLSAE 369
Query: 99 KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
P VAG + ER L +++ GR+ S +VG
Sbjct: 370 PPVVMGEVAGAVDERSLL-ELVFSGRAQLSDQVG 402
>gi|330812206|ref|YP_004356668.1| hypothetical protein PSEBR_a5190 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380314|gb|AEA71664.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 504
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D + +AVK M VG++VVV EQK+ GI T RD LR+++ G S +
Sbjct: 192 CSPDTPLREAVKLMHDQQVGSIVVVN--EQKAPVGIFTLRD-LRQVVADGSGDFSQAIVG 248
Query: 134 IMTE 137
MT+
Sbjct: 249 HMTQ 252
>gi|300853495|ref|YP_003778479.1| hypothetical protein CLJU_c02930 [Clostridium ljungdahlii DSM
13528]
gi|300433610|gb|ADK13377.1| conserved hypothetical protein containing CBS domain [Clostridium
ljungdahlii DSM 13528]
Length = 142
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + DDTV A + M Q+N+GA+ V K G+ V GI+T+RD + Q ++S
Sbjct: 10 SVISLNDDDTVEKAAQIMQQNNIGAVPVCKNGK---VIGIVTDRDIAIRSASQSGGTESK 66
Query: 130 KVGDIMT 136
V DIM+
Sbjct: 67 FVRDIMS 73
>gi|429216754|ref|YP_007174744.1| transcriptional regulator [Caldisphaera lagunensis DSM 15908]
gi|429133283|gb|AFZ70295.1| putative transcriptional regulator containing CBS domains
[Caldisphaera lagunensis DSM 15908]
Length = 147
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D V A++ M + +GA+ V+ E + GI TERD L K++V+ + + + D+MT+
Sbjct: 26 DNVSKAIQVMNETGIGAVAVID--EHGKIIGIFTERDLLNKVLVKNKKLEEVIIEDVMTK 83
>gi|408828402|ref|ZP_11213292.1| signal-transduction protein with CBS domain [Streptomyces
somaliensis DSM 40738]
Length = 131
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D+TV +A K MT+ VGAL + G + G++T+RD + K++ +G+ K G++
Sbjct: 11 DETVLEAAKKMTELGVGALPIC--GTDNRLKGMLTDRDIVVKVLGKGKDPAECKAGEL 66
>gi|333910613|ref|YP_004484346.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751202|gb|AEF96281.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 176
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T+ TVYD M + +G +VVV+ + GI+TERD + I+ + K V DIM
Sbjct: 16 TNTTVYDVANIMKEKKIGCVVVVEKDSKP--LGIVTERDLVINIVAKNLKPKDVLVKDIM 73
Query: 136 T 136
T
Sbjct: 74 T 74
>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
alaskensis RB2256]
Length = 141
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 65 KGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGR 124
+G GS + DDTV + Q+ +GA+ VV + +V GI +ERD +R I G
Sbjct: 8 RGRTGSVISAQPDDTVRAVADLLAQNRIGAVPVV---DGDAVVGIFSERDIVRLISSYGP 64
Query: 125 SSKSTKVGDIMTE 137
+ ++ D+MT+
Sbjct: 65 EALDRRIDDVMTK 77
>gi|301087197|gb|ADK60815.1| unknown, partial [Arachis diogoi]
Length = 27
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 1 MQGAIQSFLSHGNIVKSAVLQRIR 24
MQG +S LSHGN+VKSA+LQR+R
Sbjct: 4 MQGGFRSILSHGNVVKSAILQRMR 27
>gi|325970898|ref|YP_004247089.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 147
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ IL KGK + DD + A+ +T+H +GAL+V+ EQ + GI++ERD
Sbjct: 3 NVQTILDQKGK----LVISIGPDDALSHALLKLTEHKIGALLVL--NEQGDIKGILSERD 56
Query: 115 YLRKII--VQGRSSKSTKVGDIMT 136
+R ++ ++ S KV ++MT
Sbjct: 57 IIRHFSKRLEHLNTASIKVREVMT 80
>gi|254228314|ref|ZP_04921741.1| cyclic nucleotide binding protein [Vibrio sp. Ex25]
gi|262394379|ref|YP_003286233.1| Signal transduction protein [Vibrio sp. Ex25]
gi|151939120|gb|EDN57951.1| cyclic nucleotide binding protein [Vibrio sp. Ex25]
gi|262337973|gb|ACY51768.1| Signal transduction protein [Vibrio sp. Ex25]
Length = 626
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S+R S S+R E + F + IL D L T ++ +A M + NV +
Sbjct: 131 SARLRSAISSRSESNDFTTAKARKIL-----ARDPVTLEATA--SIQEAAILMAEENVTS 183
Query: 95 LVVVKPGEQ------KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L++V+P E+ + + GI+T+RD +++ QG + + V ++M+ +V
Sbjct: 184 LLIVRPAEELTEEDDEQLLGILTDRDLCIRVLAQGIDT-NIPVSEVMSYDV 233
>gi|451971826|ref|ZP_21925041.1| cyclic nucleotide binding protein [Vibrio alginolyticus E0666]
gi|451932184|gb|EMD79863.1| cyclic nucleotide binding protein [Vibrio alginolyticus E0666]
Length = 626
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S+R S S+R E + F + IL D L T ++ +A M + NV +
Sbjct: 131 SARLRSAISSRSESNDFTTAKARKIL-----ARDPVTLEATA--SIQEAAILMAEENVTS 183
Query: 95 LVVVKPGEQ------KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L++V+P E+ + + GI+T+RD +++ QG + + V ++M+ +V
Sbjct: 184 LLIVRPAEELTEEDDEQLLGILTDRDLCIRVLAQGIDT-NIPVSEVMSYDV 233
>gi|212223889|ref|YP_002307125.1| hypothetical protein TON_0740 [Thermococcus onnurineus NA1]
gi|212008846|gb|ACJ16228.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 135
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DDTV A + M + ++G+LVVV G+ V G T+ D +R++++ G + +T V +IM+
Sbjct: 21 DDTVKRACEVMVEFDIGSLVVVDKGK---VIGFFTKSDVIRRVVIPGLPN-TTPVREIMS 76
Query: 137 EEV 139
E+
Sbjct: 77 SEL 79
>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
proteobacterium BAL199]
Length = 142
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK+KG + V DA + + + +G+++++ E+ VAGI++ERD
Sbjct: 3 VSDILKSKGSAV----VTAPPSMPVADAARLLAEKRIGSILIL---ERNKVAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G V +MT +V
Sbjct: 56 VRALANEGAGCLDGPVSRLMTAKV 79
>gi|254450613|ref|ZP_05064050.1| CBS domain pair protein [Octadecabacter arcticus 238]
gi|198265019|gb|EDY89289.1| CBS domain pair protein [Octadecabacter arcticus 238]
Length = 141
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 87 MTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
M++ N GA+VV+ K V G+ TERD + K++ Q ++ T V +IMT++
Sbjct: 1 MSEKNYGAVVVID--ADKKVLGVATERDVMNKLVAQELDARKTAVSEIMTKD 50
>gi|452752736|ref|ZP_21952477.1| CBS domain protein [alpha proteobacterium JLT2015]
gi|451960127|gb|EMD82542.1| CBS domain protein [alpha proteobacterium JLT2015]
Length = 118
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 84 VKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
++++ +H +GA++V++ G+Q +AG+++ERD +R + QG ++ S D+MT +V
Sbjct: 3 IETLVEHRIGAVLVLE-GDQ--IAGVLSERDIVRCLAEQGEAALSKCASDLMTADV 55
>gi|440232680|ref|YP_007346473.1| KpsF/GutQ family protein [Serratia marcescens FGI94]
gi|440054385|gb|AGB84288.1| KpsF/GutQ family protein [Serratia marcescens FGI94]
Length = 328
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D T+ DA+ +T+ N+G V+ EQ +AGI T+ D LR+I G S K+ D+
Sbjct: 220 SADATLRDALLEITRKNLGMTVICD--EQMHIAGIFTDGD-LRRIFDLGIDLNSAKIADV 276
Query: 135 MT 136
MT
Sbjct: 277 MT 278
>gi|336475979|ref|YP_004615120.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
gi|335929360|gb|AEH59901.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
Length = 333
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKII 120
+W ++D + +A M + NVG+L V G+ + GIITERD+LR II
Sbjct: 287 VWISSDMDLGEAASLMIEKNVGSLPVFDDGK---LCGIITERDFLRAII 332
>gi|144900700|emb|CAM77564.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
Length = 131
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T+S IL+ KG + + D ++ + + + NVG LV V + S+ GII+ERD
Sbjct: 2 TVSKILEKKGAQVHTTHM----DVSLRQIIHKLNEANVGILVCVDAFD--SIVGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R I G + S V MT +V
Sbjct: 56 VVRSIARHGDEALSMPVSTFMTRDV 80
>gi|291614479|ref|YP_003524636.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
gi|291584591|gb|ADE12249.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
Length = 143
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL K K + DDTV+ A+ M + ++GA++VV EQ + G+ TERD
Sbjct: 3 TIAQILAEKTK----PLTTVSPDDTVHYALVLMRERDIGAVMVV---EQGKLIGVFTERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
L K+ + K V ++M+ +V
Sbjct: 56 CLHKVSSLCLNPKEVLVREVMSTKV 80
>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
Length = 278
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
DTV AV++M + VGAL +VK K + GIITERD + + + T+V +IMTE
Sbjct: 100 DTVRKAVRTMFEFEVGALPIVK---DKKLVGIITERDIMADLY---DVLEDTRVEEIMTE 153
Query: 138 E 138
+
Sbjct: 154 D 154
>gi|344232849|gb|EGV64722.1| hypothetical protein CANTEDRAFT_104365 [Candida tenuis ATCC 10573]
Length = 619
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++C+ TVY+A M ++N A V+VK E K V GI T +D + ++I G + K+ +
Sbjct: 253 IYCSIKTTVYEATVLMKENNTTA-VLVKDNEDK-VNGIFTSKDVVLRVIAAGLTPKNCSI 310
Query: 132 GDIMTEE 138
+MT +
Sbjct: 311 VRVMTPQ 317
>gi|443326955|ref|ZP_21055593.1| CBS domain-containing protein [Xenococcus sp. PCC 7305]
gi|442793453|gb|ELS02902.1| CBS domain-containing protein [Xenococcus sp. PCC 7305]
Length = 205
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
TV DAVK M + + AL+V +P + GI+TE D + K+ G K +V +IMT+
Sbjct: 20 TVADAVKVMKEKGLRALIV-EPRSDRDPYGIVTETDVIYKVAAYGNDPKKMRVFEIMTK 77
>gi|256810527|ref|YP_003127896.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256793727|gb|ACV24396.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 297
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKS 128
+ L D+ +YDA+K M ++NVG LV+V + + GIIT D L+ I+ G+ +S
Sbjct: 239 NVLTIHKDEKIYDALKIMNKNNVGRLVIVD--DNNKIVGIITRTDILK--IISGKFPRS 293
>gi|260772907|ref|ZP_05881823.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
gi|260612046|gb|EEX37249.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
Length = 629
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
++R S E++ ++ + +L + + D ++ A M++ NV +
Sbjct: 131 NARLRQTVSNTQEQNDLTTSKVKHLLTREAP-------FVYNDASIQQAAIKMSEENVSS 183
Query: 95 LVVVKPGEQKS-------VAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L+++ P K V GI+T+RD R++I G S V ++MT EV
Sbjct: 184 LLIIDPSIMKDNEDDSSPVVGILTDRDLCRRVIATGLDF-SHSVTEVMTSEV 234
>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
hospitalis KIN4/I]
Length = 138
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L + D++V D K M +H G+ +V+ E + GI+TERD L + +G K
Sbjct: 20 LVVSPDESVVDVAKKMLEHGYGSALVI---EDDKLIGIVTERDLLYA-LSEGEEGVKLKA 75
Query: 132 GDIMTEE 138
D+MTE+
Sbjct: 76 SDVMTED 82
>gi|422306129|ref|ZP_16393315.1| CBS domain protein [Vibrio cholerae CP1035(8)]
gi|408627369|gb|EKL00182.1| CBS domain protein [Vibrio cholerae CP1035(8)]
Length = 626
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S+R S S+R E + F + IL D L T ++ +A M + NV +
Sbjct: 131 SARLRSAISSRSERNDFTTAKARKIL-----ARDPVTLEATA--SIQEAAILMAEENVTS 183
Query: 95 LVVVKPGEQ------KSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L++V+P E+ + + GI+T+RD +++ QG + + V ++M+ +V
Sbjct: 184 LLIVRPAEELTEEDDEQLLGILTDRDLCIRVLAQGIDT-NIPVSEVMSYDV 233
>gi|402847981|ref|ZP_10896249.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501776|gb|EJW13420.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 144
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
++D+LK K G + DTV + + + Q VG ++V + G +SV GI++ERD
Sbjct: 3 VADLLKGKSPGV----MTVQPTDTVAELAERLRQARVGVMIVSRDG--RSVDGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ G + +V D+MT+ V
Sbjct: 57 AYGLAEHGETLPVLQVSDVMTKAV 80
>gi|169824006|ref|YP_001691617.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
gi|303234329|ref|ZP_07320968.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
gi|417925605|ref|ZP_12569024.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
SY403409CC001050417]
gi|167830811|dbj|BAG07727.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
gi|302494445|gb|EFL54212.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
gi|341591231|gb|EGS34439.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
SY403409CC001050417]
Length = 483
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 9 LSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHG-----FESTTIS------ 57
L + I+K+ + ++I L PM+ + + ES + M G ++ TI
Sbjct: 23 LPNETILKTRLTKKIELNIPMMSAGMDTVTESKMAIAMARQGGIGIIHKNMTIEEQAREV 82
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K G + + DD + DA+K M+ + + + +VK E ++ GI+T RD
Sbjct: 83 DRVKRSENGIITDPFYLSADDKIVDALKLMSHYRISGVPIVK--EDMTLVGILTNRD--- 137
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
V+ + +GD+MT++
Sbjct: 138 ---VRFVKDEQLPIGDVMTKD 155
>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
Length = 173
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ T+ ++ KG+ S T DDT+ AVK + ++GAL+V ++ GI++
Sbjct: 30 ENATVRKLIDHKGR----SVFSITPDDTLSTAVKVLADKHIGALLVTD--ADGALVGILS 83
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERD +RK+ + V + MT+ V
Sbjct: 84 ERDIVRKLAATPGQTLPQTVAENMTKNV 111
>gi|320161875|ref|YP_004175100.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
gi|319995729|dbj|BAJ64500.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
Length = 148
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 56 ISDILKAKGKGADGSWLWCTT-DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
+ DILK KG + +W + DDT+ + + + NVGAL+V+ GE+ +AGI++ERD
Sbjct: 5 VEDILKEKG-----NQIWSVSPDDTLLTTLLKLAEKNVGALLVMD-GER--IAGIVSERD 56
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R+I + + MTE+V
Sbjct: 57 IVREIALHRACVLDAPIKAFMTEDV 81
>gi|149375574|ref|ZP_01893344.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
gi|149360279|gb|EDM48733.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
algicola DG893]
Length = 624
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 82 DAVKSMTQHNVGALVVV-KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+A + MT+ V AL+++ + G+Q ++GIIT+RD + + + S+ T + DIMTEE+
Sbjct: 171 EAARIMTERGVSALLLMDESGKQPRLSGIITDRDLRTRALCEALPSE-TPISDIMTEEL 228
>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 174
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 32 PVVSSRFESVSSARMEEHGFEST--TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQ 89
P + ES + ++ E T T++ +L+ KG+ + DDT++ V+ +
Sbjct: 9 PTRGDKPESATYSQSVESNLSQTQSTVAKLLEGKGE----DVIAVRPDDTIHTVVQILKD 64
Query: 90 HNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+GA+VV + ++ GI++ERD +R++ + V D+MT EV
Sbjct: 65 KRIGAVVVTD--QNGALQGILSERDIVRRMADTPGQTLPQSVQDLMTREV 112
>gi|51244818|ref|YP_064702.1| hypothetical protein DP0966 [Desulfotalea psychrophila LSv54]
gi|50875855|emb|CAG35695.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 625
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPG----EQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
D T+ A ++M NV A+++ P + + AGIIT+RD +++ +G SS T V
Sbjct: 166 DQTIQQAARTMAAENVSAILISPPENTSEDDEPFAGIITDRDLCSRVLAEGVSS-DTAVS 224
Query: 133 DIMTEEV 139
+M+ ++
Sbjct: 225 KVMSTDL 231
>gi|375099615|ref|ZP_09745878.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora cyanea NA-134]
gi|374660347|gb|EHR60225.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Saccharomonospora cyanea NA-134]
Length = 138
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T +TV A ++M VGAL + GE + G++T+RD + K++ +G+ + VG
Sbjct: 14 YAETSETVTHAARTMAGEGVGALPIR--GEDHKLKGMLTDRDIVVKVLAEGKDPVAVHVG 71
Query: 133 DIMTEEV 139
++ EV
Sbjct: 72 ELAQGEV 78
>gi|407783415|ref|ZP_11130616.1| signal-transduction protein [Oceanibaculum indicum P24]
gi|407202140|gb|EKE72135.1| signal-transduction protein [Oceanibaculum indicum P24]
Length = 142
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDILK KG + V DA K + + +G+++V+ +++ +AGI++ERD
Sbjct: 3 VSDILKTKG----ADVVAVPPSLPVSDAAKLLAEKRIGSVLVM---DREKIAGILSERDI 55
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + +G + V +MT +V
Sbjct: 56 VRTLAAEGAACLDGPVSRLMTAKV 79
>gi|341581333|ref|YP_004761825.1| hypothetical protein GQS_01225 [Thermococcus sp. 4557]
gi|340808991|gb|AEK72148.1| hypothetical protein GQS_01225 [Thermococcus sp. 4557]
Length = 136
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ + +D+V A + M + ++G+LVVV E+ V G T+ D +R++++ G S+ T
Sbjct: 16 LIGVSPNDSVKRACEVMVEFDIGSLVVV---EENRVVGFFTKSDIIRRVVIPGLSN-GTP 71
Query: 131 VGDIMTEEV 139
V +IM+ E+
Sbjct: 72 VREIMSREL 80
>gi|427426776|ref|ZP_18916822.1| CBS domain protein [Caenispirillum salinarum AK4]
gi|425884140|gb|EKV32814.1| CBS domain protein [Caenispirillum salinarum AK4]
Length = 145
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TIS IL KG + + TV +A+K+M + + ALV+ G + + GI+++R
Sbjct: 2 TISKILSQKGTAVHTA----RSTMTVEEAIKTMWELEISALVICDDG--RRIDGIVSDRG 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + QG + DIMT EV
Sbjct: 56 IIRALASQGTEIMGRPIADIMTREV 80
>gi|374587676|ref|ZP_09660768.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Leptonema illini DSM 21528]
gi|373876537|gb|EHQ08531.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Leptonema illini DSM 21528]
Length = 642
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C D V DA K MT+H VG+++V+ +++ GIIT+ D +RK + G S++ +
Sbjct: 178 CRPDMLVSDAAKIMTEHRVGSIMVLD--DRQYPLGIITDSD-MRKKVATGLFPISSRTDE 234
Query: 134 IMTEEV 139
IM+ V
Sbjct: 235 IMSSPV 240
>gi|114798278|ref|YP_761342.1| hypothetical protein HNE_2660 [Hyphomonas neptunium ATCC 15444]
gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
Length = 144
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKP-GEQKSVAGIITERD 114
I IL KG+ + DDT+ +A + + + +GA+V + GE + G+++ERD
Sbjct: 3 IEQILNDKGR----EVITLRADDTLREAARLLDERRIGAVVTLDADGE---IVGVLSERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R+ QG + VG+ MT V
Sbjct: 56 IVRQFARQGEGALDMPVGNAMTRAV 80
>gi|348618498|ref|ZP_08885022.1| conserved hypothetical protein [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816223|emb|CCD29778.1| conserved hypothetical protein [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 156
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M NVG++VVV Q+ GI+T+RD + +++ + S V DIM+
Sbjct: 25 EDSVQKAAQKMRDRNVGSIVVVNA--QQHPVGIVTDRDIVVQVVAKSADPSSQTVADIMS 82
Query: 137 EEV 139
++
Sbjct: 83 RDL 85
>gi|302380044|ref|ZP_07268523.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
ACS-171-V-Col3]
gi|302312270|gb|EFK94272.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
ACS-171-V-Col3]
Length = 483
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 9 LSHGNIVKSAVLQRIRLVNPMLRPVVSSRFESVSSARMEEHG-----FESTTIS------ 57
L + I+K+ + ++I L PM+ + + ES + M G ++ TI
Sbjct: 23 LPNETILKTRLTKKIELNIPMMSAGMDTVTESKMAIAMARQGGIGIIHKNMTIEEQAREV 82
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K G + + DD + DA+K M+ + + + +VK E ++ GI+T RD
Sbjct: 83 DRVKRSENGIITDPFYLSADDKIVDALKLMSHYRISGVPIVK--EDMTLVGILTNRD--- 137
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
V+ + +GD+MT++
Sbjct: 138 ---VRFVKDEQLPIGDVMTKD 155
>gi|334345906|ref|YP_004554458.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
gi|334102528|gb|AEG49952.1| putative signal transduction protein with CBS domains [Sphingobium
chlorophenolicum L-1]
Length = 142
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL+ KG+ + + DTV V+ + Q +G + VV G V GI +ERD
Sbjct: 2 TIAAILQRKGQ----DVVQAQSSDTVLSVVRLLAQRRIGCVPVVDDGR---VVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
++ +G + VG+IMT
Sbjct: 55 LAYRVAQEGAAVLDRPVGEIMT 76
>gi|288931695|ref|YP_003435755.1| signal transduction protein with CBS domains [Ferroglobus placidus
DSM 10642]
gi|288893943|gb|ADC65480.1| putative signal transduction protein with CBS domains [Ferroglobus
placidus DSM 10642]
Length = 175
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D++V A + M + VG++VVV+ G GI+TE D +RK++ + + K+ +IMT
Sbjct: 21 DESVLKASRRMIEFGVGSIVVVENGRP---VGIVTESDIIRKVVARNKVPSEVKLEEIMT 77
>gi|145219711|ref|YP_001130420.1| cyclic nucleotide-binding protein [Chlorobium phaeovibrioides DSM
265]
gi|145205875|gb|ABP36918.1| cyclic nucleotide-binding protein [Chlorobium phaeovibrioides DSM
265]
Length = 649
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 70 SWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST 129
S + C D T+ +A K M N+G+++V P GIIT+ D +K++ +
Sbjct: 179 SVMTCPPDITIREAAKIMADCNIGSILVASPANHP--LGIITDTDLRKKVVAMAGAVNER 236
Query: 130 KVGDIMTEEV 139
V +IM+ V
Sbjct: 237 PVNEIMSSPV 246
>gi|410458308|ref|ZP_11312068.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
gi|409931490|gb|EKN68472.1| CBS domain-containing protein [Bacillus azotoformans LMG 9581]
Length = 140
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+CT D ++ M NVGA+ +V+ G ++ G+IT+RD + + I + RS S V
Sbjct: 14 YCTPVDNAFEVATKMKDLNVGAIPIVENG---NLLGMITDRDLVVRGIAEKRSG-SNAVT 69
Query: 133 DIMTEEV 139
++M++E+
Sbjct: 70 NLMSQEL 76
>gi|15615168|ref|NP_243471.1| hypothetical protein BH2605 [Bacillus halodurans C-125]
gi|10175226|dbj|BAB06324.1| BH2605 [Bacillus halodurans C-125]
Length = 142
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+C+ DD +++ M + NVGA+ + E++ + G++T+RD + + + + + + ST V
Sbjct: 14 YCSPDDNIFEVAVKMERDNVGAVPIC---EEEQLLGMVTDRDIVIRSVAKKKPN-STPVK 69
Query: 133 DIMTEEV 139
++M+E +
Sbjct: 70 EVMSEHL 76
>gi|443316025|ref|ZP_21045488.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Leptolyngbya sp. PCC 6406]
gi|442784372|gb|ELR94249.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Leptolyngbya sp. PCC 6406]
Length = 161
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
D +V A+ M + V +L+V +P +Q GIITERD + ++ +G + +V DIM
Sbjct: 38 DASVAMAIAQMQDYGVRSLIVERPSDQTPY-GIITERDIVYRVFARGLDPQRVRVHDIMR 96
Query: 137 EE 138
+
Sbjct: 97 QP 98
>gi|440783399|ref|ZP_20961117.1| hypothetical protein F502_13258 [Clostridium pasteurianum DSM 525]
gi|440219539|gb|ELP58751.1| hypothetical protein F502_13258 [Clostridium pasteurianum DSM 525]
Length = 142
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DT+ A + M +HN+G++ V + GE+ V GIIT+RD + + G ++K V ++M+
Sbjct: 17 EDTIERAAQLMREHNIGSIPVCR-GEK--VVGIITDRDITLRSVANGENAKVQTVKEVMS 73
>gi|424828149|ref|ZP_18252890.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
gi|365979632|gb|EHN15685.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
Length = 138
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY-LRKIIVQGRSSKSTKVGDIM 135
+D+V A M+++NVG+L + E V G+IT+RD LR V R + KVGDIM
Sbjct: 17 NDSVEKAAGLMSEYNVGSLPIC---ENNKVVGVITDRDIALRS--VAKREDNNIKVGDIM 71
Query: 136 T 136
T
Sbjct: 72 T 72
>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 78 DTVYDAVKSMTQHNVGALVVV---KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
DTV A K M + V + VV KPG GI+T RD L ++I Q +ST VG +
Sbjct: 245 DTVLTASKKMLELKVSSAVVAIENKPG------GILTSRDILMRVIAQNLPPESTTVGKV 298
Query: 135 MTE 137
MT+
Sbjct: 299 MTQ 301
>gi|419822896|ref|ZP_14346462.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus C89]
gi|388472983|gb|EIM09740.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus C89]
Length = 488
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNNEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT E
Sbjct: 145 FI-----SDYSMKISDVMTRE 160
>gi|408678549|ref|YP_006878376.1| Cystathionine beta-synthase [Streptomyces venezuelae ATCC 10712]
gi|328882878|emb|CCA56117.1| Cystathionine beta-synthase [Streptomyces venezuelae ATCC 10712]
Length = 463
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 46 MEEHGF----ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPG 101
M HGF S T++D+L+ K G S + D+TV A++ + ++ V + +VKPG
Sbjct: 311 MAGHGFLEDTSSATVADVLRHKEGGTMPSLVHMHPDETVGQAIEVLREYGVSQMPIVKPG 370
Query: 102 E------QKSVAGIITERDYLRKIIVQ 122
V G + ER+ L + Q
Sbjct: 371 AGHPDVMAAEVVGSVVERELLDALFTQ 397
>gi|385805337|ref|YP_005841735.1| inosine-5'-monophosphate dehydrogenase-like protein V
[Fervidicoccus fontis Kam940]
gi|383795200|gb|AFH42283.1| inosine-5'-monophosphate dehydrogenase related protein V
[Fervidicoccus fontis Kam940]
Length = 142
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 82 DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
+AV+ M ++N+G++VVV E+ + GI+TE+D + K+I K KV DIM+ V
Sbjct: 29 EAVRIMLENNIGSVVVV--NEKGVLIGILTEKDLITKVIKGKLDLKDLKVKDIMSAPV 84
>gi|441520960|ref|ZP_21002624.1| hypothetical protein GSI01S_10_01770 [Gordonia sihwensis NBRC
108236]
gi|441459532|dbj|GAC60585.1| hypothetical protein GSI01S_10_01770 [Gordonia sihwensis NBRC
108236]
Length = 142
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
IS IL KG G + TV + ++ + N+GA+VV+ G ++AGI++ERD
Sbjct: 3 ISQILSKKGSGV----ITVCAASTVRSLLATLDEWNIGAVVVIDEG--GALAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R++ G VG IMT
Sbjct: 57 VRRLHSGGADILDGPVGRIMT 77
>gi|398351304|ref|YP_006396768.1| inosine-5'-monophosphate dehydrogenase-like protein [Sinorhizobium
fredii USDA 257]
gi|390126630|gb|AFL50011.1| inosine-5'-monophosphate dehydrogenase-like protein [Sinorhizobium
fredii USDA 257]
Length = 160
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
DT + M + VGAL V PG ++ GI+T+RD L ++ QGRS+ ST V + MT
Sbjct: 26 DTAQSVARLMKETGVGALPVEVPG-VGTILGIVTDRDILTSVVSQGRST-STAVFEFMT 82
>gi|239825593|ref|YP_002948217.1| inosine 5'-monophosphate dehydrogenase [Geobacillus sp. WCH70]
gi|239805886|gb|ACS22951.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. WCH70]
Length = 488
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T + VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S K+ D+MT+E
Sbjct: 145 FI-----QDYSIKIADVMTKE 160
>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
[Metallosphaera sedula DSM 5348]
Length = 164
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
D + A M HN+G+++VV E+ V GIITERD +R + KV D MTE
Sbjct: 20 DNITAAAMEMKNHNMGSMMVVN--EKNQVVGIITERDMVRAL---ADKRLDAKVKDYMTE 74
Query: 138 EV 139
V
Sbjct: 75 SV 76
>gi|325182347|emb|CCA16800.1| myosinlike protein putative [Albugo laibachii Nc14]
Length = 2641
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 59 ILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRK 118
+L+A + + CT +V A K M +H A++V + + G++T +D LRK
Sbjct: 2299 VLEALENESKPPIIPCTM--SVLKASKLMVEHKKAAIIV---DSEDRIVGMLTPKDILRK 2353
Query: 119 IIVQGRSSKSTKVGDIMTEE 138
++ +G +KST V +MT++
Sbjct: 2354 LVAKGLKAKSTSVHMVMTKD 2373
>gi|311070656|ref|YP_003975579.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
gi|310871173|gb|ADP34648.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
Length = 488
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNNEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT E
Sbjct: 145 FI-----SDYSMKISDVMTRE 160
>gi|418324058|ref|ZP_12935310.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus pettenkoferi
VCU012]
gi|365227716|gb|EHM68905.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus pettenkoferi
VCU012]
Length = 488
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T D+ V++A M+++ + + +V+ E + AGIIT RD LR I S K+
Sbjct: 100 FFLTPDEKVFEAEALMSKYRISGVPIVEDAETRKFAGIITNRD-LRFI-----EDFSIKI 153
Query: 132 GDIMTEE 138
D+MT+E
Sbjct: 154 SDVMTKE 160
>gi|218901915|ref|YP_002449749.1| hypothetical protein BCAH820_0797 [Bacillus cereus AH820]
gi|229120369|ref|ZP_04249616.1| CBS domain protein [Bacillus cereus 95/8201]
gi|218538112|gb|ACK90510.1| CBS domain protein [Bacillus cereus AH820]
gi|228662954|gb|EEL18547.1| CBS domain protein [Bacillus cereus 95/8201]
Length = 139
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 10/68 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CTT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VQCTTLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMT 136
K+ ++MT
Sbjct: 66 NKITNVMT 73
>gi|145591209|ref|YP_001153211.1| signal transduction protein [Pyrobaculum arsenaticum DSM 13514]
gi|145282977|gb|ABP50559.1| putative signal transduction protein with CBS domains [Pyrobaculum
arsenaticum DSM 13514]
Length = 139
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
G+ A + T D T+ +A M QH VG LV+V K G+I+ERD +R I
Sbjct: 4 GEIAKKPAVAITPDKTIEEAAALMAQHRVGLLVIVDKENPKKPIGVISERDIIRGI 59
>gi|57640971|ref|YP_183449.1| hypothetical protein TK1036 [Thermococcus kodakarensis KOD1]
gi|57159295|dbj|BAD85225.1| hypothetical protein, conserved, containing CBS domains
[Thermococcus kodakarensis KOD1]
Length = 136
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
+ DDTV A + M + ++G+LVVV E V G +T+ D +R++++ G + +T
Sbjct: 15 LIGVKPDDTVKRAGEVMVEFDIGSLVVVD--ENGDVVGFLTKGDIIRRMVIPGLPN-TTP 71
Query: 131 VGDIMTEEV 139
V +IMT+++
Sbjct: 72 VKEIMTKDL 80
>gi|386841418|ref|YP_006246476.1| signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374101719|gb|AEY90603.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451794713|gb|AGF64762.1| putative signal-transduction protein with CBS domain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 139
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
+TT D++ KGA+ ++TV DA + MT+ VGAL + G + G++T+
Sbjct: 2 TTTARDLMT---KGAE----CVAAEETVLDAARKMTELGVGALPIC--GADDRLKGVLTD 52
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEE 138
RD + ++ G+ + K GD+ E
Sbjct: 53 RDIVVGVLGAGKDPAAVKAGDLAQGE 78
>gi|15679235|ref|NP_276352.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622335|gb|AAB85713.1| inosine-5'-monophosphate dehydrogenase related protein III
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 313
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYL 116
+ TT D++ DAV M +++VGAL VV E+ +AGI++ERD++
Sbjct: 120 ISITTRDSIADAVSMMLENSVGALPVVDDDEK--IAGIVSERDFV 162
>gi|421746793|ref|ZP_16184560.1| hypothetical protein B551_08816 [Cupriavidus necator HPC(L)]
gi|409774630|gb|EKN56226.1| hypothetical protein B551_08816 [Cupriavidus necator HPC(L)]
Length = 157
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
+ T DDT+ A + M Q +VGAL V + + + G++T+RD + G +TKV
Sbjct: 27 FLTQDDTIKRAAELMAQLDVGALPVC---DGRRLTGMVTDRDITVRCTAAGADPANTKVT 83
Query: 133 DIMTEEV 139
M+E+V
Sbjct: 84 QAMSEDV 90
>gi|56418544|ref|YP_145862.1| inosine 5'-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|261417509|ref|YP_003251191.1| inosine 5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297528385|ref|YP_003669660.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
gi|319765167|ref|YP_004130668.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
gi|375006813|ref|YP_004980441.1| inosine-5'-monophosphate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448236319|ref|YP_007400377.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. GHH01]
gi|56378386|dbj|BAD74294.1| inositol-monophosphate dehydrogenase [Geobacillus kaustophilus
HTA426]
gi|261373966|gb|ACX76709.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
gi|297251637|gb|ADI25083.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
gi|317110033|gb|ADU92525.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
gi|359285657|gb|AEV17341.1| Inosine-5'-monophosphate dehydrogenase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445205161|gb|AGE20626.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. GHH01]
Length = 488
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T D VYDA M+++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPDHQVYDAEHLMSKYRISGVPIVNNPEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S K+ ++MT+E
Sbjct: 145 FI-----QDYSIKISEVMTKE 160
>gi|39959|emb|CAA39204.1| IMP dehydrogenase [Bacillus subtilis]
Length = 513
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|333902035|ref|YP_004475908.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
[Pseudomonas fulva 12-X]
gi|333117300|gb|AEF23814.1| putative CBS domain and cyclic nucleotide-regulated
nucleotidyltransferase [Pseudomonas fulva 12-X]
Length = 643
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D + DAV+ M + VG++V+V PG + GI T RD LR+ + G SS +
Sbjct: 190 CSPDLPLRDAVRQMHEQQVGSIVIVDPGLRPQ--GIFTLRD-LRRAVADG-SSLDQPISG 245
Query: 134 IMTE 137
+MT+
Sbjct: 246 LMTQ 249
>gi|91773709|ref|YP_566401.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712724|gb|ABE52651.1| Cystathionine beta-synthase domain-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 315
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
+W T+D + +A M +H VG+L ++ G+ + GIITERD LR I
Sbjct: 269 VWTTSDTDLGEASSLMLKHGVGSLPIIDNGK---LCGIITERDVLRAI 313
>gi|170751024|ref|YP_001757284.1| signal-transduction protein [Methylobacterium radiotolerans JCM
2831]
gi|170657546|gb|ACB26601.1| putative signal-transduction protein with CBS domains
[Methylobacterium radiotolerans JCM 2831]
Length = 143
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
T++ IL KG S + D T+ + ++ + +GALVV + +VAGII+ERD
Sbjct: 2 TVARILAEKGS----SVVTVGPDKTLDEVIQILADKRIGALVVAQA--DGTVAGIISERD 55
Query: 115 YLRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G S+ V MT EV
Sbjct: 56 IMRALARHGGSAFDAPVSAHMTAEV 80
>gi|28210105|ref|NP_781049.1| inosine-5'-monophosphate dehydrogenase [Clostridium tetani E88]
gi|28202541|gb|AAO34986.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
tetani E88]
Length = 143
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+DTV A + M +H VG+L + G+ + GIIT+RD + + G S ++ V +IMT
Sbjct: 17 EDTVEHAAQLMKEHGVGSLPICNEGK---IVGIITDRDIALRSVAMGESIQNQTVRNIMT 73
>gi|428277422|ref|YP_005559157.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
natto BEST195]
gi|291482379|dbj|BAI83454.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
natto BEST195]
Length = 488
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|289192335|ref|YP_003458276.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288938785|gb|ADC69540.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 298
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTK 130
L D+ +YDA+K M ++NVG LV+V + + GIIT D L+ I+ G+ ++ K
Sbjct: 241 LTIHKDEKIYDALKIMNKNNVGRLVIVD--DNNKIVGIITRTDILK--IISGKFPENFK 295
>gi|383781302|ref|YP_005465869.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
gi|381374535|dbj|BAL91353.1| hypothetical protein AMIS_61330 [Actinoplanes missouriensis 431]
Length = 137
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+T+ DA + M++ NVG+L + GE + G++T+RD + K + QGR++ + ++
Sbjct: 19 ETLADAARKMSELNVGSLPIC--GEDNRLHGMLTDRDIVIKALAQGRNAADVRASEL 73
>gi|302039066|ref|YP_003799388.1| hypothetical protein NIDE3787 [Candidatus Nitrospira defluvii]
gi|300607130|emb|CBK43463.1| conserved protein of unknown function, contains CBS domain pairs
[Candidatus Nitrospira defluvii]
Length = 284
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 76 TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
+D+T DA + M ++GAL V++ E + GIITE D +RK++ ++ +VG +M
Sbjct: 164 SDETALDAAQRMADKHIGALFVMEADE---LVGIITEGDLVRKLLAYQLDPQTLRVGALM 220
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVV---KPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
D +V M H++G++++ +P +AGI+TE D + K++ GR T + D
Sbjct: 23 DTSVVTVATRMRTHSIGSVLIECFDRPHNDCRIAGIVTETDLVAKVLAPGRVPSRTSMAD 82
Query: 134 IMT 136
IM+
Sbjct: 83 IMS 85
>gi|16077077|ref|NP_387890.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307818|ref|ZP_03589665.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312140|ref|ZP_03593945.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317073|ref|ZP_03598367.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321336|ref|ZP_03602630.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313676|ref|YP_004205963.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
gi|384173670|ref|YP_005555055.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|386756589|ref|YP_006229805.1| inosine 5'-monophosphate dehydrogenase [Bacillus sp. JS]
gi|402774252|ref|YP_006628196.1| inosine-monophosphate dehydrogenase [Bacillus subtilis QB928]
gi|418030641|ref|ZP_12669126.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|430756716|ref|YP_007211248.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|449092724|ref|YP_007425215.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis XF-1]
gi|452916663|ref|ZP_21965283.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis MB73/2]
gi|34395945|sp|P21879.2|IMDH_BACSU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH; AltName:
Full=Superoxide-inducible protein 12; Short=SOI12
gi|467399|dbj|BAA05245.1| IMP dehydrogenase [Bacillus subtilis]
gi|2632276|emb|CAB11785.1| inosine-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. 168]
gi|320019950|gb|ADV94936.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
gi|349592894|gb|AEP89081.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|351471700|gb|EHA31813.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|384929871|gb|AFI26549.1| inosine 5'-monophosphate dehydrogenase [Bacillus sp. JS]
gi|402479438|gb|AFQ55947.1| Inosine-monophosphate dehydrogenase [Bacillus subtilis QB928]
gi|407955700|dbj|BAM48940.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BEST7613]
gi|407962971|dbj|BAM56210.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BEST7003]
gi|430021236|gb|AGA21842.1| Inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|449026639|gb|AGE61878.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis XF-1]
gi|452114442|gb|EME04844.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis MB73/2]
Length = 488
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|379004303|ref|YP_005259975.1| hypothetical protein Pogu_1341 [Pyrobaculum oguniense TE7]
gi|375159756|gb|AFA39368.1| CBS domain protein [Pyrobaculum oguniense TE7]
Length = 139
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
G+ A + T D T+ +A M QH VG LV+V K G+++ERD +R I
Sbjct: 4 GEIAKKPAVAITPDKTIEEAAALMAQHRVGLLVIVDRENPKKPIGVVSERDIIRSI 59
>gi|433444401|ref|ZP_20409315.1| inosine-5'-monophosphate dehydrogenase [Anoxybacillus flavithermus
TNO-09.006]
gi|432001598|gb|ELK22472.1| inosine-5'-monophosphate dehydrogenase [Anoxybacillus flavithermus
TNO-09.006]
Length = 488
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ T + VYDA M+++ + + +V E++ + GIIT RD LR I S K+
Sbjct: 100 FFLTPEHQVYDAEHLMSKYRISGVPIVNNAEEQKLVGIITNRD-LRFI-----QDYSIKI 153
Query: 132 GDIMTEE 138
D+MT+E
Sbjct: 154 SDVMTKE 160
>gi|399523073|ref|ZP_10763733.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109101|emb|CCH40294.1| Signal transduction protein [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 639
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Query: 41 VSSARMEEHGFESTTISDILKAK-GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVK 99
+ SA + HG S+++K K K S + D + + MT+H+V +++VV
Sbjct: 134 LKSALEDSHG----KASELMKVKVRKLISRSAISVPLDTPIQQVAQVMTEHSVSSVIVVD 189
Query: 100 PG------------EQKS--VAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
PG EQ+S +AGI+T+RD +++ G S T V IMT
Sbjct: 190 PGTRWPDPNQVDVAEQQSQVMAGILTDRDLRTRVVAAGLPS-DTPVSQIMT 239
>gi|336121852|ref|YP_004576627.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856373|gb|AEH06849.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 278
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
L D ++YDAV +MT +++GAL VV+ G+ V GIITE+D
Sbjct: 232 LTVNKDASLYDAVDTMTTNDIGALPVVEDGK---VIGIITEKD 271
>gi|388456446|ref|ZP_10138741.1| CBS domain protein [Fluoribacter dumoffii Tex-KL]
Length = 149
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQ 122
G+ + + ++++V A + M ++VG LV+V+ + K V GI+T+RD + +++
Sbjct: 4 GEYCNRDVVVINSNESVKKAAELMRSYHVGDLVLVEETDNKKVPIGIVTDRDLVVEVMAA 63
Query: 123 GRSSKSTKVGDIMTE 137
G + +S V DI+TE
Sbjct: 64 GVTPESLLVRDILTE 78
>gi|90416488|ref|ZP_01224419.1| CBS domain protein [gamma proteobacterium HTCC2207]
gi|90331687|gb|EAS46915.1| CBS domain protein [gamma proteobacterium HTCC2207]
Length = 136
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKST--KVGDIM 135
D V+DA++ + +H V + VV +Q ++ G+++E D LR I+ ++ S V D M
Sbjct: 22 DNVFDAIELIVEHKVSGVCVVD--DQSTLLGVLSELDCLRAILNASYNNTSDIGAVRDYM 79
Query: 136 TEEV 139
TEEV
Sbjct: 80 TEEV 83
>gi|126459949|ref|YP_001056227.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249670|gb|ABO08761.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 160
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
CT + + + V+ M + VG++VVV P + GI+ ERD LR + + ST V
Sbjct: 30 CTPNTPLREVVELMVERGVGSVVVVDPANPRRPVGIVGERDVLRALALG--VDLSTPVSQ 87
Query: 134 IMTE 137
+M++
Sbjct: 88 VMSK 91
>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
Length = 143
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C V +AV + +GAL V++ G+ +AGII+ERD + ++ G + V
Sbjct: 16 ISCEVTTPVAEAVSLLAGKRIGALPVMRDGK---IAGIISERDVVYRLAESGHDALDMTV 72
Query: 132 GDIMT 136
GDIMT
Sbjct: 73 GDIMT 77
>gi|392553318|ref|ZP_10300455.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas spongiae
UST010723-006]
Length = 612
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
++R SV+ + + + S IS+I+K +GA + + + DA K+M+Q V +
Sbjct: 131 ANRLLSVNYKKRSDD-WSSKRISEIMK---QGA----VTAGPETKISDAAKTMSQFGVSS 182
Query: 95 LVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
L++ E + G+IT+RD +++ +GRS V IMT
Sbjct: 183 LMIT---ENNKLVGVITDRDLRNRVLAEGRSPNDV-VATIMT 220
>gi|386826993|ref|ZP_10114100.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
gi|386427877|gb|EIJ41705.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Beggiatoa alba B18LD]
Length = 609
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
++ D ++Y+AV+ M H V A++V + E GI T+ D +RK +V GR S T++
Sbjct: 160 VFVNADASIYEAVQQMQTHKVSAVLVQRGDE----VGIFTDTD-IRKHVVLGRVSVDTEL 214
Query: 132 GDIMT 136
G T
Sbjct: 215 GQFAT 219
>gi|126460002|ref|YP_001056280.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249723|gb|ABO08814.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 135
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
T+ +A +++T H VGA+VVV P GI++ERD ++ I + ST V M+ +
Sbjct: 26 TLLEAAEALTSHGVGAVVVVDPSSPDKPIGILSERDIVKAI--SAKMPLSTPVEAFMSTD 83
Query: 139 V 139
+
Sbjct: 84 L 84
>gi|74317862|ref|YP_315602.1| hypothetical protein Tbd_1844 [Thiobacillus denitrificans ATCC
25259]
gi|74057357|gb|AAZ97797.1| conserved hypothetical protein containing CBS domain [Thiobacillus
denitrificans ATCC 25259]
Length = 144
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
D V AV M + VG+LVV+K GE + G++TERD + ++ G K T+V IM
Sbjct: 21 DRVESAVARMVELGVGSLVVLKAGE---MVGLLTERDVVHGMVEHGCDLKDTEVSAIM 75
>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
Length = 173
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 52 ESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIIT 111
E+ + ++ KG G+ T+ DT+ AV + +GAL+V GE ++ GI++
Sbjct: 30 ETAIVGQLISKKG----GTTYTITSSDTLSTAVTVLRDRRIGALLVT--GEGGALEGILS 83
Query: 112 ERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
ERD +RK+ + VG+ MT +V
Sbjct: 84 ERDIVRKLAETPGQTLPQTVGENMTSKV 111
>gi|218248399|ref|YP_002373770.1| hypothetical protein PCC8801_3652 [Cyanothece sp. PCC 8801]
gi|257061465|ref|YP_003139353.1| hypothetical protein Cyan8802_3706 [Cyanothece sp. PCC 8802]
gi|218168877|gb|ACK67614.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591631|gb|ACV02518.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 208
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
TV AVK M + V +L+V + Q + GIITE D + K++ G+ K+ +V +IMT+
Sbjct: 20 TVAQAVKLMEEQGVLSLIVNRRHPQDAY-GIITETDIINKVVAYGKDPKTIRVYEIMTK 77
>gi|398303965|ref|ZP_10507551.1| CBS domain pair sporulation protein YhcV [Bacillus vallismortis
DV1-F-3]
Length = 140
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+ T+ +A M Q+NVGA+ VV EQ ++ G++T+RD + +GR + T V ++M+
Sbjct: 18 NQTIQEAASLMNQYNVGAIPVV---EQGALKGMLTDRDIALRTTAEGRDGQ-TPVSEVMS 73
Query: 137 EEV 139
++
Sbjct: 74 TDL 76
>gi|325182681|emb|CCA17136.1| myosin 29 putative [Albugo laibachii Nc14]
Length = 3123
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S TI+ ILK +G + V +A MT+H A+V+ KSV G++T
Sbjct: 2735 SPTIAMILKEEGDPP-----VVSPHAKVTEAAVLMTKHRKAAIVL---DHSKSVIGMVTP 2786
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMT 136
+D LRK++ +G + T V IMT
Sbjct: 2787 KDLLRKVVAKGLCADDTLVETIMT 2810
>gi|343507855|ref|ZP_08745233.1| hypothetical protein VII00023_07804 [Vibrio ichthyoenteri ATCC
700023]
gi|342796250|gb|EGU31943.1| hypothetical protein VII00023_07804 [Vibrio ichthyoenteri ATCC
700023]
Length = 627
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
S+R + S E + F + IL + + S T+ A M + NV A
Sbjct: 131 SARLRTAVSNHSEGNDFTTAKARKILNREPITLEAS-------ATIQQAANVMAEENVTA 183
Query: 95 LVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L++VKP ++ + GI+T+RD ++I QG + T V ++MT +V
Sbjct: 184 LLIVKPAEECSEDEDEDQLMGILTDRDLCIRVISQGIDTNLT-VSEVMTTDV 234
>gi|293375290|ref|ZP_06621572.1| CBS domain protein [Turicibacter sanguinis PC909]
gi|325842557|ref|ZP_08167728.1| CBS domain protein [Turicibacter sp. HGF1]
gi|292646046|gb|EFF64074.1| CBS domain protein [Turicibacter sanguinis PC909]
gi|325489601|gb|EGC91965.1| CBS domain protein [Turicibacter sp. HGF1]
Length = 153
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
T +TV +A + M +HNVG++ V+ E V G++T+RD + ++ STK+ D
Sbjct: 14 LTPTETVLNASRLMKKHNVGSIPVI--DENSKVIGLVTDRDIVIRVFADIL-PMSTKIED 70
Query: 134 IMTEEV 139
IMT V
Sbjct: 71 IMTHPV 76
>gi|258651285|ref|YP_003200441.1| signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
gi|258554510|gb|ACV77452.1| putative signal transduction protein with CBS domains [Nakamurella
multipartita DSM 44233]
Length = 143
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ DIL KG + D +V DAV ++ + +GA+VV + S++GI++ERD
Sbjct: 3 VKDILNRKGS----AVATIDPDASVADAVATLHERRIGAVVV--SADDASISGILSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+ + G + + V IMT EV
Sbjct: 57 VGALATMGPAVLTATVRQIMTAEV 80
>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
Length = 143
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+ IL+AKG+ + + T+ + ++ + +GA+V+ E VAGI++ERD
Sbjct: 3 VRHILEAKGR----DVVTLKPEATLEETMQVLANRRIGAIVLTN--ENGGVAGIVSERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEEV 139
+R + G + S VG++MT +V
Sbjct: 57 VRVLGTAGVGAISQSVGEVMTSQV 80
>gi|423398404|ref|ZP_17375605.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|423409267|ref|ZP_17386416.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
gi|401647620|gb|EJS65226.1| hypothetical protein ICU_04098 [Bacillus cereus BAG2X1-1]
gi|401656264|gb|EJS73787.1| hypothetical protein ICY_03952 [Bacillus cereus BAG2X1-3]
Length = 139
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 71 WLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK--- 127
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K
Sbjct: 12 LIHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPG 64
Query: 128 STKVGDIMTEEV 139
S K+ ++MT ++
Sbjct: 65 SNKITNVMTTKI 76
>gi|407795838|ref|ZP_11142795.1| hypothetical protein MJ3_03012 [Salimicrobium sp. MJ3]
gi|407019658|gb|EKE32373.1| hypothetical protein MJ3_03012 [Salimicrobium sp. MJ3]
Length = 140
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
+ C DT+ K M + VG +V+ EQ AG+IT+RD + + +G S+++ K
Sbjct: 13 VACEASDTLTTIAKRMKEEEVGFVVIT---EQDKYAGVITDRDIVVNGLAKG-SAENVKA 68
Query: 132 GDIMTEEV 139
DIMT++V
Sbjct: 69 SDIMTDKV 76
>gi|161528181|ref|YP_001582007.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
gi|160339482|gb|ABX12569.1| putative signal-transduction protein with CBS domains
[Nitrosopumilus maritimus SCM1]
Length = 165
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+T+ + K M + NVG ++VV ++ + GI+TERD++ KI+ + R + TK+ ++M+
Sbjct: 41 ETLEEVAKKMKEENVGCVIVV---DKIATLGIVTERDFVTKIVAE-RKTPHTKIFEVMS 95
>gi|159041203|ref|YP_001540455.1| signal-transduction protein [Caldivirga maquilingensis IC-167]
gi|157920038|gb|ABW01465.1| putative signal-transduction protein with CBS domains [Caldivirga
maquilingensis IC-167]
Length = 143
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 80 VYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
V +A+K M +NVG +V+V E K V G+I+ERD +R +
Sbjct: 21 VMEAIKLMADNNVGLVVIVDSPENKKVLGVISERDVIRAL 60
>gi|83311131|ref|YP_421395.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
gi|82945972|dbj|BAE50836.1| CBS domain [Magnetospirillum magneticum AMB-1]
Length = 143
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
+SDIL KG + +AV+ M VGA++VV ++ + GI TERD
Sbjct: 3 VSDILAKKGS----KIFKILPSKAMIEAVQGMAAFKVGAVLVVD--DKDNTLGIFTERDV 56
Query: 116 LRKIIVQGRSSKSTKVGDIMTEE 138
R + G T VGD MT +
Sbjct: 57 TRCLAAHGARILETPVGDHMTPD 79
>gi|350265192|ref|YP_004876499.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598079|gb|AEP85867.1| CBS domain pair sporulation protein YhcV [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 140
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
+ + T+ +A M QHNVG + VV EQ + G++T+RD + QGR + T V +
Sbjct: 15 VSPNQTIQEAASLMKQHNVGVIPVV---EQGVLKGMLTDRDIALRTTAQGRDGQ-TPVSE 70
Query: 134 IMTEEV 139
+M+ ++
Sbjct: 71 VMSTDL 76
>gi|415886441|ref|ZP_11548221.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
gi|387587128|gb|EIJ79451.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
methanolicus MGA3]
Length = 143
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ D VY+ M + NVGA+ VV G+ + G++T+RD + + I + + S+KV D
Sbjct: 15 CSLLDNVYEVAVKMKELNVGAIPVVDNGK---LVGMVTDRDIVIRCIAE-KYPPSSKVED 70
Query: 134 IMTEEV 139
IM+ ++
Sbjct: 71 IMSHQL 76
>gi|118443477|ref|YP_877467.1| hypothetical protein NT01CX_1385 [Clostridium novyi NT]
gi|118133933|gb|ABK60977.1| CBS domain protein, putative [Clostridium novyi NT]
Length = 142
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
+D+V A + M+++NVG++ V + GE+ V GI+T+RD + +G++ KV DIMT
Sbjct: 17 EDSVERAAQMMSEYNVGSIPVCR-GEK--VVGIVTDRDITLRSSAEGKNVHQQKVKDIMT 73
>gi|430005121|emb|CCF20922.1| Cyclic nucleotide-binding protein [Rhizobium sp.]
Length = 608
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKV 131
L C+ +D+V A + M V +L VV + + G++T RD +++ QG T+V
Sbjct: 153 LTCSPEDSVRHAAEIMRDGRVSSLGVV---DGDRLVGLVTTRDLTSRVLAQGLDPIHTRV 209
Query: 132 GDIMTEE 138
G IMT E
Sbjct: 210 GAIMTAE 216
>gi|410455393|ref|ZP_11309273.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
gi|409929220|gb|EKN66305.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
bataviensis LMG 21833]
Length = 144
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 10/67 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
CT D +++ M + NVGA+ +V +++ + G+IT+RD I+++G + K ST
Sbjct: 14 CCTLLDNLFEVAVKMKELNVGAIPIV---DEEKLVGMITDRD----IVIRGVAEKHPGST 66
Query: 130 KVGDIMT 136
KV DIM+
Sbjct: 67 KVEDIMS 73
>gi|402815940|ref|ZP_10865532.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
gi|402506980|gb|EJW17503.1| hypothetical protein PAV_4c06160 [Paenibacillus alvei DSM 29]
Length = 141
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 10/69 (14%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---STK 130
CT D +Y+A M Q++ G + +V GE+ + G +T+RD ++++G +SK ST+
Sbjct: 15 CTVLDNIYEAAVKMKQYDTGFIPIVD-GER--LVGAVTDRD----LVLRGIASKHPGSTR 67
Query: 131 VGDIMTEEV 139
+ IMTEE+
Sbjct: 68 ISHIMTEEL 76
>gi|229016050|ref|ZP_04173004.1| CBS domain protein [Bacillus cereus AH1273]
gi|229022272|ref|ZP_04178813.1| CBS domain protein [Bacillus cereus AH1272]
gi|228739011|gb|EEL89466.1| CBS domain protein [Bacillus cereus AH1272]
gi|228745199|gb|EEL95247.1| CBS domain protein [Bacillus cereus AH1273]
Length = 147
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMT 136
K+ +IMT
Sbjct: 74 NKITNIMT 81
>gi|343501210|ref|ZP_08739090.1| cyclic nucleotide-binding protein [Vibrio tubiashii ATCC 19109]
gi|418480414|ref|ZP_13049473.1| cyclic nucleotide-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342818722|gb|EGU53577.1| cyclic nucleotide-binding protein [Vibrio tubiashii ATCC 19109]
gi|384571956|gb|EIF02483.1| cyclic nucleotide-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 629
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 35 SSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGA 94
++R S E++ ++ + +L ++ S +T+ +A M + NV +
Sbjct: 131 TARLRQTVSNSSEQNDLTTSKVRTLLTSEAPTIPMS-------ETIQNAAIKMAEENVSS 183
Query: 95 LVVVKPG-------EQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
L++V P + + GIIT+RD +++ QG S +V +MT EV
Sbjct: 184 LLIVDPDIAQDDEDDNNPLVGIITDRDLCTRVLAQGLDP-SDEVSTVMTTEV 234
>gi|423392894|ref|ZP_17370120.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
gi|401632873|gb|EJS50656.1| hypothetical protein ICG_04742 [Bacillus cereus BAG1X1-3]
Length = 139
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMTEEV 139
K+ +IMT +
Sbjct: 66 NKITNIMTTNI 76
>gi|423421180|ref|ZP_17398269.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
gi|401099731|gb|EJQ07733.1| hypothetical protein IE3_04652 [Bacillus cereus BAG3X2-1]
Length = 139
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + +VG + VV E + V G++T+RD ++V+G + K S
Sbjct: 13 VHCTPLDNVYEAAVKMKEESVGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 65
Query: 129 TKVGDIMT 136
K+ +IMT
Sbjct: 66 NKITNIMT 73
>gi|126726337|ref|ZP_01742178.1| Protein containing a CBS domain [Rhodobacterales bacterium
HTCC2150]
gi|126704200|gb|EBA03292.1| Protein containing a CBS domain [Rhodobacteraceae bacterium
HTCC2150]
Length = 144
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEEV 139
AV ++ VGAL+V G K++ GI++ERD +R++ +G + VGD+MT V
Sbjct: 27 AVSELSNRKVGALIVSDDG--KTLDGILSERDIIREMGKRGTACLGDNVGDLMTGTV 81
>gi|358446979|ref|ZP_09157516.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607076|emb|CCE55869.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 618
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 54 TTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITER 113
T I D+ AK + C D ++ +A + M +++V +L+V+ E + GIIT+R
Sbjct: 152 THIHDVKIAKPRS-------CPPDLSIREAAQRMEEYSVSSLLVI---EGDDLLGIITDR 201
Query: 114 DYLRKIIVQGRSSKSTKVGDIMTEEV 139
D +++ QG + + V D+MT+++
Sbjct: 202 DMRGRVVAQGVDT-ARPVADVMTKDL 226
>gi|350264110|ref|YP_004875417.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349596997|gb|AEP84785.1| inosine-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 488
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|37680284|ref|NP_934893.1| signal-transduction protein [Vibrio vulnificus YJ016]
gi|37199031|dbj|BAC94864.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
Length = 625
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKS---VAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T+ A + M V +L+V++ ++++ +AGI+T+RD +++ QG+S V +M
Sbjct: 168 TIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEA-VASVM 226
Query: 136 TEEV 139
T +V
Sbjct: 227 TPQV 230
>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
gi|20178342|sp|P50100.2|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
Length = 196
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 78 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
+T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++
Sbjct: 21 ETAVEIAYKMREHGIGSVVIV--NEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQ 78
Query: 138 EV 139
V
Sbjct: 79 PV 80
>gi|374850168|dbj|BAL53164.1| inosine monophosphate dehydrogenase [uncultured gamma
proteobacterium]
Length = 147
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVA-GIITERDYLRKIIVQGRSSKSTKVGDIM 135
D+ + A + M Q++VG +VVV+ + K + GI+T+RD + K++ QG + D+M
Sbjct: 16 DEPLIFAARLMRQYHVGDVVVVEERDGKCIPIGILTDRDMVVKVLAQGLDPHHLAIADVM 75
Query: 136 T 136
+
Sbjct: 76 S 76
>gi|441212766|ref|ZP_20975413.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
gi|440626069|gb|ELQ87911.1| inosine-5-monophosphate dehydrogenase [Mycobacterium smegmatis
MKD8]
Length = 143
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 56 ISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDY 115
I+D+L+ KG + + TV + + + + N+GA+VVV K + GI++ERD
Sbjct: 3 IADVLRNKGT----AVVTIRPQATVTELLAGLAEMNIGAMVVVG---DKGLEGIVSERDV 55
Query: 116 LRKIIVQGRSSKSTKVGDIMT 136
+R++ +G S + V IMT
Sbjct: 56 VRQLHKRGSSLLAQPVSSIMT 76
>gi|397780720|ref|YP_006545193.1| hypothetical protein BN140_1554 [Methanoculleus bourgensis MS2]
gi|396939222|emb|CCJ36477.1| putative protein MK0525 AltName: Full=OrfX [Methanoculleus
bourgensis MS2]
Length = 150
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
+ D + + M + NVG++V+V G+ + V G+IT+RD +++ Q R+ + GDI
Sbjct: 15 SPDTPAVEVARIMGEKNVGSVVIVT-GDNRPV-GVITDRDLAVRVMAQERNPGEVRAGDI 72
Query: 135 MTEEV 139
+T +V
Sbjct: 73 VTRDV 77
>gi|296332950|ref|ZP_06875408.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305672707|ref|YP_003864378.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149914|gb|EFG90805.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305410950|gb|ADM36068.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 488
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|443635168|ref|ZP_21119335.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443344980|gb|ELS59050.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 488
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + + T D V+DA M ++ + + +V E + + GIIT RD LR
Sbjct: 86 DKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S S K+ D+MT+E
Sbjct: 145 FI-----SDYSMKISDVMTKE 160
>gi|320155965|ref|YP_004188344.1| signal-transduction protein containing cAMP-binding and CBS domains
[Vibrio vulnificus MO6-24/O]
gi|319931277|gb|ADV86141.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Vibrio vulnificus MO6-24/O]
Length = 625
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKS---VAGIITERDYLRKIIVQGRSSKSTKVGDIM 135
T+ A + M V +L+V++ ++++ +AGI+T+RD +++ QG+S V +M
Sbjct: 168 TIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEA-VASVM 226
Query: 136 TEEV 139
T +V
Sbjct: 227 TPQV 230
>gi|408404647|ref|YP_006862630.1| CBS and zinc finger C2H2 domain-containing protein [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365243|gb|AFU58973.1| CBS and zinc finger C2H2 domain-containing protein [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 277
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 77 DDTVY--DAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
D++ Y DA ++M Q V +++V + + + GIITERD L +++ + RS T + D+
Sbjct: 114 DESAYVADAARAMRQKGVSSVLVSRKAAMEPI-GIITERDILYRLVAEHRSPFKTVLKDV 172
Query: 135 MTEEV 139
M+ +
Sbjct: 173 MSSPL 177
>gi|348169797|ref|ZP_08876691.1| CBS domain-containing protein [Saccharopolyspora spinosa NRRL
18395]
Length = 139
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 54 TTISDILKAKGKGADGSWLWCT-TDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
TT DI+ A K C DD++Y A + M VG+L + G + GIIT+
Sbjct: 2 TTARDIMHAGAK--------CIGEDDSLYTAAQMMRDLKVGSLPIC--GRDDRLHGIITD 51
Query: 113 RDYLRKIIVQGRSSKSTKVGDI 134
RD + + +GR+ + G++
Sbjct: 52 RDIVLRCCAEGRNPAEMRAGEL 73
>gi|144898525|emb|CAM75389.1| signal-transduction protein containing cAMP-binding and CBS domains
[Magnetospirillum gryphiswaldense MSR-1]
Length = 479
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 75 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDI 134
T D ++ DA+ M + ++V V G+ +++ GI+TERD LR + QG + T +G I
Sbjct: 31 TEDLSLTDAIHRMYEARASSIVGVD-GQGRAI-GILTERDLLRLLSTQGAAGLDTTLGQI 88
Query: 135 MTEEV 139
MT V
Sbjct: 89 MTRPV 93
>gi|154245193|ref|YP_001416151.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
gi|154159278|gb|ABS66494.1| putative signal-transduction protein with CBS domains [Xanthobacter
autotrophicus Py2]
Length = 155
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVV--VKPGEQKSVAGIITE 112
T+ D+L+AK D + +TV DAV M + N+ +++V V E +V G+ +E
Sbjct: 3 TVDDMLRAKR---DTRIITLRMHETVADAVLVMKRENISSVIVKDVCRTEGNTVVGVFSE 59
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD R ++ G ++ + ++ EV
Sbjct: 60 RDVTRAVLEHGANTPKMVLASLLKREV 86
>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
Length = 146
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 79 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTEE 138
+V A + MT +GAL+VV+ G +AGI TERD L KI+ +T + +M +
Sbjct: 23 SVRSACRLMTDKKIGALLVVENGR---IAGIFTERDALNKILSAALDPDATTLDQVMVRD 79
>gi|237653285|ref|YP_002889599.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624532|gb|ACR01222.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 480
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGD 133
C+ DD + D V M + ++ +VVV + I+T+RD K+I GR +V D
Sbjct: 22 CSADDALVDIVGRMREMSISCVVVVDGAHPTA---ILTDRDLRNKVIAAGRDPAGLRVRD 78
Query: 134 IMTEEV 139
+M+ V
Sbjct: 79 VMSAPV 84
>gi|138893688|ref|YP_001124141.1| inosine 5'-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|196251176|ref|ZP_03149852.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
gi|134265201|gb|ABO65396.1| Inosine-monophosphate dehydrogenase [Geobacillus
thermodenitrificans NG80-2]
gi|196209317|gb|EDY04100.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
Length = 488
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 58 DILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLR 117
D +K +G + T D VYDA M ++ + + +V E++ + GIIT RD LR
Sbjct: 86 DKVKRSERGVITDPFFLTPDHQVYDAEHLMGKYRISGVPIVNNAEEQKLVGIITNRD-LR 144
Query: 118 KIIVQGRSSKSTKVGDIMTEE 138
I S K+ ++MT+E
Sbjct: 145 FI-----QDYSIKISEVMTKE 160
>gi|375082622|ref|ZP_09729675.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
gi|374742700|gb|EHR79085.1| inosine-5'-monophosphate dehydrogenase [Thermococcus litoralis DSM
5473]
Length = 177
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 77 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
++TV K + ++ V + VV+ E + GI+T+RD L K++ +G+ K K+ +IMT
Sbjct: 21 NETVEKVAKILARNKVSSAVVMDKDE---IIGIVTDRDILNKVVAKGKDPKEVKISEIMT 77
Query: 137 EE 138
++
Sbjct: 78 KD 79
>gi|126459490|ref|YP_001055768.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
gi|126249211|gb|ABO08302.1| putative signal-transduction protein with CBS domains [Pyrobaculum
calidifontis JCM 11548]
Length = 141
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 64 GKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKI 119
G+ A + T ++ D K M ++NVG +V+V P + + V G+++ERD +R +
Sbjct: 3 GQFAKKEVVKATPSTSIRDVAKLMAENNVGLVVLVDPRDPQRVVGVVSERDVVRAV 58
>gi|399039437|ref|ZP_10735041.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
gi|398062725|gb|EJL54495.1| putative signal-transduction protein containing cAMP-binding and
CBS domain-containing protein [Rhizobium sp. CF122]
Length = 144
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 53 STTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITE 112
S T+ IL KG+ + + TV +A +++ +GA+V+V G + ++GI TE
Sbjct: 2 SNTVKAILDTKGR----DVVTAGPNTTVSEAAVILSKKKIGAIVIV--GMENKISGIFTE 55
Query: 113 RDYLRKIIVQGRSSKSTKVGDIMTEEV 139
RD + I G + VG +MT +V
Sbjct: 56 RDVVHAIAKGGAACLDQPVGSLMTAKV 82
>gi|297530743|ref|YP_003672018.1| signal transduction protein with CBS domains [Geobacillus sp.
C56-T3]
gi|297253995|gb|ADI27441.1| putative signal transduction protein with CBS domains [Geobacillus
sp. C56-T3]
Length = 141
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEEV 139
V ++M+ ++
Sbjct: 67 AVTEVMSRDL 76
>gi|167725388|ref|ZP_02408624.1| CBS domain protein [Burkholderia pseudomallei DM98]
Length = 149
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 74 CTTDDTVYDAVKSMTQHNVGALVVVK-PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVG 132
C DTV DA M +VG L+VV G + G++T+RD + +I + + VG
Sbjct: 14 CRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKDVDPAALFVG 73
Query: 133 DIMT 136
+IM+
Sbjct: 74 EIMS 77
>gi|126665476|ref|ZP_01736458.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
gi|126630104|gb|EBA00720.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
Length = 685
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 36 SRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGAL 95
SR S S R + + ++ +S ++ K A + + +A + MT+++V AL
Sbjct: 192 SRLRSAVSRREKSNQLMTSRVSRLISRKTVSAPYTV-------RLQEAARIMTENSVSAL 244
Query: 96 VVVK-PGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMTE 137
++++ G+Q + GIIT+RD + + + S+ T + DIMTE
Sbjct: 245 LLMEGEGDQARLKGIITDRDLRIRAVTEALPSE-TPISDIMTE 286
>gi|365845115|ref|ZP_09385911.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
gi|364561834|gb|EHM39711.1| CBS domain protein [Flavonifractor plautii ATCC 29863]
Length = 145
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 83 AVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSKSTKVGDIMT 136
A + +++HNVG+L V GE + GI+T+RD + + + T+V DIMT
Sbjct: 23 AARLLSRHNVGSLPVC--GEDGGLRGIVTDRDIILRCVAAEEDPLKTQVKDIMT 74
>gi|261419287|ref|YP_003252969.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC61]
gi|319766103|ref|YP_004131604.1| signal transduction protein with CBS domains [Geobacillus sp.
Y412MC52]
gi|261375744|gb|ACX78487.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC61]
gi|317110969|gb|ADU93461.1| putative signal transduction protein with CBS domains [Geobacillus
sp. Y412MC52]
Length = 141
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 73 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---ST 129
+CT D +Y+ M NVGA+ +V G + G+IT+RD I+V+G + K ST
Sbjct: 14 YCTPLDNLYEVAVKMRDFNVGAIPIVDDGR---LVGMITDRD----IVVRGMAEKRPGST 66
Query: 130 KVGDIMTEEV 139
V ++M+ ++
Sbjct: 67 AVTEVMSRDL 76
>gi|393720647|ref|ZP_10340574.1| signal-transduction protein [Sphingomonas echinoides ATCC 14820]
Length = 142
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 55 TISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERD 114
TI+ IL KG+ + T +V DAV + VGA+ V+ E V GI +ERD
Sbjct: 2 TIAAILGNKGR----EVISITAQHSVGDAVAVLATRRVGAVPVM---EGNRVVGIFSERD 54
Query: 115 YLRKIIVQGRSSKSTKVGDIMT 136
+ I G + + VGD MT
Sbjct: 55 VIHAIHAYGADAMARSVGDTMT 76
>gi|229137522|ref|ZP_04266129.1| CBS domain protein [Bacillus cereus BDRD-ST26]
gi|228645882|gb|EEL02109.1| CBS domain protein [Bacillus cereus BDRD-ST26]
Length = 147
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 72 LWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDYLRKIIVQGRSSK---S 128
+ CT D VY+A M + ++G + VV E + V G++T+RD ++V+G + K S
Sbjct: 21 VQCTPLDNVYEAAVKMKEESIGLIPVV---ENEQVVGLVTDRD----LVVRGIAEKHPGS 73
Query: 129 TKVGDIMTEEV 139
K+ ++MT+ +
Sbjct: 74 NKITNVMTKNI 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,903,477,325
Number of Sequences: 23463169
Number of extensions: 64629048
Number of successful extensions: 194729
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 1751
Number of HSP's that attempted gapping in prelim test: 192929
Number of HSP's gapped (non-prelim): 2727
length of query: 139
length of database: 8,064,228,071
effective HSP length: 104
effective length of query: 35
effective length of database: 9,919,025,791
effective search space: 347165902685
effective search space used: 347165902685
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)