Query 032533
Match_columns 139
No_of_seqs 152 out of 1324
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:37:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.9 3.7E-24 1.3E-28 139.3 7.6 74 22-95 3-76 (79)
2 2ej7_A HCG3 gene; HCG3 protein 99.9 1.1E-23 3.9E-28 137.8 8.1 75 22-96 5-80 (82)
3 2ctq_A DNAJ homolog subfamily 99.9 1.8E-23 6.3E-28 144.6 8.0 84 22-106 16-99 (112)
4 2yua_A Williams-beuren syndrom 99.9 2.6E-23 9E-28 140.9 8.0 75 18-92 9-83 (99)
5 1bq0_A DNAJ, HSP40; chaperone, 99.9 4.9E-24 1.7E-28 145.4 4.3 73 26-98 3-75 (103)
6 2ctp_A DNAJ homolog subfamily 99.9 3.5E-23 1.2E-27 134.4 7.4 73 22-95 3-75 (78)
7 1hdj_A Human HSP40, HDJ-1; mol 99.9 4.5E-23 1.5E-27 133.6 7.3 71 26-97 3-73 (77)
8 2och_A Hypothetical protein DN 99.9 5E-23 1.7E-27 132.2 7.4 69 22-93 4-72 (73)
9 1wjz_A 1700030A21RIK protein; 99.9 2.9E-23 9.8E-28 139.0 6.4 76 18-93 8-89 (94)
10 2ctr_A DNAJ homolog subfamily 99.9 4E-23 1.4E-27 137.2 6.8 73 22-95 3-75 (88)
11 2ctw_A DNAJ homolog subfamily 99.9 5.3E-23 1.8E-27 141.7 7.4 76 21-96 12-87 (109)
12 2dmx_A DNAJ homolog subfamily 99.9 6.6E-23 2.3E-27 137.0 6.6 75 22-96 5-80 (92)
13 2cug_A Mkiaa0962 protein; DNAJ 99.9 1.4E-22 4.8E-27 134.5 7.2 73 22-95 13-85 (88)
14 2o37_A Protein SIS1; HSP40, J- 99.9 1.5E-22 5.1E-27 135.5 6.3 71 22-95 4-74 (92)
15 2lgw_A DNAJ homolog subfamily 99.9 1.4E-22 4.7E-27 137.6 5.8 72 26-97 2-74 (99)
16 3apq_A DNAJ homolog subfamily 99.9 4.1E-22 1.4E-26 149.1 8.2 72 26-97 2-73 (210)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.9 3E-22 1E-26 137.7 5.7 88 22-111 11-102 (109)
18 2l6l_A DNAJ homolog subfamily 99.8 8.3E-21 2.8E-25 137.8 7.8 72 21-92 5-82 (155)
19 3lz8_A Putative chaperone DNAJ 99.8 1.2E-21 4.2E-26 157.7 0.0 76 17-93 19-94 (329)
20 2ys8_A RAB-related GTP-binding 99.8 2E-20 6.8E-25 124.8 5.1 63 24-87 25-87 (90)
21 1gh6_A Large T antigen; tumor 99.8 6.7E-21 2.3E-25 132.4 1.2 67 25-95 7-75 (114)
22 3hho_A CO-chaperone protein HS 99.8 1E-19 3.5E-24 134.7 5.9 67 25-91 3-76 (174)
23 1iur_A KIAA0730 protein; DNAJ 99.8 8.5E-20 2.9E-24 121.4 3.7 69 19-87 9-78 (88)
24 1faf_A Large T antigen; J doma 99.8 2.7E-19 9.4E-24 116.6 4.5 65 24-93 9-75 (79)
25 1fpo_A HSC20, chaperone protei 99.8 3.1E-19 1.1E-23 131.8 5.2 66 27-92 2-74 (171)
26 2pf4_E Small T antigen; PP2A, 99.8 6.7E-20 2.3E-24 135.6 0.9 66 25-94 10-77 (174)
27 3apo_A DNAJ homolog subfamily 99.7 1.1E-19 3.6E-24 158.3 0.8 78 21-98 16-93 (780)
28 3bvo_A CO-chaperone protein HS 99.7 1.3E-18 4.5E-23 131.9 6.7 67 24-90 41-114 (207)
29 1n4c_A Auxilin; four helix bun 99.7 2.9E-19 9.8E-24 133.0 2.4 67 22-88 113-182 (182)
30 2guz_A Mitochondrial import in 99.7 1.7E-18 5.7E-23 110.7 3.5 60 22-85 10-70 (71)
31 3uo3_A J-type CO-chaperone JAC 99.7 1.8E-18 6.2E-23 128.8 3.1 68 22-92 7-81 (181)
32 2qwo_B Putative tyrosine-prote 99.7 1.8E-18 6E-23 115.9 2.1 56 26-81 33-91 (92)
33 3ag7_A Putative uncharacterize 99.7 4E-18 1.4E-22 116.9 3.0 62 22-84 37-105 (106)
34 2y4t_A DNAJ homolog subfamily 99.2 7.8E-12 2.7E-16 99.1 4.7 66 25-90 381-449 (450)
35 2guz_B Mitochondrial import in 99.1 6.2E-11 2.1E-15 74.3 4.8 53 24-80 2-57 (65)
36 2pzi_A Probable serine/threoni 93.1 0.035 1.2E-06 47.4 1.9 49 22-78 625-675 (681)
37 1qqr_A Streptokinase domain B; 32.1 21 0.00072 24.7 1.7 31 28-58 34-64 (138)
38 4a3n_A Transcription factor SO 27.5 68 0.0023 18.4 3.4 41 44-89 14-54 (71)
39 3nm9_A HMG-D, high mobility gr 25.4 1.1E+02 0.0036 17.8 4.4 38 44-89 15-52 (73)
40 1ug2_A 2610100B20RIK gene prod 24.7 43 0.0015 21.7 2.1 22 37-58 67-88 (95)
41 1hry_A Human SRY; DNA, DNA-bin 24.0 1.1E+02 0.0038 17.8 3.9 39 44-87 16-54 (76)
42 2cqn_A Formin-binding protein 22.7 1.4E+02 0.0047 18.2 4.2 53 37-90 5-60 (77)
43 3f27_D Transcription factor SO 22.7 1.1E+02 0.0038 18.1 3.8 41 44-89 18-58 (83)
44 1cf7_A Protein (transcription 22.6 1.3E+02 0.0045 18.3 4.1 44 37-91 9-52 (76)
45 2crj_A SWI/SNF-related matrix- 22.3 1.4E+02 0.0048 18.2 4.4 41 44-89 19-59 (92)
46 2lxi_A RNA-binding protein 10; 21.7 71 0.0024 19.3 2.8 20 32-51 7-26 (91)
47 1wz6_A HMG-box transcription f 21.5 1.3E+02 0.0044 17.8 3.9 41 44-89 19-59 (82)
48 1i11_A Transcription factor SO 20.8 1.1E+02 0.0038 18.1 3.5 41 44-89 16-56 (81)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=3.7e-24 Score=139.26 Aligned_cols=74 Identities=41% Similarity=0.615 Sum_probs=68.6
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.+...|+|+||||+++++.++||+|||++++++|||+++..+.+.+.|+.|++||++|+||.+|..||.++..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 45567999999999999999999999999999999998877788999999999999999999999999988654
No 2
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=1.1e-23 Score=137.85 Aligned_cols=75 Identities=44% Similarity=0.714 Sum_probs=67.7
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS-AVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.....|+|+||||+++++.++||+|||++++++|||+++... .+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 445689999999999999999999999999999999987653 678899999999999999999999999887554
No 3
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=144.64 Aligned_cols=84 Identities=26% Similarity=0.476 Sum_probs=73.3
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccccccH
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDKYTL 101 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~~~~ 101 (139)
.+...|||+||||+++++.++||+|||++++++|||+++..+.+.++|++|++||+||+||.+|..||..+..++. ...
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~-~~~ 94 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS-MPF 94 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS-SCH
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC-CCH
Confidence 3456899999999999999999999999999999999887778999999999999999999999999998766554 344
Q ss_pred HHHHH
Q 032533 102 REYLA 106 (139)
Q Consensus 102 ~~~~~ 106 (139)
+.|..
T Consensus 95 ~~w~~ 99 (112)
T 2ctq_A 95 QQWEA 99 (112)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 4
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=2.6e-23 Score=140.91 Aligned_cols=75 Identities=27% Similarity=0.493 Sum_probs=69.2
Q ss_pred cccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccC
Q 032533 18 ESRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG 92 (139)
Q Consensus 18 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g 92 (139)
...+.+...|||+||||+++++.++||+|||+|++++|||+++..+.+.+.|+.|++||+||+||.+|..||...
T Consensus 9 ~~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 9 QGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CCCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 445577889999999999999999999999999999999998877888999999999999999999999999754
No 5
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.89 E-value=4.9e-24 Score=145.41 Aligned_cols=73 Identities=48% Similarity=0.836 Sum_probs=68.3
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032533 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
.|+|+||||+++++.++||+|||+|++++|||+++..+.+.++|+.|++||+||+||.+|..||..+...+..
T Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 6999999999999999999999999999999998876778899999999999999999999999999877653
No 6
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=3.5e-23 Score=134.41 Aligned_cols=73 Identities=47% Similarity=0.739 Sum_probs=66.7
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.+...|+|+||||+++++.++||+||+++++++|||+++ .+.+.+.|+.|++||+||+||.+|..||..+..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 455689999999999999999999999999999999975 4678899999999999999999999999988654
No 7
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.88 E-value=4.5e-23 Score=133.59 Aligned_cols=71 Identities=45% Similarity=0.739 Sum_probs=65.5
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032533 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.|+|+||||+++++.++||+||+++++++|||+++. +.+.+.|+.|++||++|+||.+|..||.+|..++.
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 699999999999999999999999999999999764 56789999999999999999999999998876654
No 8
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.88 E-value=5e-23 Score=132.19 Aligned_cols=69 Identities=43% Similarity=0.729 Sum_probs=61.7
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
.....|||+||||+++++.++||+||+++++++|||+++.. .+.|+.|++||++|+||.+|..||..|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 34557999999999999999999999999999999997643 5899999999999999999999998875
No 9
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.88 E-value=2.9e-23 Score=139.04 Aligned_cols=76 Identities=30% Similarity=0.547 Sum_probs=67.7
Q ss_pred cccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032533 18 ESRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD------SAVTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 18 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~------~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
+....+...|+|+||||+++++.++||+|||++++++|||+++.. +.+.+.|++|++||+||+||.+|..||..
T Consensus 8 ~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~ 87 (94)
T 1wjz_A 8 MALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ 87 (94)
T ss_dssp SCCSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHH
T ss_pred cccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 344567788999999999999999999999999999999998643 45788999999999999999999999986
Q ss_pred Cc
Q 032533 92 GI 93 (139)
Q Consensus 92 g~ 93 (139)
..
T Consensus 88 l~ 89 (94)
T 1wjz_A 88 RS 89 (94)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=4e-23 Score=137.17 Aligned_cols=73 Identities=41% Similarity=0.681 Sum_probs=66.4
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.....|||+||||++.++.++||+|||++++++|||+++ .+.+.+.|+.|++||++|+||.+|..||..+...
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 445679999999999999999999999999999999976 5678899999999999999999999999877533
No 11
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.88 E-value=5.3e-23 Score=141.75 Aligned_cols=76 Identities=41% Similarity=0.634 Sum_probs=69.7
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032533 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
......|+|+||||+++++.++||+|||+|++++|||+++..+.+.+.|+.|++||+||+||.+|..||..+..++
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 3556689999999999999999999999999999999988778889999999999999999999999999886543
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=6.6e-23 Score=137.01 Aligned_cols=75 Identities=43% Similarity=0.717 Sum_probs=67.4
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhccCcccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEI 96 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~ 96 (139)
.....|||+||||+++++.++||+|||++++++|||+++.. ..+.+.|+.|++||+||+||.+|..||..+....
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 44568999999999999999999999999999999998765 4678899999999999999999999998876543
No 13
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=1.4e-22 Score=134.52 Aligned_cols=73 Identities=36% Similarity=0.626 Sum_probs=66.0
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.....|+|+||||+++++.++||+|||++++++|||+++. +.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 3345799999999999999999999999999999999764 568899999999999999999999999987643
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.5e-22 Score=135.49 Aligned_cols=71 Identities=44% Similarity=0.735 Sum_probs=64.2
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
.+...|+|+||||+++++.++||+|||++++++|||+++.. .++|++|++||+||+||.+|..||.++..+
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 34668999999999999999999999999999999998654 469999999999999999999999887544
No 15
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=137.60 Aligned_cols=72 Identities=43% Similarity=0.719 Sum_probs=64.2
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032533 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.|||+||||+++++.++||+|||++++++|||+++.. ..+.+.|+.|++||++|+||.+|..||..+..++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 6999999999999999999999999999999998765 45788999999999999999999999998765554
No 16
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.86 E-value=4.1e-22 Score=149.12 Aligned_cols=72 Identities=40% Similarity=0.666 Sum_probs=67.7
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032533 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
+|||+||||+++++.++||+|||++++++|||+++..+.+.++|+.|++||++|+||.+|..||.+|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 699999999999999999999999999999999887788999999999999999999999999998876554
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.86 E-value=3e-22 Score=137.74 Aligned_cols=88 Identities=25% Similarity=0.432 Sum_probs=72.9
Q ss_pred CCCccchhhhccCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHHhCCchhhhhhhccCccccc
Q 032533 22 NMEFQDYYKILEVDYDA-TDEKIRLNYRKLALKWHPDKHNG---DSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEID 97 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~a-s~~eIk~ayr~la~~~HPDk~~~---~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~ 97 (139)
.....|+|+||||++++ +.++||+|||++++++|||++++ .+.+.+.|++|++||+||+||.+|..||..+....
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~- 89 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPD- 89 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTT-
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCch-
Confidence 45568999999999999 99999999999999999999865 35678999999999999999999999998775332
Q ss_pred cccHHHHHHHHhcc
Q 032533 98 KYTLREYLARFKGM 111 (139)
Q Consensus 98 ~~~~~~~~~~~~~~ 111 (139)
.....++..|...
T Consensus 90 -~~~~~~~~~~~~~ 102 (109)
T 2qsa_A 90 -QRFYNYYQYYRLR 102 (109)
T ss_dssp -CHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHH
Confidence 2345555555543
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.83 E-value=8.3e-21 Score=137.78 Aligned_cols=72 Identities=33% Similarity=0.632 Sum_probs=65.0
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHHhCCchhhhhhhccC
Q 032533 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS------AVTAKFQEINEAYAVLSDPDKRLDYDFTG 92 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~------~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g 92 (139)
..+..+|||+||||+++++.++||+|||++++++|||+++..+ .+.+.|+.|++||+||+||.+|..||..+
T Consensus 5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4566789999999999999999999999999999999987653 36789999999999999999999999754
No 19
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.81 E-value=1.2e-21 Score=157.67 Aligned_cols=76 Identities=37% Similarity=0.588 Sum_probs=0.0
Q ss_pred ccccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032533 17 RESRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 17 ~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
..+...|..+|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|..||.++.
T Consensus 19 ~~~~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 19 YFQSNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred ccccccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 444556778999999999999999999999999999999999764 4688999999999999999999999998743
No 20
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2e-20 Score=124.76 Aligned_cols=63 Identities=27% Similarity=0.361 Sum_probs=57.5
Q ss_pred CccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhh
Q 032533 24 EFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 87 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~ 87 (139)
...|+|+||||+++++.++||+|||+|++++|||+++. +.+.+.|+.|++||++|+||.+|..
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 34799999999999999999999999999999999764 5678899999999999999998864
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.80 E-value=6.7e-21 Score=132.37 Aligned_cols=67 Identities=22% Similarity=0.267 Sum_probs=60.9
Q ss_pred ccchhhhccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCccc
Q 032533 25 FQDYYKILEVDYDATD--EKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYE 95 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~--~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~ 95 (139)
..++|+||||++.++. ++||+|||+|++++|||+++. .++|++|++||+||+||.+|..||.++..+
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w 75 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccccc
Confidence 4699999999999998 999999999999999999764 479999999999999999999999876533
No 22
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.78 E-value=1e-19 Score=134.66 Aligned_cols=67 Identities=24% Similarity=0.508 Sum_probs=61.0
Q ss_pred ccchhhhccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032533 25 FQDYYKILEVDYDAT--DEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as--~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
..|||+||||+++++ ..+||++||++++++|||++++.+. +.+.|+.|++||+||+||.+|..||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 469999999999887 9999999999999999999876653 668999999999999999999999974
No 23
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.78 E-value=8.5e-20 Score=121.44 Aligned_cols=69 Identities=17% Similarity=0.315 Sum_probs=61.3
Q ss_pred ccCCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHHhCCchhhhh
Q 032533 19 SRSNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD-SAVTAKFQEINEAYAVLSDPDKRLD 87 (139)
Q Consensus 19 ~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~iL~dp~~R~~ 87 (139)
+...+...++|+||||+++++.++||+|||+|++++|||+++.. ..+.++|+.|++||++|++...|..
T Consensus 9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 44567778999999999999999999999999999999998766 3578999999999999999877733
No 24
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.76 E-value=2.7e-19 Score=116.63 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=57.8
Q ss_pred CccchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCc
Q 032533 24 EFQDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGI 93 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~ 93 (139)
+..++|+||||+++ ++.++||+|||++++++|||+++. .++|++|++||++|+|+.+|..++ +|.
T Consensus 9 ~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~-~g~ 75 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN-LGG 75 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC-CSS
T ss_pred hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh-cCC
Confidence 34689999999999 999999999999999999999642 479999999999999999999865 443
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.76 E-value=3.1e-19 Score=131.80 Aligned_cols=66 Identities=24% Similarity=0.475 Sum_probs=60.5
Q ss_pred chhhhccCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhccC
Q 032533 27 DYYKILEVDYDA--TDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDFTG 92 (139)
Q Consensus 27 d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~~g 92 (139)
|||+||||++++ +..+||++||++++++|||++++.+. +.+.|+.|++||+||+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999998 99999999999999999999876643 4579999999999999999999999753
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.76 E-value=6.7e-20 Score=135.64 Aligned_cols=66 Identities=23% Similarity=0.273 Sum_probs=58.3
Q ss_pred ccchhhhccCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcc
Q 032533 25 FQDYYKILEVDYDAT--DEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIY 94 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as--~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~ 94 (139)
..|+|+||||+++++ .++||+|||++++++|||++++ .++|++|++||+||+||.+|..||.+|..
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~~ 77 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 77 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGGC
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCCc
Confidence 479999999999998 6999999999999999999764 37999999999999999999999998863
No 27
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.75 E-value=1.1e-19 Score=158.33 Aligned_cols=78 Identities=37% Similarity=0.595 Sum_probs=40.8
Q ss_pred CCCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccCcccccc
Q 032533 21 SNMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTGIYEIDK 98 (139)
Q Consensus 21 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g~~~~~~ 98 (139)
......|||+||||+++++.++||+|||++++++|||+++..+.+.++|++|++||++|+||.+|..||.+|..+...
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 345568999999999999999999999999999999998777788899999999999999999999999998766653
No 28
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.75 E-value=1.3e-18 Score=131.94 Aligned_cols=67 Identities=24% Similarity=0.380 Sum_probs=60.1
Q ss_pred CccchhhhccCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHHhCCchhhhhhhc
Q 032533 24 EFQDYYKILEVDYD--ATDEKIRLNYRKLALKWHPDKHNGDSA-----VTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~--as~~eIk~ayr~la~~~HPDk~~~~~~-----a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
...|||+||||++. ++..+||++||+|++++|||+++..+. +.+.|+.|++||+||+||.+|..||.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 35799999999986 799999999999999999999876542 56789999999999999999999985
No 29
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.74 E-value=2.9e-19 Score=133.05 Aligned_cols=67 Identities=25% Similarity=0.361 Sum_probs=60.7
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHHhCCchhhhhh
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDSA---VTAKFQEINEAYAVLSDPDKRLDY 88 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~---a~~~f~~i~~Ay~iL~dp~~R~~Y 88 (139)
.+...|+|+||||++.++.++||+|||++++++|||++++.+. +.+.|+.|++||+||+||.+|..|
T Consensus 113 l~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 113 LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp SCTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred hcCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3444799999999999999999999999999999999876543 788999999999999999999887
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.7e-18 Score=110.69 Aligned_cols=60 Identities=28% Similarity=0.323 Sum_probs=53.5
Q ss_pred CCCccchhhhccCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhh
Q 032533 22 NMEFQDYYKILEVDY-DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKR 85 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~-~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R 85 (139)
.|...++|+||||++ +++.++||+|||+|++++|||+++ . .+.|++|++||++|+++..|
T Consensus 10 ~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence 566789999999998 799999999999999999999953 3 36999999999999988765
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.72 E-value=1.8e-18 Score=128.77 Aligned_cols=68 Identities=24% Similarity=0.449 Sum_probs=60.3
Q ss_pred CCCccchhhhc------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhccC
Q 032533 22 NMEFQDYYKIL------EVDY-DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFTG 92 (139)
Q Consensus 22 ~~~~~d~Y~iL------gv~~-~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~g 92 (139)
.....|||+|| |+++ +++..+||++||++++++|||++++ +.+.|+.|++||+||+||.+|..||...
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 34457999999 4665 8999999999999999999999875 5689999999999999999999999843
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.71 E-value=1.8e-18 Score=115.90 Aligned_cols=56 Identities=27% Similarity=0.406 Sum_probs=51.3
Q ss_pred cchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHHhCC
Q 032533 26 QDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGDS---AVTAKFQEINEAYAVLSD 81 (139)
Q Consensus 26 ~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~---~a~~~f~~i~~Ay~iL~d 81 (139)
.++|++|||++.++.++||+|||++++++|||++++.+ .+.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999987654 378899999999999964
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=4e-18 Score=116.90 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=53.5
Q ss_pred CCCccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---h----hHHHHHHHHHHHHHHhCCchh
Q 032533 22 NMEFQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---S----AVTAKFQEINEAYAVLSDPDK 84 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~---~----~a~~~f~~i~~Ay~iL~dp~~ 84 (139)
.+...|||+|||++. ++.++||+|||++++++|||+++.. + .+.++|+.|++||++|+|+..
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 344579999999996 9999999999999999999997632 1 467899999999999999863
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.21 E-value=7.8e-12 Score=99.09 Aligned_cols=66 Identities=45% Similarity=0.751 Sum_probs=55.7
Q ss_pred ccchhhhccCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHHhCCchhhhhhhc
Q 032533 25 FQDYYKILEVDYDATDEKIRLNYRKLALKWHPDKHNGD---SAVTAKFQEINEAYAVLSDPDKRLDYDF 90 (139)
Q Consensus 25 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~---~~a~~~f~~i~~Ay~iL~dp~~R~~YD~ 90 (139)
..++|.+||+.+.++.++|+++|+++++++|||+.+.. ..+.+.|+.|.+||++|+||++|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999997654 3478899999999999999999999995
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.12 E-value=6.2e-11 Score=74.28 Aligned_cols=53 Identities=17% Similarity=0.137 Sum_probs=46.5
Q ss_pred CccchhhhccCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhC
Q 032533 24 EFQDYYKILEVDYD---ATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLS 80 (139)
Q Consensus 24 ~~~d~Y~iLgv~~~---as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~ 80 (139)
...+.|.||||++. ++.++|+++||+|...+|||+.+ . ......|++|.++|.
T Consensus 2 t~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~ 57 (65)
T 2guz_B 2 TLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLK 57 (65)
T ss_dssp CHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHH
Confidence 45688999999998 99999999999999999999954 3 367888999999985
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=93.06 E-value=0.035 Score=47.38 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=38.5
Q ss_pred CCCccchhhhccCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHH
Q 032533 22 NMEFQDYYKILEVDYDATD--EKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAV 78 (139)
Q Consensus 22 ~~~~~d~Y~iLgv~~~as~--~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~i 78 (139)
....+|+|.+||++.+... .+|++|||++++..+++ .+++..|..|..|
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 3445679999999776655 67999999999976554 3788899988876
No 37
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=32.12 E-value=21 Score=24.73 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=27.1
Q ss_pred hhhhccCCCCCCHHHHHHHHHHHHHHhCCCC
Q 032533 28 YYKILEVDYDATDEKIRLNYRKLALKWHPDK 58 (139)
Q Consensus 28 ~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk 58 (139)
++..|.|....+.++++++-..+..+.||+-
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 3677778888899999999999999999984
No 38
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=27.48 E-value=68 Score=18.39 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.+|..++.-||+.. ..+.-+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH-----NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSC-----HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4566777788888863 3477888999999998665544333
No 39
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=25.37 E-value=1.1e+02 Score=17.83 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.+|...+.-||+.. ..+.-+.|.+.|..|++ |..|.
T Consensus 15 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 15 LNSARESIKRENPGIK-----VTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHHSSSCC-----HHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHcCCc---hHHHH
Confidence 4556677778899863 35788899999999987 66665
No 40
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=24.67 E-value=43 Score=21.66 Aligned_cols=22 Identities=18% Similarity=0.326 Sum_probs=19.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCC
Q 032533 37 DATDEKIRLNYRKLALKWHPDK 58 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~HPDk 58 (139)
+-++.+|+.+|+.|.+.+|--+
T Consensus 67 Nks~nqV~~RFq~Lm~Lf~~~~ 88 (95)
T 1ug2_A 67 NKTPVEVSHRFRELMQLFHTAC 88 (95)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999998665
No 41
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=24.00 E-value=1.1e+02 Score=17.79 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLD 87 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~ 87 (139)
.+.+|..++.-||+... .+.-+.|.+.|..|++.++...
T Consensus 16 ~~~~r~~~~~~~p~~~~-----~eisk~lg~~Wk~ls~~eK~~y 54 (76)
T 1hry_A 16 SRDQRRKMALENPRMRN-----SEISKQLGYQWKMLTEAEKWPF 54 (76)
T ss_dssp HHHHHHHHHHHCSCCSS-----SHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCH-----HHHHHHHHhHHHhCCHHHHHHH
Confidence 34566667777998632 2677889999999976554433
No 42
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=22.67 E-value=1.4e+02 Score=18.18 Aligned_cols=53 Identities=6% Similarity=0.128 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCC--hhHHHHHHHHHHHHHHhCCc-hhhhhhhc
Q 032533 37 DATDEKIRLNYRKLALKWHPDKHNGD--SAVTAKFQEINEAYAVLSDP-DKRLDYDF 90 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~HPDk~~~~--~~a~~~f~~i~~Ay~iL~dp-~~R~~YD~ 90 (139)
..-...++.+++.+.+...|...... ..+..+|.... +|..+.+. .++.+|+.
T Consensus 5 ~~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFee 60 (77)
T 2cqn_A 5 SSGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKD 60 (77)
T ss_dssp CCSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHH
Confidence 34567889999999888877764433 24555555554 78888664 55555553
No 43
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=22.66 E-value=1.1e+02 Score=18.13 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.+|..++.-||+.. ..+.-+.|.+.|..|++.++....+
T Consensus 18 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~~eK~~y~~ 58 (83)
T 3f27_D 18 AKDERKRLAQQNPDLH-----NAELSKMLGKSWKALTLAEKRPFVE 58 (83)
T ss_dssp HHHHHHHHHHHCSSSC-----HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4566777888899863 3478888999999998665544333
No 44
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=22.58 E-value=1.3e+02 Score=18.25 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhhcc
Q 032533 37 DATDEKIRLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYDFT 91 (139)
Q Consensus 37 ~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD~~ 91 (139)
+.+...+.+.|-++... +|+..- .|++|-+.|.=.++|+.||..
T Consensus 9 ~~SL~~lt~kFi~l~~~-~~~~~i----------~l~~aa~~L~v~~kRRiYDI~ 52 (76)
T 1cf7_A 9 EKSLGLLTTKFVSLLQE-AKDGVL----------DLKLAADTLAVRQKRRIYDIT 52 (76)
T ss_dssp TTCHHHHHHHHHHHHHH-SSTTEE----------EHHHHHHHTTTCCTHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHh-CCCCcC----------cHHHHHHHhCCccceehhhHH
Confidence 55777888888887765 344311 166777777654799999964
No 45
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=22.35 E-value=1.4e+02 Score=18.20 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+..|...+.-||+.. ..+.-+.|.+.|..|++.++....+
T Consensus 19 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~eeK~~Y~~ 59 (92)
T 2crj_A 19 LNERREQIRTRHPDLP-----FPEITKMLGAEWSKLQPAEKQRYLD 59 (92)
T ss_dssp HHHHHHHHHHHCTTCC-----HHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3556677777889863 3578889999999998777665555
No 46
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=21.73 E-value=71 Score=19.25 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=17.3
Q ss_pred ccCCCCCCHHHHHHHHHHHH
Q 032533 32 LEVDYDATDEKIRLNYRKLA 51 (139)
Q Consensus 32 Lgv~~~as~~eIk~ayr~la 51 (139)
=||+.+++.++|+..+.+.-
T Consensus 7 ~nLp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 7 RMLPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp ETCCSSCCHHHHHHHHHHHT
T ss_pred eCCCCCCCHHHHHHHHHHhC
Confidence 38999999999999998764
No 47
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=21.49 E-value=1.3e+02 Score=17.84 Aligned_cols=41 Identities=24% Similarity=0.242 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.+|..++.-||+... .+.-+.|.+.|..|++.++....+
T Consensus 19 ~~~~r~~~~~~~p~~~~-----~eisk~lg~~Wk~ls~~eK~~y~~ 59 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDN-----RGATKILADWWAVLDPKEKQKYTD 59 (82)
T ss_dssp HHHHHHHHHHHCSSSCT-----THHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHhhCCHHHHHHHHH
Confidence 35567777788998632 367788999999998655443333
No 48
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=20.81 E-value=1.1e+02 Score=18.12 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHhCCchhhhhhh
Q 032533 44 RLNYRKLALKWHPDKHNGDSAVTAKFQEINEAYAVLSDPDKRLDYD 89 (139)
Q Consensus 44 k~ayr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~iL~dp~~R~~YD 89 (139)
.+.+|..++.-||+.. ..+.-+.|.+.|..|++.++...++
T Consensus 16 ~~~~r~~~~~~~p~~~-----~~eisk~lg~~Wk~ls~eeK~~y~~ 56 (81)
T 1i11_A 16 AKDERRKILQAFPDMH-----NSNISKILGSRWKAMTNLEKQPYYE 56 (81)
T ss_dssp HHHHHHHHHTTCSSCC-----HHHHHHHHHHHHTTSCSGGGHHHHH
T ss_pred HHHHHHHHHHHCCCCC-----HHHHHHHHHhhhhhCCHHHHHHHHH
Confidence 3455666777788753 3477889999999998766654444
Done!