BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032536
(139 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++S + V G++ F Q +G T V G I+GLKPGLHGFH+HALGDTTNGC STGPHFNP
Sbjct: 7 VLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPA 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
K+HG+P D RH GDLGNI G DG A +I D+ +
Sbjct: 67 GKEHGSPEDETRHAGDLGNITVGDDGTACFTIVDKQI 103
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 115 bits (288), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G ++V+G + Q +G T V +I+GL PG HGFH+H GDTTNGC STGPHFNP
Sbjct: 8 VLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPD 67
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
KK HGAP D RH GDLGNIVA DGVAE +I D +
Sbjct: 68 KKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQI 104
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 113 bits (282), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHV-KGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G++HF Q +G V G+ITGL G HGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P+D ERH GDLGN+ AG DGVA VSI DR+++
Sbjct: 67 HSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVIS 105
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 112 bits (280), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ AG DGVA VSI DR+++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTAGKDGVANVSIEDRVIS 105
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 112 bits (279), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G ++V+G + Q +G T V +ITGL PGLHGFH+H GDTTNGC STG HFNP
Sbjct: 8 VLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPN 67
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
K HGAP D RH GDLGNIVA DGVAEV++ D +
Sbjct: 68 KLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQI 104
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 108 bits (271), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
+++G VKG + F Q NG HV + +GLK G HGFH+H GDTTNGC S G HFNP
Sbjct: 9 VMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNP 68
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K++HGAP D+ RH GDLGN+VAG DG A + D++++
Sbjct: 69 TKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLIS 107
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 108 bits (271), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHV-KGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G++HF Q +G V G+ITGL G HGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P+D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 HSKKHGGPADEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 108 bits (270), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
+++G+ VKG +HF Q G V+GKI GL GLHGFHIH GD TNGC S G HFNP
Sbjct: 6 VLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPE 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K+HGAP D +RH GDLGN+ A GVA+ I D +++
Sbjct: 66 NKNHGAPGDTDRHVGDLGNVTA-EGGVAQFKITDSLIS 102
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I G+ GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G VKG +HF Q + V V + GLKPG HGFH+H GDTT GC S G HFNP
Sbjct: 6 VMRGEEGVKGVVHFTQAGDAVK-VHAEFEGLKPGKHGFHVHEFGDTTQGCTSAGAHFNPH 64
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K+HGAP ERH GDLGN+ AG DG A + + D+M++
Sbjct: 65 GKNHGAPDAAERHVGDLGNVTAGADGKATLDLTDKMIS 102
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I G+ GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 106 bits (265), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEASGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG PSD+ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPSDDERHVGDLGNVTADKNGVAIVDIVDPLIS 103
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G + V G++H + + VT V G+ITGL PG HGFH+H GD TNGC S G HFNP
Sbjct: 7 VLKGDSPVTGTIHLKEEGDMVT-VTGEITGLTPGKHGFHVHEFGDNTNGCTSAGGHFNPH 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
K+HGAP D RH GDLGN+VAG DG A +++ D++V
Sbjct: 66 GKEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLV 102
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A D VA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVIS 105
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A D VA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVIS 106
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A D VA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVIS 106
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VS D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSTEDSVIS 105
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 105 bits (263), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 105 bits (263), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 13 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 72
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A D VA+VSI D +++
Sbjct: 73 LSRKHGGPKDEERHVGDLGNVTADKDAVADVSIEDSVIS 111
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 105 bits (263), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ER GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF +H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ER GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERRVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 105 bits (263), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG PSD ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPSDEERHVGDLGNVTADSNGVAIVDIVDPLIS 103
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDL N+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVIS 106
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDL N+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVIS 105
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDL N+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVIS 106
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDL N+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVIS 105
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I L GLHGFH+H GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 13 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 72
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDL N+ A DGVA+VSI D +++
Sbjct: 73 LSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVIS 111
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T G S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 104 bits (260), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLIS 104
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++SG V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLSGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPKDEERHVGDLGNVTADSNGVAIVDIVDPLIS 103
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + GD T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 106
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H GD T GC S GPHFNP
Sbjct: 8 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNP 67
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ER G LGN+ A DGVA+VSI D +++
Sbjct: 68 LSRKHGGPKDEERSVGSLGNVTADKDGVADVSIEDSVIS 106
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D+ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLIS 103
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D+ERH GDLGN+ A +GVA V I D +++
Sbjct: 67 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLIS 104
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 102 bits (255), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D+ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPKDDERHVGDLGNVTADKNGVAIVDIVDPLIS 103
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLIS 104
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLIS 104
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 7 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 65
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 66 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLIS 103
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 102 bits (253), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G V+G++HF + V V G ITGL G HGFH+H GD T GC S GPHFNPL
Sbjct: 8 VLKGDGPVQGTIHFEAKGDTVV-VTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPL 66
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
K HG P D ERH GDLGN+ A +GVA V I D +++
Sbjct: 67 SKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLIS 104
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 21 SVKGSLHFVQ-GPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHG 79
+V G++ Q N ++G+I GL PGLHGFH+H GD+TNGC S GPHFNP K HG
Sbjct: 12 TVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHG 71
Query: 80 APSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P RH GDLGN+ AG DGVA++ + D +V
Sbjct: 72 GPKSEIRHVGDLGNVEAGADGVAKIKLTDTLV 103
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 99.8 bits (247), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGF + D T GC S GPHFNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAGPHFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + HG P D ERH GDLGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVIS 105
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 15 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H D T GC S GP FNP
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPSFNP 66
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
L + G P D ER G LGN+ A DGVA+VSI D +++
Sbjct: 67 LSRKSGGPKDEERSVGSLGNVTADKDGVADVSIEDSVIS 105
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 92.0 bits (227), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 21 SVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGA 80
+++G++ F Q +G HV+G ITGL PG +GFH+H GD + GC STG HFNP KDHG
Sbjct: 19 TIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGH 78
Query: 81 PSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
P+D RH GDLGN+V + + + + D ++
Sbjct: 79 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQIS 110
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 21 SVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGA 80
+++G++ F Q +G HV+G ITGL PG +GFH+H GD + GC STG HFNP KDHG
Sbjct: 18 TIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGH 77
Query: 81 PSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
P+D RH GDLGN+V + + + + D ++
Sbjct: 78 PNDVNRHVGDLGNVVFDENHYSRIDLVDDQIS 109
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPL 74
++ G +V+G + F+Q ++G I GL+PGLHG H+H GD TN CNS G HFNP
Sbjct: 9 ILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 68
Query: 75 KKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
HG P D++RH GDLGN+ A DG A + D +
Sbjct: 69 GASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQL 105
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 38 VKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAG 97
V G++ GL G HGFH+H GD TNGC S G HFNP K+DHG PS RH GDLGNI A
Sbjct: 30 VSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 89
Query: 98 PD-GVAEVSIADRMVN 112
D GV +VSI D ++
Sbjct: 90 EDAGVTKVSIQDSQIS 105
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 89.0 bits (219), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 38 VKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAG 97
V G++ GL G HGFH+H GD TNGC S G HFNP K+DHG PS RH GDLGNI A
Sbjct: 30 VSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAI 89
Query: 98 PD-GVAEVSIADRMVN 112
D GV +VSI D ++
Sbjct: 90 EDSGVTKVSIQDSQIS 105
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 104
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 105
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 84.3 bits (207), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIQEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 105
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+ N+ +GVA+ S D ++
Sbjct: 67 PFKKTHGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLI 105
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIFEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 104
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GF IH GD TNGC S GPHFN
Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFCIHEFGDATNGCVSAGPHFN 66
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 67 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 105
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 82.8 bits (203), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 15 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFN 72
++ G V G + F Q T V +I G P GFHI GD TNGC S GPHFN
Sbjct: 6 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHICEFGDATNGCVSAGPHFN 65
Query: 73 PLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMV 111
P KK HGAP+D RH GD+GN+ +GVA+ S D ++
Sbjct: 66 PFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLI 104
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 15 LISGATSVKGSLHFVQGPNG--VTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHF 71
++ G + V+G + F Q +G VT V G+I + GFH+H GD +NGC S GPHF
Sbjct: 10 VLKGDSPVQGVITFTQESSGGPVT-VSGEIKNMDANAQRGFHVHQFGDNSNGCTSAGPHF 68
Query: 72 NPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
NP +HG + RH GDLGN+ GVA+V I+D ++
Sbjct: 69 NPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLS 109
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 31/99 (31%)
Query: 15 LISGATSVKGSLHFVQG-PNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GLHGFH+H G
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG--------------- 51
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
GDLGN+ A DGVA+VSI D +++
Sbjct: 52 ---------------GDLGNVTADKDGVADVSIEDSVIS 75
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 50 HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIV 95
H+H GD + GC STGPH+NPL H +H GD GN
Sbjct: 93 RAIHVHQFGDLSQGCESTGPHYNPLAVPH------PQHPGDFGNFA 132
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 31/99 (31%)
Query: 15 LISGATSVKGSLHFVQG-PNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNP 73
++ G V+G ++F Q NG V G I GL GL GFH+H G
Sbjct: 7 VLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLFGFHVHGAG--------------- 51
Query: 74 LKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVN 112
GDLGN+ A DGVA+VSI D +++
Sbjct: 52 ---------------GDLGNVTADKDGVADVSIEDSVIS 75
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHIH G S G HFNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV 104
+V
Sbjct: 116 DV 117
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G HFNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIYEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV 104
+V
Sbjct: 116 DV 117
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G FNPL K+HG + H GDL N+ G DG
Sbjct: 43 LRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 102
Query: 103 EV 104
+V
Sbjct: 103 DV 104
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 42 ITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLKKD-HGAPSDNERHTGDLG 92
+TGL PG+HGFH+H G + G H +P K H P +++ H GDL
Sbjct: 51 LTGLAPGIHGFHLHEKPSCAPGMKDGKAVPALAAGGHLDPNKTGVHLGPYNDKGHLGDLP 110
Query: 93 NIVAGPDGVAEVSI 106
+V DG A +
Sbjct: 111 GLVVNADGTATYPV 124
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVAFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPYTDDNHKGDLPALFVSANGLA 103
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 45 LKPGLH-GFHIHALGDTTN-GCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVA 102
L+PG GFHI+ G S G FNPL K+HG + H GDL N+ G DG
Sbjct: 56 LRPGASLGFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKV 115
Query: 103 EV 104
+V
Sbjct: 116 DV 117
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGIHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNDYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPFTDDNHKGDLPALFVSANGLA 103
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVGFIP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV ++ L PG+HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFTP-ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G+ T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGELTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNS-------- 66
L SG G + + P G+ + GL PG+HGFH+H G
Sbjct: 11 LSSGTGENIGEITVSETPYGLLFTP-HLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALM 69
Query: 67 TGPHFNPLKK-DHGAPSDNERHTGDLGNIVAGPDGVAEVSI 106
G H +P K H P +++ H GDL +V DG A +
Sbjct: 70 AGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPL 110
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 24 GSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------STGPHFNPLK 75
G++ Q GV + ++ L PG HGFHIH G + + G H++P
Sbjct: 17 GTIELSQNKYGVVFIP-ELADLTPGEHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEH 75
Query: 76 KD-HGAPSDNERHTGDLGNIVAGPDGVA 102
+ HG P ++ H GDL + +G+A
Sbjct: 76 TNKHGFPWTDDNHKGDLPALFVSANGLA 103
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGQLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 15 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCN--------S 66
L +G G++ + P G+ H K + L PG HGFH+H G +
Sbjct: 11 LPTGPGKEVGTVVISEAPGGL-HFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALA 69
Query: 67 TGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMVNGLINKNFRSV 122
G H++P H + + H GDL + A DG ++ + L RS+
Sbjct: 70 AGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSL 125
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEQEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSAGLHGFHIHENPSCEPKEKEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIH---------ALGDTTNGCNSTGPHFNPL-KKDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G T G + G H++P K HG P ++ H GDL
Sbjct: 46 LQGLSEGLHGFHIHENPSCEPKEEEGKLTAGLGAGG-HWDPKGAKQHGYPWQDDAHLGDL 104
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 105 PALTVLHDGTA 115
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 42 ITGLKPGLHGFHIHALGD--------TTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGN 93
+ L PG HGFHIHA G + S G H +P + H GDL
Sbjct: 37 LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA 96
Query: 94 IVAGPDGVA-EVSIADRM 110
+V DG A + IA R+
Sbjct: 97 LVVNNDGKATDAVIAPRL 114
>pdb|2APS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
pdb|2APS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
Length = 162
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 42 ITGLKPGLHGFHIHA---------LGDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGDL 91
+ GL GLHGFHIH G G + G H++P + K HG P + H GDL
Sbjct: 44 LHGLAQGLHGFHIHQNPSCEPKEKDGKLVAGLGAGG-HWDPKETKQHGYPWSDNAHLGDL 102
Query: 92 GNIVAGPDGVA 102
+ DG A
Sbjct: 103 PALFVEHDGSA 113
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 42 ITGLKPGLHGFHIHALGDTTN--------GCNSTGPHFNPLKKDHGAPSDNERHTGDLGN 93
+ L PG HGFHIHA G + G H +P + + H GDL
Sbjct: 37 LKALPPGEHGFHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNTGKHEGPEGQGHLGDLPV 96
Query: 94 IVAGPDGVA-EVSIADRM 110
+V DG+A E A R+
Sbjct: 97 LVVNNDGIATEPVTAPRL 114
>pdb|1Z9N|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|C Chain C, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|D Chain D, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
Length = 177
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 41 KITGLKPGLHGFHIHAL---------GDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGD 90
K+ L GLHGFHIH G G + G H++P + + HG P ++ H GD
Sbjct: 58 KLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGAGG-HWDPKQTQKHGYPWSDDAHMGD 116
Query: 91 LGNIVAGPDGVAEVSI 106
L + DG A +
Sbjct: 117 LPALFVMHDGSATTPV 132
>pdb|1Z9P|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
pdb|1Z9P|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
Length = 155
Score = 32.7 bits (73), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 41 KITGLKPGLHGFHIHAL---------GDTTNGCNSTGPHFNPLK-KDHGAPSDNERHTGD 90
K+ L GLHGFHIH G G + G H++P + + HG P ++ H GD
Sbjct: 36 KLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGAGG-HWDPKQTQKHGYPWSDDAHMGD 94
Query: 91 LGNIVAGPDGVAEVSI 106
L + DG A +
Sbjct: 95 LPALFVMHDGSATTPV 110
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 26 LHFVQGPNGVTHVKGKITGLKPGLHGFHIHALG 58
F G VT + L PG HG HIH +G
Sbjct: 57 FEFANGYATVTIATTGVGKLTPGFHGLHIHQVG 89
>pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests
Advantages Of Chemotherapy With Noncompetitive
Inhibitors
pdb|1YPV|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt
Conditions
pdb|2ONB|A Chain A, Human Thymidylate Synthase At Low Salt Conditions With
Pdpa Bound
Length = 313
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With
Loop 181- 197 Stabilized In The Inactive Conformation
Length = 313
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3N5G|A Chain A, Crystal Structure Of Histidine-Tagged Human Thymidylate
Synthase
Length = 325
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 245 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 278
>pdb|3N5E|A Chain A, Crystal Structure Of Human Thymidylate Synthase Bound To A
Peptide Inhibitor
Length = 325
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 245 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 278
>pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|4E28|A Chain A, Structure Of Human Thymidylate Synthase In Inactive
Conformation With A Novel Non-Peptidic Inhibitor
Length = 325
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 245 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 278
>pdb|3N5E|B Chain B, Crystal Structure Of Human Thymidylate Synthase Bound To A
Peptide Inhibitor
Length = 325
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 245 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 278
>pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With
Loop 181- 197 Stabilized In The Inactive Conformation
Length = 313
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase
pdb|1HZW|B Chain B, Crystal Structure Of Human Thymidylate Synthase
pdb|1I00|A Chain A, Crystal Structure Of Human Thymidylate Synthase, Ternary
Complex With Dump And Tomudex
pdb|1I00|B Chain B, Crystal Structure Of Human Thymidylate Synthase, Ternary
Complex With Dump And Tomudex
Length = 290
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 210 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 243
>pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of
Chemotherapy With Noncompetitive Inhibitors
Length = 355
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 275 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 308
>pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
Length = 313
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3GH0|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 295
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 215 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 248
>pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And
Raltitrexed, An Antifolate Drug, Is In The Closed
Conformation
pdb|1HVY|B Chain B, Human Thymidylate Synthase Complexed With Dump And
Raltitrexed, An Antifolate Drug, Is In The Closed
Conformation
pdb|1HVY|C Chain C, Human Thymidylate Synthase Complexed With Dump And
Raltitrexed, An Antifolate Drug, Is In The Closed
Conformation
pdb|1HVY|D Chain D, Human Thymidylate Synthase Complexed With Dump And
Raltitrexed, An Antifolate Drug, Is In The Closed
Conformation
Length = 288
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 208 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 241
>pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514,
A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JU6|B Chain B, Human Thymidylate Synthase Complex With Dump And Ly231514,
A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JU6|C Chain C, Human Thymidylate Synthase Complex With Dump And Ly231514,
A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JU6|D Chain D, Human Thymidylate Synthase Complex With Dump And Ly231514,
A Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JUJ|A Chain A, Human Thymidylate Synthase Bound To Dump And Ly231514, A
Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JUJ|B Chain B, Human Thymidylate Synthase Bound To Dump And Ly231514, A
Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JUJ|C Chain C, Human Thymidylate Synthase Bound To Dump And Ly231514, A
Pyrrolo(2,3-D)pyrimidine-Based Antifolate
pdb|1JUJ|D Chain D, Human Thymidylate Synthase Bound To Dump And Ly231514, A
Pyrrolo(2,3-D)pyrimidine-Based Antifolate
Length = 313
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3GG5|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3GG5|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3GG5|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3EJL|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3EJL|B Chain B, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3EJL|C Chain C, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
pdb|3EJL|D Chain D, Replacement Of Val3 In Human Thymidylate Synthase Affects
Its Kinetic Properties And Intracellular Stability
Length = 313
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|A Chain A, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|B Chain B, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|C Chain C, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|D Chain D, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|E Chain E, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|2RDA|F Chain F, Human Thymidylate Synthase Stabilized In Active
Conformation By R163k Mutation: Asymmetry And Reactivity
Of Cys195
pdb|3H9K|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3H9K|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3H9K|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3H9K|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3H9K|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3HB8|A Chain A, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3HB8|B Chain B, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3HB8|C Chain C, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3HB8|D Chain D, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3HB8|E Chain E, Structures Of Thymidylate Synthase R163k With Substrates
And Inhibitors Show Subunit Asymmetry
pdb|3OB7|A Chain A, Human Thymidylate Synthase R163k With Cys 195 Covalently
Modified By Glutathione
pdb|3OB7|B Chain B, Human Thymidylate Synthase R163k With Cys 195 Covalently
Modified By Glutathione
pdb|3OB7|C Chain C, Human Thymidylate Synthase R163k With Cys 195 Covalently
Modified By Glutathione
pdb|3OB7|D Chain D, Human Thymidylate Synthase R163k With Cys 195 Covalently
Modified By Glutathione
pdb|3OB7|E Chain E, Human Thymidylate Synthase R163k With Cys 195 Covalently
Modified By Glutathione
Length = 313
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|4GYH|A Chain A, Structure Of Human Thymidylate Synthase At High Salt
Conditions
pdb|4H1I|A Chain A, Structure Of Human Thymidylate Synthase At Low Salt
Conditions
pdb|4H1I|B Chain B, Structure Of Human Thymidylate Synthase At Low Salt
Conditions
pdb|4H1I|C Chain C, Structure Of Human Thymidylate Synthase At Low Salt
Conditions
pdb|4H1I|D Chain D, Structure Of Human Thymidylate Synthase At Low Salt
Conditions
Length = 318
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 35 VTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLK 75
+T++ ITGLKP G IH LGD N H PLK
Sbjct: 233 LTYMIAHITGLKP---GDFIHTLGDAHIYLN----HIEPLK 266
>pdb|3NSJ|A Chain A, The X-Ray Crystal Structure Of Lymphocyte Perforin
Length = 540
Score = 25.8 bits (55), Expect = 8.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 84 NERHTGDLGNIVAGPDGVAEVSIADRMVNGLINKNFRSVHCRLYEIRLV 132
N R ++ VAG A++ N N +V CR+Y RLV
Sbjct: 115 NPRPEANMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLV 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,449,560
Number of Sequences: 62578
Number of extensions: 198586
Number of successful extensions: 597
Number of sequences better than 100.0: 135
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 457
Number of HSP's gapped (non-prelim): 136
length of query: 139
length of database: 14,973,337
effective HSP length: 89
effective length of query: 50
effective length of database: 9,403,895
effective search space: 470194750
effective search space used: 470194750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)