Your job contains 1 sequence.
>032537
MKSWMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTS
RGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEY
AKQFPTIGFEKETMKYKS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032537
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005518 - symbol:SHM1 "serine transhydroxymeth... 507 1.4e-48 1
TAIR|locus:2148463 - symbol:SHM2 "serine hydroxymethyltra... 498 1.2e-47 1
UNIPROTKB|Q3SZ20 - symbol:SHMT2 "Serine hydroxymethyltran... 281 4.5e-24 1
UNIPROTKB|F1SL74 - symbol:LOC100626911 "Serine hydroxymet... 278 9.8e-24 1
UNIPROTKB|Q4KLG7 - symbol:Shmt1 "Serine hydroxymethyltran... 272 1.1e-23 1
UNIPROTKB|Q60V73 - symbol:mel-32 "Serine hydroxymethyltra... 277 1.3e-23 1
UNIPROTKB|B4DPM9 - symbol:SHMT1 "Serine hydroxymethyltran... 268 2.9e-23 1
WB|WBGene00003214 - symbol:mel-32 species:6239 "Caenorhab... 273 3.5e-23 1
UNIPROTKB|P50432 - symbol:mel-32 "Serine hydroxymethyltra... 273 3.5e-23 1
RGD|1312011 - symbol:Shmt1 "serine hydroxymethyltransfera... 272 1.0e-22 1
UNIPROTKB|P34896 - symbol:SHMT1 "Serine hydroxymethyltran... 268 1.0e-22 1
UNIPROTKB|B4DLV4 - symbol:SHMT2 "Serine hydroxymethyltran... 264 1.2e-22 1
UNIPROTKB|G4MRB4 - symbol:MGG_13781 "Serine hydroxymethyl... 266 2.2e-22 1
UNIPROTKB|P34897 - symbol:SHMT2 "Serine hydroxymethyltran... 264 3.4e-22 1
CGD|CAL0003822 - symbol:SHM1 species:5476 "Candida albica... 261 6.8e-22 1
UNIPROTKB|Q59PP7 - symbol:SHM1 "Putative uncharacterized ... 261 6.8e-22 1
MGI|MGI:98299 - symbol:Shmt1 "serine hydroxymethyltransfe... 260 7.8e-22 1
RGD|1308582 - symbol:Shmt2 "serine hydroxymethyltransfera... 258 1.6e-21 1
UNIPROTKB|Q5E9P9 - symbol:SHMT1 "Serine hydroxymethyltran... 256 2.2e-21 1
POMBASE|SPAC18G6.04c - symbol:shm2 "serine hydroxymethylt... 256 2.3e-21 1
TAIR|locus:2127806 - symbol:SHM3 "serine hydroxymethyltra... 252 8.2e-21 1
ZFIN|ZDB-GENE-071213-1 - symbol:shmt2 "serine hydroxymeth... 251 8.4e-21 1
POMBASE|SPAC24C9.12c - symbol:SPAC24C9.12c "glycine hydro... 250 9.1e-21 1
UNIPROTKB|P14519 - symbol:SHMT2 "Serine hydroxymethyltran... 250 1.2e-20 1
UNIPROTKB|E1BS67 - symbol:SHMT1 "Uncharacterized protein"... 249 1.3e-20 1
ZFIN|ZDB-GENE-040426-1558 - symbol:shmt1 "serine hydroxym... 246 3.2e-20 1
SGD|S000000467 - symbol:SHM1 "Mitochondrial serine hydrox... 245 3.8e-20 1
UNIPROTKB|E2RIV3 - symbol:SHMT1 "Uncharacterized protein"... 239 1.7e-19 1
CGD|CAL0001464 - symbol:SHM2 species:5476 "Candida albica... 238 2.0e-19 1
UNIPROTKB|O13426 - symbol:SHM2 "Serine hydroxymethyltrans... 238 2.0e-19 1
FB|FBgn0029823 - symbol:CG3011 species:7227 "Drosophila m... 239 2.2e-19 1
ASPGD|ASPL0000040474 - symbol:AN3058 species:162425 "Emer... 237 2.5e-19 1
ASPGD|ASPL0000008876 - symbol:AN10745 species:162425 "Eme... 237 4.7e-19 1
DICTYBASE|DDB_G0291652 - symbol:shmt2 "serine hydroxymeth... 232 9.6e-19 1
UNIPROTKB|G4NDG3 - symbol:MGG_00923 "Serine hydroxymethyl... 231 1.2e-18 1
UNIPROTKB|H0YIZ0 - symbol:SHMT2 "Serine hydroxymethyltran... 223 1.7e-18 1
UNIPROTKB|E2R4L7 - symbol:SHMT2 "Uncharacterized protein"... 230 2.1e-18 1
TAIR|locus:2129251 - symbol:SHM4 "serine hydroxymethyltra... 228 2.5e-18 1
SGD|S000004048 - symbol:SHM2 "Cytosolic serine hydroxymet... 225 5.2e-18 1
TAIR|locus:2119545 - symbol:EDA36 "EMBRYO SAC DEVELOPMENT... 224 6.7e-18 1
DICTYBASE|DDB_G0277947 - symbol:shmt1 "serine hydroxymeth... 203 1.2e-15 1
TAIR|locus:2035937 - symbol:SHM7 "serine hydroxymethyltra... 181 5.1e-13 1
GENEDB_PFALCIPARUM|PFL1720w - symbol:PFL1720w "Serine hyd... 178 6.1e-13 1
UNIPROTKB|Q8I566 - symbol:PFL1720w "Serine hydroxymethylt... 178 6.1e-13 1
TAIR|locus:2030581 - symbol:SHM6 "serine hydroxymethyltra... 149 1.4e-09 1
UNIPROTKB|O53441 - symbol:glyA1 "Serine hydroxymethyltran... 126 2.6e-09 2
TIGR_CMR|CBU_1419 - symbol:CBU_1419 "serine hydroxymethyl... 137 1.6e-08 1
UNIPROTKB|O53615 - symbol:glyA2 "Serine hydroxymethyltran... 133 4.4e-08 1
TIGR_CMR|SPO_1572 - symbol:SPO_1572 "serine hydroxymethyl... 130 9.4e-08 1
TIGR_CMR|SPO_2940 - symbol:SPO_2940 "serine hydroxymethyl... 130 9.4e-08 1
UNIPROTKB|Q9KMP4 - symbol:glyA2 "Serine hydroxymethyltran... 130 9.6e-08 1
TIGR_CMR|VC_A0278 - symbol:VC_A0278 "serine hydroxymethyl... 130 9.6e-08 1
TIGR_CMR|CHY_2557 - symbol:CHY_2557 "serine hydroxymethyl... 129 1.2e-07 1
UNIPROTKB|Q9KTG1 - symbol:glyA1 "Serine hydroxymethyltran... 128 1.5e-07 1
TIGR_CMR|VC_0941 - symbol:VC_0941 "serine hydroxymethyltr... 128 1.5e-07 1
TIGR_CMR|CJE_0451 - symbol:CJE_0451 "serine hydroxymethyl... 125 3.1e-07 1
TIGR_CMR|CPS_2477 - symbol:CPS_2477 "serine hydroxymethyl... 122 6.6e-07 1
TIGR_CMR|CPS_4031 - symbol:CPS_4031 "serine hydroxymethyl... 122 6.6e-07 1
TIGR_CMR|BA_5558 - symbol:BA_5558 "serine hydroxymethyltr... 120 1.1e-06 1
TIGR_CMR|CPS_3844 - symbol:CPS_3844 "serine hydroxymethyl... 120 1.1e-06 1
TIGR_CMR|CPS_0728 - symbol:CPS_0728 "serine hydroxymethyl... 119 1.4e-06 1
UNIPROTKB|P0A825 - symbol:glyA species:83333 "Escherichia... 114 4.8e-06 1
TIGR_CMR|APH_0154 - symbol:APH_0154 "serine hydroxymethyl... 111 1.0e-05 1
TIGR_CMR|SO_3471 - symbol:SO_3471 "serine hydroxymethyltr... 110 1.3e-05 1
UNIPROTKB|A8MYA6 - symbol:SHMT1 "Serine hydroxymethyltran... 90 1.5e-05 2
TIGR_CMR|GSU_1607 - symbol:GSU_1607 "serine hydroxymethyl... 109 1.7e-05 1
TIGR_CMR|DET_0436 - symbol:DET_0436 "Serine hydroxymethyl... 104 5.8e-05 1
>TAIR|locus:2005518 [details] [associations]
symbol:SHM1 "serine transhydroxymethyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;TAS]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0019464 "glycine
decarboxylation via glycine cleavage system" evidence=IMP]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=TAS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0046686 "response to cadmium
ion" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP;RCA]
[GO:0010319 "stromule" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009853 "photorespiration" evidence=IMP]
[GO:0016020 "membrane" evidence=IDA] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009814 "defense response, incompatible
interaction" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005886
GO:GO:0005634 GO:GO:0046686 GO:GO:0009570 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161592 GO:GO:0008266 GO:GO:0005759 GO:GO:0048046
GO:GO:0009409 GO:GO:0009626 EMBL:AL035538 GO:GO:0009853
GO:GO:0009534 GO:GO:0022626 GO:GO:0010319 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 EMBL:AJ271726
EMBL:AY054254 EMBL:AY057645 EMBL:AY070726 EMBL:AF428388
EMBL:BT006353 IPI:IPI00525727 PIR:T05620 RefSeq:NP_195506.1
UniGene:At.21766 ProteinModelPortal:Q9SZJ5 SMR:Q9SZJ5 IntAct:Q9SZJ5
STRING:Q9SZJ5 PaxDb:Q9SZJ5 PRIDE:Q9SZJ5 ProMEX:Q9SZJ5
EnsemblPlants:AT4G37930.1 GeneID:829949 KEGG:ath:AT4G37930
TAIR:At4g37930 InParanoid:Q9SZJ5 PhylomeDB:Q9SZJ5
ProtClustDB:PLN03226 BioCyc:MetaCyc:AT4G37930-MONOMER
Genevestigator:Q9SZJ5 GermOnline:AT4G37930 Uniprot:Q9SZJ5
Length = 517
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 100/124 (80%), Positives = 113/124 (91%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+GIDGSRVEKVLEAVHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA +F
Sbjct: 394 KGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYF 453
Query: 76 DAAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFEKETM 134
D AV + +K+KSE QGTKLKDFV+ +S++ QSEIAK H+VEE+AKQFPTIGFEKETM
Sbjct: 454 DKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETM 513
Query: 135 KYKS 138
KYK+
Sbjct: 514 KYKN 517
>TAIR|locus:2148463 [details] [associations]
symbol:SHM2 "serine hydroxymethyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006544 "glycine metabolic
process" evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0050897 "cobalt ion binding" evidence=IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009744 "response to
sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
EMBL:CP002688 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008270 GO:GO:0050897
GO:GO:0005747 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:ERFRAIC HSSP:P07511
ProtClustDB:PLN03226 EMBL:BT001097 EMBL:BT001113 IPI:IPI00525834
RefSeq:NP_568488.2 RefSeq:NP_851081.1 UniGene:At.22652
ProteinModelPortal:Q8GRI1 STRING:Q8GRI1 PaxDb:Q8GRI1 PRIDE:Q8GRI1
EnsemblPlants:AT5G26780.2 EnsemblPlants:AT5G26780.3 GeneID:832736
KEGG:ath:AT5G26780 TAIR:At5g26780 InParanoid:Q8GRI1
PhylomeDB:Q8GRI1 Genevestigator:Q8GRI1 Uniprot:Q8GRI1
Length = 533
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 100/123 (81%), Positives = 110/123 (89%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+GIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVA +F
Sbjct: 410 KGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYF 469
Query: 76 DAAVKLTVKIKSETQGTKLKDFVATTQS-ANFQSEIAKRCHDVEEYAKQFPTIGFEKETM 134
D AVK+ +KIK+E+QGTKLKDFVAT QS QSE++K VEEYAKQFPTIGFEKETM
Sbjct: 470 DLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETM 529
Query: 135 KYK 137
+YK
Sbjct: 530 RYK 532
>UNIPROTKB|Q3SZ20 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9913 "Bos taurus" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743 GO:GO:0003682
GO:GO:0042645 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 EMBL:BC103242
IPI:IPI00718654 RefSeq:NP_001029454.1 UniGene:Bt.49106
ProteinModelPortal:Q3SZ20 SMR:Q3SZ20 STRING:Q3SZ20 PRIDE:Q3SZ20
Ensembl:ENSBTAT00000038244 GeneID:507197 KEGG:bta:507197 CTD:6472
InParanoid:Q3SZ20 OrthoDB:EOG4G4GQ7 NextBio:20867950 Uniprot:Q3SZ20
Length = 504
Score = 281 (104.0 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 57/116 (49%), Positives = 80/116 (68%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSRGF+E+DF KV F
Sbjct: 389 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFI 448
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGFE 130
D V + +++KS+T TKL+DF + + ++A VE++A+ FP GF+
Sbjct: 449 DEGVNIGLEVKSKT--TKLQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGFD 502
>UNIPROTKB|F1SL74 [details] [associations]
symbol:LOC100626911 "Serine hydroxymethyltransferase"
species:9823 "Sus scrofa" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:CU633428 EMBL:FP340566
Ensembl:ENSSSCT00000023184 Ensembl:ENSSSCT00000023666
Uniprot:F1SL74
Length = 504
Score = 278 (102.9 bits), Expect = 9.8e-24, P = 9.8e-24
Identities = 59/117 (50%), Positives = 80/117 (68%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+RVE+VLE V I ANKNT PGD SA+ PGG+R+GTPALTSR F E+DF KV F
Sbjct: 389 KGLDGARVERVLELVSITANKNTCPGDRSAITPGGLRLGTPALTSRQFREDDFRKVVAFI 448
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGFEK 131
D V + +++KS+T TKL+DF + + +A VE++A+ FP GFE+
Sbjct: 449 DEGVSIGLEVKSKT--TKLQDFKSFLLKDPETCRRLADLRQRVEQFARAFPMPGFEE 503
>UNIPROTKB|Q4KLG7 [details] [associations]
symbol:Shmt1 "Serine hydroxymethyltransferase"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
RGD:1312011 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 EMBL:BC099219
IPI:IPI00627076 UniGene:Rn.3684 STRING:Q4KLG7
Ensembl:ENSRNOT00000057973 OMA:MTPEFKL Genevestigator:Q4KLG7
Uniprot:Q4KLG7
Length = 352
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 58/115 (50%), Positives = 74/115 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF K+A+F
Sbjct: 234 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKIAHFI 293
Query: 76 DAAVKLTVKIKSE-TQGTKLKDFVAT-TQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S T LK+F T FQS +A +VE +A F G
Sbjct: 294 HRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAALREEVENFASNFSLPG 348
>UNIPROTKB|Q60V73 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6238 "Caenorhabditis briggsae" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0009069 "serine family amino
acid metabolic process" evidence=TAS] [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:HE600934 HSSP:P07511
ProteinModelPortal:Q60V73 STRING:Q60V73 PRIDE:Q60V73
EnsemblMetazoa:CBG19673 WormBase:CBG19673 GO:GO:0009069
Uniprot:Q60V73
Length = 511
Score = 277 (102.6 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 57/113 (50%), Positives = 75/113 (66%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G++G+R E +L+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F
Sbjct: 396 GVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIH 455
Query: 77 AAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
V++ K +E G LKDF A T + F+ E+A+ VEE++ +F G
Sbjct: 456 EGVQIAKKYNAEA-GKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507
>UNIPROTKB|B4DPM9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0008168 GO:GO:0035999 EMBL:AC127537 GO:GO:0008732
GO:GO:0004372 PANTHER:PTHR11680 GO:GO:0019264 HOVERGEN:HBG002807
UniGene:Hs.513987 UniGene:Hs.636044 HGNC:HGNC:10850 ChiTaRS:SHMT1
EMBL:AL353997 EMBL:AK298415 IPI:IPI01015924 SMR:B4DPM9
STRING:B4DPM9 Ensembl:ENST00000539052 Uniprot:B4DPM9
Length = 345
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F
Sbjct: 228 KGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI 287
Query: 76 DAAVKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S+T G + LK+F +Q+ + +VE +A FP G
Sbjct: 288 HRGIELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 341
>WB|WBGene00003214 [details] [associations]
symbol:mel-32 species:6239 "Caenorhabditis elegans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 273 (101.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F
Sbjct: 392 GVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIH 451
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFE 130
V++ K +E G LKDF + T++ F+ ++A VEE++ +F G E
Sbjct: 452 EGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNE 505
>UNIPROTKB|P50432 [details] [associations]
symbol:mel-32 "Serine hydroxymethyltransferase"
species:6239 "Caenorhabditis elegans" [GO:0030170 "pyridoxal
phosphate binding" evidence=TAS] [GO:0009790 "embryo development"
evidence=IMP] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=TAS] [GO:0009069 "serine family amino acid
metabolic process" evidence=TAS] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0009792 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0006544 GO:GO:0035999 EMBL:FO080365 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:ERFRAIC GeneTree:ENSGT00390000002762 GO:GO:0009069 PIR:B88483
RefSeq:NP_741197.1 RefSeq:NP_741198.1 ProteinModelPortal:P50432
SMR:P50432 DIP:DIP-26240N IntAct:P50432 MINT:MINT-227953
STRING:P50432 PaxDb:P50432 PRIDE:P50432 EnsemblMetazoa:C05D11.11b.1
EnsemblMetazoa:C05D11.11b.2 EnsemblMetazoa:C05D11.11b.3
GeneID:175915 KEGG:cel:CELE_C05D11.11 UCSC:F44F4.6 CTD:175915
WormBase:C05D11.11a WormBase:C05D11.11b InParanoid:P50432
NextBio:890288 Uniprot:P50432
Length = 507
Score = 273 (101.2 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F
Sbjct: 392 GVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIH 451
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFE 130
V++ K +E G LKDF + T++ F+ ++A VEE++ +F G E
Sbjct: 452 EGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNE 505
>RGD|1312011 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10116 "Rattus norvegicus" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISO;IDA;TAS]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA;TAS] [GO:0006544 "glycine
metabolic process" evidence=IDA;TAS] [GO:0006545 "glycine
biosynthetic process" evidence=IDA] [GO:0006563 "L-serine metabolic
process" evidence=TAS] [GO:0006565 "L-serine catabolic process"
evidence=IEA;ISO] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IDA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA;ISO] [GO:0016597 "amino acid binding" evidence=IPI]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO;IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0046655 "folic acid metabolic
process" evidence=IEA;ISO] [GO:0051262 "protein tetramerization"
evidence=ISO] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 RGD:1312011 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0009113
GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 GO:GO:0008732 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264
CTD:6470 GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 UniGene:Rn.3684 EMBL:AY383687 IPI:IPI00421364
RefSeq:NP_001041307.1 SMR:Q6TXG7 STRING:Q6TXG7
Ensembl:ENSRNOT00000007092 GeneID:287379 KEGG:rno:287379
UCSC:RGD:1312011 InParanoid:Q6TXG7 NextBio:625985
Genevestigator:Q6TXG7 Uniprot:Q6TXG7
Length = 681
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/115 (50%), Positives = 74/115 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF K+A+F
Sbjct: 563 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKIAHFI 622
Query: 76 DAAVKLTVKIKSE-TQGTKLKDFVAT-TQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S T LK+F T FQS +A +VE +A F G
Sbjct: 623 HRGIELTLQIQSHMTMRATLKEFKEKLTGDEKFQSAVAALREEVENFASNFSLPG 677
>UNIPROTKB|P34896 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008732 "L-allo-threonine aldolase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0019264 "glycine biosynthetic process from serine"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0051262 "protein tetramerization" evidence=IDA]
[GO:0046655 "folic acid metabolic process" evidence=IDA;TAS]
[GO:0030170 "pyridoxal phosphate binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA;TAS] [GO:0006565
"L-serine catabolic process" evidence=IDA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IDA] [GO:0006766 "vitamin
metabolic process" evidence=TAS] [GO:0006767 "water-soluble vitamin
metabolic process" evidence=TAS] [GO:0034641 "cellular nitrogen
compound metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0045329 "carnitine
biosynthetic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
UniPathway:UPA00193 Reactome:REACT_111217 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 EMBL:L11931
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0042803
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 DrugBank:DB00114
GO:GO:0016597 GO:GO:0051289 GO:GO:0045329 DrugBank:DB00145
DrugBank:DB00116 EMBL:CH471196 GO:GO:0009113 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 DrugBank:DB01055 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470 HOVERGEN:HBG002807
OrthoDB:EOG42Z4Q2 EMBL:L23928 EMBL:Y14485 EMBL:Y14486 EMBL:Y14487
EMBL:BC007979 EMBL:BC022874 EMBL:BC038598 IPI:IPI00002519
IPI:IPI00220668 IPI:IPI00220669 PIR:A46746 RefSeq:NP_004160.3
RefSeq:NP_683718.1 UniGene:Hs.513987 UniGene:Hs.636044 PDB:1BJ4
PDBsum:1BJ4 ProteinModelPortal:P34896 SMR:P34896 IntAct:P34896
STRING:P34896 PhosphoSite:P34896 DMDM:462184 PaxDb:P34896
PRIDE:P34896 DNASU:6470 Ensembl:ENST00000316694
Ensembl:ENST00000352886 Ensembl:ENST00000354098 GeneID:6470
KEGG:hsa:6470 UCSC:uc002gsz.3 UCSC:uc002gtb.3 GeneCards:GC17M018231
HGNC:HGNC:10850 HPA:HPA023314 MIM:182144 neXtProt:NX_P34896
PharmGKB:PA35753 InParanoid:P34896 OMA:VDLRESH BindingDB:P34896
ChEMBL:CHEMBL1772927 ChiTaRS:SHMT1 EvolutionaryTrace:P34896
GenomeRNAi:6470 NextBio:25133 ArrayExpress:P34896 Bgee:P34896
CleanEx:HS_SHMT1 Genevestigator:P34896 GermOnline:ENSG00000176974
Uniprot:P34896
Length = 483
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F
Sbjct: 366 KGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI 425
Query: 76 DAAVKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S+T G + LK+F +Q+ + +VE +A FP G
Sbjct: 426 HRGIELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 479
>UNIPROTKB|B4DLV4 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0015630 EMBL:CH471054 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807
EMBL:AC137834 UniGene:Hs.741179 HGNC:HGNC:10852 ChiTaRS:SHMT2
EMBL:AK297173 IPI:IPI00794549 SMR:B4DLV4 STRING:B4DLV4
Ensembl:ENST00000393827 UCSC:uc001snj.2 Uniprot:B4DLV4
Length = 408
Score = 264 (98.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 54/117 (46%), Positives = 78/117 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 293 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 352
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGFEK 131
D V + +++KS+T KL+DF + + + +A VE++A+ FP GF++
Sbjct: 353 DEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 407
>UNIPROTKB|G4MRB4 [details] [associations]
symbol:MGG_13781 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:CM001231 GO:GO:0006544 GO:GO:0035999 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003710851.1
ProteinModelPortal:G4MRB4 SMR:G4MRB4 EnsemblFungi:MGG_13781T0
GeneID:5049001 KEGG:mgr:MGG_13781 Uniprot:G4MRB4
Length = 516
Score = 266 (98.7 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 58/120 (48%), Positives = 78/120 (65%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
QGIDG+RVE+VLE V IAANKNTVPGD SA+ PGG+RMGTPA+T+RGF E+DF +VA
Sbjct: 390 QGIDGARVERVLELVGIAANKNTVPGDKSALTPGGLRMGTPAMTTRGFGEDDFVRVADIV 449
Query: 76 DAAVKLTVKI----------KSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
D AV + V++ K E KLK+F+ + +SEI + +V ++ +P
Sbjct: 450 DRAVTIAVRVDKAARKAAEAKGEKSPGKLKNFLEYLGNGETESEIVQLRSEVSDWVGTYP 509
>UNIPROTKB|P34897 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9606 "Homo sapiens" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005758 "mitochondrial intermembrane
space" evidence=IEA] [GO:0006564 "L-serine biosynthetic process"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008732 "L-allo-threonine aldolase
activity" evidence=IEA] [GO:0016597 "amino acid binding"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051289 "protein homotetramerization"
evidence=IEA] [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IDA]
[GO:0006730 "one-carbon metabolic process" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0015630 GO:GO:0005743 GO:GO:0005758 GO:GO:0008284
EMBL:CH471054 DrugBank:DB00114 GO:GO:0003682 GO:GO:0016597
GO:GO:0051289 GO:GO:0042645 DrugBank:DB00145 DrugBank:DB00116
GO:GO:0008168 GO:GO:0006730 GO:GO:0035999 GO:GO:0006564
GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
HOVERGEN:HBG002807 CTD:6472 EMBL:AK315916 EMBL:BT006866
EMBL:AC137834 EMBL:BC011911 EMBL:BC013677 EMBL:BC032584
EMBL:BC044211 EMBL:Y12331 EMBL:U23143 EMBL:L11932 IPI:IPI00002520
IPI:IPI00795816 PIR:B46746 RefSeq:NP_001159828.1
RefSeq:NP_001159829.1 RefSeq:NP_001159830.1 RefSeq:NP_001159831.1
RefSeq:NP_005403.2 UniGene:Hs.741179 PDB:3OU5 PDBsum:3OU5
ProteinModelPortal:P34897 SMR:P34897 IntAct:P34897 STRING:P34897
PhosphoSite:P34897 DMDM:6226865 PaxDb:P34897 PRIDE:P34897
DNASU:6472 Ensembl:ENST00000328923 Ensembl:ENST00000414700
Ensembl:ENST00000449049 Ensembl:ENST00000553474
Ensembl:ENST00000557487 GeneID:6472 KEGG:hsa:6472 UCSC:uc001snf.2
GeneCards:GC12P057623 HGNC:HGNC:10852 HPA:HPA020543 HPA:HPA020549
MIM:138450 neXtProt:NX_P34897 PharmGKB:PA35755 InParanoid:P34897
PhylomeDB:P34897 BioCyc:MetaCyc:HS00049-MONOMER ChiTaRS:SHMT2
EvolutionaryTrace:P34897 GenomeRNAi:6472 NextBio:25141
ArrayExpress:P34897 Bgee:P34897 CleanEx:HS_SHMT2
Genevestigator:P34897 GermOnline:ENSG00000182199 Uniprot:P34897
Length = 504
Score = 264 (98.0 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 54/117 (46%), Positives = 78/117 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 389 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 448
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGFEK 131
D V + +++KS+T KL+DF + + + +A VE++A+ FP GF++
Sbjct: 449 DEGVNIGLEVKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 503
>CGD|CAL0003822 [details] [associations]
symbol:SHM1 species:5476 "Candida albicans" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006544 "glycine metabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IEA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 261 (96.9 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 52/114 (45%), Positives = 78/114 (68%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+R+GTPA+T+RGF E+F KVA F
Sbjct: 378 RNIDGARVEAVLERANIATNKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFI 437
Query: 76 DAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH-DVEEYAKQFPTIG 128
D AV + +++K++ QG K+ +A+ + +S+ K+ +V + ++P G
Sbjct: 438 DQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
>UNIPROTKB|Q59PP7 [details] [associations]
symbol:SHM1 "Putative uncharacterized protein SHM1"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006544 "glycine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0003822
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
EMBL:AACQ01000187 RefSeq:XP_711682.1 RefSeq:XP_888942.1
ProteinModelPortal:Q59PP7 SMR:Q59PP7 STRING:Q59PP7 GeneID:3646724
GeneID:3703901 KEGG:cal:CaO19.1342 KEGG:cal:CaO19_1342
Uniprot:Q59PP7
Length = 493
Score = 261 (96.9 bits), Expect = 6.8e-22, P = 6.8e-22
Identities = 52/114 (45%), Positives = 78/114 (68%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+ IDG+RVE VLE +IA NKNTVPGDVSA+ P G+R+GTPA+T+RGF E+F KVA F
Sbjct: 378 RNIDGARVEAVLERANIATNKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFI 437
Query: 76 DAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH-DVEEYAKQFPTIG 128
D AV + +++K++ QG K+ +A+ + +S+ K+ +V + ++P G
Sbjct: 438 DQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
>MGI|MGI:98299 [details] [associations]
symbol:Shmt1 "serine hydroxymethyltransferase 1 (soluble)"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006544 "glycine metabolic process" evidence=ISO]
[GO:0006545 "glycine biosynthetic process" evidence=ISO]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0006565
"L-serine catabolic process" evidence=ISO] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0008732 "L-allo-threonine
aldolase activity" evidence=ISO] [GO:0009113 "purine nucleobase
biosynthetic process" evidence=ISO] [GO:0016597 "amino acid
binding" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0019264 "glycine biosynthetic process from
serine" evidence=ISO] [GO:0030170 "pyridoxal phosphate binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046655 "folic acid metabolic process" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051289
"protein homotetramerization" evidence=ISO] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
MGI:MGI:98299 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016597 GO:GO:0051289
GO:GO:0009113 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565
EMBL:AL596215 GO:GO:0008732 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 GO:GO:0019264 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 OrthoDB:EOG42Z4Q2
ChiTaRS:SHMT1 EMBL:AF237702 EMBL:BC026055 EMBL:X94478 EMBL:X94479
IPI:IPI00118059 PIR:JC4959 RefSeq:NP_033197.2 UniGene:Mm.364956
PDB:1EJI PDBsum:1EJI ProteinModelPortal:P50431 SMR:P50431
STRING:P50431 PhosphoSite:P50431 REPRODUCTION-2DPAGE:P50431
SWISS-2DPAGE:P50431 PaxDb:P50431 PRIDE:P50431
Ensembl:ENSMUST00000018744 GeneID:20425 KEGG:mmu:20425
InParanoid:Q8R0X9 OMA:KEALEPW ChEMBL:CHEMBL4396
EvolutionaryTrace:P50431 NextBio:298438 Bgee:P50431
CleanEx:MM_SHMT1 Genevestigator:P50431
GermOnline:ENSMUSG00000020534 Uniprot:P50431
Length = 478
Score = 260 (96.6 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 58/116 (50%), Positives = 74/116 (63%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F
Sbjct: 360 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFI 419
Query: 76 DAAVKLTVKIKSE--TQGTKLKDFVATTQS-ANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S T+ T LK+F QS +A +VE +A F G
Sbjct: 420 HRGIELTLQIQSHMATKAT-LKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPG 474
>RGD|1308582 [details] [associations]
symbol:Shmt2 "serine hydroxymethyltransferase 2 (mitochondrial)"
species:10116 "Rattus norvegicus" [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=ISO;IDA;TAS] [GO:0005739 "mitochondrion"
evidence=ISO;IDA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO;IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISO;IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA;TAS]
[GO:0006545 "glycine biosynthetic process" evidence=IDA]
[GO:0006563 "L-serine metabolic process" evidence=TAS] [GO:0006564
"L-serine biosynthetic process" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=ISO] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IDA] [GO:0008732
"L-allo-threonine aldolase activity" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IEA;ISO] [GO:0016597 "amino
acid binding" evidence=IPI] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IDA;TAS] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0051289 "protein homotetramerization"
evidence=IDA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 RGD:1308582
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0015630 GO:GO:0005743
GO:GO:0005758 GO:GO:0005759 GO:GO:0008284 GO:GO:0003682
GO:GO:0016597 GO:GO:0051289 GO:GO:0042802 GO:GO:0042645
GO:GO:0008168 GO:GO:0035999 GO:GO:0006564 GO:GO:0008732
eggNOG:COG0112 KO:K00600 GO:GO:0004372 PANTHER:PTHR11680
OMA:GKIDYED HOGENOM:HOG000239405 GO:GO:0019264
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 CTD:6472
OrthoDB:EOG4G4GQ7 EMBL:BC085331 IPI:IPI00195109
RefSeq:NP_001008323.1 UniGene:Rn.9214 SMR:Q5U3Z7 IntAct:Q5U3Z7
STRING:Q5U3Z7 Ensembl:ENSRNOT00000011082 GeneID:299857
KEGG:rno:299857 InParanoid:Q5U3Z7 NextBio:645904
Genevestigator:Q5U3Z7 Uniprot:Q5U3Z7
Length = 504
Score = 258 (95.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 389 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 448
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGFEK 131
D V + +++K +T KL+DF + + +A VE++A+ FP GF++
Sbjct: 449 DEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQRLANLRQQVEQFARGFPMPGFDE 503
>UNIPROTKB|Q5E9P9 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9913 "Bos taurus" [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] [GO:0046655 "folic acid metabolic
process" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0006565 "L-serine catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 eggNOG:COG0112 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 HOGENOM:HOG000239405 EMBL:BT020871 EMBL:BC112563
IPI:IPI00695792 RefSeq:NP_001015553.1 UniGene:Bt.88340
ProteinModelPortal:Q5E9P9 SMR:Q5E9P9 STRING:Q5E9P9 PRIDE:Q5E9P9
Ensembl:ENSBTAT00000022732 GeneID:509002 KEGG:bta:509002 CTD:6470
GeneTree:ENSGT00390000002762 HOVERGEN:HBG002807 InParanoid:Q5E9P9
OrthoDB:EOG42Z4Q2 NextBio:20868773 Uniprot:Q5E9P9
Length = 484
Score = 256 (95.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 57/116 (49%), Positives = 74/116 (63%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F
Sbjct: 366 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFI 425
Query: 76 DAAVKLTVKIKSETQGTK--LKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+ + G K LK+F+ A +A +VE +A FP G
Sbjct: 426 HRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
>POMBASE|SPAC18G6.04c [details] [associations]
symbol:shm2 "serine hydroxymethyltransferase Shm2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IC] [GO:0009070 "serine family amino acid biosynthetic
process" evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC18G6.04c
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 PIR:T37918 RefSeq:NP_593668.2 STRING:Q10104
EnsemblFungi:SPAC18G6.04c.1 GeneID:2542242 OrthoDB:EOG4V1B88
NextBio:20803308 GO:GO:0009070 Uniprot:Q10104
Length = 488
Score = 256 (95.2 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 55/112 (49%), Positives = 76/112 (67%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+RVE++LE V+I+ANKNTVPGD SA++P G+R+GTPA T+RGF E+DF +V
Sbjct: 373 KGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELI 432
Query: 76 DAAVKLTVKIKSET--QG-TKLKDFVATTQSANFQSEIAKRCHDVEEYAKQF 124
D V LT KI +G +K +DF A + SEIAK +V +A +F
Sbjct: 433 DEVVSLTKKINEAALKEGKSKFRDFKAYVGDGSKFSEIAKLKKEVITWAGKF 484
>TAIR|locus:2127806 [details] [associations]
symbol:SHM3 "serine hydroxymethyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006544 "glycine
metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0009570
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP002687 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 OMA:SKELTGW IPI:IPI00529123 RefSeq:NP_001119098.1
RefSeq:NP_567895.1 UniGene:At.27717 ProteinModelPortal:F4JUC7
SMR:F4JUC7 PRIDE:F4JUC7 EnsemblPlants:AT4G32520.1
EnsemblPlants:AT4G32520.2 GeneID:829387 KEGG:ath:AT4G32520
Uniprot:F4JUC7
Length = 529
Score = 252 (93.8 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 53/114 (46%), Positives = 73/114 (64%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+DG+RVEK+L+ I NKN+VPGD SA+VPGGIR+G+PA+T+RG E+DF VA F
Sbjct: 415 GMDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIK 474
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSANFQ-SEIAKRCHD-VEEYAKQFPTIG 128
V++T++ K G+KL+DF S F E K + VE + +FP G
Sbjct: 475 EGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528
>ZFIN|ZDB-GENE-071213-1 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2
(mitochondrial)" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA;IDA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 ZFIN:ZDB-GENE-071213-1 GO:GO:0005739
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
HOVERGEN:HBG002807 CTD:6472 EMBL:CABZ01098501 EMBL:CABZ01112226
EMBL:CABZ01112227 EMBL:CABZ01112228 EMBL:CABZ01112229
EMBL:CABZ01112230 EMBL:EF213101 IPI:IPI00862356
RefSeq:NP_001116846.1 UniGene:Dr.128606 SMR:A9LDD9 STRING:A9LDD9
Ensembl:ENSDART00000111064 GeneID:100144628 KEGG:dre:100144628
NextBio:20791462 Uniprot:A9LDD9
Length = 492
Score = 251 (93.4 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 56/115 (48%), Positives = 72/115 (62%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
QG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+GTPALTSR E DF KV F
Sbjct: 377 QGMDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGTPALTSRQLKECDFQKVVEFI 436
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGF 129
+++ +K +T+ KL DF + + A S IA VE +A+ FP GF
Sbjct: 437 HQGIQIGQDVKKKTK--KLSDFKSFLLEDAETVSRIADLRSRVEAFARPFPMPGF 489
>POMBASE|SPAC24C9.12c [details] [associations]
symbol:SPAC24C9.12c "glycine hydroxymethyltransferase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006544 "glycine
metabolic process" evidence=ISS] [GO:0006563 "L-serine metabolic
process" evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 PomBase:SPAC24C9.12c
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CU329670 GO:GO:0006730
GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OrthoDB:EOG444PTT PIR:T38353 RefSeq:NP_594037.1
ProteinModelPortal:O13972 SMR:O13972 STRING:O13972 PRIDE:O13972
EnsemblFungi:SPAC24C9.12c.1 GeneID:2542651 KEGG:spo:SPAC24C9.12c
OMA:HMVLVDV NextBio:20803700 Uniprot:O13972
Length = 467
Score = 250 (93.1 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 53/125 (42%), Positives = 74/125 (59%)
Query: 3 SWMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 62
S M+L+ K +G+DG+R E+VLE ++I NKNTVP D SA P GIR+GTPA+T+RG
Sbjct: 341 SHMVLVDVK---SKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRG 397
Query: 63 FVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKRCHDVEEY 120
F E+DF +V + D A+ ++ E KLKDF A E+ + +V E+
Sbjct: 398 FKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEW 457
Query: 121 AKQFP 125
A FP
Sbjct: 458 ASSFP 462
>UNIPROTKB|P14519 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase,
mitochondrial" species:9986 "Oryctolagus cuniculus" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0005743 GO:GO:0003682 GO:GO:0042645 GO:GO:0006544
GO:GO:0035999 eggNOG:COG0112 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HOVERGEN:HBG002807 CTD:6472
EMBL:X91902 RefSeq:NP_001075874.1 UniGene:Ocu.3292
ProteinModelPortal:P14519 SMR:P14519 STRING:P14519 PRIDE:P14519
GeneID:100009293 Uniprot:P14519
Length = 504
Score = 250 (93.1 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 52/115 (45%), Positives = 74/115 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 389 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 448
Query: 76 DAAVKLTVKIKSETQGTKLKDFVA-TTQSANFQSEIAKRCHDVEEYAKQFPTIGF 129
D V + +++K +T KL+DF + + +A V+++A+ FP GF
Sbjct: 449 DEGVNIGLEVKRKT--AKLQDFKSFLLKDPETSQHLADLRRRVQQFARAFPMPGF 501
>UNIPROTKB|E1BS67 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0046655
"folic acid metabolic process" evidence=IEA] [GO:0051262 "protein
tetramerization" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0005739 GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0051262 GO:GO:0009113 GO:GO:0006544 GO:GO:0035999
GO:GO:0046655 GO:GO:0006565 GO:GO:0004372 PANTHER:PTHR11680
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AADN02023704
IPI:IPI00573440 Ensembl:ENSGALT00000008093 Uniprot:E1BS67
Length = 486
Score = 249 (92.7 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 50/114 (43%), Positives = 70/114 (61%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R E+VLE IA NKNT PGDVSA+ P G+R GTPALTSRGF ++DF VA +
Sbjct: 369 RGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRTVARYI 428
Query: 76 DAAVKLTVKIKSETQG-TKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++++ + LK+F + +Q E+ +VE +A FP G
Sbjct: 429 HKGIELTLRVQKDMNPKATLKEFKEKLEEEKYQGELKALKEEVEAFAATFPLPG 482
>ZFIN|ZDB-GENE-040426-1558 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1
(soluble)" species:7955 "Danio rerio" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0006563 "L-serine metabolic process" evidence=IEA] [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=IEA;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
ZFIN:ZDB-GENE-040426-1558 GO:GO:0005829 GO:GO:0005634 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 GeneTree:ENSGT00390000002762
EMBL:BX649440 IPI:IPI00994921 Ensembl:ENSDART00000124883
Bgee:F1QY03 Uniprot:F1QY03
Length = 504
Score = 246 (91.7 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 55/114 (48%), Positives = 73/114 (64%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G DG R EKVLEA IA NKNT PGD SA+ P G+R+G+PALTSRG +EE F KVA F
Sbjct: 387 GTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGLLEEHFHKVAEFIH 446
Query: 77 AAVKLTVKI-KSETQGTKLKDFVAT-TQSANFQSEIAKRCHDVEEYAKQFPTIG 128
+ LT++I K+ LK+F Q+ +Q +I + +VE++A +FP G
Sbjct: 447 QGIVLTLEIQKNMNPKATLKEFKEELAQNEKYQLKIKEIRKEVEDFAGKFPMPG 500
>SGD|S000000467 [details] [associations]
symbol:SHM1 "Mitochondrial serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;IMP] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;IGI;IMP] [GO:0009070 "serine family amino acid
biosynthetic process" evidence=IGI] [GO:0016740 "transferase
activity" evidence=IEA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000000467
GO:GO:0005739 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:BK006936 EMBL:X70529
EMBL:Z36131 GO:GO:0006730 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 GeneTree:ENSGT00390000002762
OrthoDB:EOG4V1B88 GO:GO:0009070 EMBL:L22528 PIR:S29348
RefSeq:NP_009822.4 RefSeq:NP_009827.3 ProteinModelPortal:P37292
SMR:P37292 DIP:DIP-4952N IntAct:P37292 MINT:MINT-548725
STRING:P37292 PaxDb:P37292 PeptideAtlas:P37292 PRIDE:P37292
EnsemblFungi:YBR263W GeneID:852565 GeneID:852571 KEGG:sce:YBR263W
KEGG:sce:YBR268W CYGD:YBR263w OMA:GFNENDV
BioCyc:MetaCyc:YBR263W-MONOMER NextBio:971682 Genevestigator:P37292
GermOnline:YBR263W Uniprot:P37292
Length = 490
Score = 245 (91.3 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77
+DG+RVE +L A++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF E+F++VA + D+
Sbjct: 375 VDGARVETILSALNIAANKNTIPGDKSALFPSGLRIGTPAMTTRGFGREEFSQVAKYIDS 434
Query: 78 AVKLTVKIKSETQGTKLKDFVATTQS---ANFQSEIAKRCHDVEEYAKQFPTIG 128
AVKL +K+ TKL + N SE+A ++ ++ Q+P G
Sbjct: 435 AVKLAENLKTLEPTTKLDARSRLNEFKKLCNESSEVAALSGEISKWVGQYPVPG 488
>UNIPROTKB|E2RIV3 [details] [associations]
symbol:SHMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0051262 "protein tetramerization" evidence=IEA]
[GO:0046655 "folic acid metabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0006565 "L-serine catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005739
GO:GO:0005634 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0051262 GO:GO:0009113
GO:GO:0006544 GO:GO:0035999 GO:GO:0046655 GO:GO:0006565 KO:K00600
GO:GO:0004372 PANTHER:PTHR11680 CTD:6470
GeneTree:ENSGT00390000002762 OMA:VDLRESH EMBL:AAEX03003713
EMBL:AAEX03003714 RefSeq:XP_851819.2 Ensembl:ENSCAFT00000028996
GeneID:489536 KEGG:cfa:489536 Uniprot:E2RIV3
Length = 484
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 53/115 (46%), Positives = 70/115 (60%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E++F KVA F
Sbjct: 366 KGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKEFQKVAQFV 425
Query: 76 DAAVKLTVKIKSETQG-TKLKDF-VATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+++ LK+F Q I +VE +A FP G
Sbjct: 426 HRGIELTLQIQNDIGARATLKEFREKLAGDEKHQRAIRALREEVESFASLFPLPG 480
>CGD|CAL0001464 [details] [associations]
symbol:SHM2 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] [GO:0043332 "mating projection
tip" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
UniPathway:UPA00193 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 238 (88.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 54/126 (42%), Positives = 78/126 (61%)
Query: 3 SWMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 62
S M+L+ K + IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG
Sbjct: 348 SHMVLVSLK---DKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRG 404
Query: 63 FVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKRCHD-VEE 119
EEDF K+ + D AV +++S+ KLKDF + + SE K D + +
Sbjct: 405 LGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDF---KNAVSGDSEKLKAVRDEIYQ 461
Query: 120 YAKQFP 125
+A FP
Sbjct: 462 WAGSFP 467
>UNIPROTKB|O13426 [details] [associations]
symbol:SHM2 "Serine hydroxymethyltransferase, cytosolic"
species:237561 "Candida albicans SC5314" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006544 "glycine metabolic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 CGD:CAL0001464
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006730 EMBL:AACQ01000046
EMBL:AACQ01000047 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112
KO:K00600 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 EMBL:AF009966 RefSeq:XP_718020.1
RefSeq:XP_718086.1 ProteinModelPortal:O13426 SMR:O13426
STRING:O13426 COMPLUYEAST-2DPAGE:O13426 GeneID:3640306
GeneID:3640372 KEGG:cal:CaO19.13173 KEGG:cal:CaO19.5750
Uniprot:O13426
Length = 470
Score = 238 (88.8 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 54/126 (42%), Positives = 78/126 (61%)
Query: 3 SWMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 62
S M+L+ K + IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG
Sbjct: 348 SHMVLVSLK---DKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRG 404
Query: 63 FVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKRCHD-VEE 119
EEDF K+ + D AV +++S+ KLKDF + + SE K D + +
Sbjct: 405 LGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDF---KNAVSGDSEKLKAVRDEIYQ 461
Query: 120 YAKQFP 125
+A FP
Sbjct: 462 WAGSFP 467
>FB|FBgn0029823 [details] [associations]
symbol:CG3011 species:7227 "Drosophila melanogaster"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006564 "L-serine biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0048149 "behavioral response
to ethanol" evidence=IMP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0048149
GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 GeneTree:ENSGT00390000002762 HSSP:P07511
OMA:VDLRESH UniGene:Dm.11053 GeneID:31524 KEGG:dme:Dmel_CG3011
FlyBase:FBgn0029823 GenomeRNAi:31524 NextBio:774055 EMBL:BT011432
RefSeq:NP_572278.1 SMR:Q9W457 IntAct:Q9W457 MINT:MINT-313386
STRING:Q9W457 EnsemblMetazoa:FBtr0070827 UCSC:CG3011-RA
InParanoid:Q9W457 Uniprot:Q9W457
Length = 537
Score = 239 (89.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 48/115 (41%), Positives = 74/115 (64%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+ G++ E +LE V IA NKNTVPGD SAM P GIR+GTPALT+RG E+D +V F D
Sbjct: 421 GLTGAKAEYILEEVGIACNKNTVPGDKSAMNPSGIRLGTPALTTRGLAEQDIEQVVAFID 480
Query: 77 AAVKLTVKIKSETQGTKLKDFVAT-TQSANFQSEIAKRCHDVEEYAKQFPTIGFE 130
AA+K+ V+ K+ D+ T ++ ++++ + +V +++++FP G E
Sbjct: 481 AALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEIRKNVAQFSRKFPLPGLE 535
>ASPGD|ASPL0000040474 [details] [associations]
symbol:AN3058 species:162425 "Emericella nidulans"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;RCA] [GO:0006520 "cellular amino acid metabolic
process" evidence=RCA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006544 "glycine
metabolic process" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001306 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:FRRGVRS ProteinModelPortal:C8VIR5
EnsemblFungi:CADANIAT00010021 Uniprot:C8VIR5
Length = 471
Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 49/112 (43%), Positives = 70/112 (62%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+ +DG+RVE VLE ++IA NKN++PGD SA+ P GIR+G PA+TSRG EEDF ++A +
Sbjct: 358 KSLDGARVEAVLEQINIACNKNSIPGDKSALTPCGIRIGAPAMTSRGMGEEDFKRIARYI 417
Query: 76 DAAVKLTVKIKSE--TQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
D A+ + +++ T KLKDF A S EI ++ +A FP
Sbjct: 418 DQAINICKSVQAALPTDANKLKDFKAKVASGTVP-EINDLRKEIAAWASTFP 468
>ASPGD|ASPL0000008876 [details] [associations]
symbol:AN10745 species:162425 "Emericella nidulans"
[GO:0006544 "glycine metabolic process" evidence=IEA] [GO:0006563
"L-serine metabolic process" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 EMBL:BN001301 GO:GO:0008168 GO:GO:0006544
GO:GO:0035999 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 OMA:LELTHQF ProteinModelPortal:C8V028
EnsemblFungi:CADANIAT00007210 Uniprot:C8V028
Length = 600
Score = 237 (88.5 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 57/127 (44%), Positives = 82/127 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+RVE+VLE +A+NKNTVPGD SA+ PGG+R+GTPA+T+RGF EDF +VA
Sbjct: 475 RGVDGARVERVLELCGVASNKNTVPGDRSALKPGGLRLGTPAMTTRGFQPEDFRRVADIV 534
Query: 76 DAAVKLTVKI-KSE-----TQGTK----LKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
D AV +T K+ KS ++G K +K F+ + SEI + +VE++A F
Sbjct: 535 DRAVTITQKLDKSAKESAASKGVKNPNTVKAFLEYVGNGEEISEIVQLRQEVEDWAGTF- 593
Query: 126 TIGFEKE 132
+ + KE
Sbjct: 594 NLPWAKE 600
>DICTYBASE|DDB_G0291652 [details] [associations]
symbol:shmt2 "serine hydroxymethyltransferase 2"
species:44689 "Dictyostelium discoideum" [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0006563 "L-serine metabolic
process" evidence=IEA] [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA;ISS] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA;ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0291652 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005759
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 OMA:DYLIDMD
HSSP:P34897 ProtClustDB:PTZ00094 RefSeq:XP_635129.1
ProteinModelPortal:Q54EW1 SMR:Q54EW1 STRING:Q54EW1 PRIDE:Q54EW1
EnsemblProtists:DDB0230073 GeneID:8628075 KEGG:ddi:DDB_G0291652
Uniprot:Q54EW1
Length = 481
Score = 232 (86.7 bits), Expect = 9.6e-19, P = 9.6e-19
Identities = 49/110 (44%), Positives = 71/110 (64%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
QGI GS++EK + HI NKN V GD +A+ PGG+R+G PALTSRG E+DF KV F
Sbjct: 371 QGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFL 430
Query: 76 DAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCH-DVEEYAKQF 124
D VK+++ I+S+ G K+ DF Q A ++ K+ +V+E++ +F
Sbjct: 431 DRVVKISLDIQSKV-GKKMPDF----QRAIADNQDLKQIRQEVKEFSTKF 475
>UNIPROTKB|G4NDG3 [details] [associations]
symbol:MGG_00923 "Serine hydroxymethyltransferase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CM001235 GO:GO:0008168
GO:GO:0043581 GO:GO:0006544 GO:GO:0035999 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 RefSeq:XP_003718036.1
ProteinModelPortal:G4NDG3 SMR:G4NDG3 EnsemblFungi:MGG_00923T0
GeneID:2674480 KEGG:mgr:MGG_00923 Uniprot:G4NDG3
Length = 482
Score = 231 (86.4 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 48/110 (43%), Positives = 71/110 (64%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77
+DG+RVE VLE ++IA NKN++PGD SA+ P GIR+GTPA+TSRGF E F +VA + D
Sbjct: 362 LDGARVEAVLEQINIACNKNSIPGDKSALTPCGIRIGTPAMTSRGFGVEHFQRVAKYIDE 421
Query: 78 AVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
++K+ +++ + KLKDF A S S I + ++ + + FP
Sbjct: 422 SIKICKDVQAALPKEANKLKDFKAKVASGEV-SRINELKKEIASWCQTFP 470
>UNIPROTKB|H0YIZ0 [details] [associations]
symbol:SHMT2 "Serine hydroxymethyltransferase" species:9606
"Homo sapiens" [GO:0006544 "glycine metabolic process"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0004372 "glycine hydroxymethyltransferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] UniPathway:UPA00193
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 EMBL:AC137834 HGNC:HGNC:10852
ChiTaRS:SHMT2 Ensembl:ENST00000557529 Uniprot:H0YIZ0
Length = 264
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 189 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 248
Query: 76 DAAVKLTVKIKSET 89
D V + +++KS+T
Sbjct: 249 DEGVNIGLEVKSKT 262
>UNIPROTKB|E2R4L7 [details] [associations]
symbol:SHMT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035999 "tetrahydrofolate interconversion"
evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 OMA:GKIDYED
GeneTree:ENSGT00390000002762 EMBL:AAEX03006944 EMBL:AAEX03006943
Ensembl:ENSCAFT00000000313 NextBio:20893182 Uniprot:E2R4L7
Length = 531
Score = 230 (86.0 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
+G+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F
Sbjct: 434 KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFI 493
Query: 76 DAAVKLTVKIKSETQGTKLKDF 97
D V + +++K++T KL+DF
Sbjct: 494 DEGVHIGLEVKNKT--AKLQDF 513
>TAIR|locus:2129251 [details] [associations]
symbol:SHM4 "serine hydroxymethyltransferase 4"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=ISS;IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005829 GO:GO:0005886
GO:GO:0009506 GO:GO:0046686 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97335 GO:GO:0008168
GO:GO:0006544 GO:GO:0035999 EMBL:AL161537 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:LKEVASP HSSP:P07511 ProtClustDB:PLN03226 EMBL:AF361589
EMBL:AY093987 IPI:IPI00532971 PIR:B71400 RefSeq:NP_193129.1
UniGene:At.23373 ProteinModelPortal:O23254 SMR:O23254 STRING:O23254
PaxDb:O23254 PRIDE:O23254 ProMEX:O23254 EnsemblPlants:AT4G13930.1
GeneID:827027 KEGG:ath:AT4G13930 TAIR:At4g13930 InParanoid:O23254
PhylomeDB:O23254 Genevestigator:O23254 Uniprot:O23254
Length = 471
Score = 228 (85.3 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 50/121 (41%), Positives = 73/121 (60%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+ G++VEK+ + I NKN V GD SA+ PGG+R+G PA+TSRG VE+DF ++ F
Sbjct: 354 GLTGNKVEKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLS 413
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIGFEKETMKY 136
AV LT+ I+ +T G LKDF + ++ + DVE+++ + GF MKY
Sbjct: 414 RAVTLTLDIQ-KTYGKLLKDF---NKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKY 469
Query: 137 K 137
K
Sbjct: 470 K 470
>SGD|S000004048 [details] [associations]
symbol:SHM2 "Cytosolic serine hydroxymethyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IMP;IDA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0006730 "one-carbon metabolic
process" evidence=IEA;IGI;IMP] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0043332 "mating projection
tip" evidence=IDA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 SGD:S000004048
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0043332 EMBL:BK006945 GO:GO:0006730 GO:GO:0006544
GO:GO:0035999 EMBL:X94607 eggNOG:COG0112 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
GeneTree:ENSGT00390000002762 EMBL:L22529 EMBL:Z73230 PIR:S61632
RefSeq:NP_013159.1 ProteinModelPortal:P37291 SMR:P37291
DIP:DIP-2602N IntAct:P37291 MINT:MINT-423439 STRING:P37291
PaxDb:P37291 PeptideAtlas:P37291 PRIDE:P37291 EnsemblFungi:YLR058C
GeneID:850747 KEGG:sce:YLR058C CYGD:YLR058c OMA:FRRGVRS
OrthoDB:EOG444PTT BioCyc:MetaCyc:YLR058C-MONOMER NextBio:966873
Genevestigator:P37291 GermOnline:YLR058C Uniprot:P37291
Length = 469
Score = 225 (84.3 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 45/125 (36%), Positives = 79/125 (63%)
Query: 3 SWMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRG 62
S M+L+ + ++G+DG+RVE + E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG
Sbjct: 347 SHMVLVSLR---EKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRG 403
Query: 63 FVEEDFAKVAYFFDAAVKLTVKIKSET--QGTKLKDFVATTQSANFQSEIAKRCHDVEEY 120
EEDF ++ + + AV+ +++ +LKDF A + K+ ++ ++
Sbjct: 404 MGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWKK--EIYDW 461
Query: 121 AKQFP 125
A ++P
Sbjct: 462 AGEYP 466
>TAIR|locus:2119545 [details] [associations]
symbol:EDA36 "EMBRYO SAC DEVELOPMENT ARREST 37"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0010197 "polar nucleus fusion" evidence=IMP]
[GO:0009555 "pollen development" evidence=IMP] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009555 GO:GO:0008168
GO:GO:0006544 GO:GO:0010197 GO:GO:0035999 EMBL:AL035528
EMBL:AL161537 eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN03226 IPI:IPI00536506 PIR:T05258 RefSeq:NP_193125.1
UniGene:At.33326 ProteinModelPortal:Q9SVM4 SMR:Q9SVM4 STRING:Q9SVM4
EnsemblPlants:AT4G13890.1 GeneID:827024 KEGG:ath:AT4G13890
TAIR:At4g13890 InParanoid:Q9SVM4 OMA:MAHNSAL PhylomeDB:Q9SVM4
ArrayExpress:Q9SVM4 Genevestigator:Q9SVM4 Uniprot:Q9SVM4
Length = 470
Score = 224 (83.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 50/113 (44%), Positives = 68/113 (60%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+ G++VEKV E +I N+N V GD S + PGG+R+GTPA+TSRG VE+DF K+ F
Sbjct: 354 GLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLH 413
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIGF 129
AV +T+ I+ E G +KDF + EI + DVEE+ F GF
Sbjct: 414 RAVTITLDIQ-EQYGKVMKDF---NKGLVNNKEIDEIKADVEEFTYDFDMPGF 462
>DICTYBASE|DDB_G0277947 [details] [associations]
symbol:shmt1 "serine hydroxymethyltransferase 1"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0006563 "L-serine metabolic process"
evidence=IEA] [GO:0006544 "glycine metabolic process" evidence=IEA]
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;ISS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] UniPathway:UPA00193 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
dictyBase:DDB_G0277947 GO:GO:0005829 GO:GO:0045335 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0006730 GO:GO:0006544 GO:GO:0035999 eggNOG:COG0112 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HSSP:P34897
RefSeq:XP_642026.1 ProteinModelPortal:Q54Z26 SMR:Q54Z26
STRING:Q54Z26 EnsemblProtists:DDB0230072 GeneID:8621237
KEGG:ddi:DDB_G0277947 OMA:LKEVASP ProtClustDB:PTZ00094
Uniprot:Q54Z26
Length = 457
Score = 203 (76.5 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/111 (40%), Positives = 65/111 (58%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77
+ G++ EK + +I NKN V GD +A+ PGGIR+G+ ALTSRG E DF K+A F D
Sbjct: 350 LTGNKFEKAADIANITVNKNAVHGDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDR 409
Query: 78 AVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
V ++++I+ G KL DFV N E+ +VEE++ +F G
Sbjct: 410 IVSISLEIQGRV-GKKLVDFVV---EINKSKELLDLRKEVEEFSSKFTLPG 456
>TAIR|locus:2035937 [details] [associations]
symbol:SHM7 "serine hydroxymethyltransferase 7"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006544 "glycine metabolic process"
evidence=IEA;ISS] [GO:0006563 "L-serine metabolic process"
evidence=IEA;ISS] [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046686 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0008168 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 OMA:IAKLQWA HSSP:P07511
EMBL:BT002738 IPI:IPI00548548 RefSeq:NP_564473.1 UniGene:At.23145
ProteinModelPortal:Q84WV0 STRING:Q84WV0 PaxDb:Q84WV0 PRIDE:Q84WV0
EnsemblPlants:AT1G36370.1 GeneID:840543 KEGG:ath:AT1G36370
TAIR:At1g36370 InParanoid:Q84WV0 PhylomeDB:Q84WV0
ProtClustDB:PLN02271 ArrayExpress:Q84WV0 Genevestigator:Q84WV0
Uniprot:Q84WV0
Length = 598
Score = 181 (68.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 42/108 (38%), Positives = 62/108 (57%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+ G EKV E HI NK + GD + PGG+R+GTPA+T+RG +E DF +A F
Sbjct: 485 GLTGKVYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLI 544
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQF 124
A ++T ++ E G K+FV +S +IA+ + VE +A Q+
Sbjct: 545 KAAQITSALQRE-HGKSHKEFV---KSLCTNKDIAELRNRVEAFALQY 588
>GENEDB_PFALCIPARUM|PFL1720w [details] [associations]
symbol:PFL1720w "Serine
hydroxymethyltransferase" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006730
"one-carbon metabolic process" evidence=TAS] HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00464 PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 178 (67.7 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 42/108 (38%), Positives = 64/108 (59%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77
I GS++++ A++IA NKNT+P DV + P GIR+GTPALT+RG E+D +A
Sbjct: 337 ITGSKLQETCNAINIALNKNTIPSDVDCVSPSGIRIGTPALTTRGCKEKDMEFIADMLLK 396
Query: 78 AVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
A+ LT +++ + G KL DF + E+ K +V ++AK P
Sbjct: 397 AILLTDELQQK-YGKKLVDFKKGLVNNPKIDELKK---EVVQWAKNLP 440
>UNIPROTKB|Q8I566 [details] [associations]
symbol:PFL1720w "Serine hydroxymethyltransferase"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006730 "one-carbon metabolic
process" evidence=TAS] HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00464
PIRSF:PIRSF000412 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE014188 GO:GO:0008168 GO:GO:0006730 GO:GO:0006544 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 HOGENOM:HOG000239405
OMA:IAKLQWA ProtClustDB:PTZ00094 HSSP:P07511 RefSeq:XP_001350750.1
ProteinModelPortal:Q8I566 EnsemblProtists:PFL1720w:mRNA
GeneID:811396 KEGG:pfa:PFL1720w EuPathDB:PlasmoDB:PF3D7_1235600
Uniprot:Q8I566
Length = 442
Score = 178 (67.7 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 42/108 (38%), Positives = 64/108 (59%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77
I GS++++ A++IA NKNT+P DV + P GIR+GTPALT+RG E+D +A
Sbjct: 337 ITGSKLQETCNAINIALNKNTIPSDVDCVSPSGIRIGTPALTTRGCKEKDMEFIADMLLK 396
Query: 78 AVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFP 125
A+ LT +++ + G KL DF + E+ K +V ++AK P
Sbjct: 397 AILLTDELQQK-YGKKLVDFKKGLVNNPKIDELKK---EVVQWAKNLP 440
>TAIR|locus:2030581 [details] [associations]
symbol:SHM6 "serine hydroxymethyltransferase 6"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA;ISS] [GO:0006544
"glycine metabolic process" evidence=IEA;ISS] [GO:0006563 "L-serine
metabolic process" evidence=IEA;ISS] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PROSITE:PS00096 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0008168 EMBL:AC069252 GO:GO:0006544 GO:GO:0035999
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 HOGENOM:HOG000239405 HSSP:P07511
ProtClustDB:PLN02271 EMBL:AY125514 EMBL:BT004532 IPI:IPI00534805
RefSeq:NP_173621.1 UniGene:At.41627 ProteinModelPortal:Q9LM59
SMR:Q9LM59 STRING:Q9LM59 PaxDb:Q9LM59 PRIDE:Q9LM59
EnsemblPlants:AT1G22020.1 GeneID:838807 KEGG:ath:AT1G22020
TAIR:At1g22020 InParanoid:Q9LM59 OMA:IFGAIGK PhylomeDB:Q9LM59
Genevestigator:Q9LM59 Uniprot:Q9LM59
Length = 599
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
G+ G EKV E HI NK + + + PGG+R+G+PA+TSRG +E +F +A F
Sbjct: 489 GLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLY 548
Query: 77 AAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIGFE 130
A ++ + E G K+ +S EIA + VE +A QF F+
Sbjct: 549 RAAQIASAAQRE-HGKLQKE---PLKSIYHCKEIADLRNQVEAFATQFAMPAFD 598
>UNIPROTKB|O53441 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006544 "glycine metabolic process" evidence=IDA] [GO:0006563
"L-serine metabolic process" evidence=IDA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IDA] [GO:0042783 "active evasion of
host immune response" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005886
GO:GO:0005737 GO:GO:0005618 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:BX842575 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006544 GO:GO:0035999 GO:GO:0042783
GO:GO:0006545 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680 PIR:C70896
RefSeq:NP_335569.1 RefSeq:YP_006514462.1 PDB:1LXB PDB:3H7F
PDBsum:1LXB PDBsum:3H7F ProteinModelPortal:O53441 SMR:O53441
PRIDE:O53441 EnsemblBacteria:EBMYCT00000001613
EnsemblBacteria:EBMYCT00000071670 GeneID:13319665 GeneID:924979
KEGG:mtc:MT1125 KEGG:mtu:Rv1093 KEGG:mtv:RVBD_1093 PATRIC:18124236
TubercuList:Rv1093 OMA:PETHRID ProtClustDB:PRK00011 BRENDA:2.1.2.1
EvolutionaryTrace:O53441 Uniprot:O53441
Length = 426
Score = 126 (49.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVA 72
+DG E +L V I N+N VP D MV G+R+GTPAL +RGF + +F +VA
Sbjct: 328 LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVA 383
Score = 39 (18.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 88 ETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI-GFEK 131
+T+ T++ D +AT + +++ A+ FP G E+
Sbjct: 376 DTEFTEVADIIATALATGSSVDVSALKDRATRLARAFPLYDGLEE 420
>TIGR_CMR|CBU_1419 [details] [associations]
symbol:CBU_1419 "serine hydroxymethyltransferase"
species:227377 "Coxiella burnetii RSA 493" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:NP_820403.1 ProteinModelPortal:Q83BT3 SMR:Q83BT3
PRIDE:Q83BT3 GeneID:1209325 KEGG:cbu:CBU_1419 PATRIC:17931591
OMA:SKELTGW BioCyc:CBUR227377:GJ7S-1406-MONOMER Uniprot:Q83BT3
Length = 419
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEE 66
LF + I G E L +I NKNTVPG+ S V G+R+GTPA+T+RGF E+
Sbjct: 317 LFLVSLLDKNISGKEAEAALGRANITVNKNTVPGETRSPFVTSGLRIGTPAITTRGFKEK 376
Query: 67 DFAKVAYF 74
+ +++A++
Sbjct: 377 EASQLAHW 384
>UNIPROTKB|O53615 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:1773 "Mycobacterium tuberculosis" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006544 "glycine metabolic
process" evidence=IDA] [GO:0006563 "L-serine metabolic process"
evidence=IDA] [GO:0030170 "pyridoxal phosphate binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IPI] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005886 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842572 GO:GO:0006544 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011 BRENDA:2.1.2.1
PIR:G70848 RefSeq:NP_214584.1 RefSeq:NP_334486.1
RefSeq:YP_006513385.1 ProteinModelPortal:O53615 SMR:O53615
PRIDE:O53615 EnsemblBacteria:EBMYCT00000002193
EnsemblBacteria:EBMYCT00000071276 GeneID:13316049 GeneID:886983
GeneID:922815 KEGG:mtc:MT0076 KEGG:mtu:Rv0070c KEGG:mtv:RVBD_0070c
PATRIC:18121891 TubercuList:Rv0070c OMA:DYLIDMD Uniprot:O53615
Length = 425
Score = 133 (51.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 30/66 (45%), Positives = 38/66 (57%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
+DG + E L AV I N+N VP D M+ G+R+GTPAL +RGF DF VA
Sbjct: 332 LDGQQAEDRLAAVDITVNRNAVPFDPRPPMITSGLRIGTPALAARGFSHNDFRAVADLIA 391
Query: 77 AAVKLT 82
AA+ T
Sbjct: 392 AALTAT 397
>TIGR_CMR|SPO_1572 [details] [associations]
symbol:SPO_1572 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 130 (50.8 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVA 72
+G+ G+ EK L HI NKN VP D V GIR+G+PA T+RGF E +F ++A
Sbjct: 332 KGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIA 389
>TIGR_CMR|SPO_2940 [details] [associations]
symbol:SPO_2940 "serine hydroxymethyltransferase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_166813.1 RefSeq:YP_168148.1 ProteinModelPortal:Q5LPA8
SMR:Q5LPA8 GeneID:3193885 GeneID:3194742 KEGG:sil:SPO1572
KEGG:sil:SPO2940 PATRIC:23376465 OMA:QIDFARM Uniprot:Q5LPA8
Length = 431
Score = 130 (50.8 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVA 72
+G+ G+ EK L HI NKN VP D V GIR+G+PA T+RGF E +F ++A
Sbjct: 332 KGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIA 389
>UNIPROTKB|Q9KMP4 [details] [associations]
symbol:glyA2 "Serine hydroxymethyltransferase 2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 130 (50.8 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDF 68
+G+ G++VE+ LE I NKN +P D M+ GIR+GTPA TSRGF E+F
Sbjct: 339 KGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLGTPAGTSRGFGREEF 392
>TIGR_CMR|VC_A0278 [details] [associations]
symbol:VC_A0278 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 PIR:A82480 RefSeq:NP_232675.1
ProteinModelPortal:Q9KMP4 SMR:Q9KMP4 DNASU:2612058 GeneID:2612058
KEGG:vch:VCA0278 PATRIC:20085121 OMA:MILTNHE ProtClustDB:PRK13034
Uniprot:Q9KMP4
Length = 435
Score = 130 (50.8 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDF 68
+G+ G++VE+ LE I NKN +P D M+ GIR+GTPA TSRGF E+F
Sbjct: 339 KGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLGTPAGTSRGFGREEF 392
>TIGR_CMR|CHY_2557 [details] [associations]
symbol:CHY_2557 "serine hydroxymethyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006544 "glycine metabolic process" evidence=ISS]
[GO:0006553 "lysine metabolic process" evidence=ISS] [GO:0006563
"L-serine metabolic process" evidence=ISS] [GO:0006566 "threonine
metabolic process" evidence=ISS] [GO:0006730 "one-carbon metabolic
process" evidence=ISS] [GO:0006760 "folic acid-containing compound
metabolic process" evidence=ISS] [GO:0015947 "methane metabolic
process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 RefSeq:YP_361350.1 ProteinModelPortal:Q3A934
SMR:Q3A934 STRING:Q3A934 GeneID:3728195 KEGG:chy:CHY_2557
PATRIC:21278163 HOGENOM:HOG000239403 OMA:GLLSDPM
BioCyc:CHYD246194:GJCN-2556-MONOMER Uniprot:Q3A934
Length = 421
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75
G+ G R E++L+ + + NKN +P D S V GIR+GTPA+T+RG E + A++A
Sbjct: 325 GLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGIRIGTPAVTTRGMKEGEMAEIAEII 384
Query: 76 DAAVK 80
+K
Sbjct: 385 ALVLK 389
>UNIPROTKB|Q9KTG1 [details] [associations]
symbol:glyA1 "Serine hydroxymethyltransferase 1"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=ISS] [GO:0006545 "glycine biosynthetic process"
evidence=ISS] [GO:0006730 "one-carbon metabolic process"
evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/66 (43%), Positives = 37/66 (56%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEE 66
LF + I G + L A +I NKN+VP D S V GIR+GTPA+T RGF E+
Sbjct: 317 LFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIRVGTPAITRRGFTEQ 376
Query: 67 DFAKVA 72
D +A
Sbjct: 377 DAKDLA 382
>TIGR_CMR|VC_0941 [details] [associations]
symbol:VC_0941 "serine hydroxymethyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006730 GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 PIR:H82258
RefSeq:NP_230588.2 ProteinModelPortal:Q9KTG1 SMR:Q9KTG1
PRIDE:Q9KTG1 DNASU:2614161 GeneID:2614161 KEGG:vch:VC0941
PATRIC:20080986 OMA:GKIDYED Uniprot:Q9KTG1
Length = 416
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/66 (43%), Positives = 37/66 (56%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEE 66
LF + I G + L A +I NKN+VP D S V GIR+GTPA+T RGF E+
Sbjct: 317 LFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSGIRVGTPAITRRGFTEQ 376
Query: 67 DFAKVA 72
D +A
Sbjct: 377 DAKDLA 382
>TIGR_CMR|CJE_0451 [details] [associations]
symbol:CJE_0451 "serine hydroxymethyltransferase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK13034 HOGENOM:HOG000239405
RefSeq:YP_178470.1 ProteinModelPortal:Q5HW65 SMR:Q5HW65
STRING:Q5HW65 PRIDE:Q5HW65 GeneID:3231213 KEGG:cjr:CJE0451
PATRIC:20042602 OMA:ALATWIC BioCyc:CJEJ195099:GJC0-456-MONOMER
Uniprot:Q5HW65
Length = 414
Score = 125 (49.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 13 FHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKV 71
F + G + L I ANKNTVPG++ S + G+R+GTPALT+RGF E++ V
Sbjct: 316 FLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIV 375
Query: 72 A-YFFD 76
+ Y D
Sbjct: 376 SNYIAD 381
>TIGR_CMR|CPS_2477 [details] [associations]
symbol:CPS_2477 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_269193.1 ProteinModelPortal:Q481S6 SMR:Q481S6
STRING:Q481S6 PRIDE:Q481S6 GeneID:3520009 KEGG:cps:CPS_2477
PATRIC:21468023 BioCyc:CPSY167879:GI48-2540-MONOMER Uniprot:Q481S6
Length = 417
Score = 122 (48.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGF-VE 65
LF +GI G + L +I NKN+VP D S V G+R+GTPA+TSRGF +E
Sbjct: 318 LFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLRIGTPAITSRGFGLE 377
Query: 66 EDFAKVAYFFD 76
E A + D
Sbjct: 378 EAAALTGWICD 388
>TIGR_CMR|CPS_4031 [details] [associations]
symbol:CPS_4031 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_270689.1 ProteinModelPortal:Q47WY2 SMR:Q47WY2
STRING:Q47WY2 GeneID:3519081 KEGG:cps:CPS_4031 PATRIC:21470941
OMA:VKINAQV BioCyc:CPSY167879:GI48-4044-MONOMER Uniprot:Q47WY2
Length = 417
Score = 122 (48.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGF-VE 65
LF +GI G + L +I NKN+VP D S V G+R+GTPA+TSRGF +E
Sbjct: 318 LFLLDLIDKGITGKDADAALGRANITVNKNSVPNDPQSPFVTSGLRIGTPAITSRGFGLE 377
Query: 66 EDFAKVAYFFD 76
E A + D
Sbjct: 378 EAAALTGWICD 388
>TIGR_CMR|BA_5558 [details] [associations]
symbol:BA_5558 "serine hydroxymethyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 RefSeq:NP_847716.1
RefSeq:YP_022227.1 RefSeq:YP_031404.1 ProteinModelPortal:Q81JY4
SMR:Q81JY4 PRIDE:Q81JY4 DNASU:1085246
EnsemblBacteria:EBBACT00000011325 EnsemblBacteria:EBBACT00000016380
EnsemblBacteria:EBBACT00000022066 GeneID:1085246 GeneID:2820074
GeneID:2851919 KEGG:ban:BA_5558 KEGG:bar:GBAA_5558 KEGG:bat:BAS5165
HOGENOM:HOG000239405 OMA:CREAHAK
BioCyc:BANT260799:GJAJ-5240-MONOMER
BioCyc:BANT261594:GJ7F-5419-MONOMER Uniprot:Q81JY4
Length = 413
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 72
I G E VL+ V I NKNT+P + S V G+R+GT A+TSRGF ED ++A
Sbjct: 322 ITGKVAEHVLDEVGITVNKNTIPFETASPFVTSGVRIGTAAVTSRGFGLEDMDEIA 377
>TIGR_CMR|CPS_3844 [details] [associations]
symbol:CPS_3844 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK13034
RefSeq:YP_270506.1 ProteinModelPortal:Q47XG4 SMR:Q47XG4
STRING:Q47XG4 GeneID:3518659 KEGG:cps:CPS_3844 PATRIC:21470595
OMA:LQSRDPV BioCyc:CPSY167879:GI48-3861-MONOMER Uniprot:Q47XG4
Length = 431
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDF 68
+G+ G+ E+ LE I NKN +P D MV GIR+GTPA TSRGF ++F
Sbjct: 335 KGLKGNTTEESLERAGITCNKNGIPFDSEKPMVTSGIRLGTPAGTSRGFGNDEF 388
>TIGR_CMR|CPS_0728 [details] [associations]
symbol:CPS_0728 "serine hydroxymethyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0035999 GO:GO:0006545
RefSeq:YP_267478.1 ProteinModelPortal:Q488N6 SMR:Q488N6
STRING:Q488N6 PRIDE:Q488N6 GeneID:3519747 KEGG:cps:CPS_0728
PATRIC:21464771 eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600
OMA:AICAKFP BioCyc:CPSY167879:GI48-815-MONOMER GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 Uniprot:Q488N6
Length = 419
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGF-VEEDFAKVAYFF 75
I G + L HI NKN+VP D S V G+R+GTPA+T RGF +EE A +
Sbjct: 329 ITGKDADAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITRRGFGIEETKALTGWIC 388
Query: 76 D 76
D
Sbjct: 389 D 389
>UNIPROTKB|P0A825 [details] [associations]
symbol:glyA species:83333 "Escherichia coli K-12"
[GO:0004372 "glycine hydroxymethyltransferase activity"
evidence=IEA;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0035999
"tetrahydrofolate interconversion" evidence=IEA] [GO:0006546
"glycine catabolic process" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0006565 "L-serine
catabolic process" evidence=IDA] [GO:0019264 "glycine biosynthetic
process from serine" evidence=IDA;IMP] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA;IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005829
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0035999 GO:GO:0006546 GO:GO:0006565
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
PANTHER:PTHR11680 ProtClustDB:PRK00011 OMA:GKIDYED EMBL:V00283
EMBL:J01620 PIR:A00559 RefSeq:NP_417046.1 RefSeq:YP_490779.1
PDB:1DFO PDB:1EQB PDB:3G8M PDBsum:1DFO PDBsum:1EQB PDBsum:3G8M
ProteinModelPortal:P0A825 SMR:P0A825 DIP:DIP-36205N IntAct:P0A825
MINT:MINT-7293373 SWISS-2DPAGE:P0A825 PaxDb:P0A825 PRIDE:P0A825
EnsemblBacteria:EBESCT00000003405 EnsemblBacteria:EBESCT00000017377
GeneID:12932320 GeneID:947022 KEGG:ecj:Y75_p2504 KEGG:eco:b2551
PATRIC:32120501 EchoBASE:EB0403 EcoGene:EG10408
BioCyc:EcoCyc:GLYOHMETRANS-MONOMER BioCyc:ECOL316407:JW2535-MONOMER
BioCyc:MetaCyc:GLYOHMETRANS-MONOMER EvolutionaryTrace:P0A825
Genevestigator:P0A825 GO:GO:0019264 Uniprot:P0A825
Length = 417
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEE 66
LF + + G + L +I NKN+VP D S V GIR+GTPA+T RGF E
Sbjct: 318 LFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEA 377
Query: 67 DFAKVA 72
+ ++A
Sbjct: 378 EAKELA 383
>TIGR_CMR|APH_0154 [details] [associations]
symbol:APH_0154 "serine hydroxymethyltransferase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006544
"glycine metabolic process" evidence=ISS] [GO:0006730 "one-carbon
metabolic process" evidence=ISS] UniPathway:UPA00193 HAMAP:MF_00051
InterPro:IPR001085 InterPro:IPR015421 InterPro:IPR015422
InterPro:IPR019798 Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096
UniPathway:UPA00288 GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_504778.1 HSSP:P34897 ProteinModelPortal:Q2GLH3 SMR:Q2GLH3
STRING:Q2GLH3 GeneID:3930419 KEGG:aph:APH_0154 PATRIC:20948876
OMA:FKAYAHQ BioCyc:APHA212042:GHPM-189-MONOMER Uniprot:Q2GLH3
Length = 425
Score = 111 (44.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/57 (45%), Positives = 31/57 (54%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKV 71
+G+ G V LE I NKN VP D V GIR+G A TSRG V +DF K+
Sbjct: 327 KGLTGRDVSSSLERAGIVCNKNAVPFDTEKPWVTSGIRLGAAAETSRGLVVKDFEKI 383
>TIGR_CMR|SO_3471 [details] [associations]
symbol:SO_3471 "serine hydroxymethyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 OMA:AICAKFP GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239403
RefSeq:NP_719020.1 ProteinModelPortal:Q8EBN8 SMR:Q8EBN8
GeneID:1171147 KEGG:son:SO_3471 PATRIC:23526638 Uniprot:Q8EBN8
Length = 417
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEED 67
+ G + L + +I NKN+VP D S V G+R+GTPA+T RGF E +
Sbjct: 328 LTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGTPAITRRGFKEAE 378
>UNIPROTKB|A8MYA6 [details] [associations]
symbol:SHMT1 "Serine hydroxymethyltransferase, cytosolic"
species:9606 "Homo sapiens" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=IEA] [GO:0006544
"glycine metabolic process" evidence=IEA] [GO:0006563 "L-serine
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] [GO:0035999 "tetrahydrofolate
interconversion" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 GO:GO:0005634 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0006544 GO:GO:0035999
EMBL:AC127537 GO:GO:0004372 GO:GO:0006563 PANTHER:PTHR11680
HOGENOM:HOG000239405 HOVERGEN:HBG002807 HGNC:HGNC:10850
ChiTaRS:SHMT1 EMBL:AL353997 IPI:IPI00793862
ProteinModelPortal:A8MYA6 SMR:A8MYA6 STRING:A8MYA6
Ensembl:ENST00000395685 ArrayExpress:A8MYA6 Bgee:A8MYA6
Uniprot:A8MYA6
Length = 446
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 18/26 (69%), Positives = 19/26 (73%)
Query: 16 QGIDGSRVEKVLEAVHIAANKNTVPG 41
+G DG R EKVLEA IA NKNT PG
Sbjct: 366 KGTDGGRAEKVLEACSIACNKNTCPG 391
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 79 VKLTVKIKSETQGTK--LKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128
++LT++I+S+T G + LK+F +Q+ + +VE +A FP G
Sbjct: 392 IELTLQIQSDT-GVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 442
>TIGR_CMR|GSU_1607 [details] [associations]
symbol:GSU_1607 "serine hydroxymethyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004372 "glycine
hydroxymethyltransferase activity" evidence=ISS] [GO:0006545
"glycine biosynthetic process" evidence=ISS] [GO:0006730
"one-carbon metabolic process" evidence=ISS] UniPathway:UPA00193
HAMAP:MF_00051 InterPro:IPR001085 InterPro:IPR015421
InterPro:IPR015422 InterPro:IPR019798 Pfam:PF00464
PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288 GO:GO:0005737
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 KO:K00600 GO:GO:0004372 GO:GO:0006563
PANTHER:PTHR11680 ProtClustDB:PRK00011 HOGENOM:HOG000239405
RefSeq:NP_952658.1 ProteinModelPortal:Q74CR5 SMR:Q74CR5
PRIDE:Q74CR5 GeneID:2685603 KEGG:gsu:GSU1607 PATRIC:22026061
OMA:IAKLQWA BioCyc:GSUL243231:GH27-1559-MONOMER Uniprot:Q74CR5
Length = 415
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 18 IDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76
+ G E+ L+ I NKNTVP + S V G R+GTPA T+ G E + A VA F
Sbjct: 322 LTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFRIGTPAATTHGLKEAEMADVAGFIA 381
Query: 77 AAV 79
A+
Sbjct: 382 EAL 384
>TIGR_CMR|DET_0436 [details] [associations]
symbol:DET_0436 "Serine hydroxymethyltransferase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004372
"glycine hydroxymethyltransferase activity" evidence=ISS]
[GO:0006545 "glycine biosynthetic process" evidence=ISS]
[GO:0006730 "one-carbon metabolic process" evidence=ISS]
UniPathway:UPA00193 HAMAP:MF_00051 InterPro:IPR001085
InterPro:IPR015421 InterPro:IPR015422 InterPro:IPR019798
Pfam:PF00464 PIRSF:PIRSF000412 PROSITE:PS00096 UniPathway:UPA00288
GO:GO:0005737 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0035999 GO:GO:0006545
eggNOG:COG0112 HOGENOM:HOG000239404 KO:K00600 GO:GO:0004372
GO:GO:0006563 PANTHER:PTHR11680 ProtClustDB:PRK00011
RefSeq:YP_181180.1 ProteinModelPortal:Q3Z9B9 SMR:Q3Z9B9
STRING:Q3Z9B9 PRIDE:Q3Z9B9 GeneID:3230231 KEGG:det:DET0436
PATRIC:21607941 OMA:ERFRAIC BioCyc:DETH243164:GJNF-436-MONOMER
Uniprot:Q3Z9B9
Length = 415
Score = 104 (41.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 17 GIDGSRVEKVLEAVHIAANKNTVP--GDVSAMVPGGIRMGTPALTSRGF 63
G++G + L I N+NTVP + +A VP GIR+G PA TSRGF
Sbjct: 321 GVNGYDAQLALRRAGIVINRNTVPFAENQTANVPAGIRLGCPAATSRGF 369
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 138 0.00091 102 3 11 22 0.41 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 579 (62 KB)
Total size of DFA: 126 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.85u 0.18s 13.03t Elapsed: 00:00:00
Total cpu time: 12.85u 0.18s 13.03t Elapsed: 00:00:00
Start: Thu May 9 15:21:02 2013 End: Thu May 9 15:21:02 2013