Query 032537
Match_columns 138
No_of_seqs 120 out of 1025
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 03:42:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 1.3E-37 4.4E-42 268.2 13.2 125 5-131 364-489 (490)
2 2a7v_A Serine hydroxymethyltra 99.9 2.5E-26 8.5E-31 197.8 13.6 124 5-130 364-488 (490)
3 1rv3_A Serine hydroxymethyltra 99.8 1.1E-19 3.8E-24 154.0 13.6 125 6-130 355-481 (483)
4 3h7f_A Serine hydroxymethyltra 99.7 3.8E-16 1.3E-20 130.2 11.3 107 5-134 336-444 (447)
5 3n0l_A Serine hydroxymethyltra 99.4 1.6E-12 5.3E-17 105.1 12.9 102 5-128 311-413 (417)
6 3gbx_A Serine hydroxymethyltra 99.3 1.9E-11 6.6E-16 98.5 12.2 102 5-128 318-420 (420)
7 3ecd_A Serine hydroxymethyltra 99.2 2.5E-10 8.5E-15 92.1 11.9 106 5-127 319-425 (425)
8 2dkj_A Serine hydroxymethyltra 98.2 9.8E-06 3.4E-10 64.8 10.9 97 5-127 310-407 (407)
9 2vi8_A Serine hydroxymethyltra 98.1 2.6E-05 9E-10 62.3 10.9 95 5-121 309-404 (405)
10 3get_A Histidinol-phosphate am 89.5 0.98 3.4E-05 35.0 6.8 57 8-79 308-364 (365)
11 1iug_A Putative aspartate amin 89.4 0.7 2.4E-05 35.4 5.8 65 6-80 282-346 (352)
12 3g0t_A Putative aminotransfera 89.3 1.1 3.7E-05 35.7 7.1 64 6-80 371-435 (437)
13 3ly1_A Putative histidinol-pho 88.8 1.7 5.8E-05 33.4 7.7 58 7-80 293-350 (354)
14 3nra_A Aspartate aminotransfer 88.3 1.2 4E-05 35.0 6.5 65 7-80 338-403 (407)
15 2bkw_A Alanine-glyoxylate amin 88.3 1.1 3.7E-05 34.7 6.3 68 5-80 315-382 (385)
16 3if2_A Aminotransferase; YP_26 87.4 2.4 8.2E-05 33.9 8.0 69 6-80 365-438 (444)
17 2c0r_A PSAT, phosphoserine ami 87.0 1 3.6E-05 34.9 5.5 62 7-80 298-359 (362)
18 3g7q_A Valine-pyruvate aminotr 86.4 2.4 8.2E-05 33.4 7.4 69 6-80 339-411 (417)
19 2fyf_A PSAT, phosphoserine ami 86.2 2.7 9.3E-05 33.2 7.6 64 7-80 333-396 (398)
20 2zyj_A Alpha-aminodipate amino 85.7 3.3 0.00011 32.5 7.8 68 6-80 324-391 (397)
21 3ffh_A Histidinol-phosphate am 85.6 2.4 8.3E-05 32.7 6.9 57 7-78 306-362 (363)
22 1m32_A 2-aminoethylphosphonate 85.1 2.4 8.3E-05 32.3 6.6 65 6-80 298-363 (366)
23 3zrp_A Serine-pyruvate aminotr 84.7 3.4 0.00012 31.7 7.4 65 5-81 298-362 (384)
24 3dzz_A Putative pyridoxal 5'-p 84.6 2.2 7.5E-05 33.1 6.3 65 7-80 322-387 (391)
25 1jg8_A L-ALLO-threonine aldola 83.8 3.2 0.00011 31.7 6.8 62 6-80 283-344 (347)
26 3euc_A Histidinol-phosphate am 83.7 1.9 6.4E-05 33.4 5.5 59 7-79 307-365 (367)
27 2gb3_A Aspartate aminotransfer 83.7 4.4 0.00015 32.0 7.8 66 7-80 329-400 (409)
28 3l8a_A METC, putative aminotra 83.5 1.5 5.1E-05 35.1 4.9 64 7-79 355-419 (421)
29 3cq5_A Histidinol-phosphate am 83.4 3.7 0.00013 31.9 7.2 57 6-80 310-366 (369)
30 4dq6_A Putative pyridoxal phos 83.0 3.9 0.00013 31.7 7.1 63 8-79 327-390 (391)
31 2yrr_A Aminotransferase, class 83.0 3.7 0.00013 31.0 6.8 66 5-80 285-351 (353)
32 3kax_A Aminotransferase, class 82.6 4.6 0.00016 31.1 7.3 63 8-79 319-382 (383)
33 2dr1_A PH1308 protein, 386AA l 82.1 5.1 0.00018 30.8 7.4 66 5-80 312-377 (386)
34 3ez1_A Aminotransferase MOCR f 81.7 5 0.00017 31.7 7.4 68 7-81 346-414 (423)
35 1gd9_A Aspartate aminotransfer 81.4 2.3 7.9E-05 33.2 5.2 65 7-80 319-384 (389)
36 3h14_A Aminotransferase, class 80.4 4.6 0.00016 31.5 6.7 67 6-80 313-380 (391)
37 3fdb_A Beta C-S lyase, putativ 80.0 2.8 9.7E-05 32.3 5.3 64 8-80 311-374 (377)
38 2po3_A 4-dehydrase; external a 79.6 9.2 0.00031 30.4 8.3 71 7-81 297-385 (424)
39 4eb5_A Probable cysteine desul 79.5 6.3 0.00022 30.2 7.1 70 6-81 289-372 (382)
40 2zc0_A Alanine glyoxylate tran 79.3 5.9 0.0002 31.0 7.0 68 6-80 334-402 (407)
41 3hdo_A Histidinol-phosphate am 79.2 8.5 0.00029 29.7 7.8 59 7-79 294-352 (360)
42 1fc4_A 2-amino-3-ketobutyrate 79.0 2.6 8.8E-05 33.1 4.8 68 6-80 328-395 (401)
43 2fnu_A Aminotransferase; prote 78.5 1 3.4E-05 34.9 2.2 70 7-80 284-370 (375)
44 3fkd_A L-threonine-O-3-phospha 78.4 7.9 0.00027 29.6 7.4 63 6-80 277-340 (350)
45 3hbx_A GAD 1, glutamate decarb 77.9 6.2 0.00021 32.9 7.0 72 5-82 372-444 (502)
46 1w23_A Phosphoserine aminotran 77.7 4.1 0.00014 31.2 5.5 62 7-80 297-358 (360)
47 3f9t_A TDC, L-tyrosine decarbo 77.6 5.3 0.00018 30.7 6.1 58 6-79 338-395 (397)
48 4hvk_A Probable cysteine desul 77.2 7.8 0.00027 29.5 7.0 69 7-81 290-372 (382)
49 7aat_A Aspartate aminotransfer 76.7 2.6 8.9E-05 33.1 4.2 45 17-79 356-400 (401)
50 1vp4_A Aminotransferase, putat 76.6 4.4 0.00015 32.3 5.6 68 6-80 349-416 (425)
51 3kki_A CAI-1 autoinducer synth 76.2 4.3 0.00015 32.1 5.3 68 6-80 335-402 (409)
52 3qgu_A LL-diaminopimelate amin 76.0 4.5 0.00015 32.4 5.5 64 6-80 374-438 (449)
53 1ax4_A Tryptophanase; tryptoph 75.6 3.1 0.0001 33.5 4.4 73 6-81 352-440 (467)
54 3ftb_A Histidinol-phosphate am 75.4 11 0.00037 28.8 7.4 61 7-79 298-358 (361)
55 1vjo_A Alanine--glyoxylate ami 75.4 8.5 0.00029 29.8 6.8 65 6-79 327-392 (393)
56 3ele_A Amino transferase; RER0 75.3 12 0.00041 29.1 7.7 61 7-80 334-394 (398)
57 3ffr_A Phosphoserine aminotran 75.2 7.8 0.00027 29.4 6.5 61 6-78 300-360 (362)
58 1mdo_A ARNB aminotransferase; 75.1 4.6 0.00016 31.4 5.2 71 6-80 296-384 (393)
59 2r2n_A Kynurenine/alpha-aminoa 75.1 11 0.00039 29.9 7.7 69 6-80 353-422 (425)
60 1t3i_A Probable cysteine desul 74.9 4.8 0.00017 31.4 5.3 70 6-81 340-412 (420)
61 2ch1_A 3-hydroxykynurenine tra 74.8 11 0.00037 29.2 7.3 65 7-80 316-381 (396)
62 3ppl_A Aspartate aminotransfer 74.2 8.6 0.0003 30.5 6.7 68 6-80 350-418 (427)
63 3ruy_A Ornithine aminotransfer 73.8 8.5 0.00029 30.0 6.5 58 6-79 334-391 (392)
64 3mc6_A Sphingosine-1-phosphate 73.7 7.1 0.00024 31.8 6.2 57 13-82 381-437 (497)
65 2z9v_A Aspartate aminotransfer 73.6 9 0.00031 29.6 6.6 67 6-81 303-370 (392)
66 2dou_A Probable N-succinyldiam 73.0 6.4 0.00022 30.5 5.6 63 7-79 313-375 (376)
67 3a2b_A Serine palmitoyltransfe 72.9 5.8 0.0002 31.0 5.3 68 6-80 323-390 (398)
68 1kmj_A Selenocysteine lyase; p 72.8 10 0.00035 29.2 6.7 69 6-80 332-403 (406)
69 1j32_A Aspartate aminotransfer 72.6 7.1 0.00024 30.3 5.8 62 8-80 323-385 (388)
70 2x5f_A Aspartate_tyrosine_phen 72.3 10 0.00035 30.0 6.7 57 8-80 370-427 (430)
71 2x5d_A Probable aminotransfera 71.4 9.9 0.00034 29.9 6.4 66 6-81 328-397 (412)
72 1v2d_A Glutamine aminotransfer 71.4 11 0.00037 29.2 6.6 62 7-80 308-369 (381)
73 1d2f_A MALY protein; aminotran 71.4 9.8 0.00034 29.6 6.3 64 7-79 322-386 (390)
74 3ezs_A Aminotransferase ASPB; 71.3 13 0.00045 28.5 7.0 64 6-80 309-373 (376)
75 2eh6_A Acoat, acetylornithine 71.3 8.8 0.0003 29.5 6.0 57 6-78 318-374 (375)
76 3tqx_A 2-amino-3-ketobutyrate 71.1 6.9 0.00023 30.3 5.3 68 6-80 327-394 (399)
77 1c7n_A Cystalysin; transferase 69.7 9.4 0.00032 29.7 5.9 64 8-80 327-391 (399)
78 2huf_A Alanine glyoxylate amin 69.4 17 0.0006 27.9 7.4 66 6-80 315-381 (393)
79 2bwn_A 5-aminolevulinate synth 69.4 5.7 0.00019 31.1 4.5 68 6-80 330-398 (401)
80 1sff_A 4-aminobutyrate aminotr 69.3 7.6 0.00026 30.5 5.3 64 6-80 352-422 (426)
81 2c81_A Glutamine-2-deoxy-scyll 69.2 16 0.00054 28.8 7.2 71 7-80 304-412 (418)
82 3jtx_A Aminotransferase; NP_28 69.1 15 0.00052 28.4 6.9 66 6-79 326-395 (396)
83 3isl_A Purine catabolism prote 68.1 24 0.00083 27.3 8.0 67 6-81 322-389 (416)
84 1bs0_A Protein (8-amino-7-oxon 68.1 4.1 0.00014 31.6 3.4 65 6-77 318-382 (384)
85 3d6k_A Putative aminotransfera 67.8 16 0.00055 29.0 7.0 67 7-80 349-416 (422)
86 2ord_A Acoat, acetylornithine 67.5 18 0.00061 28.2 7.1 60 7-80 336-395 (397)
87 1elu_A L-cysteine/L-cystine C- 67.2 7.2 0.00025 30.0 4.7 58 6-76 329-386 (390)
88 4h51_A Aspartate aminotransfer 66.9 9.1 0.00031 31.5 5.5 46 17-81 371-416 (420)
89 3f0h_A Aminotransferase; RER07 65.8 9.5 0.00033 29.3 5.1 57 15-80 315-372 (376)
90 1b5p_A Protein (aspartate amin 65.7 9.2 0.00031 29.9 5.1 57 8-75 322-378 (385)
91 1c4k_A Protein (ornithine deca 65.4 14 0.00049 32.8 6.8 54 14-80 511-564 (730)
92 1xi9_A Putative transaminase; 65.4 12 0.00041 29.4 5.7 64 8-80 336-401 (406)
93 3piu_A 1-aminocyclopropane-1-c 64.2 12 0.00041 29.7 5.6 67 6-80 358-430 (435)
94 3p1t_A Putative histidinol-pho 64.1 18 0.00061 27.2 6.3 56 8-79 279-334 (337)
95 1qz9_A Kynureninase; kynurenin 64.0 21 0.00071 27.8 6.9 59 6-80 342-400 (416)
96 1o69_A Aminotransferase; struc 63.9 8 0.00027 30.5 4.4 60 17-80 311-385 (394)
97 2oqx_A Tryptophanase; lyase, p 63.5 15 0.00052 29.3 6.1 73 6-81 353-441 (467)
98 3e9k_A Kynureninase; kynurenin 62.8 6.1 0.00021 31.9 3.6 58 7-80 401-459 (465)
99 3ju7_A Putative PLP-dependent 62.2 6.5 0.00022 31.3 3.6 63 17-80 298-373 (377)
100 3nnk_A Ureidoglycine-glyoxylat 61.6 28 0.00097 26.8 7.2 66 6-81 322-389 (411)
101 3dr4_A Putative perosamine syn 61.5 6.1 0.00021 30.9 3.3 69 7-79 306-390 (391)
102 3aow_A Putative uncharacterize 61.0 30 0.001 27.9 7.5 67 7-80 377-443 (448)
103 1wyu_B Glycine dehydrogenase s 59.7 18 0.00061 29.6 5.9 65 7-80 375-439 (474)
104 1fg7_A Histidinol phosphate am 59.7 15 0.00052 28.4 5.3 54 7-76 298-352 (356)
105 1o4s_A Aspartate aminotransfer 59.6 25 0.00086 27.4 6.6 59 7-79 327-386 (389)
106 2pb2_A Acetylornithine/succiny 59.4 28 0.00094 27.7 6.9 61 7-80 355-416 (420)
107 2w8t_A SPT, serine palmitoyltr 58.8 18 0.00062 28.8 5.7 70 5-81 345-414 (427)
108 1z7d_A Ornithine aminotransfer 58.1 35 0.0012 27.4 7.4 61 7-80 367-427 (433)
109 4eu1_A Mitochondrial aspartate 57.6 11 0.00038 29.6 4.2 45 17-79 364-408 (409)
110 3rq1_A Aminotransferase class 57.2 23 0.00078 27.8 6.0 47 19-80 367-413 (418)
111 1v72_A Aldolase; PLP-dependent 56.6 19 0.00064 27.2 5.2 58 6-80 294-351 (356)
112 3fvs_A Kynurenine--oxoglutarat 56.4 6.3 0.00022 31.0 2.6 54 21-80 365-420 (422)
113 2oat_A Ornithine aminotransfer 56.3 42 0.0015 26.9 7.6 61 7-80 376-437 (439)
114 1vef_A Acetylornithine/acetyl- 55.3 25 0.00085 27.3 5.9 57 7-79 337-394 (395)
115 2z61_A Probable aspartate amin 55.0 19 0.00065 27.6 5.1 61 7-79 307-368 (370)
116 4adb_A Succinylornithine trans 54.1 49 0.0017 25.5 7.4 61 7-80 337-398 (406)
117 3kgw_A Alanine-glyoxylate amin 54.1 51 0.0017 25.0 7.4 66 7-81 321-387 (393)
118 3uwc_A Nucleotide-sugar aminot 53.6 18 0.00061 27.7 4.7 58 19-80 294-369 (374)
119 3bb8_A CDP-4-keto-6-deoxy-D-gl 53.6 23 0.00077 28.3 5.5 60 17-80 356-434 (437)
120 2o0r_A RV0858C (N-succinyldiam 52.8 24 0.00081 27.7 5.4 68 7-80 317-394 (411)
121 1iay_A ACC synthase 2, 1-amino 52.8 28 0.00096 27.4 5.9 66 7-80 354-425 (428)
122 2dgk_A GAD-beta, GADB, glutama 52.7 41 0.0014 27.0 6.9 69 6-80 361-432 (452)
123 4f4e_A Aromatic-amino-acid ami 51.7 16 0.00055 28.9 4.3 45 17-79 375-419 (420)
124 1yiz_A Kynurenine aminotransfe 50.8 27 0.00092 27.5 5.4 68 6-79 345-426 (429)
125 1uu1_A Histidinol-phosphate am 50.4 11 0.00038 28.7 3.0 49 8-75 283-331 (335)
126 1ybx_A Conserved hypothetical 50.0 21 0.00071 25.8 4.2 51 50-128 90-141 (143)
127 1yaa_A Aspartate aminotransfer 49.9 22 0.00076 27.8 4.8 46 17-80 364-409 (412)
128 3dfz_A SIRC, precorrin-2 dehyd 49.5 33 0.0011 26.0 5.6 58 21-79 106-165 (223)
129 2ez2_A Beta-tyrosinase, tyrosi 49.4 22 0.00077 28.3 4.8 73 6-81 342-430 (456)
130 3op7_A Aminotransferase class 48.9 31 0.0011 26.4 5.5 61 8-80 308-369 (375)
131 3fsl_A Aromatic-amino-acid ami 48.6 19 0.00065 27.8 4.2 44 17-78 353-396 (397)
132 1bw0_A TAT, protein (tyrosine 48.0 61 0.0021 25.1 7.1 52 18-80 359-411 (416)
133 1eg5_A Aminotransferase; PLP-d 47.0 53 0.0018 24.9 6.5 68 8-81 294-375 (384)
134 3dyd_A Tyrosine aminotransfera 46.0 66 0.0022 25.4 7.1 53 17-80 369-422 (427)
135 2e7j_A SEP-tRNA:Cys-tRNA synth 46.0 9.1 0.00031 29.2 1.9 67 6-80 300-368 (371)
136 1s0a_A Adenosylmethionine-8-am 45.8 57 0.002 25.6 6.7 59 7-80 364-422 (429)
137 3asa_A LL-diaminopimelate amin 45.3 29 0.001 27.1 4.9 65 6-80 325-391 (400)
138 2o1b_A Aminotransferase, class 45.3 31 0.0011 27.1 5.0 62 8-79 338-400 (404)
139 3ei9_A LL-diaminopimelate amin 45.2 47 0.0016 26.1 6.1 59 6-75 362-421 (432)
140 3ihj_A Alanine aminotransferas 45.0 60 0.002 26.7 6.9 57 16-80 433-491 (498)
141 1wyu_A Glycine dehydrogenase ( 43.9 53 0.0018 26.1 6.3 61 7-78 376-436 (438)
142 3meb_A Aspartate aminotransfer 43.9 29 0.00098 27.9 4.7 47 17-80 396-442 (448)
143 1u08_A Hypothetical aminotrans 43.9 66 0.0023 24.7 6.7 63 6-75 319-383 (386)
144 2vyc_A Biodegradative arginine 43.8 33 0.0011 30.4 5.4 60 7-79 534-602 (755)
145 1svv_A Threonine aldolase; str 43.6 9.6 0.00033 28.8 1.7 60 6-80 297-356 (359)
146 2q7w_A Aspartate aminotransfer 43.0 23 0.0008 27.3 3.9 43 18-78 353-395 (396)
147 3mad_A Sphingosine-1-phosphate 42.8 54 0.0018 26.8 6.3 58 14-82 412-469 (514)
148 1b9h_A AHBA synthase, protein 42.7 18 0.00063 27.9 3.2 71 6-80 290-386 (388)
149 2q5z_A MAZG, hypothetical prot 41.9 27 0.00092 23.6 3.6 15 111-125 99-113 (114)
150 3b1d_A Betac-S lyase; HET: PLP 47.3 5.6 0.00019 31.2 0.0 61 10-79 329-390 (392)
151 3cai_A Possible aminotransfera 41.0 54 0.0019 25.2 5.8 61 8-76 337-403 (406)
152 3nx3_A Acoat, acetylornithine 40.8 89 0.003 24.1 7.0 61 6-80 333-393 (395)
153 2aeu_A Hypothetical protein MJ 40.2 31 0.0011 27.0 4.3 52 23-81 319-370 (374)
154 4gyw_A UDP-N-acetylglucosamine 39.8 38 0.0013 29.8 5.2 20 108-127 670-689 (723)
155 1lc5_A COBD, L-threonine-O-3-p 39.0 44 0.0015 25.5 4.9 60 8-80 299-358 (364)
156 1pff_A Methionine gamma-lyase; 38.8 42 0.0014 25.2 4.7 63 6-76 245-328 (331)
157 1ajs_A Aspartate aminotransfer 37.9 45 0.0015 25.9 4.8 45 18-80 365-409 (412)
158 3bwn_A AT1G70560, L-tryptophan 36.9 25 0.00085 27.8 3.2 58 8-79 327-384 (391)
159 3t18_A Aminotransferase class 36.4 53 0.0018 25.6 5.0 37 9-59 359-395 (413)
160 2ay1_A Aroat, aromatic amino a 36.3 40 0.0014 25.9 4.3 42 19-78 351-392 (394)
161 2a3q_A Hypothetical protein; M 36.1 49 0.0017 24.1 4.5 17 111-127 116-132 (170)
162 3ke3_A Putative serine-pyruvat 35.8 43 0.0015 26.1 4.4 53 24-80 322-374 (379)
163 3qm2_A Phosphoserine aminotran 35.5 73 0.0025 25.7 5.9 62 7-80 322-383 (386)
164 3vax_A Putative uncharacterize 34.6 18 0.00063 27.9 2.0 65 7-79 317-397 (400)
165 3lvm_A Cysteine desulfurase; s 33.0 81 0.0028 24.4 5.6 68 7-82 318-399 (423)
166 3n75_A LDC, lysine decarboxyla 32.6 56 0.0019 29.1 5.0 47 17-76 508-554 (715)
167 3nhm_A Response regulator; pro 32.2 94 0.0032 19.4 5.0 73 6-81 48-122 (133)
168 3pj0_A LMO0305 protein; struct 32.2 34 0.0012 25.9 3.2 66 6-77 289-357 (359)
169 3lws_A Aromatic amino acid bet 32.0 31 0.0011 26.2 2.9 68 6-78 287-355 (357)
170 2x3l_A ORN/Lys/Arg decarboxyla 31.1 40 0.0014 27.3 3.6 56 9-80 296-351 (446)
171 3f6t_A Aspartate aminotransfer 31.0 58 0.002 27.1 4.7 51 21-80 473-523 (533)
172 3e2y_A Kynurenine-oxoglutarate 30.9 53 0.0018 25.3 4.2 65 6-76 330-407 (410)
173 3cu5_A Two component transcrip 30.9 1.1E+02 0.0037 19.7 6.4 73 6-81 50-123 (141)
174 3m5u_A Phosphoserine aminotran 30.3 1.2E+02 0.0042 24.0 6.4 62 7-80 296-358 (361)
175 2w84_A Peroxisomal membrane pr 30.0 18 0.00061 23.2 1.0 22 13-34 42-63 (70)
176 3ol3_A Putative uncharacterize 29.2 1.2E+02 0.004 20.8 5.2 26 52-77 33-58 (107)
177 4f21_A Carboxylesterase/phosph 29.0 72 0.0025 23.7 4.5 45 19-80 201-245 (246)
178 3b8x_A WBDK, pyridoxamine 5-ph 28.0 54 0.0019 25.3 3.8 30 7-36 304-334 (390)
179 3n53_A Response regulator rece 27.2 73 0.0025 20.3 3.8 73 6-81 47-122 (140)
180 3r8n_M 30S ribosomal protein S 25.7 1E+02 0.0036 21.1 4.5 38 16-75 22-59 (114)
181 2oga_A Transaminase; PLP-depen 25.6 1.1E+02 0.0038 23.7 5.3 58 19-80 319-394 (399)
182 2eo5_A 419AA long hypothetical 25.4 81 0.0028 24.8 4.4 60 7-80 357-416 (419)
183 2hox_A ALLIIN lyase 1; cystein 25.3 99 0.0034 24.7 5.0 61 6-79 361-422 (427)
184 2xzm_M RPS18E; ribosome, trans 25.2 1.1E+02 0.0037 22.2 4.7 40 16-77 36-75 (155)
185 3ff5_A PEX14P, peroxisomal bio 25.0 28 0.00096 21.1 1.2 18 13-30 37-54 (54)
186 3soz_A ORF 245 protein, cytopl 24.8 45 0.0016 25.8 2.7 34 2-35 11-50 (248)
187 1ys7_A Transcriptional regulat 24.7 1.8E+02 0.0062 20.3 5.9 73 6-81 52-125 (233)
188 1ayg_A Cytochrome C-552; elect 24.1 52 0.0018 19.6 2.5 20 58-77 59-78 (80)
189 3cg4_A Response regulator rece 23.8 1.4E+02 0.0049 18.8 6.4 72 6-80 52-126 (142)
190 2cjg_A L-lysine-epsilon aminot 23.7 1.4E+02 0.0048 23.8 5.6 60 7-80 387-446 (449)
191 3bn7_A Ferredoxin-like protein 23.5 78 0.0027 21.4 3.5 46 4-59 20-65 (120)
192 3tfu_A Adenosylmethionine-8-am 23.3 2.4E+02 0.0081 22.7 7.0 59 7-80 393-451 (457)
193 1mvo_A PHOP response regulator 22.8 85 0.0029 19.7 3.5 72 6-80 48-120 (136)
194 1yio_A Response regulatory pro 22.4 1E+02 0.0034 21.3 4.0 72 6-80 49-121 (208)
195 2kts_A Heat shock protein HSLJ 21.9 68 0.0023 21.2 2.9 34 48-81 55-88 (117)
196 1zod_A DGD, 2,2-dialkylglycine 21.6 1.9E+02 0.0065 22.5 5.9 53 19-80 378-430 (433)
197 3a8u_X Omega-amino acid--pyruv 21.4 1.9E+02 0.0065 22.7 5.9 60 7-80 382-445 (449)
198 3tcm_A Alanine aminotransferas 21.4 1.3E+02 0.0046 24.5 5.1 50 23-80 443-492 (500)
199 3cu4_A Cytochrome C family pro 21.3 57 0.0019 19.6 2.2 16 62-77 67-82 (85)
200 3j20_O 30S ribosomal protein S 21.0 1.1E+02 0.0039 21.9 4.0 40 16-77 29-68 (148)
201 1vpq_A Hypothetical protein TM 20.8 2.2E+02 0.0074 22.0 6.0 73 8-80 151-241 (273)
202 2vqe_M 30S ribosomal protein S 20.6 82 0.0028 22.1 3.1 40 16-77 23-62 (126)
203 3iz6_M 40S ribosomal protein S 20.1 1.3E+02 0.0046 21.6 4.3 40 16-77 34-73 (152)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=268.16 Aligned_cols=125 Identities=43% Similarity=0.711 Sum_probs=111.7
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVK 84 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~~ 84 (138)
-||||||||+++|++|++|+++|+++||+||||+||+|++|++||||||||||+|||||+|+||++||+||+++|....+
T Consensus 364 dnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~~~~ 443 (490)
T 3ou5_A 364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLE 443 (490)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hhhccccchhhhhHhhhhcc-ccHHHHHHHHHHHHHHHhhCCCCCccc
Q 032537 85 IKSETQGTKLKDFVATTQSA-NFQSEIAKRCHDVEEYAKQFPTIGFEK 131 (138)
Q Consensus 85 ~~~~~~g~~~~df~~~~~~~-~~~~~~~~ir~~V~~l~~~fp~~~~~~ 131 (138)
++.. ..+++||+..+..+ ++.+.++++|++|.+||++||+|++|+
T Consensus 444 ~~~~--~~kl~~f~~~~~~~~~~~~~i~~lr~~V~~l~~~FP~pg~d~ 489 (490)
T 3ou5_A 444 VKSK--TAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 489 (490)
T ss_dssp HHHT--CCSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCSC
T ss_pred hhhh--hhhhHHHHHHHhcCcccHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7654 34688988655322 224578999999999999999999874
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=2.5e-26 Score=197.80 Aligned_cols=124 Identities=44% Similarity=0.718 Sum_probs=111.2
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVK 84 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~~ 84 (138)
-||++++|+++.|++|.++++.|+++||.+|+|++|+|.+|+.+|||||||+++|+||++++||++++++|.+++....+
T Consensus 364 ~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~~~ 443 (490)
T 2a7v_A 364 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLE 443 (490)
T ss_dssp SSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hhhccccchhhhhHhhhhcccc-HHHHHHHHHHHHHHHhhCCCCCcc
Q 032537 85 IKSETQGTKLKDFVATTQSANF-QSEIAKRCHDVEEYAKQFPTIGFE 130 (138)
Q Consensus 85 ~~~~~~g~~~~df~~~~~~~~~-~~~~~~ir~~V~~l~~~fp~~~~~ 130 (138)
++.+. ++++||++.+.+++. ...+.++|++|.+|+++||+|+++
T Consensus 444 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 488 (490)
T 2a7v_A 444 VKSKT--AKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFD 488 (490)
T ss_dssp HHHHC--CSHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTTSCCSSCS
T ss_pred hhhhh--chhhHHHhhhccChhhHHHHHHHHHHHHHHHHhCCCCCcC
Confidence 76553 568999987764321 235789999999999999999975
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.82 E-value=1.1e-19 Score=154.00 Aligned_cols=125 Identities=45% Similarity=0.691 Sum_probs=104.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhhhh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKI 85 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~~~ 85 (138)
+|++++|++..|+++.++++.|+++||.+++|.+|++.+++.+++||||++++|+|||+++||+++++.|.+++..+..+
T Consensus 355 ~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~~~~~ 434 (483)
T 1rv3_A 355 NHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQI 434 (483)
T ss_dssp SSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHhccch
Confidence 69999999988999999999999999999999999987777889999999999999999999999999999999764332
Q ss_pred hhccc-cchhhhhHhhhhccc-cHHHHHHHHHHHHHHHhhCCCCCcc
Q 032537 86 KSETQ-GTKLKDFVATTQSAN-FQSEIAKRCHDVEEYAKQFPTIGFE 130 (138)
Q Consensus 86 ~~~~~-g~~~~df~~~~~~~~-~~~~~~~ir~~V~~l~~~fp~~~~~ 130 (138)
+.... ++.++||++.+.++. ....++++|++|.+||.+||+|++|
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (483)
T 1rv3_A 435 QDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLP 481 (483)
T ss_dssp HHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCSSS
T ss_pred hccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCCcC
Confidence 32111 236889998886431 0126789999999999999999875
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.66 E-value=3.8e-16 Score=130.18 Aligned_cols=107 Identities=31% Similarity=0.512 Sum_probs=83.5
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.+|++++|+++.|+++..+.+.|++.||.+++|.+|++. +|+.++|||||++++|+||++++|+.+++++|.++|....
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~ 415 (447)
T 3h7f_A 336 DVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGS 415 (447)
T ss_dssp SSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccC
Confidence 478999999999999999999999999999999999985 7888999999999999999999999999999999986310
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCCCC-cccccc
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG-FEKETM 134 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~~~-~~~~~~ 134 (138)
+ . . ++++|++|.+|+++||+|. ++.|++
T Consensus 416 -------------------~-~--~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 444 (447)
T 3h7f_A 416 -------------------S-V--D-VSALKDRATRLARAFPLYDGLEEWSL 444 (447)
T ss_dssp -------------------G-C--C-HHHHHHHHHHHHHHSCSSTTGGGCBS
T ss_pred -------------------c-h--h-HHHHHHHHHHHHHhCCCCCCchhhhh
Confidence 1 1 2 6789999999999999964 665554
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.43 E-value=1.6e-12 Score=105.08 Aligned_cols=102 Identities=28% Similarity=0.456 Sum_probs=90.9
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.+|++++++++.|+++..+.+.|++.||.++....|+.. +++.++|+|||++.+|++++.++|+.++++.|.+++....
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 390 (417)
T 3n0l_A 311 DNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVN 390 (417)
T ss_dssp SSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred CceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhccc
Confidence 368999999988999999999999999999999999986 7788899999999999999999999999999999986310
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCCCC
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~~~ 128 (138)
+ ...+++++++|.+|+.+||+|.
T Consensus 391 -------------------~---~~~~~~~~~~v~~~~~~~~~~~ 413 (417)
T 3n0l_A 391 -------------------N---EKLQENIKQELKKLASNFIIYE 413 (417)
T ss_dssp -------------------C---HHHHHHHHHHHHHHHTTCCCCS
T ss_pred -------------------c---hhhHHHHHHHHHHHHhcCCCcc
Confidence 1 2467899999999999999976
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.31 E-value=1.9e-11 Score=98.49 Aligned_cols=102 Identities=28% Similarity=0.475 Sum_probs=89.4
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.+|++++++.+.++++..+.+.|++.||.+..+..|++. +++.++|||||.+.+|+|++.++|+.++++.|.+++...
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~- 396 (420)
T 3gbx_A 318 ENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI- 396 (420)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT-
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc-
Confidence 468899999888889999999999999999999999886 678889999999999999999999999999999988631
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCCCC
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTIG 128 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~~~ 128 (138)
.+ ...+++++++|.+|+++||+|.
T Consensus 397 ------------------~~---~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
T 3gbx_A 397 ------------------ND---EATIERVKAKVLDICARFPVYA 420 (420)
T ss_dssp ------------------TC---HHHHHHHHHHHHHHHHHSCSCC
T ss_pred ------------------cc---chhHHHHHHHHHHHHHhCCCCC
Confidence 01 2467899999999999999973
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.17 E-value=2.5e-10 Score=92.13 Aligned_cols=106 Identities=26% Similarity=0.404 Sum_probs=88.4
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.+|++++++.+.++++..+.+.|++.||.+.....|+.. +++.+++||||.+.++++++.++|+.++++.|.+++....
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~~ 398 (425)
T 3ecd_A 319 DNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEALR 398 (425)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhccc
Confidence 368899999887889999999999999999988888876 6677889999999999999999999999999999986420
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCCC
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI 127 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~~ 127 (138)
.. ... +...++.++++|.+|++.||+|
T Consensus 399 ~~---------------~~~--~~~~~~~~~~~~~~~~~~~~~~ 425 (425)
T 3ecd_A 399 TN---------------PEG--DHATEQRVRREIFALCERFPIY 425 (425)
T ss_dssp HC---------------TTC--CHHHHHHHHHHHHHHHHTSCCC
T ss_pred cc---------------ccc--CchhHHHHHHHHHHHHhcCCCC
Confidence 00 000 1245788999999999999996
No 8
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.24 E-value=9.8e-06 Score=64.80 Aligned_cols=97 Identities=35% Similarity=0.484 Sum_probs=76.7
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.++++++++...+++..++.+.|.+.||.+.....|... .+..++++||+.+..|+++.+++|+..+.+.|.+++..
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~-- 387 (407)
T 2dkj_A 310 DNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE-- 387 (407)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH--
T ss_pred CceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc--
Confidence 367889998766778999999999999999865544222 23346789999999999999999999999998887742
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCCC
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPTI 127 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~~ 127 (138)
+ . .+.++++|.+|..+||+|
T Consensus 388 --~----------------~------~~~~~~~~~~~~~~~~~~ 407 (407)
T 2dkj_A 388 --G----------------P------SEALREEVRRLALAHPMP 407 (407)
T ss_dssp --C----------------C------CHHHHHHHHHHHHTSCCC
T ss_pred --C----------------c------hHHHHHHHHHHHHhcCCC
Confidence 0 0 135888999999999986
No 9
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.11 E-value=2.6e-05 Score=62.25 Aligned_cols=95 Identities=34% Similarity=0.465 Sum_probs=74.7
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 83 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~ 83 (138)
.++++++++...+++..++.+.|.+.||.+.....|... .+..++++||+.+..|++.++++|+..+.+.|.+++...
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~- 387 (405)
T 2vi8_A 309 DNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV- 387 (405)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT-
T ss_pred CceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc-
Confidence 367889998766788999999999999999876555433 334467899999999999999999999999998887521
Q ss_pred hhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHH
Q 032537 84 KIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYA 121 (138)
Q Consensus 84 ~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~ 121 (138)
+ + ++.+..+|++|.+|+
T Consensus 388 --~----------------~---~~~~~~~~~~~~~~~ 404 (405)
T 2vi8_A 388 --G----------------S---EQALEEARQRVAALT 404 (405)
T ss_dssp --T----------------C---HHHHHHHHHHHHHHH
T ss_pred --c----------------c---cccHHHHHHHHHHhh
Confidence 0 1 234678999999986
No 10
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=89.52 E-value=0.98 Score=35.03 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=43.1
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++... ++.++.+.|.+.||.+..-..++ ++.|||+.. .++|++.+.+.|.+++
T Consensus 308 ~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~------~~~iRis~~-------~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 308 FITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYG------LNAIRITIG-------TSYENEKFFTEFDKIL 364 (365)
T ss_dssp EEEEECSSS--CHHHHHHHHHTTTEECEECGGGT------CSEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCC--CHHHHHHHHHHCCEEEEECccCC------CCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 467887653 78888899988999987543333 568999964 6889988888777665
No 11
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=89.37 E-value=0.7 Score=35.36 Aligned_cols=65 Identities=14% Similarity=0.094 Sum_probs=47.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++.+++.. ++++.++.+.|.+.||.+....-| ..++.|||+....+ +++|+.++.+.|.+++.
T Consensus 282 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~ 346 (352)
T 1iug_A 282 PAVAAFYLPE-GVPYARVKEAFAQRGAVIAGGQGP-----LKGKVFRLSLMGAY----DRYEALGVAGMFREVLE 346 (352)
T ss_dssp TTCEEEECCT-TCCHHHHHHHHHTTTEECEECCGG-----GTTTEEEECCCSSC----CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCC-CCCHHHHHHHHHHCCEEEEeCCCc-----cCCCEEEEEccccC----CHHHHHHHHHHHHHHHH
Confidence 4677787643 678888988898889998744311 22467999987644 47899888888877764
No 12
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=89.32 E-value=1.1 Score=35.68 Aligned_cols=64 Identities=14% Similarity=0.174 Sum_probs=45.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++.+++++. ++++.++.+.|.+.||.+. |+.. ....++.|||+... .+++|++...+.|.+++.
T Consensus 371 ~~~~~~~~~--~~~~~~l~~~L~~~gi~v~----~~~~~~~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 371 GFYFTVGYK--GMDSSKLIEKFVRYGMCAI----TLKTTGSKRNEAMRICTSL-----LPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp SSEEEEEET--TCCHHHHHHHHHHTTEECE----ESTTTTCCCTTCEEEECSS-----SCGGGHHHHHHHHHHHHH
T ss_pred eEEEEEecC--CCCHHHHHHHHHHcCeEEe----eccccCCCCCCEEEEEEec-----CCHHHHHHHHHHHHHHHh
Confidence 456788876 7889999999988999987 3332 22223679997542 267899888887777653
No 13
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=88.85 E-value=1.7 Score=33.44 Aligned_cols=58 Identities=9% Similarity=0.004 Sum_probs=43.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++.. ++.++.+.|.+.||.+. ...++ .++.|||+.. .++|++.+.+.|.+++.
T Consensus 293 ~~~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 293 NFVFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG-------TPQEMQWVADTMREFRK 350 (354)
T ss_dssp SEEEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 447788764 78888899999999987 33322 3568999953 57899998888887774
No 14
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=88.35 E-value=1.2 Score=35.01 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=47.0
Q ss_pred eEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++...+++..+..+.| ++.||.+..-..++ +..++.|||+... .++|+.+..+.|.+++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 338 SYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ------DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp SEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC------CHHHHHHHHHHHHHHHH
Confidence 566788876678888888877 56899987544333 2235789999652 68899888888877774
No 15
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=88.27 E-value=1.1 Score=34.73 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=46.9
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++.+++.. +.++.+.|.+.||.+.. +......++.+||+....+.+..+++|++++.+.|.+++.
T Consensus 315 ~~~~~~~~~~~----~~~~~~~l~~~gi~v~~----g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 315 AHGLTAVYVAD----PPDVIAFLKSHGVVIAG----GIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp CSSCEEEECSC----HHHHHHHHHHTTEECBC----CCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred CCceEEEecCC----HHHHHHHHHHCCeEEeC----CCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 46778888742 67788888889999863 2221122467999954444456688999999988877763
No 16
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=87.36 E-value=2.4 Score=33.86 Aligned_cols=69 Identities=16% Similarity=0.071 Sum_probs=48.7
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCC--CCCC---CCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVP--GDVS---AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP--~d~~---~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++...++++.++...|.+.||.+..-... +... +...+.|||+.+. .++|+.+..+.|.+++.
T Consensus 365 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~------~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 365 AIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA------DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp SSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS------CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC------CHHHHHHHHHHHHHHHH
Confidence 34567888766789999999999999998753322 1111 1123679999763 68898888888877774
No 17
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=87.04 E-value=1 Score=34.92 Aligned_cols=62 Identities=15% Similarity=0.125 Sum_probs=42.6
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.+.+.+.. +.++.++.+.|++.||.+ .|+... .++|||+....++ ++|++.+.+.|.+++.
T Consensus 298 ~~~~~~~~~-~~~~~~~~~~L~~~gi~~----~~g~~~---~~~iRis~~~~~~----~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 298 MNITFRLAS-EELEKEFVKASEQEGFVG----LKGHRS---VGGLRASIYNAVP----YESCEALVQFMEHFKR 359 (362)
T ss_dssp SEEEEECSC-HHHHHHHHHHHHHTTEES----CBCCTT---TCSEEEECCTTSC----HHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCC-cchHHHHHHHHHHCCCee----ccCCCC---CCEEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 456666542 456778888899999975 244322 3579999765443 7999999988877653
No 18
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=86.44 E-value=2.4 Score=33.36 Aligned_cols=69 Identities=9% Similarity=0.001 Sum_probs=48.5
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC--CCC--CCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV--SAM--VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~--~~~--~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++...+++..++...|.+.||.+..-...+.. .+. .++.|||+... .++|+++..+.|.+++.
T Consensus 339 g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~------~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 339 AIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP------EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp SSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS------CHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 45677888776889999999999999998743221111 100 14679998642 78899888888887775
No 19
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=86.16 E-value=2.7 Score=33.18 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=45.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++++++.. |+++.++.+.|.+.||.+... +. ....+.|||+....+ +++|++.+.+.|.+++.
T Consensus 333 ~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~g---~~--~~~~~~iRis~~~~~----t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 333 VVGTIDFVD-DVDAGTVAKILRANGIVDTEP---YR--KLGRNQLRVAMFPAV----EPDDVSALTECVDWVVE 396 (398)
T ss_dssp SEEEEEECT-TSCHHHHHHHHHHTTCBCCSC---CT--TTCSSEEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCC-CCCHHHHHHHHHHCCcEEecC---cc--cCCCCEEEEEecCCC----CHHHHHHHHHHHHHHHH
Confidence 477888743 788888888888889998531 11 112467999977543 57999988888877663
No 20
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=85.68 E-value=3.3 Score=32.51 Aligned_cols=68 Identities=12% Similarity=0.012 Sum_probs=46.1
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++.. ++++.+..+.|.+.||.+......+ ..+..++.|||+.... +++|+++..+.|.+++.
T Consensus 324 g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~-~~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~ 391 (397)
T 2zyj_A 324 GMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFF-ANGGGENTLRLSYATL-----DREGIAEGVRRLGRALK 391 (397)
T ss_dssp SSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGC-TTSCCTTEEEEECSSS-----CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhc-CCCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHHHH
Confidence 3567788754 6788888888877899987432211 1111246799997543 68899888888877764
No 21
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=85.60 E-value=2.4 Score=32.71 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=41.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
..+++++.. ++.++.+.|.+.||.+..-..++. ++.|||+.. .++|++.+.+.|.++
T Consensus 306 ~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 306 NFVLIDLGI---EAGTIFSYLEKNGYITRSGAALGF-----PTAVRITIG-------KEEDNSAVIALLEKL 362 (363)
T ss_dssp SEEEEECSS---CHHHHHHHHHHTTEECEETTTTTC-----TTEEEEECC-------CHHHHHHHHHHHHHH
T ss_pred eEEEEECCC---CHHHHHHHHHHCCeEEEeCccCCC-----CCeEEEECC-------CHHHHHHHHHHHHHh
Confidence 456778753 788888899899999875333222 568999954 788998888777654
No 22
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=85.07 E-value=2.4 Score=32.28 Aligned_cols=65 Identities=12% Similarity=0.032 Sum_probs=46.6
Q ss_pred eeEEEEeccC-CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQ-QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~-~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++.+++.. .+++..++.+.|.+.||.+..... +.++.|||+....+ .++|++++.+.|.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 298 PIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKV------SQSDCFRIGNIGEV----YAADITALLTAIRTAMY 363 (366)
T ss_dssp SSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCC------SSSCEEEEECCSSC----CHHHHHHHHHHHHHHCT
T ss_pred ceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcC------CCCCEEEEecCCCC----CHHHHHHHHHHHHHHHH
Confidence 4577888753 267888888888888999863221 13468999976543 57999998888877663
No 23
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=84.74 E-value=3.4 Score=31.74 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=47.9
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
..+++.+.+.. .+..++.+.|.+.||.+. |+...+. +.|||+.... .+++|++++.+.|.+++..
T Consensus 298 ~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~----~g~~~~~--~~iRi~~~~~----~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 298 SNTVTGVILKV--ADPQKVLAGTVNEGVEFA----PGVHPAF--KYFRIGHMGW----VTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp CSSEEEEECSS--SCHHHHHHHHHTTTCCCE----ECCCTTC--CEEEEECCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEECCC--CCHHHHHHHHHHCCEEEe----cCCCCCc--CEEEEecccc----CCHHHHHHHHHHHHHHHHH
Confidence 35677777654 688888888888899987 3332111 6799996654 4679999999999998864
No 24
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=84.61 E-value=2.2 Score=33.11 Aligned_cols=65 Identities=12% Similarity=-0.025 Sum_probs=45.7
Q ss_pred eEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++...++++.++.+.| ++.||.+......+. ..++.|||+.. ..++|+.+..+.|.+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~------~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 322 YLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRG---NGHEFVRINLA------CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp SEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCT---TGGGEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 345688877778899988888 699999874322111 12467999855 357888888888777764
No 25
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=83.79 E-value=3.2 Score=31.72 Aligned_cols=62 Identities=13% Similarity=0.132 Sum_probs=45.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++...++++.+..+.|.+.||.+.. +. .+.|||.... +.+++|++++.+.|.+++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~----~~-----~~~iRl~~~~----~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 283 TNMVILRTDNLKVNAHGFIEALRNSGVLANA----VS-----DTEIRLVTHK----DVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp SSEEEEECTTSSSCHHHHHHHHHHHTEECEE----EE-----TTEEEEECCT----TSCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccccCCHHHHHHHHHHCCCEEec----CC-----CCeEEEEeCC----CCCHHHHHHHHHHHHHHHH
Confidence 5678888754467888898888899999863 22 2469996532 3588999999888877663
No 26
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=83.72 E-value=1.9 Score=33.45 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=42.0
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+++++. ++.++.+.|.+.||.+..-.-. .+..++.|||+.. +++|++.+.+.|.+++
T Consensus 307 ~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~---~~~~~~~iRis~~-------~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 307 NFLLARVP----DAAQTFDRLLARKVLIKNVSKM---HPLLANCLRVTVS-------TPEENAQFLEAFAASL 365 (367)
T ss_dssp SEEEEECS----CHHHHHHHHHTTTEECEECGGG---CGGGTTEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred eEEEEECC----CHHHHHHHHHHCCeEEEECCcc---CCCCCCEEEEecC-------CHHHHHHHHHHHHHHh
Confidence 34567765 7888888999999998732221 1223568999953 7899998888887765
No 27
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=83.68 E-value=4.4 Score=32.05 Aligned_cols=66 Identities=6% Similarity=-0.026 Sum_probs=43.3
Q ss_pred eEEEEeccCCCCCHHHHHHHHhh------cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEA------VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~------~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++. +.+..++.+.|.+ .||.+..-...+...+..++.|||+.+ ..++|+.+..+.|.+++.
T Consensus 329 ~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~------~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 329 FYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV------LEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp SEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 45566775 6677777777755 499987432221111123568999865 578899988888887775
No 28
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=83.48 E-value=1.5 Score=35.08 Aligned_cols=64 Identities=11% Similarity=0.028 Sum_probs=43.3
Q ss_pred eEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.++++++...++++.++.+.| ++.||.++.-...+.. ..+.|||+.+ ..++++.+..+.|.+++
T Consensus 355 ~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~---~~~~iRi~~~------~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 355 YLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKE---GKYFARLNVA------TPKNTVQEALSRIISVF 419 (421)
T ss_dssp SEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHHHHHHC
T ss_pred EEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCC---CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 345589887677887777777 6889998753322211 2467999855 35788877777776665
No 29
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=83.44 E-value=3.7 Score=31.91 Aligned_cols=57 Identities=11% Similarity=-0.046 Sum_probs=42.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++.+++++. .++.++.+.|.+.||.+... . .++.|||+.. .++|+..+.+.|.+++.
T Consensus 310 ~~~~~~~~~---~~~~~l~~~l~~~gi~v~~~----~----~~~~iRis~~-------~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 310 SNFVFFGDF---SDQHAAWQAFLDRGVLIRDV----G----IAGHLRTTIG-------VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp SSEEEEECC---SSHHHHHHHHHHTTEECBCC----S----CTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred CeEEEEECC---CCHHHHHHHHHHCCEEEEEC----C----CCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence 356777764 47888888899999998633 1 1467999975 57899888888877763
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=82.98 E-value=3.9 Score=31.68 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=42.7
Q ss_pred EEEEeccCCCCCHHHHHHHHhhc-CceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~-gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++...++++.+..+.|.+. ||.+..-...+. ...+.+||+.. ..++|+.+..+.|.+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~------~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 327 LLWVDFSALGLSDEELESILVQKGKVALNQGNSFGI---GGSGYQRINLA------CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp EEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCT---TCTTEEEEECC------SCHHHHHHHHHHHHHHH
T ss_pred EEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCC---CCCCeEEEEEc------CCHHHHHHHHHHHHHHh
Confidence 44588876678888888888776 999864222111 12467999865 35688888777776665
No 31
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=82.96 E-value=3.7 Score=31.03 Aligned_cols=66 Identities=17% Similarity=0.162 Sum_probs=45.5
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHH-HHHHHHHHHHH
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA-KVAYFFDAAVK 80 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~-~IA~lI~~~l~ 80 (138)
.++++.+++. .++++.+..+.|.+.||.+..-..+. .++.+||+....+ +++|+. ++.+.|.+++.
T Consensus 285 ~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRi~~~~~~----~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 285 LPTVLVVRPP-EGVDADRLVRALYAEGVAVAGGIGPT-----RGQVLRLGLMGEG----ARREAYQAFLKALDRALA 351 (353)
T ss_dssp CTTEEEEECC-TTCCHHHHHHHHHHTTEECEECCGGG-----TTTCEEEECSGGG----SCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECC-CCCCHHHHHHHHHHCCEEEeCCcccc-----CCCeEEEecCccC----CHHHHHHHHHHHHHHHHh
Confidence 4566677763 46788889999988899986433221 2457999975533 457887 88877777664
No 32
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=82.55 E-value=4.6 Score=31.14 Aligned_cols=63 Identities=11% Similarity=-0.005 Sum_probs=43.4
Q ss_pred EEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++...|+++.+..+.|. +.||.+......+. ..++.+||+.. ..++|+.+..+.|.+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRi~~~------~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 319 LLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGL---GGEEHIGINIG------CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCT---TCTTEEEEECS------SCHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcC---CCCCeEEEEEc------CCHHHHHHHHHHHHHHh
Confidence 445888877888988888885 89999874322211 12467999855 25788887777776655
No 33
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=82.09 E-value=5.1 Score=30.81 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=47.6
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++.+++. .+++..++.+.|.+.||.+....-|. .++.|||+... ..+++|+.++.+.|.+++.
T Consensus 312 ~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~~-----~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 312 SPTITAVLTP-PGIKGDEVYEAMRKRGFELAKGYGSV-----KEKTFRIGHMG----YMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp CSSEEEEECC-TTCCHHHHHHHHHHTTEECEECCGGG-----TTTEEEEECCS----SCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcC-CCCCHHHHHHHHHHCCeEEecCcccc-----CCCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 3567888874 36788888888877799987543221 24579999765 2468999999988888775
No 34
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=81.67 E-value=5 Score=31.73 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=46.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
..+++++.. + +...+.+.|.+.||.+....--+.. ....++.|||+.... .++++.+..+.|.+++..
T Consensus 346 ~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 346 YFISLDTAE-P-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-----PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp SCEEEEESS-S-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-----CHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCC-C-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-----CHHHHHHHHHHHHHHHHH
Confidence 456778754 2 7889999999999998752211111 112357899996432 588999988888888753
No 35
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=81.38 E-value=2.3 Score=33.18 Aligned_cols=65 Identities=11% Similarity=0.213 Sum_probs=44.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++...++++.+..+.|. +.||.+.....++.. .++.|||+... .++++.+..+.|.+++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRi~~~~------~~~~i~~~l~~l~~~~~ 384 (389)
T 1gd9_A 319 FYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA---GEGYVRISYAT------AYEKLEEAMDRMERVLK 384 (389)
T ss_dssp TEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG---GTTBEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 3456777655678888877775 899998754332211 24579999652 67888888887777764
No 36
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=80.44 E-value=4.6 Score=31.50 Aligned_cols=67 Identities=12% Similarity=0.041 Sum_probs=44.8
Q ss_pred eeEEEEeccCCCCCHHHHHHH-HhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~-Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++...+.++.++... +++.||.+..-.-.+. +..++.|||+... .++|+.+..+.|.+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~------~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 313 AFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR------ATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp TTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 346677887667788877665 5667999874322222 1224679998554 56888888887777775
No 37
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=80.04 E-value=2.8 Score=32.35 Aligned_cols=64 Identities=23% Similarity=0.207 Sum_probs=44.2
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++...+++...++..+++.||.+......+.. .++.+||+.. ..++++.+..+.|.+++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~~Ris~~------~~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 311 LMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGED---GTGFCRLNFA------TSREVLEEAIDRMAKAVS 374 (377)
T ss_dssp EEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHHHHHHHT
T ss_pred EEEEECcccCCCHHHHHHHHHhCCEEecCChhccCC---CCCEEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence 446888776777677888888889998743222111 2467999855 257888888887777663
No 38
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=79.58 E-value=9.2 Score=30.38 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=46.0
Q ss_pred eEEEEeccC--CCCCHHHHHHHHhhcCceeccccCCC-CC-CCCC-------CCc-------eeecChhhhhcCCCHHHH
Q 032537 7 LLFAKMFHQ--QGIDGSRVEKVLEAVHIAANKNTVPG-DV-SAMV-------PGG-------IRMGTPALTSRGFVEEDF 68 (138)
Q Consensus 7 HlvlvDlr~--~gl~G~~ae~~Le~~gI~vNkn~iP~-d~-~~~~-------~sG-------iRlGT~alTtRG~~e~dm 68 (138)
|++.+++.. .|++..++.+.|.+.||.+....-|. .. +.+. +.. |||+. ...++++|+
T Consensus 297 ~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~----~~~~t~e~i 372 (424)
T 2po3_A 297 QYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPT----GTAIGDDDI 372 (424)
T ss_dssp CCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECC----STTCCHHHH
T ss_pred EEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeC----CCCCCHHHH
Confidence 566676643 26788999999999999987522211 00 1111 111 66663 246789999
Q ss_pred HHHHHHHHHHHHh
Q 032537 69 AKVAYFFDAAVKL 81 (138)
Q Consensus 69 ~~IA~lI~~~l~~ 81 (138)
+.+.+.|.+++..
T Consensus 373 ~~~~~~L~~~~~~ 385 (424)
T 2po3_A 373 RRVADLLRLCATR 385 (424)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999888854
No 39
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=79.53 E-value=6.3 Score=30.25 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=46.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccC--CCCC--C----------CCCCCceeecChhhhhcCCCHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTV--PGDV--S----------AMVPGGIRMGTPALTSRGFVEEDFAKV 71 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~i--P~d~--~----------~~~~sGiRlGT~alTtRG~~e~dm~~I 71 (138)
.+++.+.+. ++++.++.+.|.+.||.+..-.. |... + ....+.|||+.... .+++|++.+
T Consensus 289 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~ 362 (382)
T 4eb5_A 289 PNNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRL 362 (382)
T ss_dssp TTEEEEEET--TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTT----CCHHHHHHH
T ss_pred CCEEEEEeC--CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCC----CCHHHHHHH
Confidence 346667664 67888899999999999864221 1100 0 00136799996533 358999999
Q ss_pred HHHHHHHHHh
Q 032537 72 AYFFDAAVKL 81 (138)
Q Consensus 72 A~lI~~~l~~ 81 (138)
.+.|.+++..
T Consensus 363 ~~~l~~~~~~ 372 (382)
T 4eb5_A 363 LEVLPGVIER 372 (382)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888887754
No 40
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=79.35 E-value=5.9 Score=31.01 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=44.5
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhc-CceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~-gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.++++++.. ++++.+..+.|.+. ||.+..-...+. ....++.|||+.... +++|+++..+.|.+++.
T Consensus 334 ~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 334 GMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYT-DESGKNAIRLNFSRP-----SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp SSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCS-SSCCTTEEEEECSSS-----CTTHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccC-CCCCCCeEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 3467788753 67887777777665 999864322111 111246799986433 57899988888887774
No 41
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=79.19 E-value=8.5 Score=29.65 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=41.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+++++. +.+..++.+.|.+.||.+.. +.. +..++.|||+.. .++|+..+.+.+.++-
T Consensus 294 ~~~~~~~~--~~~~~~l~~~l~~~gi~v~~----~~~-~~~~~~iRis~~-------~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 294 NYLFATPP--DRDGKRVYDGLYARKVLVRH----FSD-PLLAHGMRISIG-------TREEMEQTLAALKEIG 352 (360)
T ss_dssp SEEEEECT--TCCHHHHHHHHHHTTEECBC----CCS-TTTTTSEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred cEEEEECC--CCCHHHHHHHHHHCCEEEEE----CCC-CCCCCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 34566654 56889999999999999864 222 223478999954 7788888877665544
No 42
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=78.96 E-value=2.6 Score=33.07 Aligned_cols=68 Identities=15% Similarity=0.097 Sum_probs=46.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++.. +.+..++.+.|.+.||.+.....|+.+. ..+.|||+.... .+++|+.++.+.|.+++.
T Consensus 328 ~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~--~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 328 HAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVVPK--GQARIRTQMSAA----HTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp SSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSSCT--TCEEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCCCC--CCceEEEEeCCC----CCHHHHHHHHHHHHHHHH
Confidence 5677888742 3456677777888899987654443221 135699997543 357999998888887774
No 43
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=78.47 E-value=1 Score=34.89 Aligned_cols=70 Identities=16% Similarity=0.083 Sum_probs=46.4
Q ss_pred eEEEEeccCCCC-CHHHHHHHHhhcCceeccccCCCCC-CCC--------CC-------CceeecChhhhhcCCCHHHHH
Q 032537 7 LLFAKMFHQQGI-DGSRVEKVLEAVHIAANKNTVPGDV-SAM--------VP-------GGIRMGTPALTSRGFVEEDFA 69 (138)
Q Consensus 7 HlvlvDlr~~gl-~G~~ae~~Le~~gI~vNkn~iP~d~-~~~--------~~-------sGiRlGT~alTtRG~~e~dm~ 69 (138)
|++++.+...++ +..++.+.|.+.||.+....-|... +.+ .+ +.|||+... ..+++|+.
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~~i~ 359 (375)
T 2fnu_A 284 HLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHA----NLNLESVQ 359 (375)
T ss_dssp SCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCT----TCCHHHHH
T ss_pred EEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCC----CCCHHHHH
Confidence 566777765455 7888889999999998833223211 000 11 469998654 34689999
Q ss_pred HHHHHHHHHHH
Q 032537 70 KVAYFFDAAVK 80 (138)
Q Consensus 70 ~IA~lI~~~l~ 80 (138)
.+.+.|.+++.
T Consensus 360 ~~~~~l~~~~~ 370 (375)
T 2fnu_A 360 NIAHSVLKTFE 370 (375)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887764
No 44
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=78.44 E-value=7.9 Score=29.65 Aligned_cols=63 Identities=8% Similarity=0.097 Sum_probs=42.4
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhh-cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~-~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++.+++++.. + ++.++.+.|.+ .||.+..-... .+..++.|||+.. .++|+..+.+.+.+++.
T Consensus 277 ~~~~~~~~~~-~-~~~~l~~~L~~~~gi~v~~g~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 277 TTFFLLRLKK-G-TAAELKKYMLEEYNMLIRDASNF---RGLDESYVRITTQ-------RPAQNQLFIKALETFLE 340 (350)
T ss_dssp SSEEEEEESS-S-CHHHHHHHHHHTTCEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCC-C-CHHHHHHHHHHHCCEEEEeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 3455677654 3 78888888887 99998743221 2223568999843 67888888887777664
No 45
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=77.88 E-value=6.2 Score=32.85 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=53.0
Q ss_pred ceeEEEEeccC-CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhh
Q 032537 5 MILLFAKMFHQ-QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 82 (138)
Q Consensus 5 ~tHlvlvDlr~-~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~ 82 (138)
.+++|.+++.. .+++..++.+.|.+.||.+.....|.... ...-|||+... ..+++|+..+.+-|.+++...
T Consensus 372 ~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~--~~~~lRisv~~----~~t~edid~li~~L~~~l~~l 444 (502)
T 3hbx_A 372 GVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQ--HITVLRVVIRE----DFSRTLAERLVIDIEKVMREL 444 (502)
T ss_dssp SSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCT--TCEEEEEECCT----TCCHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccC--CceEEEEEeCC----CCCHHHHHHHHHHHHHHHHHH
Confidence 35678888764 35788899999999999997766665431 13469998654 445689999888888888654
No 46
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=77.67 E-value=4.1 Score=31.23 Aligned_cols=62 Identities=6% Similarity=-0.064 Sum_probs=40.6
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++++++.. +.+..+..+.|.+.||.+. |+.. .++.|||+....+ +++|++.+.+.|.+++.
T Consensus 297 ~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~~----~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 297 MNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNAV----PIDACIALRELMIQFKE 358 (360)
T ss_dssp SEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCCC----CHHHHHHHHHHHHHHHh
Confidence 477888642 2234455555777999873 3332 1467999987543 47899988888877663
No 47
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=77.60 E-value=5.3 Score=30.65 Aligned_cols=58 Identities=12% Similarity=0.017 Sum_probs=41.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
++++++++.. +.++.+.|.+.||.+..... ++.|||+.... .+++|++++.+.|.+++
T Consensus 338 ~~~~~~~~~~----~~~~~~~l~~~gi~v~~~~~--------~~~~Ri~~~~~----~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 338 LNIVAIEDED----YKEVCKKLRDRGIYVSVCNC--------VKALRIVVMPH----IKREHIDNFIEILNSIK 395 (397)
T ss_dssp SSEEEEECTT----HHHHHHHHHHTTCBCEECSS--------SSEEEEECCTT----CCHHHHHHHHHHHHHHC
T ss_pred ccEEEEEeCC----HHHHHHHHHhCCeEEeccCC--------CCEEEEEEcCC----CCHHHHHHHHHHHHHhh
Confidence 4567777542 67788888888998874321 47899987643 35799998888887765
No 48
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=77.21 E-value=7.8 Score=29.49 Aligned_cols=69 Identities=13% Similarity=0.153 Sum_probs=44.6
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCC--C------C------CCCceeecChhhhhcCCCHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVS--A------M------VPGGIRMGTPALTSRGFVEEDFAKVA 72 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~--~------~------~~sGiRlGT~alTtRG~~e~dm~~IA 72 (138)
|++.+.+. +.++.++.+.|.+.||.+..-...+... + + ..+.|||+.... .+++|++.+.
T Consensus 290 ~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~----~t~e~i~~~~ 363 (382)
T 4hvk_A 290 NNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRLL 363 (382)
T ss_dssp TEEEEEET--TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTT----CCHHHHHHHH
T ss_pred CEEEEEEC--CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCC----CCHHHHHHHH
Confidence 45555553 6789999999999999987422111100 0 0 046799997643 3578999988
Q ss_pred HHHHHHHHh
Q 032537 73 YFFDAAVKL 81 (138)
Q Consensus 73 ~lI~~~l~~ 81 (138)
+.|.+++..
T Consensus 364 ~~l~~~~~~ 372 (382)
T 4hvk_A 364 EVLPGVIER 372 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887753
No 49
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=76.74 E-value=2.6 Score=33.11 Aligned_cols=45 Identities=13% Similarity=0.210 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
++++..++..|++.||.+. +|+||+... +.++|+..+++.|.+++
T Consensus 356 ~~~~~~~~~ll~~~gi~v~-------------~~~Ris~~~-----~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 356 GLKPEQVERLTKEFSIYMT-------------KDGRISVAG-----VASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCCHHHHHHHHHHHCEECC-------------TTCEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEecc-------------CCCeEEecc-----CChhhHHHHHHHHHHHh
Confidence 4578889888999999984 358998754 55677888888887765
No 50
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=76.61 E-value=4.4 Score=32.31 Aligned_cols=68 Identities=12% Similarity=-0.013 Sum_probs=44.2
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.++++++.. ++++.+..+.|.+.||.+..-...+ ..+..++.|||+.... +++|+.+..+.|.+++.
T Consensus 349 g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~-~~~~~~~~iRis~~~~-----~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 349 GLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFK-VYDEPSPSMRLSFCLP-----PDEKIVEGIKRLREVVL 416 (425)
T ss_dssp SSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGC-TTCCCCSEEEEECSSS-----CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhc-CCCCCCCeEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 3467888754 5666666666666699987433221 1111246799986542 68999988888887774
No 51
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=76.16 E-value=4.3 Score=32.08 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=45.4
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++.+++... .+..++.+.|.+.||.+....-|..+ ...+.|||+.+. ..+++|+.++.+.|.+++.
T Consensus 335 ~~~~~~~~~~~-~~~~~~~~~L~~~Gv~v~~~~~~~~~--~~~~~iRi~~~~----~~t~e~i~~~~~~l~~~l~ 402 (409)
T 3kki_A 335 SQIIGLETGDE-RNTEKVRDYLESNGVFGSVFCRPATS--KNKNIIRLSLNS----DVNDEQIAKIIEVCSDAVN 402 (409)
T ss_dssp SSEEEEEEESH-HHHHHHHHHHHHTTEECEEECTTSSC--TTCEEEEEECCT----TCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHCCceEeeeCCCCcC--CCCcEEEEEccC----CCCHHHHHHHHHHHHHHHh
Confidence 45667766432 23455666676779998764444332 234689999765 4567999999998888875
No 52
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=75.96 E-value=4.5 Score=32.36 Aligned_cols=64 Identities=19% Similarity=0.108 Sum_probs=43.6
Q ss_pred eeEEEEeccCCCCCHHHHH-HHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVE-KVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae-~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++. ++++.+.. .++++.||.+..-...+. ..++.|||+. + ..++|+++..+.|.+++.
T Consensus 374 ~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~---~~~~~iRis~---~---~~~e~i~~~l~~l~~~~~ 438 (449)
T 3qgu_A 374 APYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGP---AGEGFVRASA---F---GSRENILEAVRRFKEAYG 438 (449)
T ss_dssp SSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEEC---C---SCHHHHHHHHHHHHHHHC
T ss_pred eeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCC---CCCCeEEEEe---c---CCHHHHHHHHHHHHHHHH
Confidence 456788876 77777655 566778999875433221 1246799983 1 278999888888887774
No 53
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=75.57 E-value=3.1 Score=33.48 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=47.6
Q ss_pred eeEEEEe-------ccCCCCCHHHHHHHH-hhcCceeccc-cC-----C--CCCCCCCCCceeecChhhhhcCCCHHHHH
Q 032537 6 ILLFAKM-------FHQQGIDGSRVEKVL-EAVHIAANKN-TV-----P--GDVSAMVPGGIRMGTPALTSRGFVEEDFA 69 (138)
Q Consensus 6 tHlvlvD-------lr~~gl~G~~ae~~L-e~~gI~vNkn-~i-----P--~d~~~~~~sGiRlGT~alTtRG~~e~dm~ 69 (138)
++.++++ +...++++.+....| .+.||.+... .. | +...+...+.|||..+.. ..+++|+.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~---~~t~e~i~ 428 (467)
T 1ax4_A 352 GHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR---VYTNDHMD 428 (467)
T ss_dssp SSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT---SSCHHHHH
T ss_pred ceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccc---cCCHHHHH
Confidence 5677778 333355677777777 9999998751 11 1 100111235799987743 36789999
Q ss_pred HHHHHHHHHHHh
Q 032537 70 KVAYFFDAAVKL 81 (138)
Q Consensus 70 ~IA~lI~~~l~~ 81 (138)
++.+.|.+++..
T Consensus 429 ~~~~~l~~~~~~ 440 (467)
T 1ax4_A 429 YIADALIGLKEK 440 (467)
T ss_dssp HHHHHHHTTHHH
T ss_pred HHHHHHHHHHHh
Confidence 999998887754
No 54
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=75.43 E-value=11 Score=28.77 Aligned_cols=61 Identities=11% Similarity=0.042 Sum_probs=40.8
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+++++.. .++.+..+.|.+.||.+..-... .+..++.|||+.. .++|++.+.+.+.++.
T Consensus 298 ~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 298 NFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNF---IGLDDSFVRFAIK-------DEKKNTKFLRALKGVE 358 (361)
T ss_dssp SEEEEEESS--SCHHHHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccC---CCCCCCEEEEEcC-------CHHHHHHHHHHHHHHH
Confidence 346677754 67888888888889998632211 1223567999964 6778877777766554
No 55
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=75.36 E-value=8.5 Score=29.84 Aligned_cols=65 Identities=17% Similarity=0.156 Sum_probs=42.4
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhc-CceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~-gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++.+.+ +.++++.+..+.|.+. ||.+..-.-+. .++.+||+....++ .+++++++.+.|.+++
T Consensus 327 ~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~~~~~---~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 327 PTLTTVCI-PDGVDGKAVARRLLNEHNIEVGGGLGEL-----AGKVWRVGLMGFNS---RKESVDQLIPALEQVL 392 (393)
T ss_dssp SSEEEEEC-CTTCCHHHHHHHHHHHHCEECEECCGGG-----TTTEEEEECCGGGC---SHHHHHHHHHHHHHHH
T ss_pred CcEEEEEc-CCCCCHHHHHHHHHhhCCEEEecCcccc-----CCCEEEEeCCccCC---hHHHHHHHHHHHHHHh
Confidence 35667766 3467888887777765 99986432221 24689999543332 4667888888777665
No 56
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=75.28 E-value=12 Score=29.07 Aligned_cols=61 Identities=13% Similarity=0.020 Sum_probs=43.1
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++. +.++.++.+.|.+.||.+..-..++. ++.|||+.. ..++++++..+.|.+++.
T Consensus 334 ~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~------~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 334 FYMFVKAL--EDDSNAFCEKAKEEDVLIVAADGFGC-----PGWVRISYC------VDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp SEEEEECS--SSCHHHHHHHHHTTTEECEESGGGTC-----TTEEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcC--CCCHHHHHHHHHHCCEEEeCccccCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 34677764 33788888899999999874333221 468999852 478888888888777764
No 57
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=75.18 E-value=7.8 Score=29.37 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=42.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
++++.+++.. +..+..+.|.+.||.+....-+ ...+.|||+....+ .++|+..+.+.|.++
T Consensus 300 ~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~-----~~~~~iRis~~~~~----~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 300 MTTIVANTTM---LPGEINKILEPFDMAVGAGYGS-----KKETQIRIANFPAH----SLEQVHKLVQTLKEK 360 (362)
T ss_dssp SSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----GTTTEEEEECCTTS----CHHHHHHHHHHHHHH
T ss_pred CceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCC----CHHHHHHHHHHHHHH
Confidence 4566677654 7888888888889998843222 22467999976643 568888888776654
No 58
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=75.12 E-value=4.6 Score=31.40 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=48.2
Q ss_pred eeEEEEeccC--CCCCHHHHHHHHhhcCceeccccCCC--C--------CCCC------CCCceeecChhhhhcCCCHHH
Q 032537 6 ILLFAKMFHQ--QGIDGSRVEKVLEAVHIAANKNTVPG--D--------VSAM------VPGGIRMGTPALTSRGFVEED 67 (138)
Q Consensus 6 tHlvlvDlr~--~gl~G~~ae~~Le~~gI~vNkn~iP~--d--------~~~~------~~sGiRlGT~alTtRG~~e~d 67 (138)
.|++++++.. .+++..++.+.|.+.||.+..-..|. . ...+ ..+.|||+... ..+++|
T Consensus 296 ~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~~ 371 (393)
T 1mdo_A 296 WHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFP----DMTESD 371 (393)
T ss_dssp CSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCT----TCCHHH
T ss_pred eEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCC----CCCHHH
Confidence 4677888753 15788899999999999987543331 0 0000 12369998654 456899
Q ss_pred HHHHHHHHHHHHH
Q 032537 68 FAKVAYFFDAAVK 80 (138)
Q Consensus 68 m~~IA~lI~~~l~ 80 (138)
+..+.+.|.+++.
T Consensus 372 i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 372 FDRVITALHQIAG 384 (393)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999998888775
No 59
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=75.12 E-value=11 Score=29.88 Aligned_cols=69 Identities=9% Similarity=-0.081 Sum_probs=44.4
Q ss_pred eeEEEEeccCCCCCHHH-HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~-ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++.. +.+..+ +.+.|.+.||.+..-...+.......+.|||+... ..++++++..+.|.+++.
T Consensus 353 g~~~~~~~~~-~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 353 GMFLWIKVKG-INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-----ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp SSEEEEEETT-CSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-----CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCC-CCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 3467788754 335555 68888899999874332221111123579999542 478999888888877764
No 60
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=74.89 E-value=4.8 Score=31.35 Aligned_cols=70 Identities=14% Similarity=0.129 Sum_probs=47.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC--CCC-CCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV--SAM-VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~--~~~-~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
++++++.+. +.+..++.+.|.+.||.+..-..+..+ ..+ .++.|||+.... .+++|+..+.+.|.+++..
T Consensus 340 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~----~~~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 340 AALASFNVA--GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFY----NTKEEIDLFLQSLQATIRF 412 (420)
T ss_dssp CSEEEEEET--TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEC--CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCC----CCHHHHHHHHHHHHHHHHH
Confidence 567777764 467888889999999998643211000 001 146799996643 4789999999988887753
No 61
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=74.82 E-value=11 Score=29.18 Aligned_cols=65 Identities=14% Similarity=0.119 Sum_probs=43.7
Q ss_pred eEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++.+.+. .|+++.++.+.|. +.||.+....- +..++.|||+....+ .+++|+.++.+.|.+++.
T Consensus 316 ~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~---~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 316 TVTGIMIP-KGVDWWKVSQYAMNNFSLEVQGGLG-----PTFGKAWRVGIMGEC---STVQKIQFYLYGFKESLK 381 (396)
T ss_dssp TEEEEECC-TTCCHHHHHHHHHHHHCBCCBCCCG-----GGTTTEEEEECCGGG---CSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcC-CCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEECCCCc---CCHHHHHHHHHHHHHHHH
Confidence 46677763 4778888887775 46999863221 123467999973222 367899998888887775
No 62
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=74.20 E-value=8.6 Score=30.51 Aligned_cols=68 Identities=12% Similarity=0.012 Sum_probs=45.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++.+++++... ++.++.+.|.+.||.+.....-+.. ....++.|||+.... .++++++..+.|.+++.
T Consensus 350 g~~~~~~~~~~--~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-----~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 350 GYFISLDVVPG--TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-----PVEELEVAMDGVATCVL 418 (427)
T ss_dssp SSCEEEECSTT--CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-----CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCcc--hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-----CHHHHHHHHHHHHHHHH
Confidence 34677887642 6888889999999998642111111 112357899986322 57888888888887775
No 63
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=73.85 E-value=8.5 Score=29.98 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=42.4
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++.+.. ++.++.+.|.+.||.+. |+. ++.|||..+.. .+++|++++.+.|.+++
T Consensus 334 g~~~~~~~~~---~~~~l~~~l~~~gi~v~----~~~-----~~~iRi~~~~~----~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 334 GLFIGIELNE---PARPYCEQLKAAGLLCK----ETH-----ENVIRIAPPLV----ISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTEEEEEESS---CSHHHHHHHHTTTEECC----CBT-----TTEEEECCCTT----CCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEcc---hHHHHHHHHHHCCcEEe----cCC-----CCEEEEECCCC----CCHHHHHHHHHHHHHHh
Confidence 4566677654 77888888989999987 222 46799996653 46789988888777665
No 64
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=73.66 E-value=7.1 Score=31.83 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=42.0
Q ss_pred ccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhh
Q 032537 13 FHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 82 (138)
Q Consensus 13 lr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~ 82 (138)
++..++++.++.+.|.+.||.++.... ++++|++.. . .+++|+.++.+.|.+++...
T Consensus 381 ~~~~~~~~~~l~~~L~~~Gi~v~~~~~--------~~~~ri~~~-~----~t~e~i~~~~~~L~~~l~~~ 437 (497)
T 3mc6_A 381 FSSKTLNIHELSDRLSKKGWHFNALQK--------PVALHMAFT-R----LSAHVVDEICDILRTTVQEL 437 (497)
T ss_dssp EECTTTTHHHHHHHHHTTTCBCEECCS--------SCCEEEECC-T----TTTCTHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHhCCEEEecCCC--------CCeEEEEEe-C----CCHHHHHHHHHHHHHHHHHH
Confidence 334578899999999999999874322 347899876 3 35678888888888877643
No 65
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=73.64 E-value=9 Score=29.60 Aligned_cols=67 Identities=10% Similarity=-0.038 Sum_probs=46.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhc-CceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~-gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
.+++.+.+. .++++.+..+.|.+. ||.+..-..| ..++.|||+.... ..+++|+.++.+.|.+++..
T Consensus 303 ~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~~~-----~~~~~lRi~~~~~---~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 303 PTTTAVRTP-DGVDEKALRQAARARYGVVFSSGRGE-----TLGKLTRIGHMGP---TAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGG---GCSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECC-CCCCHHHHHHHHHhcCCEEEecCCCC-----CCCCeEEEeCccc---ccCHHHHHHHHHHHHHHHHH
Confidence 566777763 367888888888775 9998643322 1246899994321 13578999999999888753
No 66
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=73.03 E-value=6.4 Score=30.50 Aligned_cols=63 Identities=16% Similarity=0.093 Sum_probs=40.0
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.++++++.. ++++.+..+.|.+.||.+..-...+.. .++.|||+... .++++.+..+.|.+++
T Consensus 313 ~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~---~~~~~Ris~~~------~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 313 MYLWGRLPE-GVDDLEFGLRLVERGVALAPGRGFGPG---GKGFVRIALVR------PLEELLEAAKRIREAL 375 (376)
T ss_dssp SEEEEECCT-TCCHHHHHHHHHHTTEECEEGGGGCGG---GTTEEEEECCS------CHHHHHHHHHHHHHTC
T ss_pred EEEEEECCC-CCCHHHHHHHHHHCCEEEcCchhhCCC---CCCeEEEEecC------CHHHHHHHHHHHHHHh
Confidence 456778753 667777777776669998743222211 24679999752 5677777776665543
No 67
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=72.88 E-value=5.8 Score=31.00 Aligned_cols=68 Identities=13% Similarity=0.038 Sum_probs=45.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++. .+.+..+....|.+.||.+.....++.+ ...+.|||+.... .+++|+.++.+.|.+++.
T Consensus 323 g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~iRis~~~~----~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 323 SPILPIFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAVP--AEESLIRFSLMAT----HTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp SSEEEEECC-CHHHHHHHHHHHHHTTEECEEECTTTSC--GGGCEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCCC--CCCceEEEEEeCC----CCHHHHHHHHHHHHHHHH
Confidence 467778764 2445666667776679998754433221 1245799997642 578999999988888775
No 68
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=72.78 E-value=10 Score=29.23 Aligned_cols=69 Identities=13% Similarity=0.026 Sum_probs=46.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC---CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~---~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++. +++..++.+.|.+.||.+..-.....+ ....++.|||+.... .+++|++.+.+.|.+++.
T Consensus 332 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~----~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 332 LGVIAFNLG--KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY----NTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp CSEEEEEET--TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEC--CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecC----CCHHHHHHHHHHHHHHHH
Confidence 456777764 567888889999999988632110000 000146799997654 368999999988887764
No 69
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=72.57 E-value=7.1 Score=30.30 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=40.7
Q ss_pred EEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++...|.++.+..+.|. +.||.+..-...+. ++.|||+.. ..++++.+..+.|.+++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~------~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 323 YMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGA-----DDCIRLSYA------TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp EECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTC-----TTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCcEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 455666544678887777775 58999864322111 467999963 368888877777766653
No 70
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=72.27 E-value=10 Score=30.05 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=42.3
Q ss_pred EEEEeccCCCCCHHHHHHHHhh-cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~-~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++. +++..+..+.|.+ .||.+.. + .++.|||+... ..++|+++..+.|.+++.
T Consensus 370 ~~~~~~~--~~~~~~~~~~l~~~~gi~v~~----g-----~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 370 FMAIKVH--DVDPEALRKHLIDKYSIGVIA----L-----NATDIRIAFSC-----VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp EEEEEES--SSCHHHHHHHHHHHHCEECEE----C-----SSSEEEEEGGG-----SCGGGHHHHHHHHHHHHH
T ss_pred EEEeCCC--CCCHHHHHHHHHHhCCEEEec----C-----CCCeEEEEEec-----CCHHHHHHHHHHHHHHHH
Confidence 4677876 6788887777776 9999863 3 24579999653 477889888888877764
No 71
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=71.44 E-value=9.9 Score=29.93 Aligned_cols=66 Identities=9% Similarity=0.063 Sum_probs=43.5
Q ss_pred eeEEEEeccCCCC---CHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGI---DGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl---~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
++++++++. .++ +..+....| ++.||.+..-...+. ..++.|||+... .++++.+..+.|.+++..
T Consensus 328 g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~------~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 328 SMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFGD---YGDDHVRFALIE------NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp SSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS------CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhCC---CCCCeEEEEecC------CHHHHHHHHHHHHHHHHh
Confidence 345777874 355 566666666 668999874332211 124679999763 678888888888887753
No 72
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=71.42 E-value=11 Score=29.19 Aligned_cols=62 Identities=11% Similarity=-0.005 Sum_probs=42.3
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++... + +...|.+.||.+......+.. +..++.|||+... +++|+.+..+.|.+++.
T Consensus 308 ~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~~-~~~~~~iRi~~~~------~~~~i~~~~~~l~~~l~ 369 (381)
T 1v2d_A 308 YFLMAELPGW--D---AFRLVEEARVALIPASAFYLE-DPPKDLFRFAFCK------TEEELHLALERLGRVVN 369 (381)
T ss_dssp SEEEEECTTC--C---HHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECCS------CHHHHHHHHHHHHHHC-
T ss_pred eEEEEecChH--h---HHHHHHhCCEEEecchHhCCC-CCCCCEEEEEeCC------CHHHHHHHHHHHHHHHh
Confidence 4667787543 2 888899999998754322211 1234679999753 78899998888888775
No 73
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=71.42 E-value=9.8 Score=29.57 Aligned_cols=64 Identities=17% Similarity=0.090 Sum_probs=40.7
Q ss_pred eEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.++++++...|+++.+....|. +.||.+..-...+ +..++.|||+... .++++.+..+.|.+++
T Consensus 322 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 322 YLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC------PRSKLEKGVAGLINAI 386 (390)
T ss_dssp SEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred EEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence 3446788655578888877777 7899987432221 1124579999764 2566666666665555
No 74
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=71.30 E-value=13 Score=28.51 Aligned_cols=64 Identities=11% Similarity=0.055 Sum_probs=43.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhh-cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~-~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..+++++. ++.+..+.|.+ .||.+..-...+. .+..++.|||+.. ..++|+.+..+.|.+++.
T Consensus 309 ~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~-~~~~~~~iRis~~------~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 309 SFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGR-NRIGADYVRLALV------YDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp SSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCS-TTTTTTEEEEECC------SCHHHHHHHHHHHHHHHC
T ss_pred ceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCeEEEEEc------CCHHHHHHHHHHHHHHHH
Confidence 456677775 67777777766 9999874333221 1223578999854 178999988888877763
No 75
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=71.27 E-value=8.8 Score=29.53 Aligned_cols=57 Identities=9% Similarity=0.005 Sum_probs=39.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
++++++++.. +..++.+.|.+.||.+... . ++.|||+.+. ..+++|+.++.+.|.++
T Consensus 318 g~~~~~~~~~---~~~~~~~~l~~~gi~~~~~----~-----~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 318 GLMLGLELER---ECKDYVLKALEKGLLINCT----A-----GKVLRFLPPL----IIQKEHIDRAISVLREI 374 (375)
T ss_dssp TTEEEEECSS---CCHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC---cHHHHHHHHHHCCCEEecC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHh
Confidence 3567788753 4566777777799998632 1 4679999763 35688998888777654
No 76
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=71.11 E-value=6.9 Score=30.30 Aligned_cols=68 Identities=15% Similarity=0.070 Sum_probs=45.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++.. +.+..+..+.|.+.||.+.....|.. +...+.|||+.+. ..+++|++++.+.|.+++.
T Consensus 327 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~ 394 (399)
T 3tqx_A 327 HPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSA----VHTQQQLDRAIEAFGQVGK 394 (399)
T ss_dssp SSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCT----TCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeec----CCCHHHHHHHHHHHHHHHH
Confidence 4566776643 23566777777778999874322221 2224579998764 4578999999988888775
No 77
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=69.71 E-value=9.4 Score=29.72 Aligned_cols=64 Identities=17% Similarity=0.103 Sum_probs=41.9
Q ss_pred EEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++...|+++.+..+.| ++.||.+......+ +..++.|||+... .++++.+..+.|.+++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~------~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 327 LQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA------PSSVIQESLERLNKALK 391 (399)
T ss_dssp EEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc------CHHHHHHHHHHHHHHHH
Confidence 34578865567888888877 48999987433221 1124679999763 26777777777666664
No 78
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=69.41 E-value=17 Score=27.94 Aligned_cols=66 Identities=17% Similarity=0.144 Sum_probs=44.6
Q ss_pred eeEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++.+++. .++++.++.+.|. +.||.+..-.-+ ...+.|||+....+ ..++|++.+.+.|.+++.
T Consensus 315 ~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~---~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 315 STVTTIKVP-QGVDWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQN---ATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcC-CCCCHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCc---CCHHHHHHHHHHHHHHHH
Confidence 356677764 3678888877775 569998632211 12467999974432 257889999998888875
No 79
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=69.37 E-value=5.7 Score=31.11 Aligned_cols=68 Identities=7% Similarity=0.032 Sum_probs=43.3
Q ss_pred eeEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++.+++.. +.+..++.+.| ++.||.+..-..|+-+ ...+.|||+.... .+++|++.+.+.|.+++.
T Consensus 330 ~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~~--~~~~~iRis~~~~----~t~~~i~~~~~~l~~~~~ 398 (401)
T 2bwn_A 330 SHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTVP--RGTERLRFTPSPV----HDLKQIDGLVHAMDLLWA 398 (401)
T ss_dssp SSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTSC--TTCCEEEECCCTT----SCHHHHHHHHHHHHHHC-
T ss_pred CCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCCC--CCCceEEEEeeCC----CCHHHHHHHHHHHHHHHH
Confidence 3567787643 34556677677 6889998643322211 1124699997643 368999998888877653
No 80
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=69.30 E-value=7.6 Score=30.55 Aligned_cols=64 Identities=5% Similarity=-0.053 Sum_probs=43.3
Q ss_pred eeEEEEeccC-------CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQ-------QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 6 tHlvlvDlr~-------~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
+.++++++.. .+.+..+....|.+.||.+... .. .++.|||+.+. ..+++|+.+..+.|.++
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~----~~---~~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 352 GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSC----GP---YYNVLRILVPL----TIEDAQIRQGLEIISQC 420 (426)
T ss_dssp TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEE----ST---TSCEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecC----CC---CCCEEEEECCc----cCCHHHHHHHHHHHHHH
Confidence 4567788752 2345666777777789998732 21 14679998653 35789999888888777
Q ss_pred HH
Q 032537 79 VK 80 (138)
Q Consensus 79 l~ 80 (138)
+.
T Consensus 421 l~ 422 (426)
T 1sff_A 421 FD 422 (426)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 81
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=69.21 E-value=16 Score=28.84 Aligned_cols=71 Identities=8% Similarity=0.112 Sum_probs=46.7
Q ss_pred eEEEEeccC---CCCCHHHHHHHHhhc-Cce---eccccCCCCC-CCC-----------------------C-------C
Q 032537 7 LLFAKMFHQ---QGIDGSRVEKVLEAV-HIA---ANKNTVPGDV-SAM-----------------------V-------P 48 (138)
Q Consensus 7 HlvlvDlr~---~gl~G~~ae~~Le~~-gI~---vNkn~iP~d~-~~~-----------------------~-------~ 48 (138)
|++.+++.. .|+++.++.+.|.+. ||. +..-..|... +.+ . .
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 566577653 377888888888887 999 7754433211 100 1 1
Q ss_pred CceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 49 GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 49 sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.|||.....+ -+++|++.+++.|.+++.
T Consensus 384 ~~lrl~~~~~~---gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 384 QSIVIHHAILL---AEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp HEEEEEGGGGG---SCHHHHHHHHHHHHHHHH
T ss_pred CEEEecCCccC---CCHHHHHHHHHHHHHHHH
Confidence 46888865544 168999999998887764
No 82
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=69.05 E-value=15 Score=28.41 Aligned_cols=66 Identities=12% Similarity=-0.046 Sum_probs=41.6
Q ss_pred eeEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCC---CCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGD---VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d---~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
+..+++++.. .+..+....| ++.||.+..-...+. ..+...+.|||+... .++++.+..+.|.+++
T Consensus 326 ~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~------~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 326 SFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA------DVATCVKAAEDIVSLY 395 (396)
T ss_dssp SSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS------CHHHHHHHHHHHHHHC
T ss_pred eEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC------CHHHHHHHHHHHHHHh
Confidence 4567788764 4666665555 788999865332221 112235789998532 6788887777776654
No 83
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=68.14 E-value=24 Score=27.28 Aligned_cols=67 Identities=21% Similarity=0.186 Sum_probs=45.1
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhh-cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~-~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
.+++.+.+. .+.+..++.+.|.+ .||.+.... .+..++.|||+.....+ .+++++++.+.|.+++..
T Consensus 322 ~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~-----~~~~~~~iRi~~~~~~~---~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 322 PVVTCVEIP-GGIDGESVRDMLLAQFGIEIASSF-----GPLAGKIWRIGTMGYSC---RKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCC-----STTTTTEEEEECCGGGC---SHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCCHHHHHHHHHHhCCEEEecCC-----CCCCCCEEEEecccCCC---cHHHHHHHHHHHHHHHHH
Confidence 456666653 36788888887755 599987432 12235689999755443 344599999999888864
No 84
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=68.11 E-value=4.1 Score=31.65 Aligned_cols=65 Identities=8% Similarity=0.023 Sum_probs=42.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
++++++++. .+.+..+..+.|.+.||.+.....|+.+ ...+.+||+... ..+++|++++.+.|.+
T Consensus 318 ~~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~~Ri~~~~----~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 318 SAIQPLIVG-DNSRALQLAEKLRQQGCWVTAIRPPTVP--AGTARLRLTLTA----AHEMQDIDRLLEVLHG 382 (384)
T ss_dssp SSBCCEEEE-SHHHHHHHHHHHHHTTEECCEECTTSSC--TTCEEECCBCCT----TCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeC-CHHHHHHHHHHHHHCCcEEEeecCCCCC--CCCceEEEEEcC----CCCHHHHHHHHHHHHh
Confidence 456667763 2345667777777789998865544322 123679999764 3467888887776654
No 85
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=67.78 E-value=16 Score=28.98 Aligned_cols=67 Identities=15% Similarity=0.071 Sum_probs=44.2
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCC-CCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~-~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++.. + +...+...|.+.||.+.....-+...+ ...+.|||+... ..++++++..+.|.+++.
T Consensus 349 ~~~~~~~~~-~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 349 YFISVDVVP-G-TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-----PPVAELEVAMDGFATCVL 416 (422)
T ss_dssp SCEEEEEST-T-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCC-C-CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-----CCHHHHHHHHHHHHHHHH
Confidence 456778754 2 678888999999999875221111000 124679999653 467888888888877764
No 86
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=67.51 E-value=18 Score=28.17 Aligned_cols=60 Identities=10% Similarity=0.102 Sum_probs=43.1
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++.. +.+..+..+.|.+.||.+... . ++.|||+.+. ..+++|++++.+.|.+++.
T Consensus 336 ~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~----~-----~~~iRis~~~----~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 336 LMIGIQFRE-EVSNREVATKCFENKLLVVPA----G-----NNTIRFLPPL----TVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp TEEEEEECT-TSCHHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECC-hHHHHHHHHHHHHCCCEEccC----C-----CCEEEEECCc----CCCHHHHHHHHHHHHHHHh
Confidence 456777754 346788888888899998632 1 3579999643 4578999988888877663
No 87
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=67.24 E-value=7.2 Score=30.00 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=40.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~ 76 (138)
++++++++. .+++..++.+.|.+.||.+.... .++.|||+.+.. .+++|+.++.+.|.
T Consensus 329 ~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~--------~~~~iRis~~~~----~~~~~i~~~~~~l~ 386 (390)
T 1elu_A 329 AGLVSFTVD-SPLGHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYI----TDEEEINHLLARLA 386 (390)
T ss_dssp SSEEEEEEC-SSSCHHHHHHHHHHTTEECEEET--------TTTEEEEECCTT----CCHHHHHHHHHHHT
T ss_pred ccEEEEEcC-CCCCHHHHHHHHHHCCEEEEecC--------CCCeEEEecccC----CCHHHHHHHHHHHH
Confidence 457777774 46788888889999999986432 246799997443 35788877766553
No 88
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=66.87 E-value=9.1 Score=31.53 Aligned_cols=46 Identities=22% Similarity=0.292 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
|++-.+++ .|++.||.+- ++| ||.-. |+.++.++.+|+-|++|++.
T Consensus 371 gls~e~v~-~L~e~~Vy~~------------~~g-Ris~A-----gl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 371 GLSKAQCE-YCQNHNIFIT------------VSG-RANMA-----GLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp CCCHHHHH-HHHHTTEECC------------TTC-EEEGG-----GCCHHHHHHHHHHHHHHHC-
T ss_pred CcCHHHHH-HHHhCCEEEc------------CCC-EEEec-----cCCHHHHHHHHHHHHHHHHH
Confidence 67777764 6788888642 344 99865 56789999999999999963
No 89
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=65.75 E-value=9.5 Score=29.27 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=39.9
Q ss_pred CCCCCHHHHHHHHhhc-CceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 15 QQGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 15 ~~gl~G~~ae~~Le~~-gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.++++.++.+.|.+. ||.+....- +...+.|||+.+.. .+++|++++.+.|.+++.
T Consensus 315 ~~~~~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~lRis~~~~----~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 315 PTTANAYDIFLKLKDEYGIWICPNGG-----EMKDTIFRVGHIGA----LTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp ESSSCHHHHHHHHHHHSSEECEECCG-----GGTTTCEEEECCSS----CCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEecCCC----CCHHHHHHHHHHHHHHHH
Confidence 3467888877777665 999874311 11245799997653 458999999988888774
No 90
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=65.70 E-value=9.2 Score=29.89 Aligned_cols=57 Identities=21% Similarity=0.109 Sum_probs=36.7
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI 75 (138)
.+++++...|++..+..+.|.+.||.+..-...+ . ++.+||+.. ..++++.+..+.|
T Consensus 322 ~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~---~--~~~iRis~~------~~~~~i~~~l~~l 378 (385)
T 1b5p_A 322 YVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA---A--FGHVRLSYA------TSEENLRKALERF 378 (385)
T ss_dssp EEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT---C--TTEEEEECC------SCHHHHHHHHHHG
T ss_pred EEEEecCCCCCCHHHHHHHHHHCCeEEecccccC---C--CCeEEEEec------CCHHHHHHHHHHH
Confidence 4566776567888888888889999976322111 1 467999953 4566655444443
No 91
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=65.43 E-value=14 Score=32.82 Aligned_cols=54 Identities=11% Similarity=0.065 Sum_probs=41.9
Q ss_pred cCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 14 HQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 14 r~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..|++|.++.+.|.+.||.+++.. ...||+- ++-|-+++|+..+.+.+.++..
T Consensus 511 ~~~g~~~~~l~~~L~e~GI~v~~~~---------~~~ir~~----~s~g~t~e~i~~Ll~aL~~i~~ 564 (730)
T 1c4k_A 511 EDFGVPATIVANYLRDHGIIPEKSD---------LNSILFL----MTPAETPAKMNNLITQLLQLQR 564 (730)
T ss_dssp CSSCCCHHHHHHHHHHTTCCCSEEC---------SSEEEEE----CCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHCCcEEEECC---------CCeEEEE----eCCCCCHHHHHHHHHHHHHHHH
Confidence 4568999999999999999998651 3457753 4567788999998888877664
No 92
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=65.37 E-value=12 Score=29.36 Aligned_cols=64 Identities=11% Similarity=-0.025 Sum_probs=41.2
Q ss_pred EEEEeccCC-CCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQ-GIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~-gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++... +.+..+..+.| ++.||.+......+. ..++.|||+.. ..++++.+..+.|.+++.
T Consensus 336 ~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~lRis~~------~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 336 YIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL------PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp EECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC---CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 344566432 56777777666 589998864322221 12467999974 567888888877777664
No 93
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=64.19 E-value=12 Score=29.72 Aligned_cols=67 Identities=16% Similarity=0.065 Sum_probs=41.4
Q ss_pred eeEEEEeccCCCC-----CH-HHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGI-----DG-SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl-----~G-~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
++++++++....- +. ..+++.+++.||.+..-...+ +..++.+||+.+.+ +++|+.+..+.|.+++
T Consensus 358 g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRi~~~~~-----~~e~i~~~l~~l~~~l 429 (435)
T 3piu_A 358 GLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCH---CTEPGWFRVCFANL-----PERTLDLAMQRLKAFV 429 (435)
T ss_dssp SSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGT---CSSTTEEEEECSSS-----CHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccC---CCCCCEEEEEeeCC-----CHHHHHHHHHHHHHHH
Confidence 3677888764210 22 344555677799987432221 12356799995332 6789988888887777
Q ss_pred H
Q 032537 80 K 80 (138)
Q Consensus 80 ~ 80 (138)
.
T Consensus 430 ~ 430 (435)
T 3piu_A 430 G 430 (435)
T ss_dssp H
T ss_pred H
Confidence 4
No 94
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=64.09 E-value=18 Score=27.20 Aligned_cols=56 Identities=18% Similarity=0.097 Sum_probs=39.0
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++.+. ++.++.+.|.+.||.+..-..++. ++.|||+.. .++|+..+.+.|.+++
T Consensus 279 ~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 279 FVLVENA----AGERTLRFLRERGIQVKDAGQFGL-----HHHIRISIG-------REEDNDRLLAALAEYS 334 (337)
T ss_dssp EEEEECT----TTHHHHHHHHHTTEECEEGGGGTC-----CSEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred EEEEEcC----CHHHHHHHHHHCCeEEEECccCCC-----CCeEEEecC-------CHHHHHHHHHHHHHHh
Confidence 4455532 567888999999999875433322 468999964 4888888887776554
No 95
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=63.98 E-value=21 Score=27.81 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=43.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++.+++. ++.++.+.|.+.||.+... ..+.|||+.+.+ ..+++|+..+.+.|.+++.
T Consensus 342 ~~~~~~~~~----~~~~l~~~l~~~gi~~~~~---------~~~~lRis~~~~---~~t~~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 342 GSHVSFEHP----EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTPL---YTTFTEVWDAVQILGEILD 400 (416)
T ss_dssp CSEEEEECT----THHHHHHHHHTTTEECEEE---------TTTEEEEECCTT---TCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecC----CHHHHHHHHHhCCcEeccC---------CCCeEEEeCccc---CCCHHHHHHHHHHHHHHHh
Confidence 467788765 3777888888889987421 245799997531 2468999999999888875
No 96
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=63.90 E-value=8 Score=30.50 Aligned_cols=60 Identities=12% Similarity=0.100 Sum_probs=38.3
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCC-CCC--------------CceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSA-MVP--------------GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~-~~~--------------sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
|++..++.+.|.+.||.+....-|....| +.. .++|+.+ ....+++|+..+.+.|.+++.
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS----GTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC----CTTCCHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC----CCCCCHHHHHHHHHHHHHHHh
Confidence 45678888999999999875432211111 110 2334433 355789999999998887764
No 97
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=63.48 E-value=15 Score=29.30 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=44.7
Q ss_pred eeEEEEeccC--CCCC-----HHHHHHHH-hhcCceeccccC------C--CCCCCCCCCceeecChhhhhcCCCHHHHH
Q 032537 6 ILLFAKMFHQ--QGID-----GSRVEKVL-EAVHIAANKNTV------P--GDVSAMVPGGIRMGTPALTSRGFVEEDFA 69 (138)
Q Consensus 6 tHlvlvDlr~--~gl~-----G~~ae~~L-e~~gI~vNkn~i------P--~d~~~~~~sGiRlGT~alTtRG~~e~dm~ 69 (138)
++.+++++.. .+++ +..+...| .+.||.+....- | +...+...+.|||..+..+ .+++|+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~---~t~e~i~ 429 (467)
T 2oqx_A 353 GHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRAT---YTQTHMD 429 (467)
T ss_dssp SSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTT---SCHHHHH
T ss_pred ceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCC---CCHHHHH
Confidence 4567777643 2344 44446666 899999874221 1 0001112367999866320 5789999
Q ss_pred HHHHHHHHHHHh
Q 032537 70 KVAYFFDAAVKL 81 (138)
Q Consensus 70 ~IA~lI~~~l~~ 81 (138)
++.+.|.+++..
T Consensus 430 ~~~~~l~~~l~~ 441 (467)
T 2oqx_A 430 FIIEAFKHVKEN 441 (467)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhh
Confidence 999999888864
No 98
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=62.77 E-value=6.1 Score=31.91 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=41.7
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecC-hhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT-~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++. .++.++.+.|.+.||.+.. ..++.|||+- +..+ +++|+..+.+.|.+++.
T Consensus 401 ~~~~~~~~---~~~~~l~~~L~~~Gi~v~~---------~~~~~iRis~~~~~~----t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 401 CQLTITFS---VPNKDVFQELEKRGVVCDK---------RNPNGIRVAPVPLYN----SFHDVYKFTNLLTSILD 459 (465)
T ss_dssp SCEEEEEC---CTTCCHHHHHHTTTEECEE---------ETTTEEEEBCCTTTC----CHHHHHHHHHHHHHHHT
T ss_pred cEEEEEec---CCHHHHHHHHHHCCEEEec---------CCCCEEEEeCcccCC----CHHHHHHHHHHHHHHHH
Confidence 34556654 3567788888888999861 1246899995 5554 47899999988888775
No 99
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=62.24 E-value=6.5 Score=31.30 Aligned_cols=63 Identities=13% Similarity=0.092 Sum_probs=38.5
Q ss_pred CCCHHHHHHHHhhcCceecccc-CCCCCCCCCCCceeecChhhh------------hcCCCHHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNT-VPGDVSAMVPGGIRMGTPALT------------SRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~-iP~d~~~~~~sGiRlGT~alT------------tRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.++.++.+.|.+.||.+.... .|-...+...+ ...+....| -..++++|++.|++.|.+++.
T Consensus 298 ~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 298 EVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRN-YKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp TSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTT-SCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred hhhHHHHHHHHHHCCCceecccCCccccchhhhc-CCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 4568999999999999988754 33322221111 122332222 237889999999988877664
No 100
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=61.57 E-value=28 Score=26.83 Aligned_cols=66 Identities=18% Similarity=0.230 Sum_probs=45.0
Q ss_pred eeEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecC-hhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT-~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
.+++.+.+. .+++..++.+.| ++.||.+....-+ ...+.|||+. +..+ .++|+.++.+.|.+++..
T Consensus 322 ~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~----~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 322 NNVLGVVIP-QGINGDQARKLMLEDFGIEIGTSFGP-----LHGKVWRIGTMGYNA----RKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp SSEEEEECC-TTCCHHHHHHHHHHHHSEEEEECCGG-----GTTTEEEEECCGGGC----SHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECC-CCCCHHHHHHHHHHhcCeEEeCccCC-----CCCCEEEEeCccCcC----CHHHHHHHHHHHHHHHHH
Confidence 456666653 367888877766 5569998743211 1245799996 4443 478999999999888863
No 101
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=61.48 E-value=6.1 Score=30.87 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=43.7
Q ss_pred eEEEEeccC-CCCCHHHHHHHHhhcCceeccccCCCCCCC-C--------------CCCceeecChhhhhcCCCHHHHHH
Q 032537 7 LLFAKMFHQ-QGIDGSRVEKVLEAVHIAANKNTVPGDVSA-M--------------VPGGIRMGTPALTSRGFVEEDFAK 70 (138)
Q Consensus 7 HlvlvDlr~-~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~-~--------------~~sGiRlGT~alTtRG~~e~dm~~ 70 (138)
|++.+.+.. .+++..++.+.|.+.||.+..-..|....+ + ....|||... ..++++|+..
T Consensus 306 ~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~----~~~t~edi~~ 381 (391)
T 3dr4_A 306 WMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH----AGLTEADIDR 381 (391)
T ss_dssp SSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC----TTCCHHHHHH
T ss_pred EEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC----CCCCHHHHHH
Confidence 555665543 377899999999999999884433322111 1 1234555433 3567899999
Q ss_pred HHHHHHHHH
Q 032537 71 VAYFFDAAV 79 (138)
Q Consensus 71 IA~lI~~~l 79 (138)
+++.|.+++
T Consensus 382 ~~~~l~~~l 390 (391)
T 3dr4_A 382 VIAALDQVL 390 (391)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHh
Confidence 998876543
No 102
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=61.01 E-value=30 Score=27.93 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=43.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+++++.. +++..+....|.+.||.+..-...+ .....++.|||+.... .++|+.+..+.|.+++.
T Consensus 377 ~~~~v~~~~-~~~~~~l~~~l~~~gV~v~pg~~f~-~~~~~~~~iRls~~~~-----~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 377 MFIWVTLPD-GIDSKKMLERAIKKGVAYVPGEAFY-AHRDVKNTMRLNFTYV-----DEDKIMEGIKRLAETIK 443 (448)
T ss_dssp SEEEEECST-TCCHHHHHHHHHHTTEECEEGGGGS-TTCCCCSEEEEECSSS-----CTHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCC-CCCHHHHHHHHHHCCcEEEcchhhc-CCCCCCCEEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 456788743 6778777777766799986422111 1111246799996532 67899888888877764
No 103
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=59.71 E-value=18 Score=29.56 Aligned_cols=65 Identities=15% Similarity=0.122 Sum_probs=44.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
|.+++++ +.+++..++.+.|.+.||.+.....| ....+.|||..... .+++|+.++.+.|.+++.
T Consensus 375 ~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~----~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 375 HEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTET----EAKETLEAFAEAMGALLK 439 (474)
T ss_dssp SCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTT----SCHHHHHHHHHHHHHHHT
T ss_pred eEEEEEc-CCCCCHHHHHHHHHHCCccccccccc----cccCCEEEEEeecC----CCHHHHHHHHHHHHHHHH
Confidence 4467787 55778888888888889985322111 11246799986543 356899888888877764
No 104
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=59.68 E-value=15 Score=28.38 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=35.8
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccc-cCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKN-TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn-~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~ 76 (138)
..+++++. ++.+..+.|.+.||.+... ..++ .++.|||+.. .++|+.++.+.+.
T Consensus 298 ~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~-----~~~~iRis~~-------~~~e~~~~~~~l~ 352 (356)
T 1fg7_A 298 NYILARFK----ASSAVFKSLWDQGIILRDQNKQPS-----LSGCLRITVG-------TREESQRVIDALR 352 (356)
T ss_dssp SEEEEEET----THHHHHHHHHHTTEECEECTTSTT-----CTTEEEEECC-------CHHHHHHHHHHHH
T ss_pred eEEEEECC----CHHHHHHHHHHCCEEEEECCCCCC-----CCCeEEEEeC-------CHHHHHHHHHHHH
Confidence 45677764 6788888889999998752 1121 1357999964 3677766665443
No 105
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=59.61 E-value=25 Score=27.36 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=39.0
Q ss_pred eEEEEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+++++. .++.+..+.| ++.||.+......+. ++.|||+... .++++.+..+.|.+++
T Consensus 327 ~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~-----~~~~Ris~~~------~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 327 FYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLK-----PGFVRLSFAT------SIERLTEALDRIEDFL 386 (389)
T ss_dssp SEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEECCS------CHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCC-----CCeEEEEEeC------CHHHHHHHHHHHHHHH
Confidence 35566765 4677777777 489999864322221 3579999762 6778877777766655
No 106
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=59.44 E-value=28 Score=27.73 Aligned_cols=61 Identities=13% Similarity=0.043 Sum_probs=42.9
Q ss_pred eEEEEeccCC-CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQ-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~-gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++... +.+..++.+.|.+.||.+... . ++.|||..+. ..+++|+.++.+.|.+++.
T Consensus 355 ~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~----~-----~~~iRl~~~~----~~t~eei~~~~~~l~~~l~ 416 (420)
T 2pb2_A 355 LLIGAELKPKYKGRARDFLYAGAEAGVMVLNA----G-----ADVMRFAPSL----VVEEADIHEGMQRFAQAVG 416 (420)
T ss_dssp TEEEEEECGGGTTCHHHHHHHHHHTTEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCchHHHHHHHHHHHHCCCEEEeC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 4567776532 235777778888899998742 1 3579999653 4678999999888887774
No 107
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=58.78 E-value=18 Score=28.77 Aligned_cols=70 Identities=16% Similarity=0.040 Sum_probs=47.3
Q ss_pred ceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 5 MILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 5 ~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
.++++.+++.. +.+..++.+.|.+.||.+.....|+-+ ...+.|||+... ..+++|+..+.+.|.+++..
T Consensus 345 ~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~~--~~~~~lRi~~~~----~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 345 DSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPATP--AGTFLLRCSICA----EHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp CSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTSC--TTCEEEEEECCT----TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCCC--CCCeEEEEEeCC----CCCHHHHHHHHHHHHHHHHH
Confidence 35677887642 234566667777779998865544322 123579998764 35789999999999888753
No 108
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=58.09 E-value=35 Score=27.37 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=43.1
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++...+.+..++.+.|.+.||.+... ..+.|||..+. ..+++|+.++.+.|.+++.
T Consensus 367 ~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 367 LLCAIEFKNELVNVLDICLKLKENGLITRDV---------HDKTIRLTPPL----CITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp TEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------TTTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEccChhHHHHHHHHHHHCCeEEecC---------CCCEEEEECCc----CCCHHHHHHHHHHHHHHHH
Confidence 4677777543245777888888889998732 13579996543 4578999999888887774
No 109
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=57.57 E-value=11 Score=29.62 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
+++...++..|++.||.+.. |+||+... ..++|++.+.+.|.+++
T Consensus 364 ~~~~~~~~~ll~~~gv~v~p-------------~~Ri~~~~-----~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 364 GLTREQVELLRSEYHIYMTL-------------NGRAAVSG-----LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TCEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCEEEcC-------------CCEEEEEe-----cCHhhHHHHHHHHHHHh
Confidence 45678889999999999762 35887643 45678888888777665
No 110
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=57.19 E-value=23 Score=27.78 Aligned_cols=47 Identities=21% Similarity=0.231 Sum_probs=36.7
Q ss_pred CHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..++.+.|.+.||.+.. + +++|||+. + +..++++++..+.|.+++.
T Consensus 367 ~~~~~~~~l~~~gi~v~~----g------~~~iRis~---~--~~~~~~i~~~~~~l~~~l~ 413 (418)
T 3rq1_A 367 SANAICEELKKEHIYVIA----L------ANGIRIAA---C--GIPKCQMTGLAEKIYNAMK 413 (418)
T ss_dssp THHHHHHHHHHTTEECEE----C------SSEEEEEG---G--GSCHHHHTTHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEEec----C------CCCeEEEE---e--cCCHHHHHHHHHHHHHHHH
Confidence 678888899999999863 3 35799982 2 3578999999988888775
No 111
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=56.57 E-value=19 Score=27.20 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=37.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++. .+..+.|.+.||.+..-. +. .+.+||+.+ ...+++|++++.+.|.+++.
T Consensus 294 ~~~~~~~~~------~~~~~~l~~~gi~v~~g~--~~-----~~~iRi~~~----~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 294 ANILFCRLD------SAMIDALLKAGFGFYHDR--WG-----PNVVRFVTS----FATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp SSEEEEEEC------HHHHHHHHHTTCBCBCSS--SS-----TTEEEEECC----TTCCHHHHHHHHHHHHHTC-
T ss_pred ccEEEEEcC------HHHHHHHHhcCeEEeccc--cC-----CCeEEEEec----CCCCHHHHHHHHHHHHHHHH
Confidence 455667653 256666778899887322 11 457999843 33567899888888777664
No 112
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=56.44 E-value=6.3 Score=30.98 Aligned_cols=54 Identities=11% Similarity=-0.087 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCceeccccCCCCC--CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 21 SRVEKVLEAVHIAANKNTVPGDV--SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 21 ~~ae~~Le~~gI~vNkn~iP~d~--~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..++..|++.||.+..-...+.. .+...+.|||+.. ..++++++..+.|.+++.
T Consensus 365 ~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 365 RFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV------KDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp HHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHh
Confidence 44566788899998753221111 1223567999832 288999888888877663
No 113
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=56.29 E-value=42 Score=26.94 Aligned_cols=61 Identities=18% Similarity=0.170 Sum_probs=43.0
Q ss_pred eEEEEeccCC-CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQ-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~-gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++... +.+..++.+.|.+.||.+.. . .++.|||..+. ..+++|+.++.+.|.+++.
T Consensus 376 ~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~----~-----~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 376 LLNAIVIKETKDWDAWKVCLRLRDNGLLAKP----T-----HGDIIRFAPPL----VIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TEEEEEECCCSSCCHHHHHHHHHHTTEECCB----S-----SSSEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCccHHHHHHHHHHHHCCeEEec----C-----CCCEEEEECcc----CCCHHHHHHHHHHHHHHHH
Confidence 4567776542 14677788888888999873 2 13579997543 4678999999888887764
No 114
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=55.35 E-value=25 Score=27.26 Aligned_cols=57 Identities=21% Similarity=0.214 Sum_probs=39.8
Q ss_pred eEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
+++++++.. ++.+..+.|. +.||.+... .++.|||+.+. ..+++|+.++.+.|.+++
T Consensus 337 ~~~~~~~~~---~~~~l~~~l~~~~gi~v~~~---------~~~~iRi~~~~----~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 337 LMVGLELKE---KAAPYIARLEKEHRVLALQA---------GPTVIRFLPPL----VIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TEEEEEESS---CSHHHHHHHHHHHCEECEES---------STTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcC---hHHHHHHHHHHHCCeEEecC---------CCCEEEEeCCC----CCCHHHHHHHHHHHHHHh
Confidence 567777753 2566666676 889998742 14579998643 457889988888777665
No 115
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=54.96 E-value=19 Score=27.65 Aligned_cols=61 Identities=13% Similarity=0.003 Sum_probs=38.9
Q ss_pred eEEEEeccCCCCCHHHHHHHHh-hcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le-~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+++++.. +..+..+.|. +.||.+..-...+. ..++.+||+.. ..++++.+..+.|.+++
T Consensus 307 ~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~~Ri~~~------~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 307 YYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGS---KGKNYIRISYA------NSYENIKEGLERIKEFL 368 (370)
T ss_dssp TEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCG---GGSSBEEEECC------SCHHHHHHHHHHHHHHH
T ss_pred eEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEEe------CCHHHHHHHHHHHHHHH
Confidence 345567654 6777777774 88999874322221 12457999977 36678877777776655
No 116
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=54.12 E-value=49 Score=25.51 Aligned_cols=61 Identities=13% Similarity=0.141 Sum_probs=42.3
Q ss_pred eEEEEeccCC-CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQ-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~-gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++.+++... ..++.+..+.|.+.||.+... . ++.|||+.+. ..+++|++++.+.|.+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~----~-----~~~iRi~~~~----~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 337 LLIGCVLNADYAGQAKQISQEAAKAGVMVLIA----G-----GNVVRFAPAL----NVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp TEEEEEECTTTTTCHHHHHHHHHHTTEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHHHCCcEEeec----C-----CCeEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 4555665431 126788888888889998742 1 4679997554 3568999999888888775
No 117
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=54.08 E-value=51 Score=25.04 Aligned_cols=66 Identities=14% Similarity=0.124 Sum_probs=42.9
Q ss_pred eEEEEeccCCCCCHHHHHHHHhh-cCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~-~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
+++.+.+. .+++..+..+.|.+ +||.+....-+ ...+.|||+....+ .+++|++++.+.|.+++..
T Consensus 321 ~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~---~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 321 TITTVTVP-AGYNWRDIVSYVLDHFSIEISGGLGP-----TEERVLRIGLLGYN---ATTENVDRVAEALREALQH 387 (393)
T ss_dssp SEEEEECC-TTBCHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGG---CCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCC-CCCCHHHHHHHHHHhCCEEEeCCccc-----CCCCEEEEEecccC---CCHHHHHHHHHHHHHHHHh
Confidence 44455543 36778777777655 59998743322 22457999962221 2578999999988888753
No 118
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=53.59 E-value=18 Score=27.74 Aligned_cols=58 Identities=10% Similarity=0.011 Sum_probs=38.2
Q ss_pred CHHHHHHHHhhcCceecccc-CCCCCC-CCC----------------CCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNT-VPGDVS-AMV----------------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~-iP~d~~-~~~----------------~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..++.+.|.+.||.+..-. .|.... ++. .+.|||.... ..+++|++.+.+.|.+++.
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~----~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHP----YLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCT----TSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCC----CCCHHHHHHHHHHHHHHHH
Confidence 67888999999999887532 111111 111 1456665444 3468999999999988875
No 119
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=53.57 E-value=23 Score=28.30 Aligned_cols=60 Identities=12% Similarity=0.149 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCC-CCC-CC-----------------CCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGD-VSA-MV-----------------PGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d-~~~-~~-----------------~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
|+++.++.+.|.+.||.+....-|.- ..| +. .+.|||+. ...++++|+..+++.|.+
T Consensus 356 ~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~----~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 356 GVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGI----YPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp SSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECC----STTCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecC----CCCCCHHHHHHHHHHHHH
Confidence 67899999999999999875432210 001 00 12367753 456789999999998877
Q ss_pred HHH
Q 032537 78 AVK 80 (138)
Q Consensus 78 ~l~ 80 (138)
++.
T Consensus 432 ~~~ 434 (437)
T 3bb8_A 432 FFG 434 (437)
T ss_dssp HTT
T ss_pred HHc
Confidence 663
No 120
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=52.83 E-value=24 Score=27.68 Aligned_cols=68 Identities=12% Similarity=-0.005 Sum_probs=41.1
Q ss_pred eEEEEeccCC-CCCHHHHHHHH-hhcCceeccccCCCCCC--------CCCCCceeecChhhhhcCCCHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQ-GIDGSRVEKVL-EAVHIAANKNTVPGDVS--------AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76 (138)
Q Consensus 7 HlvlvDlr~~-gl~G~~ae~~L-e~~gI~vNkn~iP~d~~--------~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~ 76 (138)
.++++++... +.++.+....| ++.||.+.......... +..++.|||+.. ..++|+.+..+.|.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~------~~~e~i~~~~~~l~ 390 (411)
T 2o0r_A 317 YFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC------KRDDTLDEAIRRLS 390 (411)
T ss_dssp SEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC------SCHHHHHHHHHHHG
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec------CCHHHHHHHHHHHH
Confidence 4677787653 25677776655 67899986432210100 112456999963 26788888877776
Q ss_pred HHHH
Q 032537 77 AAVK 80 (138)
Q Consensus 77 ~~l~ 80 (138)
+++.
T Consensus 391 ~~~~ 394 (411)
T 2o0r_A 391 VLAE 394 (411)
T ss_dssp GGGC
T ss_pred HHHh
Confidence 6553
No 121
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=52.77 E-value=28 Score=27.41 Aligned_cols=66 Identities=11% Similarity=-0.014 Sum_probs=40.9
Q ss_pred eEEEEeccCCC-----CCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQG-----IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~g-----l~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++++++.... .++.+..+.| ++.||.+......+.. .++.|||+... .+++|+++..+.|.+++.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~---~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 354 LFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ---EPGWFRVCFAN-----MDDGTVDIALARIRRFVG 425 (428)
T ss_dssp SEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS---SSSEEEEECSS-----SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEEec-----CCHHHHHHHHHHHHHHHh
Confidence 45678875421 1233444444 5569998753322111 14579999752 578999999888887774
No 122
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=52.67 E-value=41 Score=26.95 Aligned_cols=69 Identities=12% Similarity=-0.049 Sum_probs=46.4
Q ss_pred eeEEEEeccCC---CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQ---GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~---gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++|.+.+.+. +++..++.+.|.+.||.+.....|.... ....|||.....+ +++|+..+.+.|.+++.
T Consensus 361 ~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRis~~~~~----t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 361 IPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEAT--DIVVMRIMCRRGF----EMDFAELLLEDYKASLK 432 (452)
T ss_dssp SSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCT--TCEEEEEECCTTC----CHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccC--CeEEEEEEecCCC----CHHHHHHHHHHHHHHHH
Confidence 46777776542 3577889999999999876544443321 1346999976655 46888888877776664
No 123
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=51.67 E-value=16 Score=28.88 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
+++...+...|++.||.+.. + .||+.. ++.+++++++.+.|.+++
T Consensus 375 ~~~~~~~~~~l~~~gI~v~~------------~-~Ris~~-----~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 375 GLTSAQVDRLREEFGIYAVS------------T-GRICVA-----ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCCHHHHHHHHHHHCEECCT------------T-SEEEGG-----GCCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecC------------C-CeEEEe-----cCCHHHHHHHHHHHHHHh
Confidence 45788899999999999872 2 499753 356788988888887765
No 124
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=50.78 E-value=27 Score=27.47 Aligned_cols=68 Identities=10% Similarity=-0.016 Sum_probs=41.4
Q ss_pred eeEEEEeccCCC-----------CCHHHHHHHH-hhcCceeccccCCCCCC--CCCCCceeecChhhhhcCCCHHHHHHH
Q 032537 6 ILLFAKMFHQQG-----------IDGSRVEKVL-EAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSRGFVEEDFAKV 71 (138)
Q Consensus 6 tHlvlvDlr~~g-----------l~G~~ae~~L-e~~gI~vNkn~iP~d~~--~~~~sGiRlGT~alTtRG~~e~dm~~I 71 (138)
+.++++++...+ .+..+....| ++.||.+......+... ...++.|||+.+ ..++|+++.
T Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~------~~~e~i~~~ 418 (429)
T 1yiz_A 345 GYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF------KKDENLQKA 418 (429)
T ss_dssp SSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC------SCHHHHHHH
T ss_pred ceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec------CCHHHHHHH
Confidence 456778876431 3555555544 68999986432111100 012467999975 278889888
Q ss_pred HHHHHHHH
Q 032537 72 AYFFDAAV 79 (138)
Q Consensus 72 A~lI~~~l 79 (138)
.+.|.+++
T Consensus 419 l~~l~~~l 426 (429)
T 1yiz_A 419 AEILRKWK 426 (429)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 88877765
No 125
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=50.36 E-value=11 Score=28.75 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=31.7
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI 75 (138)
.+++++.. .++.+..+.|.+.||.+.. .++.|||+.. .++|++++.+.|
T Consensus 283 ~~~~~~~~--~~~~~~~~~l~~~gi~v~~----------~~~~iRis~~-------~~~~i~~~~~~l 331 (335)
T 1uu1_A 283 FVFVFMEK--EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILREL 331 (335)
T ss_dssp EEEEECCT--HHHHHHHHHHHHHTEEEEE----------ETTEEEEECC-------CHHHHHHHHHHH
T ss_pred EEEEECCC--CCHHHHHHHHHHCCEEEEE----------CCCeEEEEeC-------CHHHHHHHHHHH
Confidence 46677653 4566777778888999875 1357999962 145565554443
No 126
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=50.00 E-value=21 Score=25.79 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=30.0
Q ss_pred ceeecChhhhhcCCCHHHHHHHHHHHHHHHHhhhhhhhccccchhhhhHhhhhccccHHHHHHHHHHHHHHHhhCCC-CC
Q 032537 50 GIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSETQGTKLKDFVATTQSANFQSEIAKRCHDVEEYAKQFPT-IG 128 (138)
Q Consensus 50 GiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~~~~~~~~~g~~~~df~~~~~~~~~~~~~~~ir~~V~~l~~~fp~-~~ 128 (138)
.|+|- |++ +.++|.+.+.++|..|++-+.+ ..-+..+++...++..+++ |+
T Consensus 90 ~I~Id-p~l----ldpeD~E~LeDLI~aAvNdA~~-----------------------ka~e~~~e~M~~ltgGl~lpPG 141 (143)
T 1ybx_A 90 EITIK-PEV----VDPDDVEMLQDLILAAVNEALR-----------------------KADEMVTAEISKITGGLGGIPG 141 (143)
T ss_dssp EEEEC-GGG----CCTTCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHC--------
T ss_pred EEEEC-HHH----cCCcCHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHhCCCCCCCC
Confidence 46664 333 4678999999999999975421 1224566778888888877 55
No 127
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=49.92 E-value=22 Score=27.78 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++...+...|++.||.+.. .+||+... .+++|++.+.+.|.+++.
T Consensus 364 ~~~~~~~~~~l~~~gi~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 364 GLTPQMVKRLEETHAVYLVA-------------SGRASIAG-----LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecc-------------CcEEEEcc-----CCHhHHHHHHHHHHHHHH
Confidence 45677888889999999872 48998642 468899888888777663
No 128
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=49.48 E-value=33 Score=26.04 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=37.6
Q ss_pred HHHHHHHhhcCceeccccCCCCCCCCCCCceeec--ChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 21 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG--TPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 21 ~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlG--T~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
..+...+. .||.||.-.-|-..+...||=+|-| +.+++|-|-.+.=-+.|-+-|...|
T Consensus 106 ~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~l 165 (223)
T 3dfz_A 106 KFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNY 165 (223)
T ss_dssp HHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHc
Confidence 34444555 8999998888877766677777776 5678899988876666666665554
No 129
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=49.40 E-value=22 Score=28.25 Aligned_cols=73 Identities=7% Similarity=-0.053 Sum_probs=43.8
Q ss_pred eeEEEEeccC--CCCCHHHH-----HHHH-hhcCceecccc---CCCCC-----CCCCCCceeecChhhhhcCCCHHHHH
Q 032537 6 ILLFAKMFHQ--QGIDGSRV-----EKVL-EAVHIAANKNT---VPGDV-----SAMVPGGIRMGTPALTSRGFVEEDFA 69 (138)
Q Consensus 6 tHlvlvDlr~--~gl~G~~a-----e~~L-e~~gI~vNkn~---iP~d~-----~~~~~sGiRlGT~alTtRG~~e~dm~ 69 (138)
++.+++++.. .+++..+. ...| ++.||.+.... .|..+ .....+.|||+.+. -..+++|++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~---~~~t~e~i~ 418 (456)
T 2ez2_A 342 GHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPR---RVYTYAHMD 418 (456)
T ss_dssp SSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCT---TTCCHHHHH
T ss_pred ceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCC---CCCCHHHHH
Confidence 5677777642 34454443 4444 78898753211 12111 11123579999765 136889999
Q ss_pred HHHHHHHHHHHh
Q 032537 70 KVAYFFDAAVKL 81 (138)
Q Consensus 70 ~IA~lI~~~l~~ 81 (138)
++.+.|.+++..
T Consensus 419 ~~~~~l~~~l~~ 430 (456)
T 2ez2_A 419 VVADGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 999999888864
No 130
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=48.91 E-value=31 Score=26.39 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=38.2
Q ss_pred EEEEeccCCCCCHHHHHHH-HhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~-Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++. .+.+..+.... |++.||.+..-..++. ++.+||+.. ..++++.+..+.|.+++.
T Consensus 308 ~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~------~~~~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 308 TSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFER-----DGYVRLGFA------CEQETLIKGLEKLSQFLR 369 (375)
T ss_dssp CEEEEEC-CSSCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEECCC------SCHHHHHHHHHHHHHHHG
T ss_pred EEeEEcC-CCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 3445543 35566665555 4899999864333222 568999843 234778777777777764
No 131
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=48.55 E-value=19 Score=27.82 Aligned_cols=44 Identities=23% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
++++..+...|++.||.+.. +| ||+... +.++|+++..+.|.++
T Consensus 353 ~~~~~~~~~~l~~~gi~v~~------------g~-Ris~~~-----~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 353 GLSAAQVDRLREEFGVYLIA------------SG-RMCVAG-----LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCCHHHHHHHHHTTCEECCT------------TC-EEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEECC------------CC-eEEEEe-----cCHhhHHHHHHHHHhh
Confidence 35788899999999999862 23 987543 3457788777776654
No 132
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=47.98 E-value=61 Score=25.15 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=34.1
Q ss_pred CCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 18 IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 18 l~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+..+....| ++.||.+......+ .++.|||+. +..++++.+..+.|.+++.
T Consensus 359 ~~~~~~~~~l~~~~gi~v~~g~~f~-----~~~~iRis~------~~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 359 KTDVEFFEKLLEEENVQVLPGTIFH-----APGFTRLTT------TRPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp CSHHHHHHHHHHHHCEECEEGGGGT-----CTTEEEEEC------CSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEecccccC-----CCCeEEEEe------cCCHHHHHHHHHHHHHHHH
Confidence 4666665555 78999987433222 145799997 2467787777777766664
No 133
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=47.02 E-value=53 Score=24.85 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=42.9
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC--CC-------C-----CCCceeecChhhhhcCCCHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV--SA-------M-----VPGGIRMGTPALTSRGFVEEDFAKVAY 73 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~--~~-------~-----~~sGiRlGT~alTtRG~~e~dm~~IA~ 73 (138)
.+.+.+. ++++.++.+.|.+.||.+..-...+.. .+ . ..+.|||+.... .+++|+.++.+
T Consensus 294 ~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~~~ 367 (384)
T 1eg5_A 294 TLSVSFP--NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKY----NTEEEVDYFLK 367 (384)
T ss_dssp EEEEECT--TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTT----CCHHHHHHHHH
T ss_pred EEEEEeC--CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCC----CCHHHHHHHHH
Confidence 4444443 568888999999999998742110000 00 0 125799996442 46899999999
Q ss_pred HHHHHHHh
Q 032537 74 FFDAAVKL 81 (138)
Q Consensus 74 lI~~~l~~ 81 (138)
.|.+++..
T Consensus 368 ~l~~~~~~ 375 (384)
T 1eg5_A 368 KIEEILSF 375 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888753
No 134
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=45.98 E-value=66 Score=25.42 Aligned_cols=53 Identities=9% Similarity=-0.026 Sum_probs=35.6
Q ss_pred CCCHHHHH-HHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVE-KVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 17 gl~G~~ae-~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.+..+.. +.+++.||.+.....++. ++.+||+. +..++++.+..+.|.+++.
T Consensus 369 ~~~~~~~~~~l~~~~gV~v~~g~~~~~-----~~~iRis~------~~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 369 FENDVEFTERLVAEQSVHCLPATCFEY-----PNFIRVVI------TVPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp CSSHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEES------CSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCEEEECCcccCC-----CCeEEEEE------CCCHHHHHHHHHHHHHHHH
Confidence 34555554 445789999875433322 46799994 2568888888888877774
No 135
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=45.97 E-value=9.1 Score=29.25 Aligned_cols=67 Identities=13% Similarity=0.110 Sum_probs=43.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCcee-ecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIR-MGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiR-lGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++++++++. +..++.+.|.+.||.+.. ..+.-. ....++.|| |+.... ..+++|+..+.+.|.+++.
T Consensus 300 ~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~---~~~~~~i~~~~~~l~~~~~ 368 (371)
T 2e7j_A 300 HDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTY---GLSDEEVDYVLNAFKEIIE 368 (371)
T ss_dssp SSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECT---TCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeecc---CCCHHHHHHHHHHHHHHHH
Confidence 567888875 567777888888999864 211110 011146799 886532 2468999999888877764
No 136
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=45.77 E-value=57 Score=25.63 Aligned_cols=59 Identities=8% Similarity=0.050 Sum_probs=42.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++++++.. +++..+....|.+.||.+.. + .+.|||..+.. .+++|++++.+.|.+++.
T Consensus 364 ~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~----~------~~~iRis~~~~----~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 364 AIGVVETTH-PVNMAALQKFFVEQGVWIRP----F------GKLIYLMPPYI----ILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp TEEEEEESS-CBCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT----CCHHHHHHHHHHHHHHTS
T ss_pred EEEEEEECC-cccHHHHHHHHHHCCCEEec----c------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 356778753 35777888888888999863 1 24699985544 467899988888877764
No 137
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=45.34 E-value=29 Score=27.06 Aligned_cols=65 Identities=17% Similarity=0.051 Sum_probs=37.5
Q ss_pred eeEEEEe-ccCCCCCHHH-HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKM-FHQQGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvD-lr~~gl~G~~-ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..++++ +. .+++..+ ++..+++.||.+..-...+ . ..++.|||+. ...++++.+..+.|.+++.
T Consensus 325 ~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~g~~f~-~--~~~~~iRis~------~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 325 APYLWVKPTQ-ANISDRDLFDFFLREYHIAITPGIGFG-R--SGSGFVRFSS------LGKREDILAACERLQMAPA 391 (400)
T ss_dssp SSEEEEECCC-TTCCTTTHHHHHHHHHSEECEEGGGGC-G--GGTTCEEEEC------CSCHHHHHHHHHHHHC---
T ss_pred ceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeChhHhC-C--CCCCEEEEEe------eCCHHHHHHHHHHHHHHHH
Confidence 3457788 53 3556544 4555677899987432211 1 1135699983 2357888877777666653
No 138
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=45.30 E-value=31 Score=27.11 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=38.6
Q ss_pred EEEEeccCCCCCHHHHHHH-HhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~-Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++. .++++.+.... +++.||.+..-...+. ..++.|||+... .++++.+..+.|.+++
T Consensus 338 ~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~------~~e~l~~~l~~l~~~l 400 (404)
T 2o1b_A 338 YVWLETP-PGYDSEQFEQFLVQEKSILVAPGKPFGE---NGNRYVRISLAL------DDQKLDEAAIRLTELA 400 (404)
T ss_dssp EEEEECC-TTCCHHHHHHHHHHHHCEECEESGGGCG---GGTTEEEEECCS------CTTHHHHHHHHHHGGG
T ss_pred EEEEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhCc---CCCCeEEEEEcC------CHHHHHHHHHHHHHHH
Confidence 4677875 36677776555 4578999864322211 124679999763 4667777766665554
No 139
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=45.24 E-value=47 Score=26.08 Aligned_cols=59 Identities=15% Similarity=0.093 Sum_probs=35.9
Q ss_pred eeEEEEeccCCCCCHHH-HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~-ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI 75 (138)
+..+++++. +.+..+ ++..|++.||.+..-..++. ..++.|||+. +..++++.+..+.|
T Consensus 362 ~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~~---~~~~~iRis~------~~~~e~l~~~l~rl 421 (432)
T 3ei9_A 362 APYVWVHFP--NQSSWDVFAEILEKTHVVTTPGSGFGP---GGEGFVRVSA------FGHRENILEACRRF 421 (432)
T ss_dssp SSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEEC------CSCHHHHHHHHHHH
T ss_pred ceEEEEECC--CCCHHHHHHHHHHHCCEEEeCchHhCC---CCCCEEEEEe------cCCHHHHHHHHHHH
Confidence 346788886 556654 55667888999875433331 1246799993 23666655544433
No 140
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=45.05 E-value=60 Score=26.73 Aligned_cols=57 Identities=16% Similarity=-0.035 Sum_probs=39.0
Q ss_pred CCCCHHH--HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 16 QGIDGSR--VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 16 ~gl~G~~--ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.|++..+ +.+.|++.||.+..-.-++.. ..+..+||+. +..++++++..+.|.+++.
T Consensus 433 ~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~--~~~~~~Ris~------~~~~e~l~~~i~~L~~~~~ 491 (498)
T 3ihj_A 433 HQMAPDMFYCMKLLEETGICVVPGSGFGQR--EGTYHFRMTI------LPPVEKLKTVLQKVKDFHI 491 (498)
T ss_dssp TTSCHHHHHHHHHHHHHCBCCEEGGGTCCC--TTCCBEEEEC------CSCHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHCCEEEEeCcccCCC--CCCCEEEEEe------CCCHHHHHHHHHHHHHHHH
Confidence 3666666 588899999998743333321 1246899997 3578898888877776664
No 141
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=43.95 E-value=53 Score=26.15 Aligned_cols=61 Identities=15% Similarity=0.044 Sum_probs=38.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
|.+.+.+ +.+..++.+.|.+.||.+.-. |+.- +.++.|||+....+ +++|+..+.+.|.++
T Consensus 376 ~~~~~~~---~~~~~~~~~~L~~~gi~v~~~--~~~~--~~~~~lRis~~~~~----t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 376 NEFALAL---PKDPEAVRRALAERGFHGATP--VPRE--YGENLALFAATELH----EEEDLLALREALKEV 436 (438)
T ss_dssp SEEEEEC---SSCHHHHHHHHHHTTCCCCEE--CCTT--SCSSEEEEECCTTC----CHHHHHHHHHHHHHH
T ss_pred EEEEEeC---CCCHHHHHHHHHHCCceeccc--cccc--cCCCeEEEEecccC----CHHHHHHHHHHHHHH
Confidence 3455553 357788888888889987211 1110 01467999986544 458888877776554
No 142
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=43.92 E-value=29 Score=27.95 Aligned_cols=47 Identities=32% Similarity=0.376 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++...+...|++.||.+.. + +| ||+-. ++.++++++..+.|.+++.
T Consensus 396 ~~~~~~~~~ll~~~gV~v~~----G-------~g-Ris~a-----~~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 396 GLTPEHVDYLKEKWSIYLVK----A-------GG-RMSMC-----GLTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp CCCHHHHHHHHHHHCEEECS----G-------GG-EEEGG-----GCCTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEeC----C-------Cc-EEEEe-----cCCHHHHHHHHHHHHHHHH
Confidence 45788888889999999852 1 24 98753 3567889999998888875
No 143
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=43.87 E-value=66 Score=24.65 Aligned_cols=63 Identities=14% Similarity=0.037 Sum_probs=37.4
Q ss_pred eeEEEEeccCCC-CCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQG-IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75 (138)
Q Consensus 6 tHlvlvDlr~~g-l~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI 75 (138)
++++++++...+ .+..+....| ++.||.+......+ ..+..++.|||+.. ..++|+.+..+.|
T Consensus 319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-~~~~~~~~iRis~~------~~~~~i~~~~~~l 383 (386)
T 1u08_A 319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFC-ADPFPHKLIRLCFA------KKESTLLAAAERL 383 (386)
T ss_dssp SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGC-SSCCCSCEEEEECC------SCHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhC-CCCCCCCEEEEEEc------CCHHHHHHHHHHH
Confidence 457788876532 5677776654 68999987432111 11123467999974 2567766655443
No 144
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=43.79 E-value=33 Score=30.41 Aligned_cols=60 Identities=15% Similarity=0.086 Sum_probs=41.9
Q ss_pred eEEEEeccCCCCCH---------HHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDG---------SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 7 HlvlvDlr~~gl~G---------~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
+.|.+++...|++| .++++.|++.||.++++ + ...||+-+ +-|-+++|+..+.+-+.+
T Consensus 534 ~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~----~-----~~~v~~~~----~~g~t~~~~~~l~~al~~ 600 (755)
T 2vyc_A 534 IKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT----T-----DFQIMFLF----SMGVTRGKWGTLVNTLCS 600 (755)
T ss_dssp TEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE----C-----SSEEEEEC----CTTCCTTTTHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec----C-----CCeEEEEE----CCCCCHHHHHHHHHHHHH
Confidence 46788877655555 99999999999999875 1 23466643 455677788777766655
Q ss_pred HH
Q 032537 78 AV 79 (138)
Q Consensus 78 ~l 79 (138)
..
T Consensus 601 ~~ 602 (755)
T 2vyc_A 601 FK 602 (755)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 145
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=43.55 E-value=9.6 Score=28.84 Aligned_cols=60 Identities=7% Similarity=-0.025 Sum_probs=34.1
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++.+++++. ...++..+++.||.+- +.. +..++.|||+.+. ..+++|++++.+.|.+++.
T Consensus 297 ~~~~~~~~~-----~~~~~~l~~~~gi~v~----~~~--~~~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 297 SNQLFPILE-----NTMIAELNNDFDMYTV----EPL--KDGTCIMRLCTSW----ATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp SSEECBEEE-----HHHHHHHTTTEECEEE----EEE--TTTEEEEEEECCT----TCCHHHHHHHHHHHHHC--
T ss_pred cceEEEEcC-----HHHHHHHHHhcCEEEE----ecc--cCCCceEEEEccC----cCCHHHHHHHHHHHHHHHh
Confidence 345555543 3444444445599982 111 1124579998433 2578999988888877663
No 146
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=42.99 E-value=23 Score=27.29 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=32.0
Q ss_pred CCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 18 l~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
++...+...|++.||.+.. |+||+... .+++|+.+..+.|.++
T Consensus 353 ~~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 353 LTKEQVLRLREEFGVYAVA-------------SGRVNVAG-----MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CCHHHHHHHHHHHCEECCT-------------TCEEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCeeecC-------------CceEEEee-----cCHHHHHHHHHHHHhc
Confidence 3567888999999999862 58998653 3678888877776654
No 147
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=42.80 E-value=54 Score=26.77 Aligned_cols=58 Identities=9% Similarity=-0.026 Sum_probs=41.3
Q ss_pred cCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHhh
Q 032537 14 HQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 82 (138)
Q Consensus 14 r~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~~ 82 (138)
+..+++..++.+.|.+.||.++.. . .+..+|+.....++ .++|+++..+.|.+++...
T Consensus 412 ~~~~~~~~~l~~~L~~~Gi~v~g~--~------~~~~~Ri~~~~~~~---~~e~i~~~l~~L~~~l~~~ 469 (514)
T 3mad_A 412 ASDELNIYQVMEEMAGRGWRLNGL--H------RPPAFHVALTLRHT---EPGVVDRFLADLQDAVAQV 469 (514)
T ss_dssp ECSSSCHHHHHHHHHTTTCBCEEE--T------TTTEEEEECCGGGG---STTHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHhcCCEeccC--C------CCCeEEEEEecCCC---CHHHHHHHHHHHHHHHHHH
Confidence 335678888999999889987322 1 13579998654443 4688888888888888643
No 148
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=42.69 E-value=18 Score=27.94 Aligned_cols=71 Identities=8% Similarity=-0.091 Sum_probs=42.6
Q ss_pred eeEEEEeccCC-CCCHHHHHHHHhhcCceeccccCCCCCCC------------------C------CCCceeecChhhhh
Q 032537 6 ILLFAKMFHQQ-GIDGSRVEKVLEAVHIAANKNTVPGDVSA------------------M------VPGGIRMGTPALTS 60 (138)
Q Consensus 6 tHlvlvDlr~~-gl~G~~ae~~Le~~gI~vNkn~iP~d~~~------------------~------~~sGiRlGT~alTt 60 (138)
+|++++++... +.++.++.+.|.+.||.+....-|.-..+ + ..+.|||+...
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--- 366 (388)
T 1b9h_A 290 HYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRV--- 366 (388)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGG---
T ss_pred eEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCC---
Confidence 46888887642 12566778888889999875432211000 0 01135555333
Q ss_pred cCC-CHHHHHHHHHHHHHHHH
Q 032537 61 RGF-VEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 61 RG~-~e~dm~~IA~lI~~~l~ 80 (138)
.+ +++|+..+++.|.+++.
T Consensus 367 -~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 367 -LLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp -GGSCHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHh
Confidence 44 68899998888877663
No 149
>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}
Probab=41.88 E-value=27 Score=23.61 Aligned_cols=15 Identities=7% Similarity=-0.095 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHhhCC
Q 032537 111 AKRCHDVEEYAKQFP 125 (138)
Q Consensus 111 ~~ir~~V~~l~~~fp 125 (138)
+.+++....+.++||
T Consensus 99 ~al~~k~~K~~~RyP 113 (114)
T 2q5z_A 99 KTRELKEVLNKVKYN 113 (114)
T ss_dssp HHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHhCC
Confidence 568888999999998
No 150
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=47.34 E-value=5.6 Score=31.16 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=37.0
Q ss_pred EEeccCCCCCHHHHHHHH-hhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 10 AKMFHQQGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 10 lvDlr~~gl~G~~ae~~L-e~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
++++...+++..+..+.| ++.||.+......+ +..++.|||+... .++++.+..+.|.+++
T Consensus 329 ~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~~------~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 329 WLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIAA------PKSLVEEICKRIVCCL 390 (392)
Confidence 467765456666677777 58999986432222 1124579998432 2567766666665554
No 151
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=40.99 E-value=54 Score=25.25 Aligned_cols=61 Identities=20% Similarity=0.211 Sum_probs=39.7
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCC------CCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVP------GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP------~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~ 76 (138)
++.+.+. ++++.++.+.|.+.||.+..-.-+ +-. ...+.|||+....+ +++|+..+.+.|.
T Consensus 337 ~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~--~~~~~iRis~~~~~----t~e~i~~~~~~l~ 403 (406)
T 3cai_A 337 VVSFAVH--KVPADRVVQRLADNGILAIANTGSRVLDVLGVN--DVGGAVTVGLAHYS----TMAEVDQLVRALA 403 (406)
T ss_dssp EEEEEET--TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTT--TTTCCEEEECCTTC----CHHHHHHHHHHHH
T ss_pred EEEEEEC--CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCC--CCCCeEEEEeecCC----CHHHHHHHHHHHH
Confidence 4566654 567888999999999998643200 000 01357999976544 5788887776654
No 152
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=40.79 E-value=89 Score=24.06 Aligned_cols=61 Identities=10% Similarity=0.131 Sum_probs=42.6
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++.+++... .+..+..+.|.+.||.+... . ++.|||..+.. .+++|+.+..+.|.+++.
T Consensus 333 g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~----~-----~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 333 GFMQGLSLDKS-VKVAKVIQKCQENALLLISC----G-----ENDLRFLPPLI----LQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp TTEEEEEECTT-SCHHHHHHHHHHTTEECEEE----T-----TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCc-chHHHHHHHHHHCCCEEecC----C-----CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 45677776542 36788888888899998732 1 45799974443 466888888888777663
No 153
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=40.23 E-value=31 Score=27.03 Aligned_cols=52 Identities=13% Similarity=0.006 Sum_probs=32.1
Q ss_pred HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 23 VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 23 ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
+.+.|++.||.+.. +..-+.....+||+-. ..-..+.++..+++.+.+++..
T Consensus 319 ~~~ll~~~gV~v~~----g~~~~~~~~~lRi~~~---~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 319 GFNLLKNYGIITIT----VAGMPGASKSLRIDLT---SRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp HHHHHHHHCEECST----TSSSCSSCCSEEEETT---SGGGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEec----CCCCCCCCCeEEEEcC---CchHHHHHHHHHHHHHHHHHHH
Confidence 45778889999863 2211112346999953 2333344588888888777753
No 154
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=39.78 E-value=38 Score=29.79 Aligned_cols=20 Identities=15% Similarity=-0.021 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHhhCCCC
Q 032537 108 SEIAKRCHDVEEYAKQFPTI 127 (138)
Q Consensus 108 ~~~~~ir~~V~~l~~~fp~~ 127 (138)
+.++++|+++.+-...-|++
T Consensus 670 ~~l~~lr~~l~~~~~~s~l~ 689 (723)
T 4gyw_A 670 EYLKKVRGKVWKQRISSPLF 689 (723)
T ss_dssp HHHHHHHHHHHHHHHHSSTT
T ss_pred HHHHHHHHHHHHHHHhCcCc
Confidence 45677888777777666663
No 155
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=39.00 E-value=44 Score=25.52 Aligned_cols=60 Identities=5% Similarity=0.000 Sum_probs=35.8
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+++++.. +..+..+.|.+.||.+..-.-. ....++.|||+.. .++|+.++.+.+.++++
T Consensus 299 ~~~~~~~~---~~~~l~~~l~~~gi~v~~g~~~---~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 299 YLLLRCER---EDIDLQRRLLTQRILIRSCANY---PGLDSRYYRVAIR-------SAAQNERLLAALRNVLT 358 (364)
T ss_dssp EEEEEESC---TTCCHHHHHHTTTEECEECTTS---TTCCTTEEEEECC-------CHHHHHHHHHHHHHHC-
T ss_pred EEEEECCC---cHHHHHHHHHHCCcEEeeCccc---CCCCCCEEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 35666642 2445566666779998632211 1122467999953 37788888877776654
No 156
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=38.81 E-value=42 Score=25.18 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=38.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCC------------C---------CCCCCCCceeecChhhhhcCCC
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPG------------D---------VSAMVPGGIRMGTPALTSRGFV 64 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~------------d---------~~~~~~sGiRlGT~alTtRG~~ 64 (138)
.+++.+.+. +..++.+.|++.||.+..-...+ - .-...++.|||..... ..
T Consensus 245 ~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~----~t 316 (331)
T 1pff_A 245 GSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCE----NV 316 (331)
T ss_dssp CSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSS----CH
T ss_pred ceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecC----CH
Confidence 567777764 67889999999999664321111 0 0011246799987753 34
Q ss_pred HHHHHHHHHHHH
Q 032537 65 EEDFAKVAYFFD 76 (138)
Q Consensus 65 e~dm~~IA~lI~ 76 (138)
++|++.+.+.|.
T Consensus 317 ~~~i~~l~~~l~ 328 (331)
T 1pff_A 317 QDIIDDLKQALD 328 (331)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 667766666554
No 157
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=37.86 E-value=45 Score=25.92 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=34.2
Q ss_pred CCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 18 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 18 l~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
++...+...|++.||.+.. |+||+... .+++|+.+..+.|.+++.
T Consensus 365 ~~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 365 LNPKQVEYLINQKHIYLLP-------------SGRINMCG-----LTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp CCHHHHHHHHHTTCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEecC-------------CcEEEeee-----CCHHHHHHHHHHHHHHHH
Confidence 4577888899999999872 47998552 467889888888877764
No 158
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=36.87 E-value=25 Score=27.76 Aligned_cols=58 Identities=9% Similarity=-0.034 Sum_probs=38.9
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
.+++++.. +..+...|++.||.+..-...+. .++.|||+.. ..++++++..+.|.+++
T Consensus 327 ~~~~~~~~----~~~~~~~l~~~gV~v~pg~~fg~----~~~~iRis~~------~~~e~i~~~~~~L~~~~ 384 (391)
T 3bwn_A 327 FAWLGTKE----ETDLVSELRRHKVMSRAGERCGS----DKKHVRVSML------SREDVFNVFLERLANMK 384 (391)
T ss_dssp EEEEEESS----SCCHHHHHHHTTEECEEGGGGTC----CTTEEEEESC------SCHHHHHHHHHHHHSCC
T ss_pred EEEecCCc----HHHHHHHHHHCCEEEccCCCCCC----CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 46777753 35788899999999874332221 2467999975 26778877777665554
No 159
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=36.37 E-value=53 Score=25.57 Aligned_cols=37 Identities=19% Similarity=0.041 Sum_probs=26.3
Q ss_pred EEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhh
Q 032537 9 FAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALT 59 (138)
Q Consensus 9 vlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alT 59 (138)
+++++ .++.+..+.|.+.||.+.. + ++.|||+-+..+
T Consensus 359 ~~~~~----~~~~~~~~~l~~~gv~v~~----g------~~~iRis~~~~~ 395 (413)
T 3t18_A 359 TFIPT----DKAFDIVKDLEKENIFTIP----S------AKGIRVAICGVG 395 (413)
T ss_dssp EEEEC----SCHHHHHHHHHHTTEECEE----C------SSEEEECTTTSC
T ss_pred EEeCC----CCHHHHHHHHHhCCEEEec----C------CCceEEEEeeCC
Confidence 34554 3788888899999999874 2 367999855433
No 160
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=36.30 E-value=40 Score=25.95 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=31.1
Q ss_pred CHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
+...+...|++.||.+.. |+||+.. ..+++|+..+.+.|.++
T Consensus 351 ~~~~~~~~l~~~gi~v~~-------------~~Ris~~-----~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 351 TPEQVKRIKEEFGIYMVG-------------DSRINIA-----GLNDNTIPILARAIIEV 392 (394)
T ss_dssp CHHHHHHHHHHHCEECCT-------------TCEEEGG-----GCCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEecC-------------CCeEEee-----cCCHhhHHHHHHHHHHc
Confidence 457788999999999862 5899954 25678888777766543
No 161
>2a3q_A Hypothetical protein; MM.29898, BC004623, 2410015N17RIK, structural genomics, PROT structure initiative, PSI; 2.32A {Mus musculus} SCOP: a.204.1.2 PDB: 2q4p_A
Probab=36.06 E-value=49 Score=24.13 Aligned_cols=17 Identities=6% Similarity=0.243 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhhCCCC
Q 032537 111 AKRCHDVEEYAKQFPTI 127 (138)
Q Consensus 111 ~~ir~~V~~l~~~fp~~ 127 (138)
+.+++....|.++||.-
T Consensus 116 eAl~~k~~K~~~Ryp~~ 132 (170)
T 2a3q_A 116 QAVISKMDTNRQRYPVH 132 (170)
T ss_dssp HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhcccH
Confidence 57889999999999973
No 162
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=35.78 E-value=43 Score=26.06 Aligned_cols=53 Identities=11% Similarity=0.014 Sum_probs=34.2
Q ss_pred HHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 24 EKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 24 e~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+.|.+.||.+..-.-|.-..+...+.|||+....+ +++|+..+.+.|.+++.
T Consensus 322 ~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~----t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 322 GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLD----KLTDIDGTVERFEKALD 374 (379)
T ss_dssp SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHH----HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCC----CHHHHHHHHHHHHHHHH
Confidence 567888899876432111112333567999987765 45788887777776664
No 163
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=35.49 E-value=73 Score=25.69 Aligned_cols=62 Identities=15% Similarity=0.095 Sum_probs=39.1
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.+.+.+...+++ .+.-..|++.||.+- ++... .+|+|+|... ..+++|+..+.+.|.++.+
T Consensus 322 ~iv~f~~~~~~~~-~~~~~~L~~~gI~~~----~g~~~---~~~iRiS~~~----~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 322 MNVPFQLADNTLD-KVFLEESFAAGLHAL----KGHRV---VGGMRASIYN----AMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp SEEEEEESSGGGH-HHHHHHHHHTTEECC----BCCTT---TCSEEEECCT----TSCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCcccc-HHHHHHHHHCCCEEe----CCCCC---cCeEEEEcCC----CCCHHHHHHHHHHHHHHHH
Confidence 4555555433455 444455889999853 23221 2579999643 3368999999888877653
No 164
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=34.56 E-value=18 Score=27.88 Aligned_cols=65 Identities=12% Similarity=0.118 Sum_probs=28.9
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceecccc---------------CCCCCCCCCCCceeecC-hhhhhcCCCHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNT---------------VPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAK 70 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~---------------iP~d~~~~~~sGiRlGT-~alTtRG~~e~dm~~ 70 (138)
|++.+.+. +.++.++.+.|. .||.+..-. .+.+. ....+.|||+. ...+ +++|++.
T Consensus 317 ~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~-~~~~~~iRls~~~~~~----t~e~i~~ 388 (400)
T 3vax_A 317 HILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPE-EAASKSLRFSWTPGQA----TDLDVEE 388 (400)
T ss_dssp TEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCH-HHHTSEEEEEEEEC-------------
T ss_pred CEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCc-cccCceEEEEccCCCC----CHHHHHH
Confidence 56666654 678999999999 999876310 00000 00136899987 5443 4578877
Q ss_pred HHHHHHHHH
Q 032537 71 VAYFFDAAV 79 (138)
Q Consensus 71 IA~lI~~~l 79 (138)
+.+.|.+++
T Consensus 389 ~~~~l~~~~ 397 (400)
T 3vax_A 389 LARGVAKLK 397 (400)
T ss_dssp ---------
T ss_pred HHHHHHHHh
Confidence 777776655
No 165
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=33.03 E-value=81 Score=24.37 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=41.4
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceecccc--CCCCCC------------CCCCCceeecChhhhhcCCCHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNT--VPGDVS------------AMVPGGIRMGTPALTSRGFVEEDFAKVA 72 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~--iP~d~~------------~~~~sGiRlGT~alTtRG~~e~dm~~IA 72 (138)
+++.+.+ .+.++.++.+.|.+ |.+..-. .|.... ....+.|||+... ..+++|++.+.
T Consensus 318 ~~~~~~~--~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~t~e~i~~~~ 389 (423)
T 3lvm_A 318 NILNVSF--NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGR----FTTEEEIDYTI 389 (423)
T ss_dssp TEEEEEE--TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCT----TCCHHHHHHHH
T ss_pred CeEEEEe--CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCC----CCCHHHHHHHH
Confidence 4455554 46788888888887 5444211 110000 0003679999763 34689999999
Q ss_pred HHHHHHHHhh
Q 032537 73 YFFDAAVKLT 82 (138)
Q Consensus 73 ~lI~~~l~~~ 82 (138)
+.|.+++...
T Consensus 390 ~~l~~~~~~~ 399 (423)
T 3lvm_A 390 ELVRKSIGRL 399 (423)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999888643
No 166
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=32.56 E-value=56 Score=29.08 Aligned_cols=47 Identities=23% Similarity=0.133 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHH
Q 032537 17 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 76 (138)
Q Consensus 17 gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~ 76 (138)
|++|.++++.|++.||.+.+... . ....++|-|-+++++..+-+-+.
T Consensus 508 Gi~g~~~~~~L~~~~I~~E~~d~---------~----~vl~l~s~g~~~~~~~~L~~aL~ 554 (715)
T 3n75_A 508 GIPASIVAKYLDEHGIVVEKTGP---------Y----NLLFLFSIGIDKTKALSLLRALT 554 (715)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEET---------T----EEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEEecCC---------C----cEEEEeCCCCCHHHHHHHHHHHH
Confidence 78999999999999999987522 1 23566777777777766554443
No 167
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=32.20 E-value=94 Score=19.44 Aligned_cols=73 Identities=10% Similarity=-0.051 Sum_probs=41.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCce--eccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIA--ANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~--vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
-++|++|+.-.+.+|.+.-+.|.+.+.. +---.+-..........++.|....-.+-+..+ ++...|.+++..
T Consensus 48 ~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~---~l~~~i~~~l~~ 122 (133)
T 3nhm_A 48 PDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPP---VLIAQLHALLAR 122 (133)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHH---HHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHH---HHHHHHHHHHhh
Confidence 4789999887788999888888764220 000011111111113457777777777666554 446777777753
No 168
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=32.16 E-value=34 Score=25.91 Aligned_cols=66 Identities=9% Similarity=0.117 Sum_probs=36.5
Q ss_pred eeEEEEeccCC-CCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceee--cChhhhhcCCCHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQ-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRM--GTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 6 tHlvlvDlr~~-gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRl--GT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
++.+++++... +.+..++.+.|.+.||.+..-..++.+. .+-+|+ |+... ....+++.+..+.|.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~---~~~~r~~i~~~~~---~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 289 SNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSAD---VCAFEVSVGDAFA---EIPAKNLELVFRCLEK 357 (359)
T ss_dssp SSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETT---EEEEEEECCTTGG---GSCHHHHHHHHHHHHH
T ss_pred ceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCC---ceEEEEEecCccc---cCCHHHHHHHHHHHHh
Confidence 56778887643 2345778888999999987543322211 123565 32222 2445566555544443
No 169
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=31.95 E-value=31 Score=26.21 Aligned_cols=68 Identities=12% Similarity=-0.032 Sum_probs=38.0
Q ss_pred eeEEEEeccCCC-CCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQG-IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 78 (138)
Q Consensus 6 tHlvlvDlr~~g-l~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~ 78 (138)
++++++++...+ .+..++.+.|.+.||.+..-..+. + ..+.+|+....- .....++++.+..+.|.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~---~-~~~~~r~~i~~~-~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 287 SNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDK---D-GYCSTEISVGDA-YGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp SSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEEC---S-SEEEEEEEBCTT-GGGSCHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccC---C-CceEEEEEecch-hhhcCHHHHHHHHHHHHHh
Confidence 567888886432 235677888999999987432222 1 122577743221 1223556665555555444
No 170
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=31.11 E-value=40 Score=27.29 Aligned_cols=56 Identities=9% Similarity=0.126 Sum_probs=39.4
Q ss_pred EEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 9 FAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 9 vlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+++++. |+++.++.+.|.+.||.+.. ++ .+.|||..... .+++|+ .+.+.+.+++.
T Consensus 296 l~i~~~--~~~~~~l~~~L~~~GI~v~~---~g------~~~iRi~~~~~----~t~e~i-~l~~aL~~~~~ 351 (446)
T 2x3l_A 296 LLIKYE--GFTGHDIQNWFMNAHIYLEL---AD------DYQALAILPLW----HHDDTY-LFDSLLRKIED 351 (446)
T ss_dssp EEEECT--TSCHHHHHHHHHHTTEEESE---EC------SSCEEEECCCC----CTTCCC-CHHHHHHHHHT
T ss_pred EEEEeC--CcCHHHHHHHHHHCCCEEEe---cC------CCEEEEEeecC----CCHHHH-HHHHHHHHHHH
Confidence 677765 78999999999888999852 22 14699987543 345677 77776666654
No 171
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=31.03 E-value=58 Score=27.11 Aligned_cols=51 Identities=20% Similarity=0.220 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 21 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 21 ~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
..+.+.|++.||.+..-..++. ..+.|||+... +.++|++++.+.|.+++.
T Consensus 473 ~~~~~ll~~~GV~v~pg~~f~~----~~~~iRls~a~-----~~~e~i~~~i~~L~~~l~ 523 (533)
T 3f6t_A 473 DFLLKLAEKNGVVLVDGVGFGA----KPGELRVSQAN-----LPTEDYALIGKQVLELLK 523 (533)
T ss_dssp HHHHHHHHHTTSSSCTTEEECS----STTEEEEESSS-----SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccCC----CCCEEEEEEee-----CCHHHHHHHHHHHHHHHH
Confidence 5566778899998763222221 14579998533 568999999998888875
No 172
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=30.92 E-value=53 Score=25.34 Aligned_cols=65 Identities=8% Similarity=-0.030 Sum_probs=38.1
Q ss_pred eeEEEEeccCC--CCCH---------HHHHHHHhhcCceeccccCCCCCC--CCCCCceeecChhhhhcCCCHHHHHHHH
Q 032537 6 ILLFAKMFHQQ--GIDG---------SRVEKVLEAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSRGFVEEDFAKVA 72 (138)
Q Consensus 6 tHlvlvDlr~~--gl~G---------~~ae~~Le~~gI~vNkn~iP~d~~--~~~~sGiRlGT~alTtRG~~e~dm~~IA 72 (138)
+..+++|+... +++. ..++..|++.||.+..-...+... +...+-|||+.. ..++++.+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~------~~~e~l~~~l 403 (410)
T 3e2y_A 330 GYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI------KKDSTLDAAE 403 (410)
T ss_dssp SSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC------CCHHHHHHHH
T ss_pred cEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc------CCHHHHHHHH
Confidence 45677887642 3333 556667889999987432211110 112467999832 2778887776
Q ss_pred HHHH
Q 032537 73 YFFD 76 (138)
Q Consensus 73 ~lI~ 76 (138)
+.|.
T Consensus 404 ~~l~ 407 (410)
T 3e2y_A 404 EIFR 407 (410)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 173
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=30.90 E-value=1.1e+02 Score=19.72 Aligned_cols=73 Identities=5% Similarity=0.037 Sum_probs=38.9
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCC-CCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d-~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
-.+|++|+.-.+.+|.+.-+.|.+.+-.+---.+-+. ........++.|....-.+-+..+++ .+.|.+++..
T Consensus 50 ~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L---~~~i~~~~~~ 123 (141)
T 3cu5_A 50 PNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEI---MDALKQSIQT 123 (141)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHH---HHHHHHHHHH
Confidence 4789999887788998888877653211000111111 12233456788887777777765555 5555555543
No 174
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=30.32 E-value=1.2e+02 Score=24.04 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=39.4
Q ss_pred eEEEEeccC-CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQ-QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~-~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.+-+.+.. .+++ .+....|++.||.+- ++... .+++|+|..-. .+++|+..+.+.|.++++
T Consensus 296 ~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~----~g~~~---~g~iRiS~~~~----~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 296 MNVSFNIAKNKDLE-PLFVKEAEEAGMIGL----KGHRI---LGGIRASIYNA----LNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp SEEEEEESSCTTHH-HHHHHHHHHTTEECC----BCCTT---TCSEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCchhhh-HHHHHHHHHCCCEEe----cCCCc---cCeEEEEccCC----CCHHHHHHHHHHHHHHHH
Confidence 455555443 2344 456688899999853 22221 26799996543 367999888888776653
No 175
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=29.95 E-value=18 Score=23.20 Aligned_cols=22 Identities=14% Similarity=0.388 Sum_probs=18.7
Q ss_pred ccCCCCCHHHHHHHHhhcCcee
Q 032537 13 FHQQGIDGSRVEKVLEAVHIAA 34 (138)
Q Consensus 13 lr~~gl~G~~ae~~Le~~gI~v 34 (138)
|+++||+..+++.+|.++|-..
T Consensus 42 L~sKGLt~eEI~~Al~ra~~~~ 63 (70)
T 2w84_A 42 LKKKGLTDEEIDMAFQQSGTAA 63 (70)
T ss_dssp HHHTTCCHHHHHHHHHHHTCCC
T ss_pred HHHcCCCHHHHHHHHHHccCCC
Confidence 4678999999999999987653
No 176
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=29.23 E-value=1.2e+02 Score=20.83 Aligned_cols=26 Identities=19% Similarity=0.204 Sum_probs=20.7
Q ss_pred eecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 52 RMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 52 RlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
++=-.|+..|-++++|+.+||.-+.+
T Consensus 33 y~PLlALL~R~Ltddev~~Va~~L~~ 58 (107)
T 3ol3_A 33 YFALLALLKRSLTEDEVVRAAQAILR 58 (107)
T ss_dssp HHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHhcccCCHHHHHHHHHHHHh
Confidence 44557899999999999999976543
No 177
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=28.97 E-value=72 Score=23.66 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=34.2
Q ss_pred CHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.+.++.+.|++.|..+.-...|+..- ++.++++..+.+||.+.|+
T Consensus 201 ~~~~~~~~L~~~g~~v~~~~y~g~gH-----------------~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 201 LGHDLSDKLKVSGFANEYKHYVGMQH-----------------SVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHTTTCCEEEEEESSCCS-----------------SCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCeEEEEECCCCC-----------------ccCHHHHHHHHHHHHHHhC
Confidence 46788899999999887666665431 2457899999999998875
No 178
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=28.00 E-value=54 Score=25.32 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=22.8
Q ss_pred eEEEEeccC-CCCCHHHHHHHHhhcCceecc
Q 032537 7 LLFAKMFHQ-QGIDGSRVEKVLEAVHIAANK 36 (138)
Q Consensus 7 HlvlvDlr~-~gl~G~~ae~~Le~~gI~vNk 36 (138)
|++.+.+.. .|+++.++.+.|.+.||.+..
T Consensus 304 ~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 304 FGFSFIIKKDSGVIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred EEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence 456666543 367899999999999999874
No 179
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=27.24 E-value=73 Score=20.32 Aligned_cols=73 Identities=10% Similarity=0.049 Sum_probs=37.7
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCc--eeccccCCCC-CCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHI--AANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI--~vNkn~iP~d-~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
-++|++|+.-.+.+|.++-+.|.+.+- .+---.+-.. ........++.|....-.+-+..+++ ...|.+++..
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l---~~~i~~~~~~ 122 (140)
T 3n53_A 47 PDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDL---LSRIEIHLRT 122 (140)
T ss_dssp CSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHH---HHHHHHHHhh
Confidence 478999987777788888777776441 0000011111 12223446788888887777766554 5666666653
No 180
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=25.66 E-value=1e+02 Score=21.11 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHH
Q 032537 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 75 (138)
Q Consensus 16 ~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI 75 (138)
+||.-..|..+|+.+||.-| .|+| -++++|...|-++|
T Consensus 22 ~GIG~~~A~~I~~~~gid~~---------------~r~~-------~Lt~~ei~~l~~~i 59 (114)
T 3r8n_M 22 YGVGKTRSKAILAAAGIAED---------------VKIS-------ELSEGQIDTLRDEV 59 (114)
T ss_dssp TTCCHHHHHHHHHHTTCCTT---------------CCST-------TCCHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCcCcc---------------cCcc-------cCCHHHHHHHHHHH
Confidence 58899999999999999844 3554 57889998888877
No 181
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=25.64 E-value=1.1e+02 Score=23.67 Aligned_cols=58 Identities=12% Similarity=0.055 Sum_probs=38.2
Q ss_pred CHHHHHHHHhhcCceecccc-CCCCCC----------CCC-------CCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNT-VPGDVS----------AMV-------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~-iP~d~~----------~~~-------~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+..++.+.|.+.||.+.... .|.... ... .+.|||+.... .+++|++.+.+.|.+++.
T Consensus 319 ~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~ 394 (399)
T 2oga_A 319 RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPH----LERPQALRVIDAVREWAE 394 (399)
T ss_dssp SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTT----CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCC----CCHHHHHHHHHHHHHHHH
Confidence 67888899999999987421 110000 000 14699986543 468999999998888774
No 182
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=25.41 E-value=81 Score=24.80 Aligned_cols=60 Identities=12% Similarity=0.096 Sum_probs=37.6
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++++++.+.+-.+. ..+.|.+.||.+.... .+.|||..+. ..+++|+.+..+.|.+++.
T Consensus 357 ~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~---------~~~lRis~~~----~~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 357 LAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG---------RSAIRVIPPL----VISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp TEEEEECSCHHHHHH-HHHHHHHTTEECEEET---------TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCccHHH-HHHHHHHCCCEEecCC---------CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 456677743111234 5566667899987431 3569995332 2467899888888877764
No 183
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=25.29 E-value=99 Score=24.71 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=37.9
Q ss_pred eeEEEEeccCCCCCHH-HHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGS-RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 79 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~-~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l 79 (138)
+..+++++.. +.. .++.+|++.||.+..-...+ . .++.|||+.. ..++++.+..+.|.+++
T Consensus 361 g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~---~-~~~~~Ris~~------~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 361 PSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFE---A-SSRYVRLSLI------KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGT---S-CTTEEEEECS------SCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccC---C-CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 3456778764 233 35566788999986422211 1 3567999975 26677777777666655
No 184
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=25.19 E-value=1.1e+02 Score=22.22 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 16 ~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
+||.-..|..+|.++||.-| .|+| -++++|...|.++|..
T Consensus 36 ~GIG~~~A~~I~~~~gid~~---------------~r~~-------~Lt~~ei~~l~~~i~~ 75 (155)
T 2xzm_M 36 RGIGRRFAYIICKVLKIDPN---------------ARAG-------LLTEDQCNKITDLIAD 75 (155)
T ss_dssp TTCCHHHHHHHHHHTTCCSS---------------SCSS-------CSCHHHHHHHHHHHHS
T ss_pred cccCHHHHHHHHHHcCCCcc---------------cccc-------cCCHHHHHHHHHHHhC
Confidence 58889999999999999844 4555 4679999999988865
No 185
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=24.98 E-value=28 Score=21.10 Aligned_cols=18 Identities=6% Similarity=0.409 Sum_probs=15.0
Q ss_pred ccCCCCCHHHHHHHHhhc
Q 032537 13 FHQQGIDGSRVEKVLEAV 30 (138)
Q Consensus 13 lr~~gl~G~~ae~~Le~~ 30 (138)
|+++||+..+++.+|.++
T Consensus 37 L~sKGLt~~EI~~Al~rs 54 (54)
T 3ff5_A 37 LKKKGLTDEEIDLAFQQS 54 (54)
T ss_dssp HHHTTCCHHHHHHHHHHC
T ss_pred HHHcCCCHHHHHHHHHcC
Confidence 467899999999999864
No 186
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=24.76 E-value=45 Score=25.77 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=25.4
Q ss_pred cccceeEEEEec------cCCCCCHHHHHHHHhhcCceec
Q 032537 2 KSWMILLFAKMF------HQQGIDGSRVEKVLEAVHIAAN 35 (138)
Q Consensus 2 ~~~~tHlvlvDl------r~~gl~G~~ae~~Le~~gI~vN 35 (138)
.|||+|++-+-. ..+.-....+.+.|+..|+.|+
T Consensus 11 esw~~~~~~~kg~~~~~~~~y~~g~~~~~~aL~~~~~~V~ 50 (248)
T 3soz_A 11 ESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRQGNIDVD 50 (248)
T ss_dssp CCCEEEEEEEETTEEEEEEEECCCSHHHHHHHTTTTCEEE
T ss_pred CceeeeeeEeecccccccchhhhhHHHHHHHHhcCCceeE
Confidence 489999987752 1234345778899999999988
No 187
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=24.66 E-value=1.8e+02 Score=20.26 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=43.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCC-CCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPG-DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~-d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
-++|++|+.-.+.+|.++-+.+.+.+-.+---.+-. +.......+++.|....-..-+..+++ ...|..++..
T Consensus 52 ~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L---~~~i~~~~~~ 125 (233)
T 1ys7_A 52 PDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAEL---VARVKALLRR 125 (233)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHH---HHHHHHHHhh
Confidence 478999988778899988888876431110001111 112233456788887777777765554 5556666543
No 188
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=24.12 E-value=52 Score=19.63 Aligned_cols=20 Identities=5% Similarity=0.230 Sum_probs=15.7
Q ss_pred hhhcCCCHHHHHHHHHHHHH
Q 032537 58 LTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 58 lTtRG~~e~dm~~IA~lI~~ 77 (138)
|....++++|+..|+++|..
T Consensus 59 Mp~~~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 59 MPPQNVTDAEAKQLAQWILS 78 (80)
T ss_dssp BCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHh
Confidence 33348999999999999853
No 189
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.77 E-value=1.4e+02 Score=18.76 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=43.5
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhh--cCceeccccCCCC-CCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEA--VHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~--~gI~vNkn~iP~d-~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
-.+|++|+.-.+.+|.+.-+.|.+ .+-.+---.+-.. ........++.|...+-.+-+..+++ ...|..++.
T Consensus 52 ~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l---~~~i~~~~~ 126 (142)
T 3cg4_A 52 SGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDL---IEKTTFFMG 126 (142)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHH---HHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHH---HHHHHHHHH
Confidence 479999988777899888888876 2211111111111 12233456788887777777766554 556666664
No 190
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=23.66 E-value=1.4e+02 Score=23.83 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=39.5
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++...+ +..++.+.|.+.||.+... . .+.|||..+. ..+++|+.+..+.|.+++.
T Consensus 387 ~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~----g-----~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 387 LMCAFSLPTTA-DRDELIRQLWQRAVIVLPA----G-----ADTVRFRPPL----TVSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp TEEEEECSSHH-HHHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECChH-HHHHHHHHHHHCCeEEecC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 45667775321 2455666666789998743 1 3579997433 3577899888888877764
No 191
>3bn7_A Ferredoxin-like protein; stress responsive A/B barre structural genomics, joint center for structural genomics; HET: MSE; 1.64A {Caulobacter crescentus}
Probab=23.55 E-value=78 Score=21.35 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=31.2
Q ss_pred cceeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhh
Q 032537 4 WMILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALT 59 (138)
Q Consensus 4 ~~tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alT 59 (138)
-..|+|++-+++ +++..+.+.+++...-. + .||+=. .+..|...-+
T Consensus 20 mi~HIVlfklK~-~~~~~~~~~~~~~l~~L--~-~Ip~i~------~~~vG~~~s~ 65 (120)
T 3bn7_A 20 MLFHQVFFWLKN-PGDKADRDKLIAGLKAL--K-AIDVIQ------QLHVGVPAAT 65 (120)
T ss_dssp CEEEEEEEEESS-TTCHHHHHHHHHHHHGG--G-GSTTCS------EEEEECCCCC
T ss_pred cEEEEEEEEECC-CCCHHHHHHHHHHHHhc--c-CCCCeE------EEEEccCCCc
Confidence 357999999876 66888877777665432 2 466654 3677776654
No 192
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=23.33 E-value=2.4e+02 Score=22.68 Aligned_cols=59 Identities=3% Similarity=-0.081 Sum_probs=41.2
Q ss_pred eEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++.. +.+..++.+.|.+.||.+.. + .+-|||..+.. .+++|+.++.+.|.+++.
T Consensus 393 ~~~~i~l~~-~~~~~~~~~~l~~~Gv~v~~----~------~~~lRi~p~~~----~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 393 AIGVIECDR-PVDLAVATPAALDRGVWLRP----F------RNLVYAMPPYI----CTPAEITQITSAMVEVAR 451 (457)
T ss_dssp SCEEEEESS-CCCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECC-cccHHHHHHHHHHCCeEEEe----c------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 355666654 34678888888888999862 2 14689875543 367899988888888775
No 193
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=22.77 E-value=85 Score=19.75 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=40.8
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCCC-CCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d~-~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
-++|++|+.-.+.+|.+.-+.|.+.+-.+---.+-... .......++.|....-..-+..++ +...|..++.
T Consensus 48 ~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~---l~~~i~~~~~ 120 (136)
T 1mvo_A 48 PDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPRE---VNARVKAILR 120 (136)
T ss_dssp CSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHH---HHHHHHHHHH
T ss_pred CCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHH---HHHHHHHHHH
Confidence 36899998877889988888887653211111111111 111223567777666666665554 4555656554
No 194
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=22.40 E-value=1e+02 Score=21.29 Aligned_cols=72 Identities=11% Similarity=0.149 Sum_probs=43.2
Q ss_pred eeEEEEeccCCCCCHHHHHHHHhhcCceeccccCCCC-CCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 6 ILLFAKMFHQQGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 6 tHlvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~iP~d-~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
-++|++|+.-.+.+|.++-+.+.+.+-.+---.+-+. .......+++.|....-..-+..+++ ...|..++.
T Consensus 49 ~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~L---~~~i~~~~~ 121 (208)
T 1yio_A 49 HGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQAL---LDAIEQGLQ 121 (208)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHH---HHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHCCCcEEEeCCCCHHHH---HHHHHHHHh
Confidence 4799999887788999988888765311110111111 12233456788877777777766654 445555554
No 195
>2kts_A Heat shock protein HSLJ; NP_415897.1, JCSG, stress response, structural genomics, PSI protein structure initiative; NMR {Escherichia coli}
Probab=21.94 E-value=68 Score=21.22 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=28.6
Q ss_pred CCceeecChhhhhcCCCHHHHHHHHHHHHHHHHh
Q 032537 48 PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 81 (138)
Q Consensus 48 ~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~~ 81 (138)
.+-|+||-.+.|.+-|.+++|..+-..+.++|..
T Consensus 55 ~~~l~~~~~~sT~maC~~~~m~~~E~~~~~~L~~ 88 (117)
T 2kts_A 55 NGELTAKGLAMTRMMCANPQLNELDNTISEMLKE 88 (117)
T ss_dssp SSEECCSSEEECCCCCSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEECchheEccCCCCHHHHHHHHHHHHHhcC
Confidence 4579999999999999888998877777788864
No 196
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=21.61 E-value=1.9e+02 Score=22.47 Aligned_cols=53 Identities=13% Similarity=0.240 Sum_probs=34.7
Q ss_pred CHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 19 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 19 ~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
...+..+.|.+.||.+..... +. ..+.|||..+.. .+++|+.+..+.|.+++.
T Consensus 378 ~~~~~~~~l~~~Gv~v~~~~~-~~----~~~~lRi~~~~~----~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 378 LGAKITRECMNLGLSMNIVQL-PG----MGGVFRIAPPLT----VSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp HHHHHHHHHHHTTEECCEECC-TT----SCCEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEeccCC-CC----CCCEEEEECCcC----CCHHHHHHHHHHHHHHHH
Confidence 356677777788999864321 11 135799974433 467899888888877664
No 197
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=21.39 E-value=1.9e+02 Score=22.72 Aligned_cols=60 Identities=8% Similarity=-0.035 Sum_probs=39.7
Q ss_pred eEEEEeccCCCC----CHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 7 LLFAKMFHQQGI----DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 7 HlvlvDlr~~gl----~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
.++.+++....- +..++.+.|.+.||.+... .+.|||+-+. ..+++|+.++.+.|.+++.
T Consensus 382 ~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------g~~iRis~~~----~~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 382 LAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG----------GDTLQFGPTF----NSKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp TEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE----------TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCcccccccHHHHHHHHHHCCcEEecC----------CCEEEEECCC----cCCHHHHHHHHHHHHHHHH
Confidence 467777754221 1225666666779998743 1469998543 3577999988888887774
No 198
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=21.37 E-value=1.3e+02 Score=24.48 Aligned_cols=50 Identities=18% Similarity=0.068 Sum_probs=33.7
Q ss_pred HHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHHHHH
Q 032537 23 VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 80 (138)
Q Consensus 23 ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~~l~ 80 (138)
+.+.|++.||.+..-.-++.. ..++.+||... ..++++++..+.|.+++.
T Consensus 443 ~~~ll~~~gI~v~pg~~f~~~--~g~~~iRis~~------~~~e~i~~~i~~l~~~~~ 492 (500)
T 3tcm_A 443 ALRLLESTGIVVVPGSGFGQV--PGTWHFRCTIL------PQEDKIPAVISRFTVFHE 492 (500)
T ss_dssp HHHHHHHHCEECEESTTTCCC--TTCCBEEEESC------SCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCcccCCC--CCCCEEEEEEC------CCHHHHHHHHHHHHHHHH
Confidence 568899999998743333221 12456999965 566788888877777664
No 199
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=21.35 E-value=57 Score=19.61 Aligned_cols=16 Identities=19% Similarity=0.110 Sum_probs=11.6
Q ss_pred CCCHHHHHHHHHHHHH
Q 032537 62 GFVEEDFAKVAYFFDA 77 (138)
Q Consensus 62 G~~e~dm~~IA~lI~~ 77 (138)
.++++|+..|+.+|..
T Consensus 67 ~ls~~ei~~l~~yi~~ 82 (85)
T 3cu4_A 67 MIPPADALKIGEYVVA 82 (85)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4778888888877753
No 200
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.01 E-value=1.1e+02 Score=21.95 Aligned_cols=40 Identities=15% Similarity=0.225 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 16 ~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
+||.-..|..+|..+||..| .|+| -++++|...|-++|..
T Consensus 29 ~GIG~~~A~~I~~~~gid~~---------------~r~g-------~Lt~~ei~~i~~~i~~ 68 (148)
T 3j20_O 29 KGIGINFATMVCRVAGLDPF---------------MKAG-------YLTDEQVKKIEEILAD 68 (148)
T ss_dssp TTCCHHHHHHHHHHHTCCSS---------------SCTT-------BCCHHHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHhCCCCC---------------ceec-------cCCHHHHHHHHHHHhc
Confidence 48888999999999999844 4555 5789999999988864
No 201
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=20.76 E-value=2.2e+02 Score=22.02 Aligned_cols=73 Identities=14% Similarity=0.028 Sum_probs=48.9
Q ss_pred EEEEeccCCCCCHHHHHHHHhhcCceecccc-------CCCCC-CCCCCCceee-cChh---------hhhcCCCHHHHH
Q 032537 8 LFAKMFHQQGIDGSRVEKVLEAVHIAANKNT-------VPGDV-SAMVPGGIRM-GTPA---------LTSRGFVEEDFA 69 (138)
Q Consensus 8 lvlvDlr~~gl~G~~ae~~Le~~gI~vNkn~-------iP~d~-~~~~~sGiRl-GT~a---------lTtRG~~e~dm~ 69 (138)
-+.|.+|....-..++.+.|++.||+.--.- +|... ......-+|+ |... ....+.++++++
T Consensus 151 ~~AvE~Rh~sW~~~~~~~lL~~~~v~~V~~D~~~~~~~~P~~~~~t~~~~yvRlHG~~~~~w~~~~~~~y~~~Y~~~eL~ 230 (273)
T 1vpq_A 151 ELAVEFRHYSWDREETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELK 230 (273)
T ss_dssp CEEEECCBGGGCSHHHHHHHHHHTCEEEEEECCCCTTBCCCCCCCSSSEEEEEECCCCTTTTTCCGGGTTCCCCCHHHHH
T ss_pred CEEEEccCchhccHHHHHHHHHcCcEEEEeCCCCCCCCCCcccccCCCceEEEEeCCCccccccccccccccCCCHHHHH
Confidence 4677788766655689999999988744222 33222 1112335787 7665 556689999999
Q ss_pred HHHHHHHHHHH
Q 032537 70 KVAYFFDAAVK 80 (138)
Q Consensus 70 ~IA~lI~~~l~ 80 (138)
.+|+.|.....
T Consensus 231 ~wa~~i~~~~~ 241 (273)
T 1vpq_A 231 TLFEDVVELSR 241 (273)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99998877553
No 202
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=20.64 E-value=82 Score=22.08 Aligned_cols=40 Identities=20% Similarity=0.400 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 16 ~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
+||.-..|..+|+.+||.-| .|+| -++++|...|-++|.+
T Consensus 23 ~GIG~~~A~~I~~~~gi~~~---------------~r~~-------~Lt~~ei~~l~~~i~~ 62 (126)
T 2vqe_M 23 YGIGKARAKEALEKTGINPA---------------TRVK-------DLTEAEVVRLREYVEN 62 (126)
T ss_dssp SSCCSHHHHHHTTTTTCCTT---------------SBGG-------GCCHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHcCCCcc---------------cccC-------cCCHHHHHHHHHHHHH
Confidence 58888999999999998743 4555 4679999999988864
No 203
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=20.13 E-value=1.3e+02 Score=21.65 Aligned_cols=40 Identities=18% Similarity=0.276 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHhhcCceeccccCCCCCCCCCCCceeecChhhhhcCCCHHHHHHHHHHHHH
Q 032537 16 QGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 77 (138)
Q Consensus 16 ~gl~G~~ae~~Le~~gI~vNkn~iP~d~~~~~~sGiRlGT~alTtRG~~e~dm~~IA~lI~~ 77 (138)
+||.-..|..+|.++||..| .|+| -++++|...|-++|..
T Consensus 34 ~GIG~~~A~~I~~~~gid~~---------------~r~g-------~Lt~~ei~~l~~~i~~ 73 (152)
T 3iz6_M 34 KGVGRRFSNIVCKKADIDMN---------------KRAG-------ELSAEEMDRLMAVVHN 73 (152)
T ss_dssp TTCCHHHHHHHHHHHTCCSS---------------SBTT-------TSCHHHHHHHHHHHHS
T ss_pred cCcCHHHHHHHHHHcCCCCC---------------cEeC-------cCCHHHHHHHHHHHHh
Confidence 58888999999999999844 4555 5778999988887753
Done!