BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032539
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
PE=2 SV=1
Length = 346
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Query: 50 QQTCPIDALKLSACVDVLGGLIHVGIGGNPKEKCCPLLQGLADLDAAICLCTAIRLKALN 109
Q TCPIDALKL ACVDVLGGLIH+GIGG+ K+ CCPLL GL DLDAAICLCT IRLK LN
Sbjct: 258 QPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLN 317
Query: 110 LVNLLVPVSLNVLVNDCGKHVPAGFKCPT 138
+N+++P++L VL++DCGK+ P FKCP+
Sbjct: 318 -INIILPIALQVLIDDCGKYPPKDFKCPS 345
>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
GN=At4g00165 PE=2 SV=1
Length = 128
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 42 PKPKPPSKQQT--CPIDALKLSACVDVLGGLIHVGIGGNPKEKCCPLLQGLADLDAAICL 99
P P PP+KQ T CP D LK C LG L+ IG P ++CC L++GLAD +AA+CL
Sbjct: 33 PCPPPPAKQATTKCPRDTLKFGVCGSWLG-LVSEVIGTPPSQECCSLIKGLADFEAAVCL 91
Query: 100 CTAIRLKALNLVNLLVPVSLNVLVNDCGKHVPAGFKC 136
CTA++ L + + +PV+L +L+N CGK+VP GF C
Sbjct: 92 CTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128
>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Query: 48 SKQQTCPIDALKLSACVDVLGGLIHVGIGGNPKEKCCPLLQGLADLDAAICLCTAIRLKA 107
CPIDALKL C VLG L+ VG+ E+CCPLL+GL DLDAA+CLCTAI+
Sbjct: 43 HSHGRCPIDALKLKVCAKVLG-LVKVGLP--QYEQCCPLLEGLVDLDAALCLCTAIKANV 99
Query: 108 LNLVNLLVPVSLNVLVNDCGKHVPAGFKCPT 138
L ++L VP+SLN ++N+CG+ P F CP
Sbjct: 100 LG-IHLNVPLSLNFILNNCGRICPEDFTCPN 129
>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
Length = 137
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 53 CPIDALKLSACVDVLGGLIHVGIGGNPKEKCCPLLQGLADLDAAICLCTAIRLKALNLVN 112
CP DALKL C DVL + +V IG P CC LL+GL +L+AA+CLCTAI+ L N
Sbjct: 54 CPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG-KN 112
Query: 113 LLVPVSLNVLVNDCGKHVPAGFKC 136
L +P++L++++N+CGK VP GF+C
Sbjct: 113 LNLPIALSLVLNNCGKQVPNGFEC 136
>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1
Length = 80
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 59 KLSACVDVLGGLIHVGIGGNPKEKCCPLLQGLADLDAAICLCTAIRLKALNLVNLLVPVS 118
LS C+++LGG + + CC L+ GL D++A +CLC I+L+AL ++NL +
Sbjct: 10 DLSICLNILGGSLGT------VDDCCALIGGLGDIEAIVCLC--IQLRALGILNL--NRN 59
Query: 119 LNVLVNDCGKHVPAGFKCP 137
L +++N CG+ P+ CP
Sbjct: 60 LQLILNSCGRSYPSNATCP 78
>sp|P12300|GLGL3_WHEAT Glucose-1-phosphate adenylyltransferase large subunit,
chloroplastic/amyloplastic (Fragment) OS=Triticum
aestivum GN=AGA.7 PE=2 SV=1
Length = 500
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 27 CSNPPSV----PKTPSSPSPKPKPPSKQQTCPI-DALKLSAC 63
C PP PKTP SP+ PP+K C I +A+ L C
Sbjct: 348 CEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKEAIILHGC 389
>sp|Q8IYB3|SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 OS=Homo sapiens
GN=SRRM1 PE=1 SV=2
Length = 904
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
Query: 28 SNPPSVPKTPSSPSPKPK------PPSKQQTCPI 55
++PP PK +SPSP PK PP KQ++ P+
Sbjct: 615 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPV 648
>sp|O88559|MEN1_MOUSE Menin OS=Mus musculus GN=Men1 PE=1 SV=2
Length = 611
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 9 LLILLLNLGTLLPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV 64
L++L L LG + LA + P +VP+ PSP P PP P+ L + A +
Sbjct: 34 LVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPDPPGGLTYFPVADLSIIAAL 89
>sp|Q9WVR8|MEN1_RAT Menin OS=Rattus norvegicus GN=Men1 PE=1 SV=1
Length = 610
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 9 LLILLLNLGTLLPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV 64
L++L L LG + LA + P +VP+ PSP P PP P+ L + A +
Sbjct: 34 LVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPDPPGGLTYFPVADLSIIAAL 89
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 28 SNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACVDVLGGLIHVGIGGNPKEKCCPLL 87
+ PP P PS + +P PP+ ++ + ++ GL HV I P++ CC L
Sbjct: 204 NEPPVTPLLPSYGTVQPHPPAVDRSLKPSSYGSNSSGVTSDGLRHVKI---PRDVCCKFL 260
Query: 88 Q 88
Q
Sbjct: 261 Q 261
>sp|Q5R5Q2|SRRM1_PONAB Serine/arginine repetitive matrix protein 1 OS=Pongo abelii
GN=SRRM1 PE=2 SV=1
Length = 917
Score = 32.3 bits (72), Expect = 1.00, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 6/34 (17%)
Query: 28 SNPPSVPKTPSSPSPKPK------PPSKQQTCPI 55
++PP PK +SPSP PK PP KQ++ P+
Sbjct: 629 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPV 662
>sp|Q0P5I0|MEN1_BOVIN Menin OS=Bos taurus GN=MEN1 PE=2 SV=1
Length = 610
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 9 LLILLLNLGTLLPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV 64
L++L L LG + LA + P +VP+ PSP P PP P+ L + A +
Sbjct: 34 LVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPDPPGGLTYFPVADLSIIAAL 89
>sp|A2SXS5|MEN1_CANFA Menin OS=Canis familiaris GN=MEN1 PE=2 SV=1
Length = 615
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 9 LLILLLNLGTLLPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV 64
L++L L LG + LA + P +VP+ PSP P PP P+ L + A +
Sbjct: 34 LVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPDPPGGLTYFPVADLSIIAAL 89
>sp|P55234|GLGL2_MAIZE Glucose-1-phosphate adenylyltransferase large subunit 2,
chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1
Length = 521
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 27 CSNPPSV----PKTPSSPSPKPKPPSKQQTCPI-DALKLSAC 63
C PP PKTP SP+ PP+K C I DA+ C
Sbjct: 365 CEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGC 406
>sp|O00255|MEN1_HUMAN Menin OS=Homo sapiens GN=MEN1 PE=1 SV=4
Length = 615
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 9 LLILLLNLGTLLPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV 64
L++L L LG + LA + P +VP+ PSP P PP P+ L + A +
Sbjct: 34 LVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPDPPGGLTYFPVADLSIIAAL 89
>sp|P53395|ODB2_MOUSE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex, mitochondrial OS=Mus
musculus GN=Dbt PE=2 SV=2
Length = 482
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 19 LLPSLASDCSNPPSVPKTPSSPSPKPKPP---SKQQTCPIDALK 59
L PS S+ + PP PK + P+P KPP K +T P+ +
Sbjct: 217 LPPSPKSEITPPPPQPKDRTFPTPIAKPPVFTGKDRTEPVTGFQ 260
>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
japonica GN=LTPL1 PE=1 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 36 TPSSPSPKPKPPSKQQTCPIDALKLSACVDVLGGLIHVGIG----GNPKEKCCPLLQG-L 90
T SSP+P P C +ALKL+ C+D +V G P + CC ++G L
Sbjct: 28 TASSPAPAP-----AVDCTAEALKLADCLD------YVTPGKTAPSRPSKLCCGEVKGAL 76
Query: 91 ADLDAAICLCTAIRLKALNL-VNLLVPVSLNVLVNDCGKHVPAGFKC 136
D A CLC A K L L +N+ + L CG A KC
Sbjct: 77 KDSAAVGCLCAAFTSKTLPLPINITRALHLPAA---CGADASAFSKC 120
>sp|P53452|DRD1L_TAKRU D(1)-like dopamine receptor OS=Takifugu rubripes GN=d14 PE=3 SV=1
Length = 459
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 31 PSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACV---DVLGGLIHVGIGGNPKEKCCPLL 87
PS P S PK S P L + D GG + VG+ N EK P +
Sbjct: 371 PSCQYQPKSHIPKEGNHSSSYVIPHSILCQEEELQKKDGFGGEMEVGLVNNAMEKVSPAI 430
Query: 88 QGLADLDAAICLCT 101
G D DAA+ L T
Sbjct: 431 SGNFDSDAAVTLET 444
>sp|Q8IVL0|NAV3_HUMAN Neuron navigator 3 OS=Homo sapiens GN=NAV3 PE=1 SV=3
Length = 2385
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 20 LPSLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPI 55
LP A DC + P +S SP PP K+Q P+
Sbjct: 1746 LPHNAGDCGSASMKPSQSASASPLVWPPKKRQNGPV 1781
>sp|P55066|NCAN_MOUSE Neurocan core protein OS=Mus musculus GN=Ncan PE=2 SV=1
Length = 1268
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
Query: 21 PSLASDCSNPPSVPKTPSSPSPKP---KPPSKQQTCP 54
PSL S PSVP T S+PSPKP + PS + P
Sbjct: 571 PSLIS-----PSVPSTESTPSPKPGAAEAPSVKSAIP 602
>sp|Q6NXI6|RPRD2_MOUSE Regulation of nuclear pre-mRNA domain-containing protein 2 OS=Mus
musculus GN=Rprd2 PE=1 SV=1
Length = 1469
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 22 SLASDCSNPPSVPKTPSSPSPKPKPPSKQQTCPIDALKLSACVDV 66
S AS C+ PPSVP T + P PKP + P L A VD+
Sbjct: 429 SKASPCA-PPSVPTTAAPPLPKPLSTALLSPSPTLVLPNLANVDL 472
>sp|Q52KI8|SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 OS=Mus musculus
GN=Srrm1 PE=1 SV=2
Length = 946
Score = 28.9 bits (63), Expect = 10.0, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Query: 28 SNPPSVPKTPSSPSPKPK------PPSKQQT 52
++PP PK +SPSP PK PP KQ++
Sbjct: 634 ASPPPPPKRRASPSPPPKRRVSHSPPPKQRS 664
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,487,881
Number of Sequences: 539616
Number of extensions: 2428505
Number of successful extensions: 21188
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 19757
Number of HSP's gapped (non-prelim): 1344
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)