Query 032540
Match_columns 138
No_of_seqs 186 out of 1129
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 03:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032540.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032540hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t3k_A Arath CDC25, dual-speci 100.0 2.9E-31 9.8E-36 177.7 7.2 124 3-127 25-149 (152)
2 3iwh_A Rhodanese-like domain p 100.0 3.6E-31 1.2E-35 166.5 5.2 101 5-119 1-102 (103)
3 3eme_A Rhodanese-like domain p 100.0 2.8E-30 9.6E-35 162.3 5.7 101 5-119 1-102 (103)
4 3foj_A Uncharacterized protein 100.0 2.9E-30 9.7E-35 161.5 5.0 99 5-117 1-100 (100)
5 3gk5_A Uncharacterized rhodane 100.0 3.7E-30 1.3E-34 163.2 5.3 105 5-125 3-107 (108)
6 1gmx_A GLPE protein; transfera 100.0 1.9E-29 6.4E-34 159.8 4.5 104 4-121 3-106 (108)
7 3hix_A ALR3790 protein; rhodan 99.9 5.9E-29 2E-33 157.1 4.3 103 11-125 1-105 (106)
8 1qxn_A SUD, sulfide dehydrogen 99.9 3E-28 1E-32 160.4 6.6 106 4-120 21-130 (137)
9 2hhg_A Hypothetical protein RP 99.9 2.3E-28 7.8E-33 161.0 5.3 110 4-122 20-136 (139)
10 3ilm_A ALR3790 protein; rhodan 99.9 4.4E-28 1.5E-32 160.3 4.3 103 8-122 2-106 (141)
11 1tq1_A AT5G66040, senescence-a 99.9 4.2E-28 1.4E-32 158.1 3.0 106 4-119 16-129 (129)
12 3nhv_A BH2092 protein; alpha-b 99.9 1.1E-27 3.9E-32 158.9 4.7 106 6-124 16-125 (144)
13 3flh_A Uncharacterized protein 99.9 3.3E-27 1.1E-31 152.9 5.8 102 6-120 15-120 (124)
14 3d1p_A Putative thiosulfate su 99.9 3.7E-27 1.3E-31 155.3 5.2 107 4-119 21-138 (139)
15 1wv9_A Rhodanese homolog TT165 99.9 8.3E-28 2.8E-32 148.7 1.7 94 5-114 1-94 (94)
16 2k0z_A Uncharacterized protein 99.9 2.1E-27 7.2E-32 150.9 3.1 102 5-122 4-105 (110)
17 2j6p_A SB(V)-AS(V) reductase; 99.9 1.1E-25 3.9E-30 150.4 8.9 111 4-120 3-123 (152)
18 3f4a_A Uncharacterized protein 99.9 1.5E-26 5.2E-31 157.1 3.0 111 4-119 29-158 (169)
19 2fsx_A RV0390, COG0607: rhodan 99.9 1.3E-25 4.3E-30 149.5 6.5 108 5-121 4-141 (148)
20 1vee_A Proline-rich protein fa 99.9 3E-25 1E-29 145.5 8.1 113 5-126 4-131 (134)
21 3i2v_A Adenylyltransferase and 99.9 4.8E-26 1.6E-30 147.4 3.0 106 6-116 1-122 (127)
22 1e0c_A Rhodanese, sulfurtransf 99.9 9.1E-25 3.1E-29 157.9 8.7 112 6-125 9-135 (271)
23 3hzu_A Thiosulfate sulfurtrans 99.9 1.9E-24 6.5E-29 159.8 10.4 113 5-125 39-165 (318)
24 1urh_A 3-mercaptopyruvate sulf 99.9 2.1E-24 7.3E-29 156.7 10.4 113 6-126 4-141 (280)
25 3g5j_A Putative ATP/GTP bindin 99.9 1E-24 3.6E-29 142.1 6.5 97 4-113 3-130 (134)
26 3aay_A Putative thiosulfate su 99.9 2.5E-24 8.6E-29 156.0 8.5 113 5-125 5-131 (277)
27 1c25_A CDC25A; hydrolase, cell 99.9 4.3E-25 1.5E-29 148.6 3.8 116 4-121 21-149 (161)
28 1uar_A Rhodanese; sulfurtransf 99.9 1.6E-24 5.6E-29 157.6 6.0 114 4-125 6-133 (285)
29 2a2k_A M-phase inducer phospha 99.9 1.7E-24 5.9E-29 147.5 5.8 116 4-121 22-151 (175)
30 2vsw_A Dual specificity protei 99.9 2.1E-24 7.3E-29 144.1 5.9 115 6-123 4-137 (153)
31 2ouc_A Dual specificity protei 99.9 1E-24 3.4E-29 143.4 3.7 111 6-121 1-140 (142)
32 1qb0_A Protein (M-phase induce 99.9 3.8E-24 1.3E-28 150.0 6.8 116 4-121 42-171 (211)
33 1e0c_A Rhodanese, sulfurtransf 99.9 8.6E-24 2.9E-28 152.8 8.5 105 6-119 147-271 (271)
34 2jtq_A Phage shock protein E; 99.9 4.3E-24 1.5E-28 129.5 4.8 84 21-119 1-84 (85)
35 1rhs_A Sulfur-substituted rhod 99.9 2.9E-23 1E-27 151.9 9.2 112 6-125 8-148 (296)
36 1yt8_A Thiosulfate sulfurtrans 99.9 7.7E-24 2.6E-28 166.1 6.3 111 4-125 5-116 (539)
37 1urh_A 3-mercaptopyruvate sulf 99.9 1E-23 3.6E-28 153.0 6.4 105 6-119 152-278 (280)
38 3olh_A MST, 3-mercaptopyruvate 99.9 6.4E-23 2.2E-27 150.7 10.1 113 5-125 21-163 (302)
39 4f67_A UPF0176 protein LPG2838 99.9 1.6E-23 5.4E-28 151.0 5.9 103 4-115 120-224 (265)
40 1rhs_A Sulfur-substituted rhod 99.9 2.3E-23 8E-28 152.4 6.8 107 6-121 160-290 (296)
41 3op3_A M-phase inducer phospha 99.9 1.8E-23 6.2E-28 146.8 5.3 115 4-120 55-183 (216)
42 1yt8_A Thiosulfate sulfurtrans 99.9 1.3E-22 4.4E-27 159.2 8.2 108 4-124 375-482 (539)
43 1hzm_A Dual specificity protei 99.9 2.3E-23 7.8E-28 139.1 2.7 104 4-113 14-142 (154)
44 1uar_A Rhodanese; sulfurtransf 99.9 1.7E-22 6E-27 146.9 7.0 107 6-120 146-283 (285)
45 3tp9_A Beta-lactamase and rhod 99.9 3.5E-23 1.2E-27 160.0 3.1 103 4-119 372-474 (474)
46 3olh_A MST, 3-mercaptopyruvate 99.9 2.6E-22 9E-27 147.4 6.2 103 6-117 175-299 (302)
47 2wlr_A Putative thiosulfate su 99.9 4.4E-22 1.5E-26 152.1 7.5 111 7-126 273-413 (423)
48 3hzu_A Thiosulfate sulfurtrans 99.9 2.7E-22 9.2E-27 148.3 5.4 104 7-121 180-310 (318)
49 1okg_A Possible 3-mercaptopyru 99.9 7.5E-22 2.6E-26 148.7 7.9 110 5-125 13-149 (373)
50 3aay_A Putative thiosulfate su 99.9 4.6E-22 1.6E-26 144.1 5.9 103 8-120 146-276 (277)
51 1whb_A KIAA0055; deubiqutinati 99.9 1.2E-21 4.1E-26 131.4 7.1 116 4-121 13-148 (157)
52 2eg4_A Probable thiosulfate su 99.8 7.5E-22 2.6E-26 139.7 5.9 97 7-119 122-230 (230)
53 2gwf_A Ubiquitin carboxyl-term 99.8 1.2E-21 4E-26 131.5 6.3 111 4-119 18-151 (157)
54 3tg1_B Dual specificity protei 99.8 2.2E-21 7.6E-26 130.2 5.6 106 4-115 9-144 (158)
55 2wlr_A Putative thiosulfate su 99.8 9.2E-21 3.1E-25 144.8 8.3 108 6-122 124-253 (423)
56 3ntd_A FAD-dependent pyridine 99.8 3.3E-21 1.1E-25 151.2 3.4 95 4-114 471-565 (565)
57 3ics_A Coenzyme A-disulfide re 99.8 1.4E-20 4.9E-25 148.5 2.6 96 4-114 487-582 (588)
58 2eg4_A Probable thiosulfate su 99.8 1.8E-19 6.3E-24 127.4 6.2 92 19-124 4-108 (230)
59 1okg_A Possible 3-mercaptopyru 99.8 4.2E-20 1.4E-24 139.2 3.0 93 19-120 172-295 (373)
60 3r2u_A Metallo-beta-lactamase 99.8 1.8E-20 6.2E-25 144.7 0.0 87 13-112 379-465 (466)
61 3utn_X Thiosulfate sulfurtrans 99.7 1.9E-17 6.4E-22 122.6 10.5 109 5-122 27-163 (327)
62 3tp9_A Beta-lactamase and rhod 99.7 2.5E-18 8.6E-23 132.8 5.3 102 4-120 271-373 (474)
63 3utn_X Thiosulfate sulfurtrans 99.7 3.5E-17 1.2E-21 121.2 3.4 100 8-116 186-319 (327)
64 3r2u_A Metallo-beta-lactamase 99.3 3.1E-13 1.1E-17 104.3 2.1 79 20-111 295-375 (466)
65 2f46_A Hypothetical protein; s 98.2 1.7E-06 5.9E-11 57.2 4.3 71 7-78 29-116 (156)
66 1v8c_A MOAD related protein; r 95.4 0.0014 4.9E-08 43.8 -1.3 25 22-50 122-146 (168)
67 4erc_A Dual specificity protei 95.0 0.1 3.5E-06 33.2 6.7 70 9-78 24-103 (150)
68 2img_A Dual specificity protei 94.5 0.27 9.4E-06 31.1 7.9 71 9-79 25-105 (151)
69 1xri_A AT1G05000; structural g 92.8 0.24 8.3E-06 31.6 5.4 72 9-80 22-109 (151)
70 1ywf_A Phosphotyrosine protein 91.7 0.23 7.7E-06 35.9 4.5 28 5-32 53-80 (296)
71 3rz2_A Protein tyrosine phosph 91.1 2.3 7.9E-05 28.2 8.8 72 8-80 48-134 (189)
72 2hcm_A Dual specificity protei 91.0 1.5 5E-05 28.3 7.6 56 22-78 39-104 (164)
73 2nt2_A Protein phosphatase sli 90.0 1.2 4.2E-05 28.0 6.4 19 61-79 79-97 (145)
74 3ezz_A Dual specificity protei 89.8 1.2 4.1E-05 28.0 6.2 18 61-78 79-96 (144)
75 1wrm_A Dual specificity phosph 88.7 2.2 7.6E-05 27.5 7.1 57 22-79 34-99 (165)
76 1zzw_A Dual specificity protei 88.7 3 0.0001 26.3 7.6 19 61-79 81-99 (149)
77 1yz4_A DUSP15, dual specificit 88.4 1.9 6.4E-05 27.7 6.5 19 61-79 82-100 (160)
78 3s4o_A Protein tyrosine phosph 88.0 1.5 5.1E-05 28.0 5.8 17 63-79 109-125 (167)
79 3rgo_A Protein-tyrosine phosph 87.5 1.4 5E-05 27.8 5.5 69 11-79 18-105 (157)
80 3s4e_A Dual specificity protei 87.4 2.1 7.2E-05 26.9 6.2 20 60-79 78-97 (144)
81 3f81_A Dual specificity protei 87.3 3.1 0.0001 27.2 7.1 17 63-79 115-131 (183)
82 2hxp_A Dual specificity protei 87.2 2.6 8.9E-05 26.9 6.6 57 22-79 33-101 (155)
83 2q05_A Late protein H1, dual s 87.0 3.1 0.00011 27.8 7.1 58 22-80 75-142 (195)
84 2e0t_A Dual specificity phosph 87.0 1.5 5.2E-05 27.7 5.4 17 62-78 84-100 (151)
85 2esb_A Dual specificity protei 86.6 4 0.00014 27.0 7.4 19 61-79 95-113 (188)
86 3cm3_A Late protein H1, dual s 85.1 2.4 8.2E-05 27.7 5.7 19 61-79 106-124 (176)
87 2wgp_A Dual specificity protei 84.3 3.8 0.00013 27.2 6.4 18 61-78 101-118 (190)
88 1yn9_A BVP, polynucleotide 5'- 84.1 3.5 0.00012 26.6 6.1 17 62-78 112-128 (169)
89 3rof_A Low molecular weight pr 83.6 1.7 5.8E-05 28.4 4.3 44 64-111 7-50 (158)
90 2r0b_A Serine/threonine/tyrosi 83.2 3.1 0.00011 26.3 5.5 19 61-79 88-106 (154)
91 1fpz_A Cyclin-dependent kinase 83.1 2.5 8.7E-05 28.5 5.3 20 60-79 130-149 (212)
92 2g6z_A Dual specificity protei 82.7 6.6 0.00023 26.7 7.2 20 60-79 80-99 (211)
93 1rxd_A Protein tyrosine phosph 80.1 8.6 0.0003 24.0 6.9 74 5-79 24-112 (159)
94 2jgn_A DBX, DDX3, ATP-dependen 79.7 10 0.00035 24.8 7.3 47 52-108 35-81 (185)
95 3n8i_A Low molecular weight ph 79.3 3.1 0.0001 27.0 4.4 44 63-110 5-49 (157)
96 2cwd_A Low molecular weight ph 78.7 2.3 7.9E-05 27.7 3.7 45 63-111 4-49 (161)
97 1d1q_A Tyrosine phosphatase (E 78.3 3.3 0.00011 26.9 4.4 43 64-110 8-52 (161)
98 2gi4_A Possible phosphotyrosin 77.9 2.2 7.7E-05 27.6 3.4 42 65-110 3-45 (156)
99 2pq5_A Dual specificity protei 77.7 10 0.00035 25.3 6.9 18 62-79 130-147 (205)
100 2j16_A SDP-1, tyrosine-protein 77.6 13 0.00044 24.6 8.3 20 60-79 114-133 (182)
101 1u2p_A Ptpase, low molecular w 76.7 3.8 0.00013 26.7 4.3 43 64-110 5-48 (163)
102 1ohe_A CDC14B, CDC14B2 phospha 76.5 3.9 0.00013 30.1 4.7 68 10-78 207-284 (348)
103 3jvi_A Protein tyrosine phosph 75.8 3.9 0.00013 26.6 4.1 43 64-110 5-48 (161)
104 1tvm_A PTS system, galactitol- 74.7 4 0.00014 24.9 3.8 31 64-98 22-52 (113)
105 2l2q_A PTS system, cellobiose- 73.0 7.9 0.00027 23.3 4.8 32 62-98 3-34 (109)
106 4etn_A LMPTP, low molecular we 73.0 4.1 0.00014 27.2 3.8 43 64-111 35-77 (184)
107 3gxh_A Putative phosphatase (D 71.7 11 0.00038 24.0 5.6 68 7-74 27-108 (157)
108 3emu_A Leucine rich repeat and 70.2 12 0.00041 23.9 5.5 19 61-79 85-103 (161)
109 1vkr_A Mannitol-specific PTS s 69.0 3.5 0.00012 25.7 2.6 32 62-97 12-43 (125)
110 4fak_A Ribosomal RNA large sub 65.8 13 0.00044 24.4 4.9 52 54-110 65-117 (163)
111 3v0d_A Voltage-sensor containi 65.4 33 0.0011 25.1 7.5 69 9-77 51-133 (339)
112 2oud_A Dual specificity protei 65.0 15 0.0005 23.9 5.2 19 61-79 85-103 (177)
113 1e2b_A Enzyme IIB-cellobiose; 64.7 13 0.00043 22.3 4.4 37 64-106 4-40 (106)
114 3czc_A RMPB; alpha/beta sandwi 63.7 5.3 0.00018 24.1 2.6 31 64-98 19-49 (110)
115 4etm_A LMPTP, low molecular we 62.7 11 0.00039 24.7 4.3 43 64-110 19-62 (173)
116 2y96_A Dual specificity phosph 61.1 22 0.00075 24.1 5.6 19 61-79 137-155 (219)
117 3d3k_A Enhancer of mRNA-decapp 57.5 13 0.00046 26.1 4.1 33 64-103 86-118 (259)
118 1jzt_A Hypothetical 27.5 kDa p 56.4 14 0.00046 25.8 4.0 48 64-118 59-117 (246)
119 2rb4_A ATP-dependent RNA helic 56.3 25 0.00084 22.5 5.1 37 62-108 33-69 (175)
120 3rss_A Putative uncharacterize 56.2 28 0.00095 27.0 6.0 50 62-118 51-110 (502)
121 3nme_A Ptpkis1 protein, SEX4 g 55.9 20 0.00068 25.6 4.9 18 62-79 105-122 (294)
122 4egs_A Ribose 5-phosphate isom 55.5 15 0.0005 24.3 3.8 44 63-111 34-77 (180)
123 3d3j_A Enhancer of mRNA-decapp 55.3 15 0.00051 26.6 4.1 33 64-103 133-165 (306)
124 1t5i_A C_terminal domain of A 55.2 38 0.0013 21.6 7.1 45 53-108 22-66 (172)
125 2i4i_A ATP-dependent RNA helic 54.8 57 0.002 23.5 8.6 47 52-108 265-311 (417)
126 2o8n_A APOA-I binding protein; 54.4 16 0.00053 25.9 4.0 33 64-103 80-112 (265)
127 3i32_A Heat resistant RNA depe 54.3 56 0.0019 23.2 7.1 46 52-108 18-63 (300)
128 2hjv_A ATP-dependent RNA helic 53.8 38 0.0013 21.2 7.1 37 62-108 34-70 (163)
129 3eaq_A Heat resistant RNA depe 53.7 46 0.0016 22.1 6.8 46 52-108 21-66 (212)
130 2p6n_A ATP-dependent RNA helic 53.3 44 0.0015 21.8 6.0 36 63-108 54-89 (191)
131 1to0_A Hypothetical UPF0247 pr 52.9 14 0.00047 24.3 3.3 52 54-110 61-113 (167)
132 1o6d_A Hypothetical UPF0247 pr 51.0 25 0.00085 23.0 4.3 84 12-112 23-109 (163)
133 3mmj_A MYO-inositol hexaphosph 49.1 14 0.00048 26.9 3.1 24 55-78 205-228 (314)
134 3n0a_A Tyrosine-protein phosph 47.4 83 0.0028 23.2 8.1 65 11-77 50-129 (361)
135 1ns5_A Hypothetical protein YB 46.3 40 0.0014 21.8 4.7 51 54-111 58-109 (155)
136 2c46_A MRNA capping enzyme; ph 46.1 38 0.0013 23.3 4.9 71 8-78 67-156 (241)
137 1fuk_A Eukaryotic initiation f 44.3 57 0.0019 20.4 7.0 46 52-108 20-65 (165)
138 2pfu_A Biopolymer transport EX 43.3 44 0.0015 19.1 4.3 55 43-104 38-92 (99)
139 3nbm_A PTS system, lactose-spe 43.2 31 0.0011 20.7 3.6 38 61-104 4-41 (108)
140 1pdo_A Mannose permease; phosp 39.7 65 0.0022 19.8 5.3 25 48-72 43-67 (135)
141 2i6j_A Ssoptp, sulfolobus solf 38.7 20 0.00067 22.4 2.3 22 11-32 19-40 (161)
142 1pp7_U 39 kDa initiator bindin 38.2 7.6 0.00026 24.2 0.2 28 91-118 86-113 (131)
143 1y80_A Predicted cobalamin bin 37.8 65 0.0022 21.3 5.0 36 63-104 88-123 (210)
144 2oyc_A PLP phosphatase, pyrido 37.8 1E+02 0.0034 21.4 6.2 63 1-74 1-64 (306)
145 3edo_A Flavoprotein, putative 36.9 36 0.0012 21.3 3.4 56 52-111 94-150 (151)
146 4grz_A Tyrosine-protein phosph 36.7 70 0.0024 22.4 5.2 18 60-77 203-220 (288)
147 2i2x_B MTAC, methyltransferase 35.8 81 0.0028 21.8 5.3 35 63-103 123-157 (258)
148 1fpr_A Protein-tyrosine phosph 35.1 51 0.0017 23.2 4.2 17 61-77 202-218 (284)
149 1h3f_A Tyrosyl-tRNA synthetase 33.7 42 0.0014 25.5 3.8 50 62-112 34-84 (432)
150 3b7o_A Tyrosine-protein phosph 33.3 81 0.0028 22.6 5.1 17 61-77 237-253 (316)
151 1c4o_A DNA nucleotide excision 33.1 1.4E+02 0.0047 23.8 6.8 38 60-107 436-473 (664)
152 2b49_A Protein tyrosine phosph 33.1 24 0.00083 25.0 2.3 28 50-77 196-223 (287)
153 2d7d_A Uvrabc system protein B 32.8 1.5E+02 0.0053 23.5 7.1 44 54-107 436-479 (661)
154 1r6u_A Tryptophanyl-tRNA synth 32.7 61 0.0021 24.7 4.5 55 58-113 101-157 (437)
155 1p8a_A Protein tyrosine phosph 32.6 12 0.00041 23.7 0.5 39 64-110 5-43 (146)
156 2yxb_A Coenzyme B12-dependent 32.6 65 0.0022 20.6 4.1 36 62-103 17-52 (161)
157 2a33_A Hypothetical protein; s 32.6 90 0.0031 21.2 5.0 30 64-97 14-46 (215)
158 4e3q_A Pyruvate transaminase; 32.3 29 0.00099 26.5 2.7 51 60-111 124-174 (473)
159 1d5r_A Phosphoinositide phosph 31.9 1.4E+02 0.0048 21.3 8.0 16 62-77 110-125 (324)
160 3qua_A Putative uncharacterize 31.9 1E+02 0.0035 20.6 5.1 29 64-97 23-54 (199)
161 3gh1_A Predicted nucleotide-bi 30.8 86 0.003 24.1 5.0 35 62-98 145-179 (462)
162 1oyw_A RECQ helicase, ATP-depe 29.8 87 0.003 24.0 5.1 37 62-108 235-271 (523)
163 2hc1_A Receptor-type tyrosine- 29.7 29 0.001 24.6 2.2 17 61-77 216-232 (291)
164 2hl0_A Threonyl-tRNA synthetas 29.5 1.1E+02 0.0038 19.5 7.2 65 53-119 64-134 (143)
165 3r4v_A Putative uncharacterize 29.3 1.2E+02 0.004 22.1 5.2 49 53-105 71-119 (315)
166 3trd_A Alpha/beta hydrolase; c 28.9 1.1E+02 0.0037 19.2 5.4 36 63-104 30-70 (208)
167 3kwp_A Predicted methyltransfe 28.6 75 0.0026 22.6 4.2 106 6-118 29-141 (296)
168 4ao9_A Beta-phenylalanine amin 28.3 98 0.0034 23.5 5.0 43 63-112 142-184 (454)
169 2wmy_A WZB, putative acid phos 27.5 64 0.0022 20.3 3.4 19 64-82 9-27 (150)
170 4ea9_A Perosamine N-acetyltran 27.3 64 0.0022 21.4 3.5 49 62-120 11-59 (220)
171 1xti_A Probable ATP-dependent 27.0 1.7E+02 0.0057 20.7 7.5 46 52-108 240-285 (391)
172 1jl3_A Arsenate reductase; alp 27.0 46 0.0016 20.6 2.6 38 64-109 4-41 (139)
173 1o1x_A Ribose-5-phosphate isom 26.8 1.1E+02 0.0039 19.7 4.4 54 11-74 28-81 (155)
174 3i36_A Vascular protein tyrosi 26.6 24 0.00082 25.8 1.3 17 61-77 235-251 (342)
175 3ezx_A MMCP 1, monomethylamine 26.6 1.3E+02 0.0044 20.2 5.0 35 63-103 92-126 (215)
176 3i5x_A ATP-dependent RNA helic 26.1 2.1E+02 0.0071 21.7 6.6 41 61-108 337-377 (563)
177 2v1x_A ATP-dependent DNA helic 26.1 2.4E+02 0.0081 22.1 10.3 37 62-108 266-302 (591)
178 3rh0_A Arsenate reductase; oxi 26.0 56 0.0019 20.7 2.9 19 64-82 21-39 (148)
179 4h3k_B RNA polymerase II subun 25.9 93 0.0032 21.3 4.0 31 64-103 26-56 (214)
180 3ohg_A Uncharacterized protein 25.5 51 0.0018 23.5 2.8 21 83-107 223-243 (285)
181 3dkr_A Esterase D; alpha beta 25.3 1.1E+02 0.0036 19.5 4.3 36 63-104 21-56 (251)
182 3pey_A ATP-dependent RNA helic 25.3 1.1E+02 0.0039 21.5 4.8 37 62-108 242-278 (395)
183 3sho_A Transcriptional regulat 25.3 1.3E+02 0.0046 19.0 6.3 43 55-105 31-73 (187)
184 2b3o_A Tyrosine-protein phosph 25.2 1.7E+02 0.006 22.4 6.0 18 61-78 444-461 (532)
185 3sty_A Methylketone synthase 1 25.2 1E+02 0.0035 19.9 4.3 9 95-104 38-46 (267)
186 3qit_A CURM TE, polyketide syn 24.9 1E+02 0.0035 19.9 4.3 8 95-103 52-59 (286)
187 2wja_A Putative acid phosphata 24.8 75 0.0026 20.6 3.4 37 64-109 27-63 (168)
188 3lub_A Putative creatinine ami 24.7 1.2E+02 0.0042 21.0 4.6 39 36-74 82-122 (254)
189 1wp9_A ATP-dependent RNA helic 24.7 2E+02 0.0068 20.7 6.8 35 61-105 359-393 (494)
190 1ccw_A Protein (glutamate muta 24.7 1.3E+02 0.0044 18.5 4.8 34 64-103 4-37 (137)
191 2zxr_A Single-stranded DNA spe 24.4 1.6E+02 0.0053 23.8 5.7 53 44-102 53-105 (666)
192 1r6t_A Tryptophanyl-tRNA synth 24.4 55 0.0019 25.2 3.0 53 60-113 150-204 (477)
193 1ydh_A AT5G11950; structural g 24.4 1.6E+02 0.0054 20.0 5.0 11 64-74 10-20 (216)
194 2bn8_A CEDA, cell division act 24.2 28 0.00096 19.6 1.0 49 61-119 14-62 (87)
195 3bed_A PTS system, IIA compone 24.1 1.3E+02 0.0046 18.5 5.5 23 49-72 48-70 (142)
196 3pe6_A Monoglyceride lipase; a 23.9 1.1E+02 0.0036 20.1 4.2 36 63-104 41-76 (303)
197 2l17_A Synarsc, arsenate reduc 23.6 66 0.0023 19.8 2.8 36 65-108 6-41 (134)
198 2fek_A Low molecular weight pr 23.5 88 0.003 20.2 3.5 37 64-109 23-59 (167)
199 3fht_A ATP-dependent RNA helic 23.5 1.3E+02 0.0043 21.5 4.8 37 62-108 265-301 (412)
200 3no4_A Creatininase, creatinin 23.3 1.6E+02 0.0056 20.7 5.1 39 36-74 91-131 (267)
201 2j0s_A ATP-dependent RNA helic 23.2 1.3E+02 0.0045 21.6 4.8 36 63-108 276-311 (410)
202 3sqw_A ATP-dependent RNA helic 23.1 2.5E+02 0.0086 21.5 6.6 41 61-108 286-326 (579)
203 2j5b_A Tyrosyl-tRNA synthetase 23.1 81 0.0028 23.1 3.6 49 63-112 38-87 (348)
204 1hv8_A Putative ATP-dependent 23.0 1.6E+02 0.0054 20.5 5.1 37 62-108 237-273 (367)
205 1s2m_A Putative ATP-dependent 23.0 1.3E+02 0.0043 21.5 4.7 37 62-108 257-293 (400)
206 3ono_A Ribose/galactose isomer 22.9 1.6E+02 0.0054 20.1 4.7 55 11-74 23-78 (214)
207 1z5z_A Helicase of the SNF2/RA 22.9 1.5E+02 0.0052 20.5 4.9 39 61-108 110-148 (271)
208 4f0j_A Probable hydrolytic enz 22.8 1.2E+02 0.0041 20.1 4.3 48 63-110 73-126 (315)
209 3f41_A Phytase; tandem repeat, 22.8 71 0.0024 25.6 3.4 23 56-78 523-545 (629)
210 2g3w_A YAEQ protein, hypotheti 22.4 1.4E+02 0.0047 19.9 4.3 14 61-74 97-110 (182)
211 1jln_A STEP-like ptpase, prote 22.3 41 0.0014 23.9 1.8 17 61-77 220-236 (297)
212 3ghf_A Septum site-determining 22.2 1.4E+02 0.0048 18.1 4.2 53 61-120 45-102 (120)
213 3p9y_A CG14216, LD40846P; phos 21.9 1.3E+02 0.0043 20.3 4.0 31 64-103 10-40 (198)
214 3kkj_A Amine oxidase, flavin-c 21.8 70 0.0024 20.6 2.9 29 65-104 4-32 (336)
215 1jf8_A Arsenate reductase; ptp 21.8 81 0.0028 19.3 3.0 38 64-109 4-41 (131)
216 3rm3_A MGLP, thermostable mono 21.7 1.3E+02 0.0043 19.7 4.2 10 64-73 40-49 (270)
217 2fuk_A XC6422 protein; A/B hyd 21.7 1.6E+02 0.0054 18.5 5.1 38 62-104 35-76 (220)
218 2yxn_A Tyrosyl-tRNA synthetase 21.6 1E+02 0.0034 22.3 3.8 47 64-111 32-79 (322)
219 3b55_A Succinoglycan biosynthe 21.6 2.7E+02 0.0092 21.1 6.6 45 62-108 73-117 (451)
220 2shp_A SHP-2, SYP, SHPTP-2; ty 21.6 1.6E+02 0.0056 22.5 5.2 17 61-77 450-466 (525)
221 3ps5_A Tyrosine-protein phosph 21.2 1.6E+02 0.0056 23.0 5.2 17 61-77 444-460 (595)
222 2vvp_A Ribose-5-phosphate isom 21.0 1.8E+02 0.0061 18.9 4.8 54 12-74 20-73 (162)
223 4atq_A 4-aminobutyrate transam 20.9 1.2E+02 0.0041 22.9 4.3 41 64-111 125-165 (456)
224 2cya_A Tyrosyl-tRNA synthetase 20.5 71 0.0024 23.5 2.8 51 62-113 32-82 (364)
225 2cyc_A Tyrosyl-tRNA synthetase 20.4 64 0.0022 23.9 2.6 51 62-113 30-81 (375)
226 2gjh_A Designed protein; oblig 20.4 1E+02 0.0035 15.8 3.6 27 76-102 11-37 (62)
227 4gl2_A Interferon-induced heli 20.2 2E+02 0.0067 22.6 5.5 38 63-106 400-439 (699)
228 3bjr_A Putative carboxylestera 20.1 2E+02 0.0068 19.1 5.1 38 62-104 48-87 (283)
229 3f41_A Phytase; tandem repeat, 20.0 80 0.0027 25.3 3.1 23 56-78 225-247 (629)
No 1
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.97 E-value=2.9e-31 Score=177.70 Aligned_cols=124 Identities=72% Similarity=1.211 Sum_probs=105.0
Q ss_pred CCccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeC-CCCCCcHHHH
Q 032540 3 RSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCA-LSQVRGPTCA 81 (138)
Q Consensus 3 ~~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~-~g~~~~~~~~ 81 (138)
..+..|+++++.++++.++.+|||||+++||..||||||+|||+..+...+.++...++++++||+||+ +|. ++..++
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~~~~l~~~~~~~~~iVvyC~~~G~-rs~~aa 103 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHSALSQV-RGPTCA 103 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTTHHHHHHTCCSCCEEEESSSCCSS-SHHHHH
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHHHHHHHHHhcCCCCEEEEEcCCCCc-chHHHH
Confidence 367889999999998777899999999999999999999999999988777777666678899999999 776 777777
Q ss_pred HHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcccC
Q 032540 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPFFS 127 (138)
Q Consensus 82 ~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~~ 127 (138)
..+...|...|+..||++|++|+||+.+|.++|+|+++....++++
T Consensus 104 ~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~c~~ 149 (152)
T 1t3k_A 104 RRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPCKG 149 (152)
T ss_dssp HHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSCSSCSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCCCCCCC
Confidence 6555444444566899999999999999999999999987776654
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.97 E-value=3.6e-31 Score=166.52 Aligned_cols=101 Identities=23% Similarity=0.423 Sum_probs=85.5
Q ss_pred ccccCHHHHHhhhC-CCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 5 ~~~i~~~~~~~~l~-~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
++.||++|+.+++. +++++|||||++.||..||||||+|||+++|...+.++ +++++||+||.+|. |+..++
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~ivv~C~~G~-rS~~aa-- 73 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSF----NKNEIYYIVCAGGV-RSAKVV-- 73 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGC----CTTSEEEEECSSSS-HHHHHH--
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhhhh----cCCCeEEEECCCCH-HHHHHH--
Confidence 46899999999875 44689999999999999999999999999987766554 88999999999987 666655
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
..|. +.||++ +.|.||+.+|.++|+|+++
T Consensus 74 --~~L~----~~G~~~-~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 74 --EYLE----ANGIDA-VNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp --HHHH----TTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred --HHHH----HcCCCE-EEecChHHHHHHCCCccee
Confidence 4554 499965 5799999999999999875
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.96 E-value=2.8e-30 Score=162.31 Aligned_cols=101 Identities=23% Similarity=0.420 Sum_probs=86.6
Q ss_pred ccccCHHHHHhhh-CCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 5 ISYISGSQLLSLK-RRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 5 ~~~i~~~~~~~~l-~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
++.|+++++.+++ +.++.+|||||++.||..||||||+|+|+..|...+..+ +++++||+||.+|. ++..++
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~iv~yC~~g~-rs~~a~-- 73 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSF----NKNEIYYIVCAGGV-RSAKVV-- 73 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGC----CTTSEEEEECSSSS-HHHHHH--
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhC----CCCCeEEEECCCCh-HHHHHH--
Confidence 4679999999988 456799999999999999999999999999887665554 78899999999986 665554
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
..|. ..|| +|++|+||+.+|.++|+|+++
T Consensus 74 --~~L~----~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 74 --EYLE----ANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp --HHHH----TTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred --HHHH----HCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 4453 4999 999999999999999999875
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.96 E-value=2.9e-30 Score=161.51 Aligned_cols=99 Identities=21% Similarity=0.388 Sum_probs=84.7
Q ss_pred ccccCHHHHHhhh-CCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 5 ISYISGSQLLSLK-RRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 5 ~~~i~~~~~~~~l-~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
++.|+++++.+++ ++++++|||||++.||..||||||+|+|+..+...+..+ +++++||+||.+|. ++..++
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~ivvyC~~g~-rs~~a~-- 73 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYF----NDNETYYIICKAGG-RSAQVV-- 73 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGGGS----CTTSEEEEECSSSH-HHHHHH--
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhC----CCCCcEEEEcCCCc-hHHHHH--
Confidence 4679999999998 456799999999999999999999999999887665554 78899999999886 555554
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCc
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPV 117 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~ 117 (138)
..|. ..|| +|++|+||+.+|.++|+|+
T Consensus 74 --~~L~----~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 74 --QYLE----QNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp --HHHH----TTTC-EEEEETTHHHHHCSSSCBC
T ss_pred --HHHH----HCCC-CEEEecccHHHHHHcCCCC
Confidence 4453 4999 9999999999999999985
No 5
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.96 E-value=3.7e-30 Score=163.16 Aligned_cols=105 Identities=23% Similarity=0.365 Sum_probs=86.2
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHH
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~ 84 (138)
++.|+++++.++++. ++|||||++.||..||||||+|+|+.++...+..+ +++++||+||.+|. ++..++
T Consensus 3 ~~~is~~el~~~l~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~ivvyC~~G~-rs~~aa--- 72 (108)
T 3gk5_A 3 YRSINAADLYENIKA--YTVLDVREPFELIFGSIANSINIPISELREKWKIL----ERDKKYAVICAHGN-RSAAAV--- 72 (108)
T ss_dssp CCEECHHHHHHTTTT--CEEEECSCHHHHTTCBCTTCEECCHHHHHHHGGGS----CTTSCEEEECSSSH-HHHHHH---
T ss_pred ccEeCHHHHHHHHcC--CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhC----CCCCeEEEEcCCCc-HHHHHH---
Confidence 567999999999875 89999999999999999999999998876655444 78899999999887 555554
Q ss_pred HHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 85 ~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
..|+ ..|| +|++|+||+.+|.++|+|++++...|.
T Consensus 73 -~~L~----~~G~-~v~~l~GG~~~W~~~~~~~~~~~~~~~ 107 (108)
T 3gk5_A 73 -EFLS----QLGL-NIVDVEGGIQSWIEEGYPVVLEHHHHH 107 (108)
T ss_dssp -HHHH----TTTC-CEEEETTHHHHHHHTTCCCBCC-----
T ss_pred -HHHH----HcCC-CEEEEcCcHHHHHHcCCCCCCCCCCcC
Confidence 4453 4999 999999999999999999998776664
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.95 E-value=1.9e-29 Score=159.76 Aligned_cols=104 Identities=17% Similarity=0.338 Sum_probs=88.6
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
.++.|+++++.++++.++.+|||||++.||..||||||+|+|+..+...+.. ++++++||+||++|. ++..++
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~----l~~~~~ivvyc~~g~-rs~~a~-- 75 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRD----NDFDTPVMVMCYHGN-SSKGAA-- 75 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHHHHHHHHHH----SCTTSCEEEECSSSS-HHHHHH--
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHHHHHHh----cCCCCCEEEEcCCCc-hHHHHH--
Confidence 4678999999999887679999999999999999999999999887766554 478899999999987 665554
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccC
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
..|+. .||++|++|+||+.+|.++ +|++.+.
T Consensus 76 --~~L~~----~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 76 --QYLLQ----QGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp --HHHHH----HTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred --HHHHH----cCCceEEEecCCHHHHHHh-CCccccc
Confidence 44443 8999999999999999999 9998753
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.95 E-value=5.9e-29 Score=157.08 Aligned_cols=103 Identities=23% Similarity=0.383 Sum_probs=77.3
Q ss_pred HHHHhhhC--CCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHH
Q 032540 11 SQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYL 88 (138)
Q Consensus 11 ~~~~~~l~--~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L 88 (138)
+++.+++. .++++|||||++.||..||||||+|||+.++...+. ..++++++||+||.+|. ++..++ ..|
T Consensus 1 eel~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~l~~~~~ivvyc~~g~-rs~~a~----~~L 72 (106)
T 3hix_A 1 MVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SSLEKSRDIYVYGAGDE-QTSQAV----NLL 72 (106)
T ss_dssp ------------CCEEEECSCHHHHHTCEETTCEECCGGGHHHHHH---HHSCTTSCEEEECSSHH-HHHHHH----HHH
T ss_pred ChHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHHHHH---hcCCCCCeEEEEECCCC-hHHHHH----HHH
Confidence 35677776 346899999999999999999999999998765442 33478899999999886 455554 445
Q ss_pred HHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 89 DEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 89 ~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
. ..||++|++|+||+.+|.++|+|+++....|.
T Consensus 73 ~----~~G~~~v~~l~GG~~~W~~~g~~~~~~~~~~~ 105 (106)
T 3hix_A 73 R----SAGFEHVSELKGGLAAWKAIGGPTELEHHHHH 105 (106)
T ss_dssp H----HTTCSCEEECTTHHHHHHHTTCCEEECCEEEC
T ss_pred H----HcCCcCEEEecCCHHHHHHCCCCCCCCCCCCC
Confidence 4 49999999999999999999999998766554
No 8
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.95 E-value=3e-28 Score=160.44 Aligned_cols=106 Identities=22% Similarity=0.398 Sum_probs=89.2
Q ss_pred CccccCHHHHHhhhC-CCCeEEEEecCCCccCC-Cc--cccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHH
Q 032540 4 SISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GH--ITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~-~~~~~liDvR~~~e~~~-gh--ipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~ 79 (138)
.+..|+++++.++++ .++.+|||||++.||.. || ||||+|||+..+.... ....++++++|||||.+|. ++..
T Consensus 21 ~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~~--~~~~l~~~~~ivvyC~~G~-rS~~ 97 (137)
T 1qxn_A 21 DMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLL--AKSGLDPEKPVVVFCKTAA-RAAL 97 (137)
T ss_dssp SSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHHH--HHHCCCTTSCEEEECCSSS-CHHH
T ss_pred cCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhHH--hhccCCCCCeEEEEcCCCc-HHHH
Confidence 567899999999987 66799999999999999 99 9999999999886511 1233578899999999998 6666
Q ss_pred HHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCcccc
Q 032540 80 CAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 80 ~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
++ ..|.. .||++|++|+||+.+|.++|+|++++
T Consensus 98 aa----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~~ 130 (137)
T 1qxn_A 98 AG----KTLRE----YGFKTIYNSEGGMDKWLEEGLPSLDR 130 (137)
T ss_dssp HH----HHHHH----HTCSCEEEESSCHHHHHHTTCCEECC
T ss_pred HH----HHHHH----cCCcceEEEcCcHHHHHHCCCCcccc
Confidence 65 44433 89999999999999999999999874
No 9
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.95 E-value=2.3e-28 Score=160.98 Aligned_cols=110 Identities=23% Similarity=0.409 Sum_probs=87.0
Q ss_pred CccccCHHHHHhhhC--CCCeEEEEecCCCccCC-CccccceecCCcchhHHHHHH----HHHhcCCCeEEEEeCCCCCC
Q 032540 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYD-GHITGSLHYPSDSFTDKIFDL----IQEVRGKDTLVFHCALSQVR 76 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~--~~~~~liDvR~~~e~~~-ghipgAi~ip~~~l~~~~~~~----~~~~~~~~~iv~~c~~g~~~ 76 (138)
.+..|+++++.++++ .++.+|||||++.||.. ||||||+|||+..+...+... ...++++++||+||++|. +
T Consensus 20 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~ivvyC~~G~-r 98 (139)
T 2hhg_A 20 SIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGL-R 98 (139)
T ss_dssp TSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTTCCGGGGSSSEEEEECSSSH-H
T ss_pred hcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchhhhccCCCCCeEEEECCCCh-H
Confidence 457899999999987 56799999999999999 999999999998876543211 112478899999999986 5
Q ss_pred cHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCC
Q 032540 77 GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (138)
Q Consensus 77 ~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (138)
+..++ ..|+ ..||++|++|+||+.+|..+|+|++++..
T Consensus 99 s~~a~----~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 99 SALAA----KTAQ----DMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp HHHHH----HHHH----HHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred HHHHH----HHHH----HcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 55544 4454 38999999999999999999999988643
No 10
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.94 E-value=4.4e-28 Score=160.34 Aligned_cols=103 Identities=23% Similarity=0.404 Sum_probs=85.7
Q ss_pred cCHHHHHhhhCC--CCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHH
Q 032540 8 ISGSQLLSLKRR--PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLA 85 (138)
Q Consensus 8 i~~~~~~~~l~~--~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~ 85 (138)
||++++.++++. ++++|||||++.||..||||||+|||+..|...+. ..++++++|||||.+|. ++..++
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~---~~l~~~~~ivvyC~~g~-rs~~aa---- 73 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRAS---SSLEKSRDIYVYGAGDE-QTSQAV---- 73 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHHHH---TTSCTTSEEEEECSSHH-HHHHHH----
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHHHH---hcCCCCCeEEEEECCCh-HHHHHH----
Confidence 789999999873 35999999999999999999999999988765442 23578899999999876 555544
Q ss_pred HHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCC
Q 032540 86 NYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (138)
Q Consensus 86 ~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (138)
..|. ..||++|++|+||+.+|.++|+|+++...
T Consensus 74 ~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 74 NLLR----SAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp HHHH----HTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred HHHH----HcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 4454 48999999999999999999999998764
No 11
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.94 E-value=4.2e-28 Score=158.14 Aligned_cols=106 Identities=21% Similarity=0.298 Sum_probs=84.6
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcch--------hHHHHHHHHHhcCCCeEEEEeCCCCC
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSF--------TDKIFDLIQEVRGKDTLVFHCALSQV 75 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l--------~~~~~~~~~~~~~~~~iv~~c~~g~~ 75 (138)
....|+++++.++++ ++.+|||||++.||..||||||+|||+..+ ...+..+...++++++||+||.+|.
T Consensus 16 ~~~~is~~e~~~~l~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~- 93 (129)
T 1tq1_A 16 VPSSVSVTVAHDLLL-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGG- 93 (129)
T ss_dssp CCEEEEHHHHHHHHH-HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCS-
T ss_pred CCcccCHHHHHHHhc-CCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCc-
Confidence 567899999999887 468999999999999999999999998322 1233344334578899999999987
Q ss_pred CcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 76 RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 76 ~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
++..++ ..|.. .||++|++|+||+.+|..+|+|+++
T Consensus 94 rs~~aa----~~L~~----~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 94 RSIKAT----TDLLH----AGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp HHHHHH----HHHHH----HHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred HHHHHH----HHHHH----cCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 665555 44433 8999999999999999999999863
No 12
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.94 E-value=1.1e-27 Score=158.88 Aligned_cols=106 Identities=17% Similarity=0.216 Sum_probs=87.4
Q ss_pred cccCHHHHHhhhCCC--CeEEEEecCCCccCCCccccceecCCcchhH-HHHHHHHHhcCCCeEEEEeCCCC-CCcHHHH
Q 032540 6 SYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLIQEVRGKDTLVFHCALSQ-VRGPTCA 81 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~--~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-~~~~~~~~~~~~~~iv~~c~~g~-~~~~~~~ 81 (138)
..|+++++.+++..+ +++|||||++.||..||||||+|||+..+.. .+. .++++++|||||.+|. .++..++
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~----~l~~~~~ivvyC~~g~~~rs~~aa 91 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTK----RLSKEKVIITYCWGPACNGATKAA 91 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTTT----TCCTTSEEEEECSCTTCCHHHHHH
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHHh----hCCCCCeEEEEECCCCccHHHHHH
Confidence 358999999998754 7999999999999999999999999988763 333 3478899999999984 3665554
Q ss_pred HHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCc
Q 032540 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (138)
Q Consensus 82 ~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (138)
..|+ ..|| +|++|+||+.+|.++|+|++++...+
T Consensus 92 ----~~L~----~~G~-~v~~l~GG~~~W~~~g~pv~~~~~~~ 125 (144)
T 3nhv_A 92 ----AKFA----QLGF-RVKELIGGIEYWRKENGEVEGTLGAK 125 (144)
T ss_dssp ----HHHH----HTTC-EEEEEESHHHHHHHTTCCCBSSSGGG
T ss_pred ----HHHH----HCCC-eEEEeCCcHHHHHHCCCCccCCCCCC
Confidence 4454 4999 69999999999999999999876544
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.94 E-value=3.3e-27 Score=152.90 Aligned_cols=102 Identities=21% Similarity=0.339 Sum_probs=83.9
Q ss_pred cccCHHHHHhhhCCC--CeEEEEecCCCcc-CCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCC-cHHHH
Q 032540 6 SYISGSQLLSLKRRP--NIAVIDVRDDERS-YDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVR-GPTCA 81 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~--~~~liDvR~~~e~-~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~-~~~~~ 81 (138)
..|+++++.++++.+ +++|||||++.|| ..||||||+|||+.+|...+.. ++++++||+||.+|.+. +..++
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~~~----l~~~~~ivvyC~~g~r~~s~~a~ 90 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRIGE----LDPAKTYVVYDWTGGTTLGKTAL 90 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHGGG----SCTTSEEEEECSSSSCSHHHHHH
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHHhc----CCCCCeEEEEeCCCCchHHHHHH
Confidence 459999999998753 4999999999998 9999999999999887655544 47889999999999842 44454
Q ss_pred HHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCcccc
Q 032540 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 82 ~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
..|. ..||+ |++|+||+.+|..+|+|+.+.
T Consensus 91 ----~~L~----~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 91 ----LVLL----SAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp ----HHHH----HHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred ----HHHH----HcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 4443 38996 999999999999999998764
No 14
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.7e-27 Score=155.27 Aligned_cols=107 Identities=21% Similarity=0.360 Sum_probs=86.2
Q ss_pred CccccCHHHHHhhhC--CCCeEEEEecCCCccCCCccccceecCCcchhHHH----HHHHH-----HhcCCCeEEEEeCC
Q 032540 4 SISYISGSQLLSLKR--RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKI----FDLIQ-----EVRGKDTLVFHCAL 72 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~--~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~----~~~~~-----~~~~~~~iv~~c~~ 72 (138)
.+..|+++++.++++ .++++|||||++.||..||||||+|+|+..+...+ .++.+ .++++++||+||.+
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~ 100 (139)
T 3d1p_A 21 NIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCAS 100 (139)
T ss_dssp CCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSS
T ss_pred CcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCC
Confidence 567899999999986 35799999999999999999999999998775422 12222 13578999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 73 SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 73 g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
|. ++..++ ..|. ..||++|++|+||+.+|..+|+|+.+
T Consensus 101 G~-rs~~aa----~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 101 GK-RGGEAQ----KVAS----SHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SH-HHHHHH----HHHH----TTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred Cc-hHHHHH----HHHH----HcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 87 555554 4443 48999999999999999999999764
No 15
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.93 E-value=8.3e-28 Score=148.67 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=72.3
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHH
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~ 84 (138)
++.|+++++.++++. +.+|||||++.||..||||||+|+|+.++...+.. +++ ++||+||++|. ++..++
T Consensus 1 ~~~is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~~~----l~~-~~ivvyC~~g~-rs~~a~--- 70 (94)
T 1wv9_A 1 MRKVRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGEHG----LPR-RPLLLVCEKGL-LSQVAA--- 70 (94)
T ss_dssp -CEECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTTCCC----CCS-SCEEEECSSSH-HHHHHH---
T ss_pred CCcCCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHHHHh----CCC-CCEEEEcCCCC-hHHHHH---
Confidence 357899999998875 68999999999999999999999998877654433 367 99999999987 555554
Q ss_pred HHHHHHhhhhCCCccEEEeccchhhhhhCC
Q 032540 85 ANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (138)
Q Consensus 85 ~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g 114 (138)
..|.. .||+ |++|+||+.+|.++|
T Consensus 71 -~~L~~----~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 71 -LYLEA----EGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp -HHHHH----HTCC-EEEETTGGGCC----
T ss_pred -HHHHH----cCCc-EEEEcccHHHHHhCc
Confidence 44443 8998 999999999998765
No 16
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.93 E-value=2.1e-27 Score=150.85 Aligned_cols=102 Identities=17% Similarity=0.202 Sum_probs=82.7
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHH
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRL 84 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~ 84 (138)
...|+++++ ..++.+|||||++.||..||||||+|+|+.++...+... .++++++||+||.+|. ++..++
T Consensus 4 ~~~is~~el----~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~~~~--~~~~~~~ivvyC~~G~-rs~~aa--- 73 (110)
T 2k0z_A 4 DYAISLEEV----NFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLADFL--SQHKDKKVLLHCRAGR-RALDAA--- 73 (110)
T ss_dssp TTEEETTTC----CGGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHHHHH--HSCSSSCEEEECSSSH-HHHHHH---
T ss_pred eeeeCHHHh----ccCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHHHhc--ccCCCCEEEEEeCCCc-hHHHHH---
Confidence 445777776 345689999999999999999999999999987765542 3478899999999886 555554
Q ss_pred HHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCC
Q 032540 85 ANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (138)
Q Consensus 85 ~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (138)
..|. ..||++ ++|+||+.+|.++|+|++++..
T Consensus 74 -~~L~----~~G~~~-~~l~GG~~~W~~~g~p~~~~~~ 105 (110)
T 2k0z_A 74 -KSMH----ELGYTP-YYLEGNVYDFEKYGFRMVYDDT 105 (110)
T ss_dssp -HHHH----HTTCCC-EEEESCGGGTTTTTCCCBCCCS
T ss_pred -HHHH----HCCCCE-EEecCCHHHHHHCCCcEecCCC
Confidence 4454 499999 9999999999999999987654
No 17
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.93 E-value=1.1e-25 Score=150.41 Aligned_cols=111 Identities=30% Similarity=0.413 Sum_probs=86.9
Q ss_pred CccccCHHHHHhhhCCC----CeEEEEecCCCccCCCccccceecCCcchhH-HHHHHHHHhc--CCCeEEEEe-CCCCC
Q 032540 4 SISYISGSQLLSLKRRP----NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-KIFDLIQEVR--GKDTLVFHC-ALSQV 75 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~----~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-~~~~~~~~~~--~~~~iv~~c-~~g~~ 75 (138)
.++.|+++++.++++.+ +++|||||++ ||..||||||+|||+..+.. .+..+...+. ..+.||+|| .+|.
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~~~~~l~~~l~~~~~~~vV~yC~~sg~- 80 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEEMYEKLAKTLFEEKKELAVFHCAQSLV- 80 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHHHHHHHHHHHHHTTCCEEEEECSSSSS-
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHHHHHHHHHHhcccCCCEEEEEcCCCCC-
Confidence 56789999999998763 7999999999 99999999999999988764 4444443332 334677789 6776
Q ss_pred CcHHHHHHHHHHHHHhhhhCCC--ccEEEeccchhhhhhCCCCcccc
Q 032540 76 RGPTCAKRLANYLDEVKEDTGI--NSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 76 ~~~~~~~~~~~~L~~~l~~~G~--~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
++..++.++...|. ..|| .+|++|+||+.+|..+|.+++.+
T Consensus 81 rs~~aa~~~~~~L~----~~G~~~~~v~~L~GG~~~W~~~g~~~~~~ 123 (152)
T 2j6p_A 81 RAPKGANRFALAQK----KLGYVLPAVYVLRGGWEAFYHMYGDVRPD 123 (152)
T ss_dssp HHHHHHHHHHHHHH----HHTCCCSEEEEETTHHHHHHHHHTTTCGG
T ss_pred ccHHHHHHHHHHHH----HcCCCCCCEEEEcCcHHHHHHHcCCCCCC
Confidence 77777655555554 4897 59999999999999999988764
No 18
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.92 E-value=1.5e-26 Score=157.15 Aligned_cols=111 Identities=26% Similarity=0.471 Sum_probs=86.6
Q ss_pred CccccCHHHHHhhhCCC-------CeEEEEecCCCccCCCccccceecCCcchhHH---HHHHHHHhcC-------CCeE
Q 032540 4 SISYISGSQLLSLKRRP-------NIAVIDVRDDERSYDGHITGSLHYPSDSFTDK---IFDLIQEVRG-------KDTL 66 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~-------~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~---~~~~~~~~~~-------~~~i 66 (138)
.++.|+++++.+++..+ +++|||||+ .||..||||||+|||+.++... +.++.+.+.. +++|
T Consensus 29 ~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~~~l~~l~~~~~~~~~~~~~~~~I 107 (169)
T 3f4a_A 29 NVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLEKQADGRGALNV 107 (169)
T ss_dssp SEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCHHHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhcccccHHHHHHHHHhhcccccCCCeE
Confidence 56789999999998743 489999999 8999999999999999887654 5555433221 3699
Q ss_pred EEEeCCCCCCcHHHHHHHHHHHHHhhhhCC--CccEEEeccchhhhhhCCCCccc
Q 032540 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTG--INSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 67 v~~c~~g~~~~~~~~~~~~~~L~~~l~~~G--~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
||||.+|..|+..++.++...| ...| +.+|++|+||+.+|.+++.|...
T Consensus 108 VvyC~sG~~Rs~~aa~~l~~~L----~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 108 IFHCMLSQQRGPSAAMLLLRSL----DTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp EEECSSSSSHHHHHHHHHHHTC----CHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred EEEeCCCCCcHHHHHHHHHHHH----HHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 9999998557877775554333 3356 57999999999999999887654
No 19
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=1.3e-25 Score=149.48 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=82.0
Q ss_pred ccccCHHHHHhhhCC-CCeEEEEecCCCccCC-Ccc------ccceecCCcch-----hHHHHHHHHH-----hcCCCeE
Q 032540 5 ISYISGSQLLSLKRR-PNIAVIDVRDDERSYD-GHI------TGSLHYPSDSF-----TDKIFDLIQE-----VRGKDTL 66 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~-~~~~liDvR~~~e~~~-ghi------pgAi~ip~~~l-----~~~~~~~~~~-----~~~~~~i 66 (138)
+..|+++++.+++++ ++.+|||||++.||.. ||| |||+|||+..+ ......+.+. ++++++|
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i 83 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWATSDGTHNDNFLAELRDRIPADADQHERPV 83 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBCTTSCBCTTHHHHHHHHCC-------CCE
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeeccccccCHHHHHHHHHHHhhccCCCCCEE
Confidence 457999999999873 5799999999999997 999 99999999871 1123333322 3678999
Q ss_pred EEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccch------------hhhhhCCCCccccC
Q 032540 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF------------KGWEASGKPVCRCT 121 (138)
Q Consensus 67 v~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~------------~~w~~~g~p~~~~~ 121 (138)
||||++|. ++..++ ..|. ..||++|++|+||+ .+|+++|+|++...
T Consensus 84 vvyC~~G~-rS~~aa----~~L~----~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 84 IFLCRSGN-RSIGAA----EVAT----EAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp EEECSSSS-THHHHH----HHHH----HTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred EEEcCCCh-hHHHHH----HHHH----HcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 99999997 665555 4454 38999999999999 68888999988653
No 20
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.92 E-value=3e-25 Score=145.46 Aligned_cols=113 Identities=15% Similarity=0.127 Sum_probs=87.7
Q ss_pred ccccCHHHHHhhhC-CCCeEEEEecCCCccCC-Ccc------ccceecCCcchhH--HHHHHHHHh--cCCCeEEEEeCC
Q 032540 5 ISYISGSQLLSLKR-RPNIAVIDVRDDERSYD-GHI------TGSLHYPSDSFTD--KIFDLIQEV--RGKDTLVFHCAL 72 (138)
Q Consensus 5 ~~~i~~~~~~~~l~-~~~~~liDvR~~~e~~~-ghi------pgAi~ip~~~l~~--~~~~~~~~~--~~~~~iv~~c~~ 72 (138)
...|+++++.+++. +++.+|||||++.||.. +|+ |||+|||+..+.. .+..+...+ +++++|||||++
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~~~~~~~~~l~~~~~~~~~~~ivv~C~s 83 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKF 83 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGGGHHHHHHHHHTTCSCGGGCEEEEECSS
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccccChhHHHHHHHHhCCCCCCEEEEEeCC
Confidence 46799999999987 56799999999999975 444 7999999987532 233332222 678999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccch---hhhhhCCCCccccCCCccc
Q 032540 73 SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF---KGWEASGKPVCRCTDVPFF 126 (138)
Q Consensus 73 g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~---~~w~~~g~p~~~~~~~~~~ 126 (138)
|. |+..++ ..|.. .||++|++|.||+ .+|.++|+|++++...+.+
T Consensus 84 G~-RS~~aa----~~L~~----~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~~~~~~ 131 (134)
T 1vee_A 84 DG-NSELVA----ELVAL----NGFKSAYAIKDGAEGPRGWLNSSLPWIEPKKTSGP 131 (134)
T ss_dssp ST-THHHHH----HHHHH----HTCSEEEECTTTTTSTTSSGGGTCCEECCCCCCCC
T ss_pred CC-cHHHHH----HHHHH----cCCcceEEecCCccCCcchhhcCCCCCCCCCCCCC
Confidence 98 676665 34433 8999999999999 7899999999987665543
No 21
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.92 E-value=4.8e-26 Score=147.43 Aligned_cols=106 Identities=15% Similarity=0.183 Sum_probs=78.2
Q ss_pred cccCHHHHHhhhCCC-CeEEEEecCCCccCCCccccceecCCcchhHHHHHH----HHHh---------cCCCeEEEEeC
Q 032540 6 SYISGSQLLSLKRRP-NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDL----IQEV---------RGKDTLVFHCA 71 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~-~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~----~~~~---------~~~~~iv~~c~ 71 (138)
..|+++++.+++..+ +++|||||++.||..||||||+|||+..+......+ ...+ +++++||+||.
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~ 80 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTQEGAAVPIYVICK 80 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCHHHHHHHHHHHHHHHTTC---CCEEEEEECS
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhhhhHHHHHHHHhhhcccccCCCCCeEEEEcC
Confidence 368999999998754 589999999999999999999999998775432222 1111 12349999999
Q ss_pred CCCCCcHHHHHHHHHHHHHh--hhhCCCccEEEeccchhhhhhCCCC
Q 032540 72 LSQVRGPTCAKRLANYLDEV--KEDTGINSIFVLERGFKGWEASGKP 116 (138)
Q Consensus 72 ~g~~~~~~~~~~~~~~L~~~--l~~~G~~~v~~l~gG~~~w~~~g~p 116 (138)
+|. ++..++. .|... +...||.+|++|+||+.+|.++..|
T Consensus 81 ~G~-rs~~a~~----~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 81 LGN-DSQKAVK----ILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp SSS-HHHHHHH----HHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred CCC-cHHHHHH----HHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 987 6666653 34330 0113789999999999999987655
No 22
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.91 E-value=9.1e-25 Score=157.92 Aligned_cols=112 Identities=21% Similarity=0.259 Sum_probs=90.3
Q ss_pred cccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhH-------------HHHHHHHH--hcCCCeEEEEe
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD-------------KIFDLIQE--VRGKDTLVFHC 70 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-------------~~~~~~~~--~~~~~~iv~~c 70 (138)
..|+++++.++++.++++|||||++.+|..||||||+|+|+..+.. .+...... ++++++|||||
T Consensus 9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc 88 (271)
T 1e0c_A 9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYD 88 (271)
T ss_dssp SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEc
Confidence 4799999999997778999999999999999999999999876532 23333333 47889999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 71 ALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 71 ~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
++|..++..++ +.|+ ..||++|++|+||+.+|..+|+|+++....+.
T Consensus 89 ~~g~~~s~~a~----~~L~----~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~~~ 135 (271)
T 1e0c_A 89 DEGGGWAGRFI----WLLD----VIGQQRYHYLNGGLTAWLAEDRPLSRELPAPA 135 (271)
T ss_dssp SSSSHHHHHHH----HHHH----HTTCCCEEEETTHHHHHHHTTCCCBCCCCCCC
T ss_pred CCCCccHHHHH----HHHH----HcCCCCeEEecCCHHHHHHcCCCccCCCCCCC
Confidence 98763444443 4454 49999999999999999999999998766553
No 23
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.91 E-value=1.9e-24 Score=159.80 Aligned_cols=113 Identities=16% Similarity=0.199 Sum_probs=88.2
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecCCCc-cCCCccccceecCCcc-hh----------HHHHHHHHH--hcCCCeEEEEe
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRDDER-SYDGHITGSLHYPSDS-FT----------DKIFDLIQE--VRGKDTLVFHC 70 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~~~e-~~~ghipgAi~ip~~~-l~----------~~~~~~~~~--~~~~~~iv~~c 70 (138)
...|+++++.+++++++++|||||+..+ |..||||||+|+|+.. +. ..+...+.. ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 3459999999999877899999999876 9999999999999742 21 234444444 57889999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 71 ALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 71 ~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
++|..++..++ +.|+ ..||++|++|+||+.+|.++|+|++++...+.
T Consensus 119 ~~g~~~a~~a~----~~L~----~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~ 165 (318)
T 3hzu_A 119 DKSNWWAAYAL----WVFT----LFGHADVRLLNGGRDLWLAERRETTLDVPTKT 165 (318)
T ss_dssp SGGGHHHHHHH----HHHH----HTTCSCEEEETTHHHHHHHTTCCCBCCCCCCC
T ss_pred CCCCccHHHHH----HHHH----HcCCCceEEccCCHHHHhhcCCCcccCCCCCC
Confidence 98763443333 4453 49999999999999999999999998655443
No 24
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.91 E-value=2.1e-24 Score=156.68 Aligned_cols=113 Identities=18% Similarity=0.294 Sum_probs=90.5
Q ss_pred cccCHHHHHhhhCCCCeEEEEec----------CCCccCCCccccceecCCcchh-------------HHHHHHHHH--h
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVR----------DDERSYDGHITGSLHYPSDSFT-------------DKIFDLIQE--V 60 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR----------~~~e~~~ghipgAi~ip~~~l~-------------~~~~~~~~~--~ 60 (138)
..|+++++.+++++++++||||| ++.+|..||||||+|+|+..+. ..+...... +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 46999999999987789999999 6678999999999999987652 234444444 4
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCccc
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPFF 126 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~~ 126 (138)
+++++|||||++|.+.+..++ +.|+ ..||++|++|+||+.+|..+|+|++++...+.+
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~----~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~ 141 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAW----WMLR----TFGVEKVSILGGGLAGWQRDDLLLEEGAVELPE 141 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHH----HHHH----HTTCSCEEEETTHHHHHHHTTCCCBBSCCCCCC
T ss_pred CCCCeEEEECCCCCccHHHHH----HHHH----HcCCCCEEEecCCHHHHHHCCCcccCCCCCCCC
Confidence 778999999999874355554 4443 499999999999999999999999987665543
No 25
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.91 E-value=1e-24 Score=142.12 Aligned_cols=97 Identities=24% Similarity=0.401 Sum_probs=73.8
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhH-----------------------------HHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----------------------------KIF 54 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-----------------------------~~~ 54 (138)
.++.|+++++.+ .++++|||||++.||..||||||+|||+..+.. .+.
T Consensus 3 ~~~~i~~~el~~---~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (134)
T 3g5j_A 3 AMSVIKIEKALK---LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIY 79 (134)
T ss_dssp --CEECHHHHTT---CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHH
T ss_pred CccccCHHHHHh---cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHH
Confidence 467899999877 457999999999999999999999999975431 112
Q ss_pred HHHHHhcCC-CeEEEEeC-CCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhC
Q 032540 55 DLIQEVRGK-DTLVFHCA-LSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 55 ~~~~~~~~~-~~iv~~c~-~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~ 113 (138)
.....++++ ++||+||. +|. ++..++ ..|+ ..|| +|++|+||+.+|.+.
T Consensus 80 ~~~~~~~~~~~~ivvyC~~~G~-rs~~a~----~~L~----~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 80 LQAAELALNYDNIVIYCARGGM-RSGSIV----NLLS----SLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHHHTTCSEEEEECSSSSH-HHHHHH----HHHH----HTTC-CCEEETTHHHHHHHH
T ss_pred HHHHHhccCCCeEEEEECCCCh-HHHHHH----HHHH----HcCC-ceEEEeCcHHHHHHH
Confidence 222335677 99999995 665 555554 4454 4999 999999999999864
No 26
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.91 E-value=2.5e-24 Score=156.01 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=88.2
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecC-CCccCCCccccceecCCcchh-----------HHHHHHHHH--hcCCCeEEEEe
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRD-DERSYDGHITGSLHYPSDSFT-----------DKIFDLIQE--VRGKDTLVFHC 70 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~-~~e~~~ghipgAi~ip~~~l~-----------~~~~~~~~~--~~~~~~iv~~c 70 (138)
...|+++++.++++.++.+|||||+ +.+|..||||||+|+|+..+. ..+...... ++++++|||||
T Consensus 5 ~~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc 84 (277)
T 3aay_A 5 DVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYG 84 (277)
T ss_dssp HHEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEEC
T ss_pred CceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 3569999999999877899999998 899999999999999987421 133333333 57889999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 71 ALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 71 ~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
++|..++..++ +.|+ ..||++|++|+||+.+|..+|+|+++....+.
T Consensus 85 ~~g~~~s~~a~----~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~ 131 (277)
T 3aay_A 85 GNNNWFAAYAY----WYFK----LYGHEKVKLLDGGRKKWELDGRPLSSDPVSRP 131 (277)
T ss_dssp SGGGHHHHHHH----HHHH----HTTCCSEEEETTHHHHHHHTTCCCBCCCCCCC
T ss_pred CCCCchHHHHH----HHHH----HcCCCcEEEecCCHHHHHHcCCccccCCCCcC
Confidence 88653333333 4443 49999999999999999999999998765443
No 27
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.90 E-value=4.3e-25 Score=148.64 Aligned_cols=116 Identities=22% Similarity=0.372 Sum_probs=86.5
Q ss_pred CccccCHHHHHhhhCC------CCeEEEEecCCCccCCCccccceecCCcchhHHH-HHHHHHh-cCCCeE--EEEeC-C
Q 032540 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKI-FDLIQEV-RGKDTL--VFHCA-L 72 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~------~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~-~~~~~~~-~~~~~i--v~~c~-~ 72 (138)
.++.|+++++.++++. ++++|||||++.||..||||||+|||+..+.... ... ..+ ++++++ |+||+ +
T Consensus 21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~-~~~~~~~~~ivvv~yC~~s 99 (161)
T 1c25_A 21 DLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFLLKK-PIVPTDGKRVIVVFHCEFS 99 (161)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHTTTS-CCCCCTTSEEEEEEECSSS
T ss_pred CcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHHhhh-hhccCCCCCeEEEEEcCCC
Confidence 5678999999999975 3689999999999999999999999998764332 110 012 456775 67899 7
Q ss_pred CCCCcHHHHHHHHHHH--HHhhhhCCCccEEEeccchhhhhhCCCCccccC
Q 032540 73 SQVRGPTCAKRLANYL--DEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 73 g~~~~~~~~~~~~~~L--~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
|. ++..++..+...- ...|+..||++|++|+||+.+|.+++.|++.+.
T Consensus 100 g~-rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~~ 149 (161)
T 1c25_A 100 SE-RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEPP 149 (161)
T ss_dssp SS-HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEESS
T ss_pred Cc-chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCCC
Confidence 76 6766664433210 001334799999999999999999999998864
No 28
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.90 E-value=1.6e-24 Score=157.59 Aligned_cols=114 Identities=15% Similarity=0.205 Sum_probs=88.1
Q ss_pred CccccCHHHHHhhhCCCCeEEEEec-CCCccCCCccccceecCCcchh-----------HHHHHHHHH--hcCCCeEEEE
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVR-DDERSYDGHITGSLHYPSDSFT-----------DKIFDLIQE--VRGKDTLVFH 69 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR-~~~e~~~ghipgAi~ip~~~l~-----------~~~~~~~~~--~~~~~~iv~~ 69 (138)
....|+++++.++++.++++||||| ++.+|..||||||+|+|+..+. ..+...... ++++++||||
T Consensus 6 ~~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvy 85 (285)
T 1uar_A 6 PEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLY 85 (285)
T ss_dssp GGGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 3457999999999987789999999 6899999999999999986411 123443333 4788999999
Q ss_pred eCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 70 CALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 70 c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
|++|.+++..++ +.|+ ..||++|++|+||+.+|..+|+|++++...+.
T Consensus 86 c~~g~~~s~~a~----~~L~----~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~ 133 (285)
T 1uar_A 86 GDKNNWWAAYAF----WFFK----YNGHKDVRLMNGGRQKWVEEGRPLTTEVPSYP 133 (285)
T ss_dssp CHHHHHHHHHHH----HHHH----HTTCSCEEEETTHHHHHHHHTCCCBCCCCCCC
T ss_pred CCCCCccHHHHH----HHHH----HcCCCCeEEecCCHHHHHHCCCcccCCCCccc
Confidence 987653333333 4454 49999999999999999999999988655443
No 29
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.90 E-value=1.7e-24 Score=147.53 Aligned_cols=116 Identities=16% Similarity=0.305 Sum_probs=84.7
Q ss_pred CccccCHHHHHhhhCC------CCeEEEEecCCCccCCCccccceecCCcchhHH-HHHHHHHhc--CCCeEEE--EeC-
Q 032540 4 SISYISGSQLLSLKRR------PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IFDLIQEVR--GKDTLVF--HCA- 71 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~------~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~-~~~~~~~~~--~~~~iv~--~c~- 71 (138)
.++.|+++++.++++. ++++|||||++.||..||||||+|||+..+... +... ..++ ++++||| ||+
T Consensus 22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~-~~~~~~~~~~ivvv~yC~~ 100 (175)
T 2a2k_A 22 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKS-PIAPCSLDKRVILIFHSEF 100 (175)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHSS-CCCC----CEEEEEEECSS
T ss_pred CCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHhhhhh-hhccccCCCCeEEEEECCC
Confidence 5678999999999975 368999999999999999999999999876443 1110 0123 5678754 688
Q ss_pred CCCCCcHHHHHHHHHH--HHHhhhhCCCccEEEeccchhhhhhCCCCccccC
Q 032540 72 LSQVRGPTCAKRLANY--LDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 72 ~g~~~~~~~~~~~~~~--L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
+|. ++..++..+... ....|..+||++|++|+||+.+|.+++.|++.+.
T Consensus 101 ~g~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~ 151 (175)
T 2a2k_A 101 SSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 151 (175)
T ss_dssp SSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred CCC-ccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCC
Confidence 776 666666433321 0012445799999999999999999999987754
No 30
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.90 E-value=2.1e-24 Score=144.07 Aligned_cols=115 Identities=18% Similarity=0.265 Sum_probs=82.5
Q ss_pred cccCHHHHHhhhCC--CCeEEEEecCCCccCCCccccceecCCcch-hHHHH-------HHH-H------HhcCCCeEEE
Q 032540 6 SYISGSQLLSLKRR--PNIAVIDVRDDERSYDGHITGSLHYPSDSF-TDKIF-------DLI-Q------EVRGKDTLVF 68 (138)
Q Consensus 6 ~~i~~~~~~~~l~~--~~~~liDvR~~~e~~~ghipgAi~ip~~~l-~~~~~-------~~~-~------~~~~~~~iv~ 68 (138)
+.|+++++.++++. ++++|||||++.||..||||||+|||+..+ ...+. .+. . .++++++|||
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 46899999999973 579999999999999999999999999886 33222 322 1 1257789999
Q ss_pred EeCCCCCCcHHHH--HHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCC
Q 032540 69 HCALSQVRGPTCA--KRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDV 123 (138)
Q Consensus 69 ~c~~g~~~~~~~~--~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~ 123 (138)
||++|. ++..++ ..++..|.. | ..||++|++|+||+.+|...+.+++.+...
T Consensus 84 yc~~g~-~s~~a~~~~~~~~~L~~-l-~~G~~~v~~L~GG~~~W~~~~~~~~~~~~~ 137 (153)
T 2vsw_A 84 YDQSSQ-DVASLSSDCFLTVLLGK-L-EKSFNSVHLLAGGFAEFSRCFPGLCEGKST 137 (153)
T ss_dssp ECSSCC-CGGGSCTTSHHHHHHHH-H-HHHCSCEEEETTHHHHHHHHCGGGEEC---
T ss_pred EeCCCC-cccccccchHHHHHHHH-H-HhCCCcEEEEeChHHHHHHhChhhhcCCCC
Confidence 999988 443331 011123321 1 139999999999999999887777765433
No 31
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.90 E-value=1e-24 Score=143.40 Aligned_cols=111 Identities=16% Similarity=0.215 Sum_probs=76.8
Q ss_pred cccCHHHHHh--------hhCCCCeEEEEecCCCccCCCccccceecCCcchhHH--H-------HHHHH------Hh--
Q 032540 6 SYISGSQLLS--------LKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDK--I-------FDLIQ------EV-- 60 (138)
Q Consensus 6 ~~i~~~~~~~--------~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~--~-------~~~~~------~~-- 60 (138)
+.|+++++.+ ++..++++|||||++.||..||||||+|+|+..+... + ..+.. ..
T Consensus 1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (142)
T 2ouc_A 1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKR 80 (142)
T ss_dssp CEECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHH
T ss_pred CccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhc
Confidence 3589999999 6666678999999999999999999999999875321 1 11110 00
Q ss_pred cCCCeEEEEeCCCCCCcHH----HHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccC
Q 032540 61 RGKDTLVFHCALSQVRGPT----CAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~----~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
..+++||+||++|.+.+.. .+.+++..|. ..|| +|++|+||+.+|..+|+|++.+.
T Consensus 81 ~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~----~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 81 IFSKEIIVYDENTNEPSRVMPSQPLHIVLESLK----REGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp HHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHH----HTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred cCCCcEEEEECCCCchhhcCcccHHHHHHHHHH----HcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 0258899999999842210 0122334454 4999 99999999999999999988753
No 32
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.90 E-value=3.8e-24 Score=150.02 Aligned_cols=116 Identities=18% Similarity=0.352 Sum_probs=87.4
Q ss_pred CccccCHHHHHhhhCCC------CeEEEEecCCCccCCCccccceecCCcchhHH-HHHHHHHhc--CCCeE--EEEeC-
Q 032540 4 SISYISGSQLLSLKRRP------NIAVIDVRDDERSYDGHITGSLHYPSDSFTDK-IFDLIQEVR--GKDTL--VFHCA- 71 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~------~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~-~~~~~~~~~--~~~~i--v~~c~- 71 (138)
.++.|+++++.++++.+ +++|||||++.||..||||||+|||+..+... +... ..++ ++++| |+||+
T Consensus 42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~~~~~~-~~l~~~~d~~ivvVvyC~~ 120 (211)
T 1qb0_A 42 DLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESFLLKS-PIAPCSLDKRVILIFHCEF 120 (211)
T ss_dssp TSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHHHTT-TCCCSSTTSEEEEEEECSS
T ss_pred CCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHHhhhhh-hhccccCCCCeEEEEECCC
Confidence 56789999999999763 68999999999999999999999999876542 2111 1223 56787 78899
Q ss_pred CCCCCcHHHHHHHHHH--HHHhhhhCCCccEEEeccchhhhhhCCCCccccC
Q 032540 72 LSQVRGPTCAKRLANY--LDEVKEDTGINSIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 72 ~g~~~~~~~~~~~~~~--L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
+|. ++..++..+... ....|..+||++|++|+||+.+|.++|.|++.+.
T Consensus 121 sG~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~~ 171 (211)
T 1qb0_A 121 SSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQ 171 (211)
T ss_dssp SSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESS
T ss_pred CCc-cHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCCC
Confidence 887 676666433321 0012345899999999999999999999987754
No 33
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=8.6e-24 Score=152.78 Aligned_cols=105 Identities=19% Similarity=0.289 Sum_probs=85.7
Q ss_pred cccCHHHHHhhhCCCCeEEEEecCCCccC--------CCccccceecCCcchhH---------HHHHHHH--HhcCCCeE
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVRDDERSY--------DGHITGSLHYPSDSFTD---------KIFDLIQ--EVRGKDTL 66 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR~~~e~~--------~ghipgAi~ip~~~l~~---------~~~~~~~--~~~~~~~i 66 (138)
..|+++++.+++.+++.+|||||++.||. .||||||+|+|+..+.. .+..+.. .++++++|
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i 226 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEI 226 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEE
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence 45799999999987789999999999999 99999999999987642 2333333 35788999
Q ss_pred EEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhC-CCCccc
Q 032540 67 VFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS-GKPVCR 119 (138)
Q Consensus 67 v~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~-g~p~~~ 119 (138)
|+||++|. ++..++ ..|+ ..||++|++|+||+.+|... |+|+++
T Consensus 227 vvyC~~G~-rs~~a~----~~L~----~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 227 VTHCQTHH-RSGLTY----LIAK----ALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp EEECSSSS-HHHHHH----HHHH----HTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred EEECCchH-HHHHHH----HHHH----HcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 99999987 555554 3443 48999999999999999998 999863
No 34
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.89 E-value=4.3e-24 Score=129.55 Aligned_cols=84 Identities=21% Similarity=0.319 Sum_probs=66.6
Q ss_pred CeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccE
Q 032540 21 NIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSI 100 (138)
Q Consensus 21 ~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v 100 (138)
+.+|||||++.||..||||||+|+|+.++...+..+ ..+++++||+||++|. ++..++ ..|.+ .||++|
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l--~~~~~~~ivv~C~~g~-rs~~aa----~~L~~----~G~~~v 69 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATA--VPDKNDTVKVYCNAGR-QSGQAK----EILSE----MGYTHV 69 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHHHHHH--CCCTTSEEEEEESSSH-HHHHHH----HHHHH----TTCSSE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHHHHHh--CCCCCCcEEEEcCCCc-hHHHHH----HHHHH----cCCCCE
Confidence 478999999999999999999999998877655544 1267899999999886 555554 44543 899999
Q ss_pred EEeccchhhhhhCCCCccc
Q 032540 101 FVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 101 ~~l~gG~~~w~~~g~p~~~ 119 (138)
+++ ||+.+|. .|+++
T Consensus 70 ~~l-GG~~~w~---~~~~~ 84 (85)
T 2jtq_A 70 ENA-GGLKDIA---MPKVK 84 (85)
T ss_dssp EEE-EETTTCC---SCEEE
T ss_pred Eec-cCHHHHh---ccccc
Confidence 999 9999994 45544
No 35
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.89 E-value=2.9e-23 Score=151.91 Aligned_cols=112 Identities=20% Similarity=0.331 Sum_probs=88.3
Q ss_pred cccCHHHHHhhhCC----CCeEEEEec--------CCCccCCCccccceecCCcchhH-------------HHHHHHHH-
Q 032540 6 SYISGSQLLSLKRR----PNIAVIDVR--------DDERSYDGHITGSLHYPSDSFTD-------------KIFDLIQE- 59 (138)
Q Consensus 6 ~~i~~~~~~~~l~~----~~~~liDvR--------~~~e~~~ghipgAi~ip~~~l~~-------------~~~~~~~~- 59 (138)
..|+++++.+++.. ++++||||| +..+|..||||||+|+|+..+.. .+......
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~l 87 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 46999999999876 579999999 57899999999999999986532 23333332
Q ss_pred -hcCCCeEEEEeCC--CCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 60 -VRGKDTLVFHCAL--SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 60 -~~~~~~iv~~c~~--g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
++++++|||||++ |.+++..++ +.|+ ..||++|++|+||+.+|..+|+|+++....+.
T Consensus 88 gi~~~~~vVvyc~~~~g~~~a~~a~----~~L~----~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~ 148 (296)
T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVW----WMFR----VFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPE 148 (296)
T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHH----HHHH----HTTCCCEEEETTHHHHHHHTTCCCBCSCCCCC
T ss_pred CCCCCCeEEEEcCCCCCcchHHHHH----HHHH----HcCCCcEEEcCCCHHHHHHcCCccccCCCCCC
Confidence 4678999999998 764454443 4443 49999999999999999999999998755543
No 36
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.89 E-value=7.7e-24 Score=166.07 Aligned_cols=111 Identities=19% Similarity=0.302 Sum_probs=91.8
Q ss_pred CccccCHHHHHhhhCC-CCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHH
Q 032540 4 SISYISGSQLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAK 82 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~-~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~ 82 (138)
.++.|+++++.+++.. ++++|||||++.+|..||||||+|||+..|...+..+. .+++++|||||++|. ++..++
T Consensus 5 ~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~~~~l~--~~~~~~iVvyc~~g~-~s~~a~- 80 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELEIHARV--PRRDTPITVYDDGEG-LAPVAA- 80 (539)
T ss_dssp -CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHHHHHHS--CCTTSCEEEECSSSS-HHHHHH-
T ss_pred cCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHHHHhhC--CCCCCeEEEEECCCC-hHHHHH-
Confidence 6788999999999874 47999999999999999999999999998877665542 136799999999887 555554
Q ss_pred HHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 83 RLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 83 ~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
+.|+. .||++|++|+||+.+|.++|+|++++...|.
T Consensus 81 ---~~L~~----~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~ 116 (539)
T 1yt8_A 81 ---QRLHD----LGYSDVALLDGGLSGWRNAGGELFRDVNVPS 116 (539)
T ss_dssp ---HHHHH----TTCSSEEEETTHHHHHHHTTCCCBCSSSHHH
T ss_pred ---HHHHH----cCCCceEEeCCCHHHHHhcCCCcccCCcCcC
Confidence 45544 9999999999999999999999988765543
No 37
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.89 E-value=1e-23 Score=153.04 Aligned_cols=105 Identities=17% Similarity=0.311 Sum_probs=77.9
Q ss_pred cccCHHHHHhhhCCCCeEEEEecCCCcc-----------CCCccccceecCCcchhH--------HHHHHHH--HhcCCC
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTD--------KIFDLIQ--EVRGKD 64 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR~~~e~-----------~~ghipgAi~ip~~~l~~--------~~~~~~~--~~~~~~ 64 (138)
..|+++++.+++..++.+|||||++.|| ..||||||+|||+.++.. .+..++. .+++++
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDK 231 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSS
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCC
Confidence 3599999999987667899999999999 689999999999987754 4544443 347789
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh-CCCCccc
Q 032540 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCR 119 (138)
Q Consensus 65 ~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~-~g~p~~~ 119 (138)
+||+||++|. ++..++ ..|. .+||++|++|+||+.+|.. .++|+++
T Consensus 232 ~ivv~C~~G~-rs~~a~----~~L~----~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 278 (280)
T 1urh_A 232 PIIVSCGSGV-TAAVVL----LALA----TLDVPNVKLYDGAWSEWGARADLPVEP 278 (280)
T ss_dssp CEEEECCSSS-THHHHH----HHHH----HTTCSSCEEECCSCCC-----------
T ss_pred CEEEECChHH-HHHHHH----HHHH----HcCCCCceeeCChHHHHhcCCCCCcee
Confidence 9999999998 665554 3443 3899999999999999987 5999875
No 38
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.89 E-value=6.4e-23 Score=150.65 Aligned_cols=113 Identities=17% Similarity=0.278 Sum_probs=86.3
Q ss_pred ccccCHHHHHhhhCCC----CeEEEEec---------CCCccCCCccccceecCCcchh-------------HHHHHHHH
Q 032540 5 ISYISGSQLLSLKRRP----NIAVIDVR---------DDERSYDGHITGSLHYPSDSFT-------------DKIFDLIQ 58 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~----~~~liDvR---------~~~e~~~ghipgAi~ip~~~l~-------------~~~~~~~~ 58 (138)
-..|+++++.+++.++ +++||||| +..+|..||||||+|+|++.+. ..+.....
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~~ 100 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAG 100 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHHH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHHH
Confidence 3569999999998764 79999999 6789999999999999987531 23444444
Q ss_pred H--hcCCCeEEEEeCC--CCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 59 E--VRGKDTLVFHCAL--SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 59 ~--~~~~~~iv~~c~~--g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
. ++++++|||||++ |..++..++ +.|+ ..||++|++|+||+.+|..+|+|+++....+.
T Consensus 101 ~lgi~~~~~VVvyc~~~~g~~~a~ra~----~~L~----~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~ 163 (302)
T 3olh_A 101 RLGVGAATHVVIYDASDQGLYSAPRVW----WMFR----AFGHHAVSLLDGGLRHWLRQNLPLSSGKSQPA 163 (302)
T ss_dssp HTTCCSSCEEEEECCCTTSCSSHHHHH----HHHH----HTTCCCEEEETTHHHHHHHSCCC-CCSCCCCC
T ss_pred HcCCCCCCEEEEEeCCCCCcchHHHHH----HHHH----HcCCCcEEECCCCHHHHHHcCCCcccCCCCcC
Confidence 4 3788999999975 333444443 4454 49999999999999999999999998755443
No 39
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.6e-23 Score=150.98 Aligned_cols=103 Identities=17% Similarity=0.301 Sum_probs=84.9
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHH--hcCCCeEEEEeCCCCCCcHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQE--VRGKDTLVFHCALSQVRGPTCA 81 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~--~~~~~~iv~~c~~g~~~~~~~~ 81 (138)
..+.|+++++.+++++++++|||||++.||..||||||+|+|+..+.+....+... .+++++||+||.+|. ++..++
T Consensus 120 ~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~~~~~l~~~l~~~kdk~IVvyC~~G~-RS~~Aa 198 (265)
T 4f67_A 120 AGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFREFPDYVQRNLIDKKDKKIAMFCTGGI-RCEKTT 198 (265)
T ss_dssp TTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGGHHHHHHHHTGGGTTSCEEEECSSSH-HHHHHH
T ss_pred CCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHhhHHHHHHhhhhCCCCeEEEEeCCCh-HHHHHH
Confidence 45779999999999888899999999999999999999999999887654444333 267899999999887 555554
Q ss_pred HHHHHHHHHhhhhCCCccEEEeccchhhhhhCCC
Q 032540 82 KRLANYLDEVKEDTGINSIFVLERGFKGWEASGK 115 (138)
Q Consensus 82 ~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~ 115 (138)
..|.. .||++|++|+||+.+|.++..
T Consensus 199 ----~~L~~----~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 199 ----AYMKE----LGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp ----HHHHH----HTCSSEEEETTHHHHHHHHSC
T ss_pred ----HHHHH----cCCCCEEEecCHHHHHHHhcC
Confidence 44543 899999999999999987643
No 40
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.88 E-value=2.3e-23 Score=152.41 Aligned_cols=107 Identities=17% Similarity=0.203 Sum_probs=87.2
Q ss_pred cccCHHHHHhhhCCCCeEEEEecCCCcc------------CCCccccceecCCcchhH---------HHHHHHHH--hcC
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVRDDERS------------YDGHITGSLHYPSDSFTD---------KIFDLIQE--VRG 62 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR~~~e~------------~~ghipgAi~ip~~~l~~---------~~~~~~~~--~~~ 62 (138)
..|+++++.++++.++.+|||||++.|| ..||||||+|||+.++.. .+...+.. +++
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 239 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDL 239 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCT
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCC
Confidence 4689999999987667899999999999 889999999999987642 34443332 578
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh-CCCCccccC
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCT 121 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~-~g~p~~~~~ 121 (138)
+++||+||++|. ++..++ ..|. .+||++|++|+||+.+|.. .++|++++.
T Consensus 240 ~~~ivv~C~sG~-rs~~a~----~~L~----~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 240 TKPLIATCRKGV-TACHIA----LAAY----LCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp TSCEEEECSSSS-THHHHH----HHHH----HTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred CCCEEEECCcHH-HHHHHH----HHHH----HcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 899999999998 665554 3343 3899999999999999988 799998864
No 41
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=146.84 Aligned_cols=115 Identities=22% Similarity=0.369 Sum_probs=82.2
Q ss_pred CccccCHHHHHhhhCCC------CeEEEEecCCCccCCCccccceecCCcc-hhHHHHHHHHHh--cCCC--eEEEEeC-
Q 032540 4 SISYISGSQLLSLKRRP------NIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQEV--RGKD--TLVFHCA- 71 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~------~~~liDvR~~~e~~~ghipgAi~ip~~~-l~~~~~~~~~~~--~~~~--~iv~~c~- 71 (138)
.++.|+++++.++++.+ +++|||||++.||..||||||+|||..+ +...+... ..+ +.++ +||+||.
T Consensus 55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~-~~~~~~~~k~~~VVvyC~~ 133 (216)
T 3op3_A 55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKK-PIVPLDTQKRIIIVFHCEF 133 (216)
T ss_dssp SSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSS-CCCCSSTTSEEEEEEECCC
T ss_pred CCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhc-cccccccCCCCEEEEEeCC
Confidence 46789999999999865 6899999999999999999999999875 32222110 001 2234 4999999
Q ss_pred CCCCCcHHHHHHHHHHHHH--hhhhCCCccEEEeccchhhhhhCCCCcccc
Q 032540 72 LSQVRGPTCAKRLANYLDE--VKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 72 ~g~~~~~~~~~~~~~~L~~--~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
+|. |+..++..+....+. .+..+||++|++|+||+.+|.++...++.+
T Consensus 134 SG~-Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lcep 183 (216)
T 3op3_A 134 SSE-RGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCEP 183 (216)
T ss_dssp --C-CHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred CCh-HHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCcccccC
Confidence 777 787777544432111 011249999999999999999987777665
No 42
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.87 E-value=1.3e-22 Score=159.16 Aligned_cols=108 Identities=18% Similarity=0.265 Sum_probs=92.3
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
.+..|+++++.+++..++.+|||||++.||..||||||+|+|..+|...+..+ +++++||+||.+|. ++..++
T Consensus 375 ~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~l~~l----~~~~~ivv~C~sG~-rs~~aa-- 447 (539)
T 1yt8_A 375 RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQALERL----GTAERYVLTCGSSL-LARFAV-- 447 (539)
T ss_dssp CCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGGGHHHHHHHH----CCCSEEEEECSSSH-HHHHHH--
T ss_pred cCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHHHHhC----CCCCeEEEEeCCCh-HHHHHH--
Confidence 45679999999999877899999999999999999999999999887776654 88899999999987 555554
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCc
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (138)
..|. ..||++|++|+||+.+|.++|+|++++...+
T Consensus 448 --~~L~----~~G~~~v~~l~GG~~~W~~~g~pv~~~~~~~ 482 (539)
T 1yt8_A 448 --AEVQ----ALSGKPVFLLDGGTSAWVAAGLPTEDGESLL 482 (539)
T ss_dssp --HHHH----HHHCSCEEEETTHHHHHHHTTCCCBCSSCCB
T ss_pred --HHHH----HcCCCCEEEeCCcHHHHHhCCCCcccCCCCC
Confidence 4443 3899999999999999999999999874443
No 43
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.87 E-value=2.3e-23 Score=139.07 Aligned_cols=104 Identities=21% Similarity=0.182 Sum_probs=76.4
Q ss_pred CccccCHHHHHhhhCCC--CeEEEEecCCCccCCCccccceecCCcchhH------------H-----HHHHHHHhcCCC
Q 032540 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD------------K-----IFDLIQEVRGKD 64 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~--~~~liDvR~~~e~~~ghipgAi~ip~~~l~~------------~-----~~~~~~~~~~~~ 64 (138)
.+..|+++++.++++.+ +++|||||++.||..||||||+|||+..+.. . ....+..+++++
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 93 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTRRCGTD 93 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHHSTTSS
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhccCCCC
Confidence 45779999999988754 7899999999999999999999999876430 1 112223346778
Q ss_pred eEEEEeCCCCCC-----c-HHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhC
Q 032540 65 TLVFHCALSQVR-----G-PTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 65 ~iv~~c~~g~~~-----~-~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~ 113 (138)
+||+||++|.+. + ..++ ..|+. +...||+ |++|+||+.+|...
T Consensus 94 ~iVvyc~~g~~~~~~~~aa~~~~----~~l~~-l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 94 TVVLYDESSSDWNENTGGESLLG----LLLKK-LKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp CEEECCCSSSSSCSCSSCCSHHH----HHHHH-HHHTTCC-CEECCCCHHHHHHH
T ss_pred eEEEEeCCCCccccccccchHHH----HHHHH-HHHCCCc-eEEEcChHHHHHHH
Confidence 999999998744 1 2222 22221 2236997 99999999999876
No 44
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.87 E-value=1.7e-22 Score=146.86 Aligned_cols=107 Identities=18% Similarity=0.288 Sum_probs=83.3
Q ss_pred cccCHHHHHhhhC---CCCeEEEEecCCCccC----------------CCccccceecCCcchh---------HHHHHHH
Q 032540 6 SYISGSQLLSLKR---RPNIAVIDVRDDERSY----------------DGHITGSLHYPSDSFT---------DKIFDLI 57 (138)
Q Consensus 6 ~~i~~~~~~~~l~---~~~~~liDvR~~~e~~----------------~ghipgAi~ip~~~l~---------~~~~~~~ 57 (138)
..|+++++.+++. .++..|||||++.||. .||||||+|+|+..+. +.+...+
T Consensus 146 ~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~ 225 (285)
T 1uar_A 146 IRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALY 225 (285)
T ss_dssp GEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHH
T ss_pred eEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHH
Confidence 3489999999883 1345799999999997 8999999999988764 2344444
Q ss_pred HH--hcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh-hCCCCcccc
Q 032540 58 QE--VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE-ASGKPVCRC 120 (138)
Q Consensus 58 ~~--~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~-~~g~p~~~~ 120 (138)
.. ++++++||+||++|. ++..++ ..|+ ..+||++|++|+||+.+|. .+|+|++++
T Consensus 226 ~~~g~~~~~~ivvyC~~G~-rs~~a~----~~L~---~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 226 EPLGITKDKDIVVYCRIAE-RSSHSW----FVLK---YLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp GGGTCCTTSEEEEECSSHH-HHHHHH----HHHH---TTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHcCCCCCCCEEEECCchH-HHHHHH----HHHH---HHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 44 578899999999886 554443 4443 0499999999999999998 789999875
No 45
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.87 E-value=3.5e-23 Score=160.00 Aligned_cols=103 Identities=21% Similarity=0.411 Sum_probs=87.0
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
....++++++.+++..++.+|||+|++.||..||||||+|+|+.++...+.. ++++++||+||++|. ++..++
T Consensus 372 ~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~----l~~~~~vvv~C~~G~-ra~~a~-- 444 (474)
T 3tp9_A 372 SYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHD----VPRDGSVCVYCRTGG-RSAIAA-- 444 (474)
T ss_dssp CCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTGGG----SCSSSCEEEECSSSH-HHHHHH--
T ss_pred cccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHHhc----CCCCCEEEEECCCCH-HHHHHH--
Confidence 3467999999999987789999999999999999999999999887655544 478899999999987 555544
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
..|+ ..||++|++|+||+.+|.++|+|+++
T Consensus 445 --~~L~----~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 445 --SLLR----AHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp --HHHH----HHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred --HHHH----HcCCCCEEEecChHHHHHhCCCCCCC
Confidence 3443 48999999999999999999999864
No 46
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.86 E-value=2.6e-22 Score=147.38 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=82.8
Q ss_pred cccCHHHHHhhhCCCCeEEEEecCCCcc-----------CCCccccceecCCcchhH---------HHHHHHH--HhcCC
Q 032540 6 SYISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSDSFTD---------KIFDLIQ--EVRGK 63 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~liDvR~~~e~-----------~~ghipgAi~ip~~~l~~---------~~~~~~~--~~~~~ 63 (138)
..++.+++.+.++.++.+|||||+++|| ..||||||+|||+.++.. .+...+. .++++
T Consensus 175 ~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 254 (302)
T 3olh_A 175 FIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLS 254 (302)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTT
T ss_pred ceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCC
Confidence 3588999999887677899999999999 889999999999887632 3444333 25778
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCc
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPV 117 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~ 117 (138)
++||+||++|. ++..++ ..| +.+||++|++|+||+.+|..+++|.
T Consensus 255 ~~iv~yC~sG~-rs~~a~----~~L----~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 255 KPLVATCGSGV-TACHVA----LGA----YLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp SCEEEECSSSS-TTHHHH----HHH----HTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred CCEEEECCChH-HHHHHH----HHH----HHcCCCCeeEeCCcHHHHhhccCCC
Confidence 99999999998 555554 334 3499999999999999999998874
No 47
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.86 E-value=4.4e-22 Score=152.08 Aligned_cols=111 Identities=19% Similarity=0.328 Sum_probs=86.6
Q ss_pred ccCHHHHHhhhCCCCeEEEEecCCCcc-----------CCCccccceecCCc-------chh---------HHHHHHHH-
Q 032540 7 YISGSQLLSLKRRPNIAVIDVRDDERS-----------YDGHITGSLHYPSD-------SFT---------DKIFDLIQ- 58 (138)
Q Consensus 7 ~i~~~~~~~~l~~~~~~liDvR~~~e~-----------~~ghipgAi~ip~~-------~l~---------~~~~~~~~- 58 (138)
.|+.+++.+++..++.+|||||++.|| ..||||||+|+|+. ++. ..+...+.
T Consensus 273 ~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 352 (423)
T 2wlr_A 273 MLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKA 352 (423)
T ss_dssp EECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHT
T ss_pred eecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHH
Confidence 489999999988778999999999999 89999999999985 111 13333332
Q ss_pred -HhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh-CCCCccccCCCccc
Q 032540 59 -EVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRCTDVPFF 126 (138)
Q Consensus 59 -~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~-~g~p~~~~~~~~~~ 126 (138)
.++++++||+||++|. |+..++ ..|. .+||++|++|+||+.+|.. .++|++++...|.+
T Consensus 353 ~~~~~~~~ivvyC~sG~-rs~~aa----~~L~----~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~~~~ 413 (423)
T 2wlr_A 353 WNIKPEQQVSFYCGTGW-RASETF----MYAR----AMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDS 413 (423)
T ss_dssp TTCCTTSEEEEECSSSH-HHHHHH----HHHH----HTTCSSEEEESSHHHHHTTSTTSCEECSSCCC--
T ss_pred cCCCCCCcEEEECCcHH-HHHHHH----HHHH----HcCCCCcceeCccHHHHhcCCCCCcccCCCCCCh
Confidence 3478899999999987 555554 3343 4899999999999999998 89999987665543
No 48
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.86 E-value=2.7e-22 Score=148.30 Aligned_cols=104 Identities=19% Similarity=0.311 Sum_probs=83.3
Q ss_pred ccCHHHHHhhhCCCCeEEEEecCCCccCC----------------CccccceecCCcchh---------HHHHHHHHHhc
Q 032540 7 YISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSFT---------DKIFDLIQEVR 61 (138)
Q Consensus 7 ~i~~~~~~~~l~~~~~~liDvR~~~e~~~----------------ghipgAi~ip~~~l~---------~~~~~~~~~~~ 61 (138)
.++.+++.+++++. +|||||+++||.. ||||||+|+|+.++. ..+...+..++
T Consensus 180 ~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l~ 257 (318)
T 3hzu_A 180 RAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFIN 257 (318)
T ss_dssp BCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCC
T ss_pred cccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCCC
Confidence 47899999998764 8999999999987 999999999997542 23444444567
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhh-CCCccEEEeccchhhhhh-CCCCccccC
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKED-TGINSIFVLERGFKGWEA-SGKPVCRCT 121 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~-~G~~~v~~l~gG~~~w~~-~g~p~~~~~ 121 (138)
++++||+||++|. ++..++ ..| ++ .||++|++|+||+.+|.. .|+|++++.
T Consensus 258 ~~~~ivvyC~sG~-rs~~a~----~~L----~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~ 310 (318)
T 3hzu_A 258 PDDQTVVYCRIGE-RSSHTW----FVL----THLLGKADVRNYDGSWTEWGNAVRVPIVAGE 310 (318)
T ss_dssp TTCCCEEECSSSH-HHHHHH----HHH----HHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred CCCcEEEEcCChH-HHHHHH----HHH----HHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence 8899999999987 555544 223 33 899999999999999995 699999874
No 49
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.86 E-value=7.5e-22 Score=148.70 Aligned_cols=110 Identities=14% Similarity=0.228 Sum_probs=84.8
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecC--------CCccCCCccccceecCCcc-hhH---------------HHHHHHHH-
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRD--------DERSYDGHITGSLHYPSDS-FTD---------------KIFDLIQE- 59 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~--------~~e~~~ghipgAi~ip~~~-l~~---------------~~~~~~~~- 59 (138)
...|+++++.+++++ ++|||||+ +.||..||||||+|+|+.. +.. .+......
T Consensus 13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~ 90 (373)
T 1okg_A 13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMAN 90 (373)
T ss_dssp CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHT
T ss_pred CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHc
Confidence 467999999998875 89999998 6899999999999999975 532 23333332
Q ss_pred -hcCCCeEEEEe-CCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCcc
Q 032540 60 -VRGKDTLVFHC-ALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPF 125 (138)
Q Consensus 60 -~~~~~~iv~~c-~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~~ 125 (138)
++++++||||| .+|.+++..++ +.|+ ..|| +|++|+||+.+|.++|+|++++...+.
T Consensus 91 gi~~d~~VVvYc~~~G~rsa~ra~----~~L~----~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~~~ 149 (373)
T 1okg_A 91 GMAGELPVLCYDDECGAMGGCRLW----WMLN----SLGA-DAYVINGGFQACKAAGLEMESGEPSSL 149 (373)
T ss_dssp TCSSSSCEEEECSSTTTTTHHHHH----HHHH----HHTC-CEEEETTTTHHHHTTTCCEECSCCCSC
T ss_pred CCCCCCeEEEEeCCCCchHHHHHH----HHHH----HcCC-eEEEeCCCHHHHHhhcCCcccCCCCcC
Confidence 46789999999 66653332444 4443 4899 999999999999999999998755443
No 50
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.85 E-value=4.6e-22 Score=144.10 Aligned_cols=103 Identities=18% Similarity=0.303 Sum_probs=79.7
Q ss_pred cCHHHHHhhhCCCCeEEEEecCCCccCC----------------CccccceecCCcchh---------HHHHHHHH--Hh
Q 032540 8 ISGSQLLSLKRRPNIAVIDVRDDERSYD----------------GHITGSLHYPSDSFT---------DKIFDLIQ--EV 60 (138)
Q Consensus 8 i~~~~~~~~l~~~~~~liDvR~~~e~~~----------------ghipgAi~ip~~~l~---------~~~~~~~~--~~ 60 (138)
++++++.+++..++ |||||++.||.. ||||||+|+|+.++. ..+...+. .+
T Consensus 146 ~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~ 223 (277)
T 3aay_A 146 AFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGL 223 (277)
T ss_dssp ECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTC
T ss_pred cCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 77999999887654 999999999975 999999999987542 13444333 25
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh-CCCCcccc
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 120 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~-~g~p~~~~ 120 (138)
+++++||+||++|. ++..++ ..|. ..+||++|++|+||+.+|.. +|+|++++
T Consensus 224 ~~~~~iv~yC~~G~-rs~~a~----~~L~---~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 224 DNSKETIAYCRIGE-RSSHTW----FVLR---ELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp CTTSCEEEECSSHH-HHHHHH----HHHH---TTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred CCCCCEEEEcCcHH-HHHHHH----HHHH---HHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 78899999999887 444443 3332 12899999999999999998 89999864
No 51
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.85 E-value=1.2e-21 Score=131.44 Aligned_cols=116 Identities=17% Similarity=0.222 Sum_probs=78.6
Q ss_pred CccccCHHHHHhhhCCC--CeEEEEecCCCccCCCccccceecCCcchhH-----HHH--------HHHHHhcCCCeEEE
Q 032540 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIF--------DLIQEVRGKDTLVF 68 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~--~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-----~~~--------~~~~~~~~~~~iv~ 68 (138)
....|+++++.++++.+ +++|||||+++||+.||||||+|||...+.. .+. .++......+.||+
T Consensus 13 ~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~VVv 92 (157)
T 1whb_A 13 EKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 92 (157)
T ss_dssp CCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTHHHHHHGGGTSSEEEE
T ss_pred cCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHHHHHHHhcCCCCEEEE
Confidence 56789999999999866 7999999999999999999999999876532 111 11111223456999
Q ss_pred EeCCCCCCcHHHHHHHHHHHHHhhhhC----CCc-cEEEeccchhhhhhCCCCccccC
Q 032540 69 HCALSQVRGPTCAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVCRCT 121 (138)
Q Consensus 69 ~c~~g~~~~~~~~~~~~~~L~~~l~~~----G~~-~v~~l~gG~~~w~~~g~p~~~~~ 121 (138)
||.++..++..++. ..+.|.+.|... ||. +|++|+|||.+|... +|.....
T Consensus 93 y~~~~~~~~~~a~~-~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~ 148 (157)
T 1whb_A 93 LDWFSSAKDLQIGT-TLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN 148 (157)
T ss_dssp ECSSCCGGGCCTTC-HHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSC
T ss_pred ECCCCCcccccccc-HHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCC
Confidence 99887531211111 113443323333 454 499999999999885 8776643
No 52
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.85 E-value=7.5e-22 Score=139.69 Aligned_cols=97 Identities=19% Similarity=0.266 Sum_probs=77.1
Q ss_pred ccCHHHHHhhhCCCCeEEEEecCCCccCC----------CccccceecCCcchhHHHHHHHH--HhcCCCeEEEEeCCCC
Q 032540 7 YISGSQLLSLKRRPNIAVIDVRDDERSYD----------GHITGSLHYPSDSFTDKIFDLIQ--EVRGKDTLVFHCALSQ 74 (138)
Q Consensus 7 ~i~~~~~~~~l~~~~~~liDvR~~~e~~~----------ghipgAi~ip~~~l~~~~~~~~~--~~~~~~~iv~~c~~g~ 74 (138)
.++++++.+ +.+|||+|++.||.. ||||||+|+|+.++...- ++.. .++++++||+||++|.
T Consensus 122 ~i~~~e~~~-----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-e~~~~~~~~~~~~iv~~C~~G~ 195 (230)
T 2eg4_A 122 LLTADEAAR-----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-GLLERLGLQPGQEVGVYCHSGA 195 (230)
T ss_dssp BCCHHHHHT-----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-THHHHHTCCTTCEEEEECSSSH
T ss_pred eeCHHHHhh-----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-HHHHhcCCCCCCCEEEEcCChH
Confidence 477888776 578999999999999 999999999998875431 0121 3578899999999987
Q ss_pred CCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 75 VRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 75 ~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
++..++ ..|+ .+| .+|++|+||+.+|..+|+|+++
T Consensus 196 -rs~~a~----~~L~----~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 196 -RSAVAF----FVLR----SLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp -HHHHHH----HHHH----HTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred -HHHHHH----HHHH----HcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 555554 3443 489 8999999999999999999863
No 53
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.85 E-value=1.2e-21 Score=131.54 Aligned_cols=111 Identities=18% Similarity=0.232 Sum_probs=75.5
Q ss_pred CccccCHHHHHhhhCCC--CeEEEEecCCCccCCCccccceecCCcchhH-----HHHH--------HHHHhcCCCeEEE
Q 032540 4 SISYISGSQLLSLKRRP--NIAVIDVRDDERSYDGHITGSLHYPSDSFTD-----KIFD--------LIQEVRGKDTLVF 68 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~--~~~liDvR~~~e~~~ghipgAi~ip~~~l~~-----~~~~--------~~~~~~~~~~iv~ 68 (138)
....|+++++.++++.+ +++|||||+++||+.||||||+|||...+.. .+.. ++....+.+.||+
T Consensus 18 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 18 GSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp -CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHHTTTTSSEEEE
T ss_pred CCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCHHHHHHHHhcCCCCEEEE
Confidence 56789999999998765 7999999999999999999999999875532 1111 1111123456899
Q ss_pred EeCCCCCCc---HHHHHHHHHHHHHhhhhC----CCc-cEEEeccchhhhhhCCCCccc
Q 032540 69 HCALSQVRG---PTCAKRLANYLDEVKEDT----GIN-SIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 69 ~c~~g~~~~---~~~~~~~~~~L~~~l~~~----G~~-~v~~l~gG~~~w~~~g~p~~~ 119 (138)
||.+|..++ ..++ +.|...|... ||. +|++|+|||.+|... +|...
T Consensus 98 y~~~~~~~~~~a~~~l----~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~ 151 (157)
T 2gwf_A 98 LDWFSSAKDLQIGTTL----RSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYT 151 (157)
T ss_dssp ECSSCCGGGCCTTCHH----HHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGB
T ss_pred EcCCCCccccCcccHH----HHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhhc
Confidence 998875312 2223 2333222233 344 499999999999874 77654
No 54
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.84 E-value=2.2e-21 Score=130.23 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=73.8
Q ss_pred CccccCHHHHHhhhC--------CCCeEEEEecCCCccCCCccccceecCCcchhH--HHHH--H--HHHh---------
Q 032540 4 SISYISGSQLLSLKR--------RPNIAVIDVRDDERSYDGHITGSLHYPSDSFTD--KIFD--L--IQEV--------- 60 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~--------~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~--~~~~--~--~~~~--------- 60 (138)
.+..|+++++.+++. .++.+|||||++.||..||||||+|+|+..+.. .+.. + ...+
T Consensus 9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (158)
T 3tg1_B 9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSF 88 (158)
T ss_dssp --CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSS
T ss_pred CCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHH
Confidence 578899999999997 346899999999999999999999999998631 1111 0 0001
Q ss_pred --cCCCeEEEEeCCCCCCc-----HHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCC
Q 032540 61 --RGKDTLVFHCALSQVRG-----PTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGK 115 (138)
Q Consensus 61 --~~~~~iv~~c~~g~~~~-----~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~ 115 (138)
..+++||+||++|.+.. .. +..++..| +..|| +|++|+|||.+|.....
T Consensus 89 ~~~~~~~IVvyc~~g~~~~~~~~~~~-s~~a~~~L----~~~G~-~v~~L~GG~~~W~~~~p 144 (158)
T 3tg1_B 89 KRIFSKEIIVYDENTNEPSRVMPSQP-LHIVLESL----KREGK-EPLVLKGGLSSFKQNHE 144 (158)
T ss_dssp TTTTTSCEEEECSCCSCTTSCCSSSH-HHHHHHHH----HTTTC-CEEEETTHHHHHTSSCG
T ss_pred hccCCCeEEEEECCCCcccccCcchH-HHHHHHHH----HhCCC-cEEEeCCcHHHHHHHhh
Confidence 13689999999986210 11 11223445 34899 79999999999977643
No 55
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=9.2e-21 Score=144.77 Aligned_cols=108 Identities=18% Similarity=0.291 Sum_probs=84.8
Q ss_pred cccCHHHHHhhhC--------CCCeEEEEec--CCCccCCCccccceecCCcchhH----------HHHHHHHH--hcCC
Q 032540 6 SYISGSQLLSLKR--------RPNIAVIDVR--DDERSYDGHITGSLHYPSDSFTD----------KIFDLIQE--VRGK 63 (138)
Q Consensus 6 ~~i~~~~~~~~l~--------~~~~~liDvR--~~~e~~~ghipgAi~ip~~~l~~----------~~~~~~~~--~~~~ 63 (138)
..++++++.+++. .++.+|||+| ++.+|..||||||+|+|+.++.. .+...+.. ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 4588999998876 3478999999 99999999999999999987643 23333332 4678
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCC
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (138)
++||+||++|. ++..++ ..|+ .+||++|++|+||+.+|...|+|++++..
T Consensus 204 ~~ivvyC~~G~-~a~~~~----~~L~----~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~ 253 (423)
T 2wlr_A 204 TTVILYGRDVY-AAARVA----QIML----YAGVKDVRLLDGGWQTWSDAGLPVERGTP 253 (423)
T ss_dssp SEEEEECSSHH-HHHHHH----HHHH----HHTCSCEEEETTTHHHHHHTTCCCBCSSC
T ss_pred CeEEEECCCch-HHHHHH----HHHH----HcCCCCeEEECCCHHHHhhCCCCcccCCC
Confidence 99999999775 444443 3443 48999999999999999999999998543
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.82 E-value=3.3e-21 Score=151.21 Aligned_cols=95 Identities=19% Similarity=0.353 Sum_probs=79.3
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
.++.|+++++.++ .++.+|||||++.||..+|||||+|+|+++|...+..+ +++++||+||++|. |+..++
T Consensus 471 ~~~~i~~~~~~~~--~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~~----~~~~~iv~~c~~g~-rs~~a~-- 541 (565)
T 3ntd_A 471 DATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHEL----PKDKEIIIFSQVGL-RGNVAY-- 541 (565)
T ss_dssp SCCEECTTTTTSC--CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGGS----CTTSEEEEECSSSH-HHHHHH--
T ss_pred ccceeeHHHHHhC--CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhhc----CCcCeEEEEeCCch-HHHHHH--
Confidence 3566888888777 45799999999999999999999999999887665554 78899999999887 665555
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCC
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g 114 (138)
..|+. .|| +|++|+||+.+|.++|
T Consensus 542 --~~l~~----~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 542 --RQLVN----NGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp --HHHHH----TTC-CEEEETTHHHHHHHTC
T ss_pred --HHHHH----cCC-CEEEEcChHHHHHhCc
Confidence 44543 899 9999999999998875
No 57
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.79 E-value=1.4e-20 Score=148.47 Aligned_cols=96 Identities=24% Similarity=0.373 Sum_probs=79.9
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKR 83 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~ 83 (138)
.++.|+++++.+++++ +.+|||||++.||..||||||+|+|+.++...+.. ++++++||+||++|. ++..++
T Consensus 487 ~~~~i~~~~~~~~~~~-~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~~~----l~~~~~iv~~C~~g~-rs~~a~-- 558 (588)
T 3ics_A 487 FVDTVQWHEIDRIVEN-GGYLIDVREPNELKQGMIKGSINIPLDELRDRLEE----VPVDKDIYITCQLGM-RGYVAA-- 558 (588)
T ss_dssp SCCEECTTTHHHHHHT-TCEEEECSCGGGGGGCBCTTEEECCHHHHTTCGGG----SCSSSCEEEECSSSH-HHHHHH--
T ss_pred ccceecHHHHHHHhcC-CCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHHhh----CCCCCeEEEECCCCc-HHHHHH--
Confidence 5678999999999864 58999999999999999999999998877655544 378899999999886 665555
Q ss_pred HHHHHHHhhhhCCCccEEEeccchhhhhhCC
Q 032540 84 LANYLDEVKEDTGINSIFVLERGFKGWEASG 114 (138)
Q Consensus 84 ~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g 114 (138)
..|+. .||+ |++|+||+.+|.++.
T Consensus 559 --~~l~~----~G~~-v~~l~GG~~~w~~~~ 582 (588)
T 3ics_A 559 --RMLME----KGYK-VKNVDGGFKLYGTVL 582 (588)
T ss_dssp --HHHHH----TTCC-EEEETTHHHHHHHHC
T ss_pred --HHHHH----cCCc-EEEEcchHHHHHhhh
Confidence 45543 8997 999999999998753
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.78 E-value=1.8e-19 Score=127.38 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=68.6
Q ss_pred CCCeEEEEecCCCccCCCccccceecCCc--chh-----------HHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHH
Q 032540 19 RPNIAVIDVRDDERSYDGHITGSLHYPSD--SFT-----------DKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLA 85 (138)
Q Consensus 19 ~~~~~liDvR~~~e~~~ghipgAi~ip~~--~l~-----------~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~ 85 (138)
.++.+|||+|++.+|..||||||+|+|+. ++. ..+......++.+++||+||++|..++..++
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~---- 79 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTA---- 79 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHH----
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHH----
Confidence 34689999999999999999999999998 432 2344444445568899999998763333332
Q ss_pred HHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCCCc
Q 032540 86 NYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVP 124 (138)
Q Consensus 86 ~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~~~ 124 (138)
+. |+ .||++|++|+|| |.. +|++++...+
T Consensus 80 ~~----L~-~G~~~v~~l~GG---W~~--~p~~~~~~~~ 108 (230)
T 2eg4_A 80 FF----LG-LGGLEVQLWTEG---WEP--YATEKEEPKP 108 (230)
T ss_dssp HH----HH-HTTCCEEEECSS---CGG--GCCBCSCCCC
T ss_pred HH----HH-cCCceEEEeCCC---Ccc--CcccCCCCCc
Confidence 33 35 799999999999 977 8887755444
No 59
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.78 E-value=4.2e-20 Score=139.18 Aligned_cols=93 Identities=19% Similarity=0.352 Sum_probs=71.9
Q ss_pred CCCeEEEEecCCCccC-----------CCccccceecCCcchh------------HHHHHHHHH----hcC---CCeEEE
Q 032540 19 RPNIAVIDVRDDERSY-----------DGHITGSLHYPSDSFT------------DKIFDLIQE----VRG---KDTLVF 68 (138)
Q Consensus 19 ~~~~~liDvR~~~e~~-----------~ghipgAi~ip~~~l~------------~~~~~~~~~----~~~---~~~iv~ 68 (138)
.++.+|||||++.||. .||||||+|||+.++. ..+...+.. +++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4467899999999999 9999999999998764 124444443 256 889999
Q ss_pred EeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh-CCCCcccc
Q 032540 69 HCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA-SGKPVCRC 120 (138)
Q Consensus 69 ~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~-~g~p~~~~ 120 (138)
||++|. |+..++ ..|. .+||++|++|+||+.+|.. .++|++++
T Consensus 252 yC~sG~-rs~~a~----~~L~----~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 252 SCGSGV-TACINI----ALVH----HLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp ECSSSS-THHHHH----HHHH----HTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred ECCchH-HHHHHH----HHHH----HcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 999998 665554 3343 4899999999999999987 68887764
No 60
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.77 E-value=1.8e-20 Score=144.72 Aligned_cols=87 Identities=20% Similarity=0.401 Sum_probs=0.0
Q ss_pred HHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhh
Q 032540 13 LLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVK 92 (138)
Q Consensus 13 ~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l 92 (138)
+.+++++++.+|||||++.||..||||||+|+|+.++...+..+ +++++||+||++|. ++..++ ..|+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~~l----~~~~~iv~~C~~G~-rs~~a~----~~L~--- 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPF----NKNDVIYVHCQSGI-RSSIAI----GILE--- 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHHhhC----CCCCeEEEECCCCh-HHHHHH----HHHH---
Confidence 44555556789999999999999999999999999987766654 78899999999988 555554 3443
Q ss_pred hhCCCccEEEeccchhhhhh
Q 032540 93 EDTGINSIFVLERGFKGWEA 112 (138)
Q Consensus 93 ~~~G~~~v~~l~gG~~~w~~ 112 (138)
..||++|++|+||+.+|.+
T Consensus 447 -~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 -HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp --------------------
T ss_pred -HcCCCCEEEecChHHHHhh
Confidence 4899999999999999975
No 61
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.9e-17 Score=122.64 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=82.0
Q ss_pred ccccCHHHHHhhhCC---CCeEEEEecC---------CCcc-CCCccccceecCCcchh-------------HHHHHHHH
Q 032540 5 ISYISGSQLLSLKRR---PNIAVIDVRD---------DERS-YDGHITGSLHYPSDSFT-------------DKIFDLIQ 58 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~---~~~~liDvR~---------~~e~-~~ghipgAi~ip~~~l~-------------~~~~~~~~ 58 (138)
++-|||++|.+++.. .++++||++= ..|| +++|||||++++++.+. +.+...+.
T Consensus 27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~ 106 (327)
T 3utn_X 27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS 106 (327)
T ss_dssp CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence 346999999999863 3589999972 2355 78999999999887542 23444444
Q ss_pred H--hcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccccCC
Q 032540 59 E--VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTD 122 (138)
Q Consensus 59 ~--~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~~~ 122 (138)
. +.++++||+|++.+...+..++ +.| +..|+++|++|+|| .+|.++|+|++++..
T Consensus 107 ~lGI~~d~~VVvYD~~~~~~AaR~w----W~L----r~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~ 163 (327)
T 3utn_X 107 NLGVQKDDILVVYDRVGNFSSPRCA----WTL----GVMGHPKVYLLNNF-NQYREFKYPLDSSKV 163 (327)
T ss_dssp HTTCCTTCEEEEECSSSSSSHHHHH----HHH----HHTTCSEEEEESCH-HHHHHTTCCCBCCCC
T ss_pred HcCCCCCCEEEEEeCCCCcHHHHHH----HHH----HHcCCCceeecccH-HHHHHhCCCcccCCc
Confidence 4 5788999999998875554443 444 34999999999977 899999999988643
No 62
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.72 E-value=2.5e-18 Score=132.81 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=82.2
Q ss_pred CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcc-hhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHH
Q 032540 4 SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDS-FTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAK 82 (138)
Q Consensus 4 ~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~-l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~ 82 (138)
.++.|+++++.+++.. + +|||+|++.+|..||||||+|+|++. +...+..+. +++++||+||+.|. +..
T Consensus 271 ~~~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l~---~~~~~vvvy~~~~~--~~~--- 340 (474)
T 3tp9_A 271 ERVDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLL---PADRPIHLLAADAI--APD--- 340 (474)
T ss_dssp EECCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHHC---CSSSCEEEECCTTT--HHH---
T ss_pred CCceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhcC---CCCCeEEEEECCCc--HHH---
Confidence 4567999999999876 4 99999999999999999999999984 666666653 67889999998765 222
Q ss_pred HHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCcccc
Q 032540 83 RLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 83 ~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
+++.|+. +||++|+.+.+|+.+|..+|+|+...
T Consensus 341 -~~~~L~~----~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 341 -VIRALRS----IGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp -HHHHHHH----TTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred -HHHHHHH----cCCcceEEecCcHHHHHhcccccccc
Confidence 2355544 99999998667999999998887653
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.65 E-value=3.5e-17 Score=121.17 Aligned_cols=100 Identities=17% Similarity=0.345 Sum_probs=71.5
Q ss_pred cCHHHHHhhhCCC----CeEEEEecCCCccC-----------CCccccceecCCcchh-----------HH----HHHHH
Q 032540 8 ISGSQLLSLKRRP----NIAVIDVRDDERSY-----------DGHITGSLHYPSDSFT-----------DK----IFDLI 57 (138)
Q Consensus 8 i~~~~~~~~l~~~----~~~liDvR~~~e~~-----------~ghipgAi~ip~~~l~-----------~~----~~~~~ 57 (138)
++.+++.+.++.+ +.+|||+|++++|. .||||||+|+|+.++. +. +....
T Consensus 186 ~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~ 265 (327)
T 3utn_X 186 VDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKAL 265 (327)
T ss_dssp ECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHHH
T ss_pred ecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHHH
Confidence 6778888877643 47899999988873 5999999999986542 11 22222
Q ss_pred H----HhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCC
Q 032540 58 Q----EVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKP 116 (138)
Q Consensus 58 ~----~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p 116 (138)
. .++.+++||+||++|. +++.. +++ |+.+||++|.+|+|++.+|.....|
T Consensus 266 ~~~~~gid~~k~vI~yCgsGv-tA~~~--~la------L~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 266 KDFHCTLDPSKPTICSCGTGV-SGVII--KTA------LELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHTTCCCCTTSCEEEECSSSH-HHHHH--HHH------HHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHhhcCCCCCCCEEEECChHH-HHHHH--HHH------HHHcCCCCceeCCCcHHHhccccCC
Confidence 1 2456789999999987 33322 233 2348999999999999999875443
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.32 E-value=3.1e-13 Score=104.29 Aligned_cols=79 Identities=20% Similarity=0.179 Sum_probs=55.8
Q ss_pred CCeEEEEecCCCccCCCccccceecCCc-chhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc
Q 032540 20 PNIAVIDVRDDERSYDGHITGSLHYPSD-SFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (138)
Q Consensus 20 ~~~~liDvR~~~e~~~ghipgAi~ip~~-~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~ 98 (138)
++++|||+|++.+|..||||||+|+|+. .+..++..+ ++++++||+||+. . ++.. +++.|+ .+||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~~~~~~~~~---~~~~~~vvly~~~-~-~a~~----a~~~L~----~~G~~ 361 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWY---LNYDQEINLIGDY-H-LVSK----ATHTLQ----LIGYD 361 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTTHHHHHTTT---CCTTSCEEEESCH-H-HHHH----HHHHHH----TTTCC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHHHHHHHHhc---cCCCCeEEEEECC-c-hHHH----HHHHhh----hhhcc
Confidence 4689999999999999999999999987 455555443 3678999999983 2 2322 334554 49999
Q ss_pred cEEE-eccchhhhh
Q 032540 99 SIFV-LERGFKGWE 111 (138)
Q Consensus 99 ~v~~-l~gG~~~w~ 111 (138)
+|+. ++|+...|.
T Consensus 362 ~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 362 DIAGYQLPQSKIQT 375 (466)
T ss_dssp CEEEEECCC-----
T ss_pred cccccccCcccccH
Confidence 9986 666654443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.17 E-value=1.7e-06 Score=57.22 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=45.8
Q ss_pred ccCHHHHHhhhCCCCeEEEEecCCCcc------------CCC-ccccceecCCcch---hHHHHHHHHHh-cCCCeEEEE
Q 032540 7 YISGSQLLSLKRRPNIAVIDVRDDERS------------YDG-HITGSLHYPSDSF---TDKIFDLIQEV-RGKDTLVFH 69 (138)
Q Consensus 7 ~i~~~~~~~~l~~~~~~liDvR~~~e~------------~~g-hipgAi~ip~~~l---~~~~~~~~~~~-~~~~~iv~~ 69 (138)
.++++++..+.+.+-..|||+|+..|. ..+ +|.|.+|+|+... ...+..+.+.+ ..+.+|+||
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~~~~~~~~~~~l~~~~~pVlvH 108 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAY 108 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCCHHHHHHHHHHHHTSCSSEEEE
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCCHHHHHHHHHHHHhCCCCEEEE
Confidence 356677766655444689999987662 233 5888999998642 11233333333 246899999
Q ss_pred eCCCCCCcH
Q 032540 70 CALSQVRGP 78 (138)
Q Consensus 70 c~~g~~~~~ 78 (138)
|.+|. |+.
T Consensus 109 C~sG~-Rs~ 116 (156)
T 2f46_A 109 CRTGT-RCS 116 (156)
T ss_dssp CSSSH-HHH
T ss_pred CCCCC-CHH
Confidence 99998 544
No 66
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=95.42 E-value=0.0014 Score=43.81 Aligned_cols=25 Identities=32% Similarity=0.304 Sum_probs=22.1
Q ss_pred eEEEEecCCCccCCCccccceecCCcchh
Q 032540 22 IAVIDVRDDERSYDGHITGSLHYPSDSFT 50 (138)
Q Consensus 22 ~~liDvR~~~e~~~ghipgAi~ip~~~l~ 50 (138)
.++||||...||. |||+|||...|+
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE 146 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVE 146 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHH
Confidence 4899999999999 999999987654
No 67
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=94.97 E-value=0.1 Score=33.22 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=38.8
Q ss_pred CHHHHHhhhCCCCeEEEEecCCCccCCCccccc--eecCCcch--------hHHHHHHHHHhcCCCeEEEEeCCCCCCcH
Q 032540 9 SGSQLLSLKRRPNIAVIDVRDDERSYDGHITGS--LHYPSDSF--------TDKIFDLIQEVRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 9 ~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgA--i~ip~~~l--------~~~~~~~~~~~~~~~~iv~~c~~g~~~~~ 78 (138)
+++++..+.+.+=..|||+|+..+......+|- +++|..+. ...+..+......+.+|+|+|..|..|+.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg 103 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG 103 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH
Confidence 455555554444457999999766433333332 34454321 11222222223567899999999974543
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=94.51 E-value=0.27 Score=31.08 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=38.2
Q ss_pred CHHHHHhhhCCCCeEEEEecCCCccCCCcccc--ceecCCcc--------hhHHHHHHHHHhcCCCeEEEEeCCCCCCcH
Q 032540 9 SGSQLLSLKRRPNIAVIDVRDDERSYDGHITG--SLHYPSDS--------FTDKIFDLIQEVRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 9 ~~~~~~~~l~~~~~~liDvR~~~e~~~ghipg--Ai~ip~~~--------l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~ 78 (138)
+.+++..+.+.+=..|||+|+..++.....++ -.++|..+ +...+..+.+....+.+|+|+|..|..|+.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~Rsg 104 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTG 104 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHH
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCCChHH
Confidence 34444444334445799999886654322222 34455432 112222222223467899999999975554
Q ss_pred H
Q 032540 79 T 79 (138)
Q Consensus 79 ~ 79 (138)
.
T Consensus 105 ~ 105 (151)
T 2img_A 105 T 105 (151)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=92.84 E-value=0.24 Score=31.58 Aligned_cols=72 Identities=11% Similarity=0.189 Sum_probs=37.4
Q ss_pred CHHHHHhhhCCCCeEEEEecCCCccCCC--cc--cc--ceecCCcc-------hh-HHHHHHHHHh--cCCCeEEEEeCC
Q 032540 9 SGSQLLSLKRRPNIAVIDVRDDERSYDG--HI--TG--SLHYPSDS-------FT-DKIFDLIQEV--RGKDTLVFHCAL 72 (138)
Q Consensus 9 ~~~~~~~~l~~~~~~liDvR~~~e~~~g--hi--pg--Ai~ip~~~-------l~-~~~~~~~~~~--~~~~~iv~~c~~ 72 (138)
+.+++..+.+.+=..|||+|+..+.... .. .| -+++|..+ +. ..+.++.+.+ ..+.+|+++|..
T Consensus 22 ~~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a 101 (151)
T 1xri_A 22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR 101 (151)
T ss_dssp CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred CccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCCeEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 4445444333334589999987664210 00 11 24555432 11 2333333322 246799999999
Q ss_pred CCCCcHHH
Q 032540 73 SQVRGPTC 80 (138)
Q Consensus 73 g~~~~~~~ 80 (138)
|..|+...
T Consensus 102 G~~RTg~~ 109 (151)
T 1xri_A 102 GKHRTGCL 109 (151)
T ss_dssp SSSHHHHH
T ss_pred CCCHHHHH
Confidence 97555443
No 70
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=91.70 E-value=0.23 Score=35.94 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=19.3
Q ss_pred ccccCHHHHHhhhCCCCeEEEEecCCCc
Q 032540 5 ISYISGSQLLSLKRRPNIAVIDVRDDER 32 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~~~liDvR~~~e 32 (138)
+..++++++..+.+.+=..|||.|+..|
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E 80 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSRE 80 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHH
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhh
Confidence 4457788877665434457999998765
No 71
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=91.07 E-value=2.3 Score=28.15 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=38.0
Q ss_pred cCHHHHHhhhCCCC-eEEEEecCCCcc----CCCccccceecCCc--------chhHHHHHHHHH--hcCCCeEEEEeCC
Q 032540 8 ISGSQLLSLKRRPN-IAVIDVRDDERS----YDGHITGSLHYPSD--------SFTDKIFDLIQE--VRGKDTLVFHCAL 72 (138)
Q Consensus 8 i~~~~~~~~l~~~~-~~liDvR~~~e~----~~ghipgAi~ip~~--------~l~~~~~~~~~~--~~~~~~iv~~c~~ 72 (138)
-+.++..+.+...+ ..|||++...+. ...+| .-+++|.. .+...+..+... ...+.+|+|+|..
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~d~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC~a 126 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVA 126 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCCSSSCCCSHHHHHHHHHHHHHHHHSTTCEEEEECSS
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCCCCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCC
Confidence 45566666665444 479999976431 11111 11234421 122222222211 2567899999999
Q ss_pred CCCCcHHH
Q 032540 73 SQVRGPTC 80 (138)
Q Consensus 73 g~~~~~~~ 80 (138)
|..|+...
T Consensus 127 G~gRSg~~ 134 (189)
T 3rz2_A 127 GLGRAPVL 134 (189)
T ss_dssp SSTTHHHH
T ss_pred CCCHHHHH
Confidence 97666443
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=90.98 E-value=1.5 Score=28.30 Aligned_cols=56 Identities=13% Similarity=0.217 Sum_probs=29.8
Q ss_pred eEEEEecCCCccCC-CccccceecCCc-----chhHHHH---HHHHH-hcCCCeEEEEeCCCCCCcH
Q 032540 22 IAVIDVRDDERSYD-GHITGSLHYPSD-----SFTDKIF---DLIQE-VRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 22 ~~liDvR~~~e~~~-ghipgAi~ip~~-----~l~~~~~---~~~~~-~~~~~~iv~~c~~g~~~~~ 78 (138)
..|||+|...+... .++ .-+++|.. .+...+. .+++. +..+.+|+|+|..|..|+.
T Consensus 39 ~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg 104 (164)
T 2hcm_A 39 TLCVNVSRQQPGPRAPGV-AELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSA 104 (164)
T ss_dssp EEEEECSSSCCCCCCTTC-EEEECCCCSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHH
T ss_pred eEEEEcCCCCCCCCCCCC-EEEEEeCcCCCCchHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHH
Confidence 47999998653211 111 12345542 2222221 22222 3467899999999975554
No 73
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=89.98 E-value=1.2 Score=28.04 Aligned_cols=19 Identities=11% Similarity=0.256 Sum_probs=14.8
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 79 ~~~~~VlVHC~~G~~RS~~ 97 (145)
T 2nt2_A 79 KHGSKCLVHSKMGVSRSAS 97 (145)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred HcCCeEEEECCCCCchHHH
Confidence 4678999999999756643
No 74
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=89.82 E-value=1.2 Score=28.00 Aligned_cols=18 Identities=11% Similarity=0.217 Sum_probs=14.4
Q ss_pred cCCCeEEEEeCCCCCCcH
Q 032540 61 RGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~ 78 (138)
..+.+|+|+|..|..|+.
T Consensus 79 ~~~~~VlVHC~~G~~RS~ 96 (144)
T 3ezz_A 79 DCRGRVLVHSQAGISRSA 96 (144)
T ss_dssp HTTCCEEEEESSSSSHHH
T ss_pred hcCCeEEEECCCCCChhH
Confidence 466899999999975654
No 75
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=88.75 E-value=2.2 Score=27.52 Aligned_cols=57 Identities=21% Similarity=0.336 Sum_probs=30.2
Q ss_pred eEEEEecCCCccCCCccccceecCCc-----chhH---HHHHHHHH-hcCCCeEEEEeCCCCCCcHH
Q 032540 22 IAVIDVRDDERSYDGHITGSLHYPSD-----SFTD---KIFDLIQE-VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 22 ~~liDvR~~~e~~~ghipgAi~ip~~-----~l~~---~~~~~~~~-~~~~~~iv~~c~~g~~~~~~ 79 (138)
..|||+|+..+....++ .-+++|.. .+.. ..-.+++. ...+.+|+|+|..|..|+..
T Consensus 34 ~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~ 99 (165)
T 1wrm_A 34 THILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVT 99 (165)
T ss_dssp EEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHH
T ss_pred cEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHH
Confidence 46999998653221111 12334432 2211 11122222 35678999999999756654
No 76
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=88.66 E-value=3 Score=26.26 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.9
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 81 ~~~~~VlVHC~~G~~RSg~ 99 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSAT 99 (149)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred HcCCeEEEECCCCCCHHHH
Confidence 4678999999999756544
No 77
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=88.44 E-value=1.9 Score=27.65 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=14.8
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 82 ~~~~~VlVHC~aG~~RSg~ 100 (160)
T 1yz4_A 82 LNGGNCLVHSFAGISRSTT 100 (160)
T ss_dssp HTTCCEEEEETTSSSHHHH
T ss_pred HcCCeEEEECCCCCchHHH
Confidence 4678999999999756643
No 78
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=87.98 E-value=1.5 Score=28.03 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=13.6
Q ss_pred CCeEEEEeCCCCCCcHH
Q 032540 63 KDTLVFHCALSQVRGPT 79 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~ 79 (138)
+.+|+|+|..|..|+..
T Consensus 109 ~~~vlVHC~aG~~RTg~ 125 (167)
T 3s4o_A 109 PPTIGVHCVAGLGRAPI 125 (167)
T ss_dssp CCEEEEECSSSSSHHHH
T ss_pred CCcEEEECCCCCCHHHH
Confidence 78999999999755543
No 79
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=87.54 E-value=1.4 Score=27.85 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=35.7
Q ss_pred HHHHhhhCCCC-eEEEEecCCCccCCCcc-------c--cceecCCcch---------hHHHHHHHHHhcCCCeEEEEeC
Q 032540 11 SQLLSLKRRPN-IAVIDVRDDERSYDGHI-------T--GSLHYPSDSF---------TDKIFDLIQEVRGKDTLVFHCA 71 (138)
Q Consensus 11 ~~~~~~l~~~~-~~liDvR~~~e~~~ghi-------p--gAi~ip~~~l---------~~~~~~~~~~~~~~~~iv~~c~ 71 (138)
.+..+++...+ ..|||+|+..+...... . .-+++|..+. ...+..+......+.+|+|+|.
T Consensus 18 ~~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~ 97 (157)
T 3rgo_A 18 NMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCK 97 (157)
T ss_dssp GGHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTTTSSCCHHHHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cchHHHHHHcCCCEEEECccccccccccCCHHHHHHCCCeEEEecCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 34444433223 46999998865432100 0 1234554332 1112222222346689999999
Q ss_pred CCCCCcHH
Q 032540 72 LSQVRGPT 79 (138)
Q Consensus 72 ~g~~~~~~ 79 (138)
.|..|+..
T Consensus 98 ~G~~Rsg~ 105 (157)
T 3rgo_A 98 AGRSRSAT 105 (157)
T ss_dssp SSSSHHHH
T ss_pred CCCChHHH
Confidence 99855543
No 80
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=87.41 E-value=2.1 Score=26.88 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=15.2
Q ss_pred hcCCCeEEEEeCCCCCCcHH
Q 032540 60 VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~ 79 (138)
...+.+|+|+|..|..|+..
T Consensus 78 ~~~~~~VlVHC~~G~sRS~~ 97 (144)
T 3s4e_A 78 KRKDGVVLVHSNAGVSRAAA 97 (144)
T ss_dssp HHTTCCEEEECSSSSSHHHH
T ss_pred HHcCCeEEEEcCCCCchHHH
Confidence 35678999999999866543
No 81
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=87.26 E-value=3.1 Score=27.20 Aligned_cols=17 Identities=29% Similarity=0.616 Sum_probs=13.7
Q ss_pred CCeEEEEeCCCCCCcHH
Q 032540 63 KDTLVFHCALSQVRGPT 79 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~ 79 (138)
+.+|+|+|..|..|+..
T Consensus 115 ~~~VlVHC~~G~~RSg~ 131 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPT 131 (183)
T ss_dssp TCCEEEECSSSSSHHHH
T ss_pred CCeEEEECCCCcchHHH
Confidence 68999999999756544
No 82
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=87.15 E-value=2.6 Score=26.91 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=30.8
Q ss_pred eEEEEecCCC--ccCC-CccccceecCCcch-----hHHHH---HHHHH-hcCCCeEEEEeCCCCCCcHH
Q 032540 22 IAVIDVRDDE--RSYD-GHITGSLHYPSDSF-----TDKIF---DLIQE-VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 22 ~~liDvR~~~--e~~~-ghipgAi~ip~~~l-----~~~~~---~~~~~-~~~~~~iv~~c~~g~~~~~~ 79 (138)
..|||+|+.. .|.. |.+ .-.++|..+. ...+. +++.. ...+.+|+|+|..|..|+..
T Consensus 33 ~~Vi~l~~~~~~~~~~~~~i-~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~ 101 (155)
T 2hxp_A 33 RYILNVTPNLPNFFEKNGDF-HYKQIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVT 101 (155)
T ss_dssp EEEEECSSSCCCTTTTCTTC-EEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEECSSSSSHHHH
T ss_pred CEEEEeCCCCcccccCCCCe-EEEEEECccCCCCCHHHHHHHHHHHHHHHHHcCCcEEEECCCCCchhHH
Confidence 4699999752 2222 112 2345665432 12121 12222 34678999999999756543
No 83
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=87.03 E-value=3.1 Score=27.78 Aligned_cols=58 Identities=17% Similarity=0.351 Sum_probs=30.2
Q ss_pred eEEEEecCCCcc-CCCccccceecCCc-----chh---HHHHHHHHH-hcCCCeEEEEeCCCCCCcHHH
Q 032540 22 IAVIDVRDDERS-YDGHITGSLHYPSD-----SFT---DKIFDLIQE-VRGKDTLVFHCALSQVRGPTC 80 (138)
Q Consensus 22 ~~liDvR~~~e~-~~ghipgAi~ip~~-----~l~---~~~~~~~~~-~~~~~~iv~~c~~g~~~~~~~ 80 (138)
..|||+|+..+. ...++ .-+++|.. .+. ..+..+++. ...+.+|+|+|..|..|+...
T Consensus 75 ~~Vi~l~~~~~~~~~~~~-~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~ 142 (195)
T 2q05_A 75 KYVLNLTMDKYTLPNSNI-NIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAM 142 (195)
T ss_dssp SEEEECSSSCCCCTTCCC-EEEECCCCCSSSCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHH
T ss_pred CEEEEECCCCCCcccCCc-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHH
Confidence 579999986432 21222 12334432 211 122222222 245689999999996555443
No 84
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=86.98 E-value=1.5 Score=27.70 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=13.7
Q ss_pred CCCeEEEEeCCCCCCcH
Q 032540 62 GKDTLVFHCALSQVRGP 78 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~ 78 (138)
.+.+|+|+|..|..|+.
T Consensus 84 ~~~~vlVHC~aG~~RSg 100 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSA 100 (151)
T ss_dssp TTCCEEEECSSSSHHHH
T ss_pred CCCcEEEECCCCCChHH
Confidence 57899999999965554
No 85
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=86.58 E-value=4 Score=27.03 Aligned_cols=19 Identities=21% Similarity=0.417 Sum_probs=15.0
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 95 ~~~~~VLVHC~aG~sRS~~ 113 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAA 113 (188)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred HcCCEEEEECCCCCchHHH
Confidence 4678999999999756643
No 86
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=85.09 E-value=2.4 Score=27.68 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=14.3
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 106 ~~~~~VlVHC~aG~~RSg~ 124 (176)
T 3cm3_A 106 QRNEPVLVHSAAGVNRSGA 124 (176)
T ss_dssp HHTCCEEEECSSSSSHHHH
T ss_pred HCCCcEEEECCcCCCHHHH
Confidence 3468999999999756543
No 87
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=84.28 E-value=3.8 Score=27.22 Aligned_cols=18 Identities=28% Similarity=0.510 Sum_probs=14.4
Q ss_pred cCCCeEEEEeCCCCCCcH
Q 032540 61 RGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~ 78 (138)
..+.+|+|+|..|..|+.
T Consensus 101 ~~~~~VlVHC~aG~~RSg 118 (190)
T 2wgp_A 101 RKHGATLVHCAAGVSRSA 118 (190)
T ss_dssp HTTCCEEEECSSSSSHHH
T ss_pred hcCCCEEEECCCCCCHHH
Confidence 467899999999975654
No 88
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=84.09 E-value=3.5 Score=26.58 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=13.5
Q ss_pred CCCeEEEEeCCCCCCcH
Q 032540 62 GKDTLVFHCALSQVRGP 78 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~ 78 (138)
.+.+|+|+|..|..|+.
T Consensus 112 ~~~~vlVHC~aG~~RTg 128 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTG 128 (169)
T ss_dssp TTSEEEEECSSSSHHHH
T ss_pred CCCcEEEECCCCCChHH
Confidence 57899999999875543
No 89
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=83.62 E-value=1.7 Score=28.39 Aligned_cols=44 Identities=27% Similarity=0.467 Sum_probs=31.7
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
..|+|+|....-||+.|...+...+ ++.|..++.+...|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~----~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRL----KDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHH----HHcCCCCeEEEecccCCcc
Confidence 4699999877778888775554444 3477766778888888873
No 90
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=83.19 E-value=3.1 Score=26.30 Aligned_cols=19 Identities=11% Similarity=0.122 Sum_probs=14.8
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 88 ~~~~~vlvHC~aG~~RS~~ 106 (154)
T 2r0b_A 88 QMGGKVLVHGNAGISRSAA 106 (154)
T ss_dssp HTTCCEEEECSSSSSHHHH
T ss_pred hcCCCEEEEcCCCCChHHH
Confidence 4678999999999756553
No 91
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=83.05 E-value=2.5 Score=28.46 Aligned_cols=20 Identities=10% Similarity=-0.001 Sum_probs=15.0
Q ss_pred hcCCCeEEEEeCCCCCCcHH
Q 032540 60 VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~ 79 (138)
+..+.+|+|+|..|..|+..
T Consensus 130 ~~~~~~VlVHC~aG~gRTg~ 149 (212)
T 1fpz_A 130 LKNYRKTLIHSYGGLGRSCL 149 (212)
T ss_dssp HHTTCCEEEECSSSSSHHHH
T ss_pred HhCCCCEEEECCCCCCHHHH
Confidence 34678999999999755543
No 92
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=82.67 E-value=6.6 Score=26.71 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=15.3
Q ss_pred hcCCCeEEEEeCCCCCCcHH
Q 032540 60 VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~ 79 (138)
+..+.+|+|+|..|..|+..
T Consensus 80 ~~~~~~VLVHC~aG~sRSgt 99 (211)
T 2g6z_A 80 REKGGKVLVHSEAGISRSPT 99 (211)
T ss_dssp HHTTCCEEEEESSSSSHHHH
T ss_pred HhcCCeEEEECCCCCCcHHH
Confidence 34678999999999766643
No 93
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=80.08 E-value=8.6 Score=24.04 Aligned_cols=74 Identities=14% Similarity=0.179 Sum_probs=37.8
Q ss_pred ccccCHHHHHhhhCCCC-eEEEEecCCCccC----CCccccceecCCc--------chhHHHHHHHHHh--cCCCeEEEE
Q 032540 5 ISYISGSQLLSLKRRPN-IAVIDVRDDERSY----DGHITGSLHYPSD--------SFTDKIFDLIQEV--RGKDTLVFH 69 (138)
Q Consensus 5 ~~~i~~~~~~~~l~~~~-~~liDvR~~~e~~----~ghipgAi~ip~~--------~l~~~~~~~~~~~--~~~~~iv~~ 69 (138)
....+.+++.+++...+ ..||++++..... ..++ .-+++|.. .+...+..+...+ ..+.+|+|+
T Consensus 24 p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVH 102 (159)
T 1rxd_A 24 PTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVH 102 (159)
T ss_dssp CCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC--CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCcCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 34467778666665333 4688998753211 1111 12334421 1122222221111 346899999
Q ss_pred eCCCCCCcHH
Q 032540 70 CALSQVRGPT 79 (138)
Q Consensus 70 c~~g~~~~~~ 79 (138)
|..|..|+..
T Consensus 103 C~aG~~Rtg~ 112 (159)
T 1rxd_A 103 CVAGLGRAPV 112 (159)
T ss_dssp CSSSSTTHHH
T ss_pred CCCCCCHHHH
Confidence 9999766644
No 94
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=79.75 E-value=10 Score=24.80 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+......+.+++|||++ ...+..++..|. ..|+ .+..+.|++.
T Consensus 35 ~L~~ll~~~~~~~k~lVF~~~-----~~~~~~l~~~L~----~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 35 FLLDLLNATGKDSLTLVFVET-----KKGADSLEDFLY----HEGY-ACTSIHGDRS 81 (185)
T ss_dssp HHHHHHHHC-CCSCEEEEESC-----HHHHHHHHHHHH----HTTC-CEEEEC----
T ss_pred HHHHHHHhcCCCCeEEEEECC-----HHHHHHHHHHHH----HcCC-ceEEEeCCCC
Confidence 344444444456789999964 333445555554 4787 6888888874
No 95
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=79.32 E-value=3.1 Score=27.04 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-cEEEeccchhhh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~v~~l~gG~~~w 110 (138)
...|+|+|....-||+.|...+...+ ...|.. ++.+...|...|
T Consensus 5 ~~~vLFVC~gN~cRSpmAE~~~~~~~----~~~gl~~~~~v~SAGt~~~ 49 (157)
T 3n8i_A 5 TKSVLFVCLGNICRSPIAEAVFRKLV----TDQNISENWRVDSAATSGY 49 (157)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHH----HHTTCGGGEEEEEEESSST
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHH----HHcCCCCcEEEEeeecCcc
Confidence 35799999887778888775555444 347875 577888888888
No 96
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=78.73 E-value=2.3 Score=27.67 Aligned_cols=45 Identities=20% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCC-ccEEEeccchhhhh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI-NSIFVLERGFKGWE 111 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~-~~v~~l~gG~~~w~ 111 (138)
...|+|+|....-||+.|...+...+. +.|. .++.+...|...|.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~----~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLK----ERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHH----HHTCTTTEEEEEEESSCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHH----HcCCCCcEEEEecccCCCc
Confidence 357999998877788887755554443 3566 36778888988873
No 97
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=78.31 E-value=3.3 Score=26.87 Aligned_cols=43 Identities=12% Similarity=0.133 Sum_probs=31.4
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-c-EEEeccchhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-S-IFVLERGFKGW 110 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~-v~~l~gG~~~w 110 (138)
..|+|+|....-||+.|...+...+ ...|.. + +.+...|...|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~----~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEV----EKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHH----HHcCCCCCeEEEEeccccCC
Confidence 5699999887778888775555444 347774 3 77888888887
No 98
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=77.88 E-value=2.2 Score=27.63 Aligned_cols=42 Identities=17% Similarity=0.383 Sum_probs=29.9
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-cEEEeccchhhh
Q 032540 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (138)
Q Consensus 65 ~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~v~~l~gG~~~w 110 (138)
.|+|+|....-||+.|...+...+. ..|.. ++.+...|...|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~----~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVK----KANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHH----HHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHH----hCCCCCcEEEEeeecCCc
Confidence 6899998877788887755554443 35664 577788888887
No 99
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=77.67 E-value=10 Score=25.34 Aligned_cols=18 Identities=28% Similarity=0.593 Sum_probs=14.3
Q ss_pred CCCeEEEEeCCCCCCcHH
Q 032540 62 GKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~ 79 (138)
.+.+|+|+|..|..|+..
T Consensus 130 ~~~~VLVHC~aG~sRS~t 147 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSAT 147 (205)
T ss_dssp TTCCEEEECSSSSSHHHH
T ss_pred CCCeEEEECCCCCcHHHH
Confidence 568999999999756643
No 100
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=77.57 E-value=13 Score=24.59 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=15.5
Q ss_pred hcCCCeEEEEeCCCCCCcHH
Q 032540 60 VRGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~ 79 (138)
+..+.+|+|+|..|..|+..
T Consensus 114 ~~~g~~VLVHC~~G~sRS~t 133 (182)
T 2j16_A 114 TTKREKILIHAQCGLSRSAT 133 (182)
T ss_dssp HHTTCCEEEEESSCCSHHHH
T ss_pred HhcCCeEEEECCCCCChHHH
Confidence 35678999999999766644
No 101
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=76.72 E-value=3.8 Score=26.65 Aligned_cols=43 Identities=26% Similarity=0.479 Sum_probs=31.0
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-cEEEeccchhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~v~~l~gG~~~w 110 (138)
..|+|+|....-||+.|...+...+ +..|.. ++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~----~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQL----RHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHH----HHCCCCCcEEEEecccCCC
Confidence 5799999887778888775555444 346654 577888888887
No 102
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=76.47 E-value=3.9 Score=30.13 Aligned_cols=68 Identities=7% Similarity=0.053 Sum_probs=34.6
Q ss_pred HHHHHhhhCC-CCeEEEEecCCCccCCCccc--c--ceecCCcc----hhHHHHHHHHHh-cCCCeEEEEeCCCCCCcH
Q 032540 10 GSQLLSLKRR-PNIAVIDVRDDERSYDGHIT--G--SLHYPSDS----FTDKIFDLIQEV-RGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 10 ~~~~~~~l~~-~~~~liDvR~~~e~~~ghip--g--Ai~ip~~~----l~~~~~~~~~~~-~~~~~iv~~c~~g~~~~~ 78 (138)
+++..+.++. +=..|||+|... |....++ | -+++|..+ -.+.+..+.+.+ ..+.+|+|+|..|..|+.
T Consensus 207 ~~~~~~~L~~~GI~~VInL~~~~-y~~~~~~~~gi~~~~ipi~D~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gRTG 284 (348)
T 1ohe_A 207 PETYIQYFKNHNVTTIIRLNKRM-YDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTG 284 (348)
T ss_dssp THHHHHHHHHTTEEEEEECSCCS-SCTHHHHTTTCEEEECCCCTTCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCc-CChhhhhcCCcEEEEecCCCCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCChHH
Confidence 4444444443 334799999652 2221111 1 23444432 111233333332 457899999999974543
No 103
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=75.77 E-value=3.9 Score=26.62 Aligned_cols=43 Identities=14% Similarity=0.286 Sum_probs=31.1
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-cEEEeccchhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~v~~l~gG~~~w 110 (138)
..|+|+|....-||+.|...+...+ ++.|.. ++.+...|...|
T Consensus 5 ~~vLFVC~gN~cRSpmAE~~~~~~~----~~~gl~~~~~v~SAGt~~~ 48 (161)
T 3jvi_A 5 MKLLFVCLGNICRSPAAEAVMKKVI----QNHHLTEKYICDSAGTCSY 48 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHTTCGGGEEEEEEESCCT
T ss_pred cEEEEECCCchhHHHHHHHHHHHHH----HHcCCCCcEEEEeeecCCc
Confidence 4699999877778888775555444 347763 677888888887
No 104
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=74.70 E-value=4 Score=24.87 Aligned_cols=31 Identities=13% Similarity=0.264 Sum_probs=21.2
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~ 98 (138)
..|++.|.+|...+...+ ..+++.+++.|++
T Consensus 22 kkIlvvC~sG~gTS~ll~----~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAA----EEIKELCQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHH----HHHHHHHHHTTCC
T ss_pred cEEEEECCCCHHHHHHHH----HHHHHHHHHcCCe
Confidence 579999999985444444 4555555669985
No 105
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=73.00 E-value=7.9 Score=23.25 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=21.2
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~ 98 (138)
+.-.|++.|.+|...+ ..+.. +++.+++.|++
T Consensus 3 ~~mkIlvvC~~G~~TS-ll~~k----l~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTS-MLVQR----IEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSC-HHHHH----HHHHHHHHTCS
T ss_pred CceEEEEECCChHhHH-HHHHH----HHHHHHHCCCC
Confidence 3345999999999666 55544 44444558873
No 106
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=72.99 E-value=4.1 Score=27.25 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=30.5
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
..|+|+|....-||+.|...+...+ ...|. ++.+...|..+|.
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~----~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIA----EREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHHTC-CEEEEEEETTCCT
T ss_pred CEEEEECCCchhHHHHHHHHHHHHH----HhcCC-cEEEEeeecCCcC
Confidence 5799999887778887765554444 33563 6778888888874
No 107
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=71.73 E-value=11 Score=24.03 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=35.0
Q ss_pred ccCHHHHHhhhCCCCeEEEEecCCCccCC-----Ccc--cc--ceecCCcc--h-hHHHHHHHHHh--cCCCeEEEEeCC
Q 032540 7 YISGSQLLSLKRRPNIAVIDVRDDERSYD-----GHI--TG--SLHYPSDS--F-TDKIFDLIQEV--RGKDTLVFHCAL 72 (138)
Q Consensus 7 ~i~~~~~~~~l~~~~~~liDvR~~~e~~~-----ghi--pg--Ai~ip~~~--l-~~~~~~~~~~~--~~~~~iv~~c~~ 72 (138)
.++.+.+..+.+.+--++|+.|+..+-.. ..+ .| .+.+|.+. . .+.+..+.+.+ ..+++|+|+|.+
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnnAg 106 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHCLA 106 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEECSB
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 35666666666555457888887654321 011 12 34566531 1 12333333222 123489999987
Q ss_pred CC
Q 032540 73 SQ 74 (138)
Q Consensus 73 g~ 74 (138)
+.
T Consensus 107 g~ 108 (157)
T 3gxh_A 107 NY 108 (157)
T ss_dssp SH
T ss_pred CC
Confidence 65
No 108
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=70.22 E-value=12 Score=23.91 Aligned_cols=19 Identities=11% Similarity=0.267 Sum_probs=14.9
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 85 ~~~~~VlVHC~~G~sRS~~ 103 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPA 103 (161)
T ss_dssp HTTCEEEEEESSSSSHHHH
T ss_pred hcCCeEEEEcCCCCcHHHH
Confidence 4668999999999866543
No 109
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=69.01 E-value=3.5 Score=25.70 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=21.1
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCC
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGI 97 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~ 97 (138)
+-..|++.|++|...+...+ ..|++.++..|+
T Consensus 12 ~~kkIlvVC~sGmgTS~ml~----~klkk~~~e~gi 43 (125)
T 1vkr_A 12 HVRKIIVACDAGMGSSAMGA----GVLRKKIQDAGL 43 (125)
T ss_dssp CCCEEEECCSSSSHHHHHHH----HHHHHHHHHTTC
T ss_pred cccEEEEECCCcHHHHHHHH----HHHHHHHHHCCC
Confidence 34679999999984444433 455555566887
No 110
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=65.84 E-value=13 Score=24.37 Aligned_cols=52 Identities=12% Similarity=0.205 Sum_probs=33.6
Q ss_pred HHHHHHhcCCCeEEEEeCCCCCC-cHHHHHHHHHHHHHhhhhCCCccEEEeccchhhh
Q 032540 54 FDLIQEVRGKDTLVFHCALSQVR-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (138)
Q Consensus 54 ~~~~~~~~~~~~iv~~c~~g~~~-~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w 110 (138)
..+...++++..+|+.|..|..- +...+.++.. +...|..++.++.||-.+.
T Consensus 65 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~-----~~~~g~~~i~FvIGG~~Gl 117 (163)
T 4fak_A 65 QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQ-----RMTQGQSDFVFVIGGSNGL 117 (163)
T ss_dssp HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHH-----HHHTTCCEEEEEECBTTBC
T ss_pred HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHH-----HHhcCCcceEEEEECCCcc
Confidence 34455567788889989887633 3334433332 2346888999999986654
No 111
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=65.37 E-value=33 Score=25.14 Aligned_cols=69 Identities=7% Similarity=0.029 Sum_probs=36.2
Q ss_pred CHHHHHhhhC---CCCeEEEEecCCCccCCCccccc-eecCCc--------chhHHHHHHHHHh--cCCCeEEEEeCCCC
Q 032540 9 SGSQLLSLKR---RPNIAVIDVRDDERSYDGHITGS-LHYPSD--------SFTDKIFDLIQEV--RGKDTLVFHCALSQ 74 (138)
Q Consensus 9 ~~~~~~~~l~---~~~~~liDvR~~~e~~~ghipgA-i~ip~~--------~l~~~~~~~~~~~--~~~~~iv~~c~~g~ 74 (138)
..+++...++ .+.+.|++++++..|......+. .++|+. .+...+..+..-+ .++..++|+|..|.
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~ 130 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGK 130 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEECSSSS
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3455555553 55799999987666654433322 222221 1211122221111 34478999999886
Q ss_pred CCc
Q 032540 75 VRG 77 (138)
Q Consensus 75 ~~~ 77 (138)
.|+
T Consensus 131 gRt 133 (339)
T 3v0d_A 131 GRT 133 (339)
T ss_dssp HHH
T ss_pred cch
Confidence 443
No 112
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=64.97 E-value=15 Score=23.87 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.9
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 85 ~~~~~VlVHC~aG~~RSg~ 103 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSAT 103 (177)
T ss_dssp HTTCEEEEECSSSSSHHHH
T ss_pred hcCCcEEEEcCCCCCchHH
Confidence 4678999999999756544
No 113
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=64.69 E-value=13 Score=22.35 Aligned_cols=37 Identities=3% Similarity=0.016 Sum_probs=22.8
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccc
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERG 106 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG 106 (138)
..|++.|.+|...| ..+. .+.+.+++.|++ +.+-..+
T Consensus 4 kkIll~Cg~G~sTS-~l~~----k~~~~~~~~gi~-~~i~a~~ 40 (106)
T 1e2b_A 4 KHIYLFSSAGMSTS-LLVS----KMRAQAEKYEVP-VIIEAFP 40 (106)
T ss_dssp EEEEEECSSSTTTH-HHHH----HHHHHHHHSCCS-EEEEEEC
T ss_pred cEEEEECCCchhHH-HHHH----HHHHHHHHCCCC-eEEEEec
Confidence 46999999998444 4443 444445569984 4443333
No 114
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=63.68 E-value=5.3 Score=24.13 Aligned_cols=31 Identities=6% Similarity=0.098 Sum_probs=20.6
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~ 98 (138)
..|++.|.+|...+..+. ..|++.+++.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~----~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIK----MKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHH----HHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHH----HHHHHHHHHcCCC
Confidence 569999998874443333 4555556678985
No 115
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=62.73 E-value=11 Score=24.69 Aligned_cols=43 Identities=21% Similarity=0.451 Sum_probs=28.7
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc-cEEEeccchhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN-SIFVLERGFKGW 110 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~-~v~~l~gG~~~w 110 (138)
..|+|+|-+..-||+.|...+...+ ++.|.. ++.+-.-|..+|
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~----~~~gl~~~~~v~SAGt~~~ 62 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLA----AKKGLEGKIKADSAGIGGW 62 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHH----HHTTCTTTEEEEEEESSCT
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHH----HHcCCCCceEEeccccccC
Confidence 3699999766567777764444444 446764 467777788777
No 116
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=61.08 E-value=22 Score=24.06 Aligned_cols=19 Identities=21% Similarity=0.613 Sum_probs=14.7
Q ss_pred cCCCeEEEEeCCCCCCcHH
Q 032540 61 RGKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~ 79 (138)
..+.+|+|+|..|..|+..
T Consensus 137 ~~~~~VLVHC~aG~sRS~t 155 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSAT 155 (219)
T ss_dssp STTCCEEEECSSSSSHHHH
T ss_pred ccCCeEEEECCCCCCHHHH
Confidence 4568999999999756544
No 117
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=57.49 E-value=13 Score=26.06 Aligned_cols=33 Identities=12% Similarity=0.302 Sum_probs=20.1
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
.+|+++|+.|+ ++-.+ ..+++.|.. .|| +|.++
T Consensus 86 ~~vlVlcG~GN-NGGDG-lv~AR~L~~----~G~-~V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHV-KGAQG-ISCGRHLAN----HDV-QVILF 118 (259)
T ss_dssp CEEEEEECSSH-HHHHH-HHHHHHHHH----TTC-EEEEE
T ss_pred CeEEEEECCCC-CHHHH-HHHHHHHHH----CCC-eEEEE
Confidence 48999999887 43322 133445544 899 56544
No 118
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=56.35 E-value=14 Score=25.82 Aligned_cols=48 Identities=15% Similarity=0.071 Sum_probs=27.8
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe-ccc----------hhhhhhCCCCcc
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL-ERG----------FKGWEASGKPVC 118 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l-~gG----------~~~w~~~g~p~~ 118 (138)
.+|+|+|..|+ .+-.+ ..+++.|.. .|| +|.++ -+. +..|...|.++.
T Consensus 59 ~~v~VlcG~GN-NGGDG-lv~AR~L~~----~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGN-NGGDG-LVCARHLKL----FGY-NPVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSH-HHHHH-HHHHHHHHH----TTC-CEEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCC-CHHHH-HHHHHHHHH----CCC-eEEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 33322 233445544 899 56543 322 344566676654
No 119
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=56.35 E-value=25 Score=22.46 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=24.6
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
...++++||++ ...+..++..|. ..|+ .+..+.|++.
T Consensus 33 ~~~~~lVF~~~-----~~~~~~l~~~L~----~~~~-~~~~~~g~~~ 69 (175)
T 2rb4_A 33 TIGQAIIFCQT-----RRNAKWLTVEMI----QDGH-QVSLLSGELT 69 (175)
T ss_dssp CCSEEEEECSC-----HHHHHHHHHHHH----TTTC-CEEEECSSCC
T ss_pred CCCCEEEEECC-----HHHHHHHHHHHH----HcCC-cEEEEeCCCC
Confidence 34689999964 333445555554 4887 6888998863
No 120
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=56.22 E-value=28 Score=26.98 Aligned_cols=50 Identities=14% Similarity=0.145 Sum_probs=29.6
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe-ccc---------hhhhhhCCCCcc
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL-ERG---------FKGWEASGKPVC 118 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l-~gG---------~~~w~~~g~p~~ 118 (138)
...+|+|+|..|+ ++-.. ..+++.| ...|| +|.++ -+. +..|.+.|.++.
T Consensus 51 ~~~~v~VlcG~GN-NGGDG-lv~AR~L----~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGN-NGGDG-FVVARNL----LGVVK-DVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSH-HHHHH-HHHHHHH----TTTSS-EEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCC-CHHHH-HHHHHHH----HHCCC-eEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999887 44222 1233444 34899 45433 221 345777787765
No 121
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=55.95 E-value=20 Score=25.57 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=13.9
Q ss_pred CCCeEEEEeCCCCCCcHH
Q 032540 62 GKDTLVFHCALSQVRGPT 79 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~ 79 (138)
.+.+|+|+|..|..|+..
T Consensus 105 ~g~~VLVHC~aG~sRS~t 122 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPA 122 (294)
T ss_dssp HCSEEEEECSSSSSHHHH
T ss_pred CCCEEEEECCCCCchhHH
Confidence 467899999999766543
No 122
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=55.45 E-value=15 Score=24.33 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=29.0
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
.-.|+|+|....-||+.|...+...+ +..|- ++.+..-|...|.
T Consensus 34 ~mkVLFVC~GNiCRSpmAE~l~r~~~----~~~g~-~~~v~SAGt~~~~ 77 (180)
T 4egs_A 34 SMRVLFVCTGNTCRSPMAEGIFNAKS----KALGK-DWEAKSAGVFAPE 77 (180)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHH----HHTTC-CCEEEEEETTCCT
T ss_pred CeEEEEEeCCCcccCHHHHHHHHHHH----HhcCC-ceEEEEeeecCcC
Confidence 35699999877767877764444333 34664 5677777777663
No 123
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=55.31 E-value=15 Score=26.55 Aligned_cols=33 Identities=12% Similarity=0.302 Sum_probs=20.1
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
.+|+|+|+.|+ .+-.+ ..+++.|.. .|| +|.++
T Consensus 133 ~~vlVlcG~GN-NGGDG-lv~AR~L~~----~G~-~V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHV-KGAQG-ISCGRHLAN----HDV-QVILF 165 (306)
T ss_dssp CEEEEEECSSH-HHHHH-HHHHHHHHH----TTC-EEEEE
T ss_pred CeEEEEECCCC-CHHHH-HHHHHHHHH----CCC-cEEEE
Confidence 58999999887 33322 133345544 899 56544
No 124
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=55.22 E-value=38 Score=21.59 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 53 ~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
+..+.... ...++++||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 22 L~~ll~~~-~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKS-----VQRCIALAQLLVE----QNF-PAIAIHRGMP 66 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHhC-CCCcEEEEECC-----HHHHHHHHHHHHh----cCC-CEEEEECCCC
Confidence 33444333 34678999964 3334455555544 788 6788888864
No 125
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=54.83 E-value=57 Score=23.53 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=30.4
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+......+.++++||++ ...+..++..|.+ .|+ ++..+.|++.
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~-----~~~~~~l~~~L~~----~~~-~~~~~h~~~~ 311 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVET-----KKGADSLEDFLYH----EGY-ACTSIHGDRS 311 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHHhcCCCCeEEEEECC-----HHHHHHHHHHHHH----CCC-CeeEecCCCC
Confidence 444555544567789999964 3334455555544 888 7888888864
No 126
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=54.40 E-value=16 Score=25.92 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=20.3
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
.+|+|+|..|+ ++-.+ ..+++.|.. .|| +|.++
T Consensus 80 ~~VlVlcG~GN-NGGDG-lv~AR~L~~----~G~-~V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGN-NGGDG-LVCARHLKL----FGY-QPTIY 112 (265)
T ss_dssp CEEEEEECSSH-HHHHH-HHHHHHHHH----TTC-EEEEE
T ss_pred CeEEEEECCCC-CHHHH-HHHHHHHHH----CCC-cEEEE
Confidence 58999999887 33322 233445544 899 56544
No 127
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=54.28 E-value=56 Score=23.24 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+..... ..++++||++ ...+..++..| ...|+ .+..+.|++.
T Consensus 18 ~L~~ll~~~~-~~~~LVF~~t-----~~~~~~l~~~L----~~~g~-~~~~lhg~l~ 63 (300)
T 3i32_A 18 VLSDLLYVAS-PDRAMVFTRT-----KAETEEIAQGL----LRLGH-PAQALHGDMS 63 (300)
T ss_dssp HHHHHHHHHC-CSSEEEECSS-----HHHHHHHHHHH----HTTTC-CEEEECSCCC
T ss_pred HHHHHHHhcC-CCCEEEEECC-----HHHHHHHHHHH----HhCCC-CEEEEeCCCC
Confidence 3444443333 5789999964 33344445555 44888 6788888854
No 128
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=53.84 E-value=38 Score=21.24 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
...++++||++ ...+..++..|. ..|+ .+..+.|++.
T Consensus 34 ~~~~~lVF~~~-----~~~~~~l~~~L~----~~~~-~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRT-----KEHVNQLTDELD----DLGY-PCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSS-----HHHHHHHHHHHH----HTTC-CEEEECTTSC
T ss_pred CCCcEEEEECC-----HHHHHHHHHHHH----HcCC-cEEEEeCCCC
Confidence 34578999964 233444555554 4888 6888888864
No 129
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=53.66 E-value=46 Score=22.06 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+... ....+++|||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 21 ~l~~ll~~-~~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~lhg~~~ 66 (212)
T 3eaq_A 21 VLSDLLYV-ASPDRAMVFTRT-----KAETEEIAQGLLR----LGH-PAQALHGDLS 66 (212)
T ss_dssp HHHHHHHH-HCCSCEEEECSS-----HHHHHHHHHHHHH----HTC-CEEEECSSSC
T ss_pred HHHHHHHh-CCCCeEEEEeCC-----HHHHHHHHHHHHH----cCC-CEEEEECCCC
Confidence 34444333 245689999964 3334445555544 788 6788898864
No 130
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=53.34 E-value=44 Score=21.81 Aligned_cols=36 Identities=11% Similarity=0.204 Sum_probs=23.7
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
..++++||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 54 ~~~~lVF~~~-----~~~~~~l~~~L~~----~g~-~~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEK-----KADVDAIHEYLLL----KGV-EAVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSC-----HHHHHHHHHHHHH----HTC-CEEEECTTSC
T ss_pred CCCEEEEECC-----HHHHHHHHHHHHH----cCC-cEEEEeCCCC
Confidence 4578999964 3334455555544 787 6778888864
No 131
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=52.91 E-value=14 Score=24.33 Aligned_cols=52 Identities=10% Similarity=0.144 Sum_probs=31.0
Q ss_pred HHHHHHhcCCCeEEEEeCCCCC-CcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhh
Q 032540 54 FDLIQEVRGKDTLVFHCALSQV-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (138)
Q Consensus 54 ~~~~~~~~~~~~iv~~c~~g~~-~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w 110 (138)
..+.+.++++..+|+.|..|.. .|...+ ..|.. +...|..++.++.||-.++
T Consensus 61 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA----~~l~~-~~~~G~~~i~FvIGGa~Gl 113 (167)
T 1to0_A 61 DRILSKISPDAHVIALAIEGKMKTSEELA----DTIDK-LATYGKSKVTFVIGGSLGL 113 (167)
T ss_dssp HHHHTTSCTTSEEEEEEEEEEECCHHHHH----HHHHH-HHTTTCCEEEEEECCSSCC
T ss_pred HHHHhhcCCCCEEEEEcCCCCcCCHHHHH----HHHHH-HHhcCCceEEEEEECCCCC
Confidence 3344445555558888887763 333333 33332 2346877898899987655
No 132
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=50.95 E-value=25 Score=23.03 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=44.7
Q ss_pred HHHhhhCC-CCeEEEEecCCCccCCCccccceecCCcch-hHHHHHHHHHhcCCCeEEEEeCCCCC-CcHHHHHHHHHHH
Q 032540 12 QLLSLKRR-PNIAVIDVRDDERSYDGHITGSLHYPSDSF-TDKIFDLIQEVRGKDTLVFHCALSQV-RGPTCAKRLANYL 88 (138)
Q Consensus 12 ~~~~~l~~-~~~~liDvR~~~e~~~ghipgAi~ip~~~l-~~~~~~~~~~~~~~~~iv~~c~~g~~-~~~~~~~~~~~~L 88 (138)
++.+.+.. -++-++.+.+... -+.... ...-..+.+.++++..+|+.|..|.. .|...+.++..+
T Consensus 23 eY~kRl~~~~~lei~ev~~~k~-----------~~~~~~~~~E~~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~- 90 (163)
T 1o6d_A 23 HYEKFLRRFCKPEVLEIKRVHR-----------GSIEEIVRKETEDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDL- 90 (163)
T ss_dssp HHHHHHTTTCEEEEEEECCCCC-----------SCHHHHHHHHHHHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHH-
T ss_pred HHHHHcCccCCceEEEecCccc-----------ccHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH-
Confidence 44444443 2456777776554 011111 22333344445555558888887763 333344333322
Q ss_pred HHhhhhCCCccEEEeccchhhhhh
Q 032540 89 DEVKEDTGINSIFVLERGFKGWEA 112 (138)
Q Consensus 89 ~~~l~~~G~~~v~~l~gG~~~w~~ 112 (138)
...| .++.++.||-.++..
T Consensus 91 ----~~~G-~~i~FvIGGa~Gl~~ 109 (163)
T 1o6d_A 91 ----EMKG-KDITILIGGPYGLNE 109 (163)
T ss_dssp ----HHHT-CCEEEEECCTTCCCG
T ss_pred ----HhcC-CeEEEEEECCCCCCH
Confidence 2357 789889999766543
No 133
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=49.08 E-value=14 Score=26.92 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=16.8
Q ss_pred HHHHHhcCCCeEEEEeCCCCCCcH
Q 032540 55 DLIQEVRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 55 ~~~~~~~~~~~iv~~c~~g~~~~~ 78 (138)
.+.+.++.+.+|+|+|..|..|..
T Consensus 205 ~~v~~l~~~~~i~vHC~aG~GRTg 228 (314)
T 3mmj_A 205 AFYRTLPQDAWLHFHSEAGVGRTT 228 (314)
T ss_dssp HHHHTCCTTCEEEEECSSSSHHHH
T ss_pred HHHHHcCCCCCEEEECCCCCchHH
Confidence 334445677899999999874443
No 134
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=47.44 E-value=83 Score=23.24 Aligned_cols=65 Identities=11% Similarity=0.206 Sum_probs=34.5
Q ss_pred HHHHhhhC---CCCeEEEEecCCCccCCCccccce-ecCCc-----ch---hH---HHHHHHHHhcCCCeEEEEeCCCCC
Q 032540 11 SQLLSLKR---RPNIAVIDVRDDERSYDGHITGSL-HYPSD-----SF---TD---KIFDLIQEVRGKDTLVFHCALSQV 75 (138)
Q Consensus 11 ~~~~~~l~---~~~~~liDvR~~~e~~~ghipgAi-~ip~~-----~l---~~---~~~~~~~~~~~~~~iv~~c~~g~~ 75 (138)
+++...++ .+.+.|++++. ..|......+.+ ++|+. .+ .. .+..+... ..+..++|+|..|..
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD~~~P~l~~l~~~~~~i~~~l~~-~~~~~v~VHC~aG~G 127 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQ-NPKNVCVVHCLDGRA 127 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGGEEECCCCSSSCCCHHHHHHHHHHHHHHHHH-CTTCEEEEEECSCTH
T ss_pred HHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCcEEEeecCCCCCCCHHHHHHHHHHHHHHHhc-CCCCeEEEEeCCCCc
Confidence 34444443 45799999964 456544443322 33322 12 11 22222221 355789999998875
Q ss_pred Cc
Q 032540 76 RG 77 (138)
Q Consensus 76 ~~ 77 (138)
|+
T Consensus 128 Rt 129 (361)
T 3n0a_A 128 AS 129 (361)
T ss_dssp HH
T ss_pred cH
Confidence 43
No 135
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=46.29 E-value=40 Score=21.81 Aligned_cols=51 Identities=16% Similarity=0.195 Sum_probs=30.5
Q ss_pred HHHHHHhcCCCeEEEEeCCCCC-CcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 54 FDLIQEVRGKDTLVFHCALSQV-RGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 54 ~~~~~~~~~~~~iv~~c~~g~~-~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
..+.+.++++ .+|+.|..|.. .|...+.++..+ ...| .++.++.||-.++.
T Consensus 58 ~~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~-----~~~g-~~i~FvIGG~~Gl~ 109 (155)
T 1ns5_A 58 EQMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERW-----KLDG-RDVSLLIGGPEGLS 109 (155)
T ss_dssp HHHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHH-----HHHC-SCEEEEECBTTBCC
T ss_pred HHHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHH-----HhcC-CeEEEEEECCCCCC
Confidence 3444455665 68888887763 333344333322 2358 78988999976653
No 136
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=46.11 E-value=38 Score=23.35 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=35.7
Q ss_pred cCHHHHHhhhC---CCCeEEEEecCCCc-cCCCccc--c--ceecCCcch-----hHHHHHHHHHhc------CCCeEEE
Q 032540 8 ISGSQLLSLKR---RPNIAVIDVRDDER-SYDGHIT--G--SLHYPSDSF-----TDKIFDLIQEVR------GKDTLVF 68 (138)
Q Consensus 8 i~~~~~~~~l~---~~~~~liDvR~~~e-~~~ghip--g--Ai~ip~~~l-----~~~~~~~~~~~~------~~~~iv~ 68 (138)
.+++++.+.++ .+-..|||++.... |....+. | -+++|+.+. ...+..+.+.+. .+.+|+|
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi~y~~~p~~D~~~~P~~~~l~~~~~~i~~~~~~~~~~~VlV 146 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGV 146 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTCEEEECCCCCTTCCCCHHHHHHHHHHHTTC-----CEEEEE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCCEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45777766554 23357999997532 3221111 1 134443210 112222222221 2478999
Q ss_pred EeCCCCCCcH
Q 032540 69 HCALSQVRGP 78 (138)
Q Consensus 69 ~c~~g~~~~~ 78 (138)
+|..|..|+.
T Consensus 147 HC~aG~gRTG 156 (241)
T 2c46_A 147 HCTHGFNRTG 156 (241)
T ss_dssp ECSSSSHHHH
T ss_pred ECCCCCCHHH
Confidence 9999975543
No 137
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=44.32 E-value=57 Score=20.42 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+.+.. ...++++||++ ...+..++..|.. .|+ .+..+.|++.
T Consensus 20 ~l~~ll~~~-~~~~~lVF~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 65 (165)
T 1fuk_A 20 CLTDLYDSI-SVTQAVIFCNT-----RRKVEELTTKLRN----DKF-TVSAIYSDLP 65 (165)
T ss_dssp HHHHHHHHT-TCSCEEEEESS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred HHHHHHHhC-CCCCEEEEECC-----HHHHHHHHHHHHH----cCC-CEEEEECCCC
Confidence 344444443 34678999964 2334445555544 787 6788888864
No 138
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=43.29 E-value=44 Score=19.10 Aligned_cols=55 Identities=11% Similarity=0.148 Sum_probs=31.4
Q ss_pred ecCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 43 HYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 43 ~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
.++.+.|...+..+... .++.+|++.++..- .-.... .+... ++..|+.+|.+..
T Consensus 38 ~v~~~~L~~~l~~~~~~-~~~~~V~I~aD~~~-~y~~vv-~vmd~----l~~aG~~~v~l~t 92 (99)
T 2pfu_A 38 PVTDETMITALNALTEG-KKDTTIFFRADKTV-DYETLM-KVMDT----LHQAGYLKIGLVG 92 (99)
T ss_dssp EECSSSHHHHHHHHSSS-CCSSCEEEEECTTC-CHHHHH-HHHHH----HHHTCCCCEECTT
T ss_pred ecCHHHHHHHHHHHHhc-CCCceEEEEcCCCC-CHHHHH-HHHHH----HHHcCCCeEEEEe
Confidence 35666776666655322 34567888887654 322222 22223 4569999887543
No 139
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=43.25 E-value=31 Score=20.75 Aligned_cols=38 Identities=18% Similarity=0.171 Sum_probs=22.9
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
.+...|++.|..|. ++...+ ..+++..++.|+ ++.+..
T Consensus 4 ~~~mkIlL~C~aGm-STsllv----~km~~~a~~~gi-~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSG-TSAQLA----NAINEGANLTEV-RVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSS-HHHHHH----HHHHHHHHHHTC-SEEEEE
T ss_pred ccCceEEEECCCCC-CHHHHH----HHHHHHHHHCCC-ceEEEE
Confidence 34567999999987 443333 455555556787 455433
No 140
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=39.66 E-value=65 Score=19.82 Aligned_cols=25 Identities=8% Similarity=0.187 Sum_probs=16.4
Q ss_pred chhHHHHHHHHHhcCCCeEEEEeCC
Q 032540 48 SFTDKIFDLIQEVRGKDTLVFHCAL 72 (138)
Q Consensus 48 ~l~~~~~~~~~~~~~~~~iv~~c~~ 72 (138)
++...+.+..+.++.++.++++|+-
T Consensus 43 ~~~~~i~~~i~~~~~~~gvliLtDl 67 (135)
T 1pdo_A 43 TLIEKYNAQLAKLDTTKGVLFLVDT 67 (135)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 3445555655555666778888886
No 141
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=38.67 E-value=20 Score=22.43 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=13.1
Q ss_pred HHHHhhhCCCCeEEEEecCCCc
Q 032540 11 SQLLSLKRRPNIAVIDVRDDER 32 (138)
Q Consensus 11 ~~~~~~l~~~~~~liDvR~~~e 32 (138)
+++..+.+.+=..|||+|+..|
T Consensus 19 ~d~~~L~~~gi~~Vi~l~~~~e 40 (161)
T 2i6j_A 19 NEILEWRKEGVKRVLVLPEDWE 40 (161)
T ss_dssp HHHHHHHHHTCCEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEEcCchhh
Confidence 4444443333357999998754
No 142
>1pp7_U 39 kDa initiator binding protein; core promoter, transcription initation, IBP39, T. vaginalis, transcription/DNA complex; 2.45A {Trichomonas vaginalis} SCOP: a.4.5.44 PDB: 1pp8_U
Probab=38.18 E-value=7.6 Score=24.24 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=22.7
Q ss_pred hhhhCCCccEEEeccchhhhhhCCCCcc
Q 032540 91 VKEDTGINSIFVLERGFKGWEASGKPVC 118 (138)
Q Consensus 91 ~l~~~G~~~v~~l~gG~~~w~~~g~p~~ 118 (138)
-|+.+||.+..-=.+|+..|+..|+.-.
T Consensus 86 NLRdL~F~Q~q~dk~g~T~W~~~gFtk~ 113 (131)
T 1pp7_U 86 NLRDLAFEQLQHDKGGWTQWKRSGFTRN 113 (131)
T ss_dssp HHHHTTCEEEEEEETTEEEEECTTEETT
T ss_pred cchhccceeeccccCceeEEecCCcccc
Confidence 4577999988877899999999987543
No 143
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=37.78 E-value=65 Score=21.34 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=24.4
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
..+|++.|-.|. ........++..|+ ..|| +|.+|.
T Consensus 88 ~~~vll~~~~gd-~H~iG~~~va~~l~----~~G~-~v~~LG 123 (210)
T 1y80_A 88 VGKIVLGTVKGD-LHDIGKNLVAMMLE----SGGF-TVYNLG 123 (210)
T ss_dssp CCEEEEEEBTTC-CCCHHHHHHHHHHH----HTTC-EEEECC
T ss_pred CCEEEEEeCCCc-ccHHHHHHHHHHHH----HCCC-EEEECC
Confidence 457999998877 55555555665554 4999 666654
No 144
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=37.75 E-value=1e+02 Score=21.39 Aligned_cols=63 Identities=16% Similarity=0.131 Sum_probs=37.2
Q ss_pred CCC-CccccCHHHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCC
Q 032540 1 MAR-SISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (138)
Q Consensus 1 ~a~-~~~~i~~~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~ 74 (138)
|+. ....++.+++.+++..-+.+++|+-..- +... .-+| ...+.+..+. ..+.++++..+.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~k~i~~D~DGTL-~~~~-----~~~~--~~~~~l~~l~---~~g~~~~~~Tn~~~ 64 (306)
T 2oyc_A 1 MSLARCERLRGAALRDVLGRAQGVLFDCDGVL-WNGE-----RAVP--GAPELLERLA---RAGKAALFVSNNSR 64 (306)
T ss_dssp -CCCCCEECCHHHHHHHHHHCSEEEECSBTTT-EETT-----EECT--THHHHHHHHH---HTTCEEEEEECCCS
T ss_pred CcchhhhcCCHHHHHHHHhhCCEEEECCCCcE-ecCC-----ccCc--CHHHHHHHHH---HCCCeEEEEECCCC
Confidence 566 7778999999988876678999985432 1111 1122 2233344443 35677777776544
No 145
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=36.85 E-value=36 Score=21.26 Aligned_cols=56 Identities=7% Similarity=0.142 Sum_probs=29.6
Q ss_pred HHHHHHHHhc-CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 52 KIFDLIQEVR-GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 52 ~~~~~~~~~~-~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
.+..+++.+. ....++.+|.+|.+....+.. .+++.++..++..-..+++.+..|.
T Consensus 94 ~~~~fl~~~~~~~~k~~~~~t~gg~~~g~~~~----~l~~~~~~~~~~~g~~~~~~~~~w~ 150 (151)
T 3edo_A 94 PIKTLLDQMKNYRGEVASFFTSAGTNHKAYVS----HFNEWADGLNVIGVARDDSEVDKWS 150 (151)
T ss_dssp HHHHHHHHTTTCCSEEEEEEECSSCCHHHHHH----HHHHHTTTSEEEEEEETTTTHHHHH
T ss_pred HHHHHHHhchhcCCEEEEEEEeCCCCCCcHHH----HHHHHcCCCeeecccccHHHHHHHh
Confidence 3444444432 334566667666633234443 3333344566655566677777774
No 146
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=36.73 E-value=70 Score=22.43 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=13.8
Q ss_pred hcCCCeEEEEeCCCCCCc
Q 032540 60 VRGKDTLVFHCALSQVRG 77 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~ 77 (138)
.+...||||+|..|..|+
T Consensus 203 ~~~~~PivVHCsaGvGRT 220 (288)
T 4grz_A 203 LPHAGPIIVHSSAGIGRT 220 (288)
T ss_dssp STTCCCEEEECSSSSHHH
T ss_pred cCCCCcEEEEeCCCCcHH
Confidence 355789999999887444
No 147
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=35.83 E-value=81 Score=21.80 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=23.8
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
..+|++.|-.|. ........++..|+ ..|| +|.+|
T Consensus 123 ~~~vlla~~~gd-~HdiG~~iva~~L~----~~G~-~Vi~L 157 (258)
T 2i2x_B 123 KGTVVCHVAEGD-VHDIGKNIVTALLR----ANGY-NVVDL 157 (258)
T ss_dssp SCEEEEEECTTC-CCCHHHHHHHHHHH----HTTC-EEEEE
T ss_pred CCeEEEEeCCCC-ccHHHHHHHHHHHH----HCCC-EEEEC
Confidence 467999998877 45555555565554 4999 56555
No 148
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=35.05 E-value=51 Score=23.15 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.3
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 202 ~~~~pivVHCsaGvGRT 218 (284)
T 1fpr_A 202 PHAGPIIVHSSAGIGRT 218 (284)
T ss_dssp TTCCCEEEESSBSSHHH
T ss_pred CCCCcEEEEcCCCCcHH
Confidence 45689999999887454
No 149
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=33.71 E-value=42 Score=25.48 Aligned_cols=50 Identities=10% Similarity=0.081 Sum_probs=27.3
Q ss_pred CCCeEEEEeCCCCCC-cHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh
Q 032540 62 GKDTLVFHCALSQVR-GPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA 112 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~-~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~ 112 (138)
.+.++.+||+-.... +......+.-.....|++.|+ +++++-||+.++..
T Consensus 34 ~~~~~~vy~G~dPTg~sLHlGh~v~l~~l~~lQ~~G~-~~i~lIgD~ta~ig 84 (432)
T 1h3f_A 34 EGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGH-KVVLIIGDFTGMIG 84 (432)
T ss_dssp TCSCCEEEEEECTTCCSCBHHHHHHHHHHHHHHHTTC-EEEEEECCCC----
T ss_pred cCCCcEEEEcccCCCCCCchhhHHHHHHHHHHHHCCC-CEEEEEccceEEec
Confidence 467888999654432 233333332111224677898 68888888888753
No 150
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=33.26 E-value=81 Score=22.61 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=13.4
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 237 ~~~~PivVHCsaGvGRT 253 (316)
T 3b7o_A 237 MDAGPVVVHCSAGIGRT 253 (316)
T ss_dssp TTCCCEEEEESSSSHHH
T ss_pred CCCCCEEEEcCCCCcHH
Confidence 46789999999887554
No 151
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=33.09 E-value=1.4e+02 Score=23.80 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=25.6
Q ss_pred hcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccch
Q 032540 60 VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF 107 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~ 107 (138)
...+..++|+|.+ ...+..++..|.+ .|+ ++..+.|++
T Consensus 436 ~~~~~~vlVf~~t-----~~~ae~L~~~L~~----~gi-~~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLT-----VRMAEELTSFLVE----HGI-RARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTC
T ss_pred HhcCCEEEEEECC-----HHHHHHHHHHHHh----cCC-CceeecCCC
Confidence 3467789999964 3345555556644 898 677788875
No 152
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=33.06 E-value=24 Score=24.97 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=17.0
Q ss_pred hHHHHHHHHHhcCCCeEEEEeCCCCCCc
Q 032540 50 TDKIFDLIQEVRGKDTLVFHCALSQVRG 77 (138)
Q Consensus 50 ~~~~~~~~~~~~~~~~iv~~c~~g~~~~ 77 (138)
...+..+......+.||||+|..|..|+
T Consensus 196 l~~i~~v~~~~~~~~PivVHCsaGvGRT 223 (287)
T 2b49_A 196 LEFVNYVRSLRVDSEPVLVHCSAGIGRT 223 (287)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSSSSHHH
T ss_pred HHHHHHHHHhccCCCcEEEEcCCCCcHH
Confidence 3334433332234689999999887554
No 153
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=32.84 E-value=1.5e+02 Score=23.51 Aligned_cols=44 Identities=16% Similarity=0.316 Sum_probs=27.8
Q ss_pred HHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccch
Q 032540 54 FDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGF 107 (138)
Q Consensus 54 ~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~ 107 (138)
..+......+..++|+|.+ ...+..++..|.+ .|+ ++..+.|++
T Consensus 436 ~~l~~~~~~~~~vlVf~~t-----~~~ae~L~~~L~~----~gi-~~~~lh~~~ 479 (661)
T 2d7d_A 436 GEIQARIERNERVLVTTLT-----KKMSEDLTDYLKE----IGI-KVNYLHSEI 479 (661)
T ss_dssp HHHHHHHTTTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTC
T ss_pred HHHHHHHhcCCeEEEEECC-----HHHHHHHHHHHHh----cCC-CeEEEeCCC
Confidence 3333334566789999964 3345455556644 888 677788875
No 154
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A
Probab=32.72 E-value=61 Score=24.67 Aligned_cols=55 Identities=4% Similarity=0.004 Sum_probs=32.0
Q ss_pred HHhcCCCeEEEEeCCCCCC-cHHHHHHHHHHHHHhhhh-CCCccEEEeccchhhhhhC
Q 032540 58 QEVRGKDTLVFHCALSQVR-GPTCAKRLANYLDEVKED-TGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 58 ~~~~~~~~iv~~c~~g~~~-~~~~~~~~~~~L~~~l~~-~G~~~v~~l~gG~~~w~~~ 113 (138)
+.+..++++.+||+-...+ +......+...+.+.|++ .|+ +++++-||+.++...
T Consensus 101 ~~l~~~~~~~vy~G~dPTag~LHLGh~v~~~~~~~lQ~~~G~-~~iilIgD~ta~igd 157 (437)
T 1r6u_A 101 DAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNV-PLVIQMTDDEKYLWK 157 (437)
T ss_dssp HHHTTTCCEEEEEEECCCSSCCBHHHHHHHHHHHHHHHHHTC-CEEEEECHHHHHHHS
T ss_pred HHHhcCCCcEEEEcccCCCCCccHHHHHHHHHHHHHHHHhCC-cEEEEEecceeeecC
Confidence 3345567899999765531 223333333222223555 787 678888888877654
No 155
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=32.61 E-value=12 Score=23.72 Aligned_cols=39 Identities=18% Similarity=0.493 Sum_probs=25.4
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w 110 (138)
..|+|+|.+..-||+.|...+...+ + .++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~-------~-~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMV-------G-DKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHH-------S-SCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-------C-CCEEEEeeecCCc
Confidence 4699999887778888764444333 1 1244566677776
No 156
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=32.60 E-value=65 Score=20.57 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=22.5
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
...+|++.|-.|. ........++..|+ ..|| +|.++
T Consensus 17 ~~~~vlla~~~gd-~HdiG~~~va~~l~----~~G~-eVi~l 52 (161)
T 2yxb_A 17 RRYKVLVAKMGLD-GHDRGAKVVARALR----DAGF-EVVYT 52 (161)
T ss_dssp CSCEEEEEEESSS-SCCHHHHHHHHHHH----HTTC-EEECC
T ss_pred CCCEEEEEeCCCC-ccHHHHHHHHHHHH----HCCC-EEEEC
Confidence 4467888887665 44455555555554 4899 56554
No 157
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=32.59 E-value=90 Score=21.15 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=16.6
Q ss_pred CeEEEEeCCCCCCcH---HHHHHHHHHHHHhhhhCCC
Q 032540 64 DTLVFHCALSQVRGP---TCAKRLANYLDEVKEDTGI 97 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~---~~~~~~~~~L~~~l~~~G~ 97 (138)
+.|-|||.+...... ..++.+...| .+.|+
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~L----A~~G~ 46 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNEL----VSRNI 46 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHH----HHTTC
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHH----HHCCC
Confidence 458888877653322 2344444444 44776
No 158
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=32.34 E-value=29 Score=26.51 Aligned_cols=51 Identities=10% Similarity=0.081 Sum_probs=27.4
Q ss_pred hcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 60 VRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
.+.+-.-|+||++|. -+..+|-++++.........+-..+..+.|||.++.
T Consensus 124 ~p~~~~~v~f~~sGs-EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t 174 (473)
T 4e3q_A 124 SPFDSGRVFYTNSGS-EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVT 174 (473)
T ss_dssp SSCSSCEEEEESSHH-HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSS
T ss_pred CCCCccEEEEeCchH-HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCc
Confidence 354555688998876 343444444433221111123345777888887763
No 159
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=31.92 E-value=1.4e+02 Score=21.34 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=12.5
Q ss_pred CCCeEEEEeCCCCCCc
Q 032540 62 GKDTLVFHCALSQVRG 77 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~ 77 (138)
.+.+|+|+|..|..|+
T Consensus 110 ~~~~VlVHC~aG~gRT 125 (324)
T 1d5r_A 110 DNHVAAIHCKAGKGRT 125 (324)
T ss_dssp SCSEEEEECSSSSHHH
T ss_pred CCCeEEEECCCCCChh
Confidence 4579999999987554
No 160
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=31.89 E-value=1e+02 Score=20.64 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=16.6
Q ss_pred CeEEEEeCCCCCCcH---HHHHHHHHHHHHhhhhCCC
Q 032540 64 DTLVFHCALSQVRGP---TCAKRLANYLDEVKEDTGI 97 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~---~~~~~~~~~L~~~l~~~G~ 97 (138)
..|-|||.+.. ... ..++.+...| .+.|+
T Consensus 23 ~~v~Vfggs~~-~~~~~~~~A~~lg~~L----a~~g~ 54 (199)
T 3qua_A 23 WAVCVYCASGP-THPELLELAAEVGSSI----AARGW 54 (199)
T ss_dssp CEEEEECCSSC-CCHHHHHHHHHHHHHH----HHTTC
T ss_pred CEEEEEECCCC-CCHHHHHHHHHHHHHH----HHCCC
Confidence 67889997652 332 3344444444 44887
No 161
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=30.81 E-value=86 Score=24.09 Aligned_cols=35 Identities=9% Similarity=-0.036 Sum_probs=20.7
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCc
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGIN 98 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~ 98 (138)
....+++||++.. .... ....+..|.+.|.+.|+.
T Consensus 145 r~~~IvV~cGSs~-~~p~-yye~A~eLGr~LA~~G~~ 179 (462)
T 3gh1_A 145 ATPNLVVCWGGHS-INEV-EYQYTREVGHELGLRELN 179 (462)
T ss_dssp CCSCEEEEECCSS-CCHH-HHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCCC-CCHH-HHHHHHHHHHHHHHCCCE
Confidence 4578999998865 2332 223344454455568883
No 162
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=29.84 E-value=87 Score=24.01 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+.++||||++ ...+..++..|.+ .|+ .+..+.||+.
T Consensus 235 ~~~~~IVf~~s-----r~~~e~l~~~L~~----~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNS-----RAKVEDTAARLQS----KGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred CCCcEEEEeCC-----HHHHHHHHHHHHH----CCC-CEEEecCCCC
Confidence 45678999964 3345555566644 888 6888899875
No 163
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=29.75 E-value=29 Score=24.60 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=13.2
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 216 ~~~~PivVHCsaGvGRT 232 (291)
T 2hc1_A 216 PGAGPTVVHCSAGVGRT 232 (291)
T ss_dssp SCCCCEEEECSSSSHHH
T ss_pred CCCCCEEEEeCCCCchh
Confidence 45679999999887544
No 164
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=29.52 E-value=1.1e+02 Score=19.48 Aligned_cols=65 Identities=17% Similarity=0.304 Sum_probs=41.1
Q ss_pred HHHHHHHhcCCCeEEEEeCC---CCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccc-hhhhh--hCCCCccc
Q 032540 53 IFDLIQEVRGKDTLVFHCAL---SQVRGPTCAKRLANYLDEVKEDTGINSIFVLERG-FKGWE--ASGKPVCR 119 (138)
Q Consensus 53 ~~~~~~~~~~~~~iv~~c~~---g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG-~~~w~--~~g~p~~~ 119 (138)
+.++..++ +.+.||+|--. ..-+++..|..+...+...|+..|| +|+---=| +.+|. ..|.|+..
T Consensus 64 I~~~a~kv-~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~~~g~-eV~raPFGwyK~F~i~ckGHPLsE 134 (143)
T 2hl0_A 64 ISKVAEQV-KAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKERGF-NVGKAPFGYYKAFKISCKGHPLAE 134 (143)
T ss_dssp HHHHHHHH-TCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHHTTC-EEEECCSSEEEEEEEEECCCTTSE
T ss_pred HHHHHHhc-CCCEEEEeccccccCccCChHHHHHHHHHHHHHHHhCCC-eEEEeCCccceeEEEEecCccHHH
Confidence 33444443 45789999852 3345666666666677778888999 77766555 45663 35777655
No 165
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=29.30 E-value=1.2e+02 Score=22.09 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEecc
Q 032540 53 IFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLER 105 (138)
Q Consensus 53 ~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~g 105 (138)
..++.+.++..+-+++.|.-|+..+..++--++..++ +.|+.-+.+..+
T Consensus 71 ~~eI~~~l~~aD~VFVtaGLGGGTGTGaAPVvAeiak----e~GalvVavVt~ 119 (315)
T 3r4v_A 71 IPALMDTIPEADFYIVCYSLGGGSGSVLGPLITGQLA----DRKASFVSFVVG 119 (315)
T ss_dssp HHHHHHTSCCBSCEEEEEESSSSSHHHHHHHHHHHHH----HTTCCEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEeccCCccccchHHHHHHHHH----HcCCCEEEEEec
Confidence 3455555666677777777777677778766666664 499976655544
No 166
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=28.91 E-value=1.1e+02 Score=19.17 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=19.5
Q ss_pred CCeEEEEeCC-----CCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 63 KDTLVFHCAL-----SQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 63 ~~~iv~~c~~-----g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
..++||++.+ +. ........++..|. +.|| +|..++
T Consensus 30 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~~l~----~~g~-~v~~~d 70 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGT-MNNKVVTTLAKALD----ELGL-KTVRFN 70 (208)
T ss_dssp CSEEEEEECSCGGGTCC-TTCHHHHHHHHHHH----HTTC-EEEEEC
T ss_pred CCCEEEEEcCCCCCCCc-cCCchHHHHHHHHH----HCCC-EEEEEe
Confidence 4678888876 33 22223334444443 3788 565554
No 167
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=28.60 E-value=75 Score=22.63 Aligned_cols=106 Identities=14% Similarity=0.133 Sum_probs=51.4
Q ss_pred cccCHHHHHhhhCCCCeEEE-EecCCCccCCCcc-ccceecCCcc--hhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHH
Q 032540 6 SYISGSQLLSLKRRPNIAVI-DVRDDERSYDGHI-TGSLHYPSDS--FTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCA 81 (138)
Q Consensus 6 ~~i~~~~~~~~l~~~~~~li-DvR~~~e~~~ghi-pgAi~ip~~~--l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~ 81 (138)
..||...+..+ +.-++++. |.|....... |+ ++..-+++.. .......+.+.+..++.|++.++.|.-.-..-.
T Consensus 29 ~~lT~rA~~~L-~~aDvI~~edtr~~~~lL~-~~~~~~~~i~~~~~~~~~~~~~li~~l~~G~~Va~lsdaGdP~i~~~g 106 (296)
T 3kwp_A 29 DDMTFRAVKTL-TAVDLIAAEDTRNTQKLLN-HFEITTKQISFHEHNTQERIPQLIAKLKQGMQIAQVSDAGMPSISDPG 106 (296)
T ss_dssp GGCCHHHHHHH-HHSSEEEESCHHHHHHHHH-HTTCCCEEEECSTTTHHHHHHHHHHHHHTTCEEEEECSSBCTTSSHHH
T ss_pred cchhhHHHHHH-hHhhhhhhhccccHHHHhh-heeeeeeeeehhhcchhhHhHHHHHHHhcCceEEEeccCCCCCCCCCc
Confidence 34565554443 33467888 6553222111 11 1221222222 233445555555678889888755542211222
Q ss_pred HHHHHHHHHhhhhCCCccEEEeccc---hhhhhhCCCCcc
Q 032540 82 KRLANYLDEVKEDTGINSIFVLERG---FKGWEASGKPVC 118 (138)
Q Consensus 82 ~~~~~~L~~~l~~~G~~~v~~l~gG---~~~w~~~g~p~~ 118 (138)
..+...+ .+.|+ .|.++-|= ..+....|.|+.
T Consensus 107 ~~lv~~~----~~~gi-~v~viPGiSA~~aA~a~~Glp~~ 141 (296)
T 3kwp_A 107 HELVNAC----IDAHI-PVVPLPGANAGLTALIASGLAPQ 141 (296)
T ss_dssp HHHHHHH----HHTTC-CEEECCCCCHHHHHHHHHSSCCS
T ss_pred hHHHHHH----HHcCC-CeeeCCCcccchHHHHhccCCCC
Confidence 2333334 44787 67777753 234455677764
No 168
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=28.31 E-value=98 Score=23.48 Aligned_cols=43 Identities=19% Similarity=0.092 Sum_probs=26.6
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEA 112 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~ 112 (138)
.-.-|++|++|. -+..++-+++. ..-|-+++..++|+|.+|..
T Consensus 142 ~~~~v~f~~SGs-EA~e~AiklAr------~~tgr~~ii~~~~~yHG~t~ 184 (454)
T 4ao9_A 142 QIEQLRFTNSGT-EANLMALTAAL------HFTGRRKIVVFSGGYHGGVL 184 (454)
T ss_dssp TCSEEEEESSHH-HHHHHHHHHHH------HHHTCCEEEEETTCBCSTTC
T ss_pred CCCEEEEeCchH-HHHHHHHHHHH------hcccCCeEEEEeCCcCCccc
Confidence 445678898775 33333333332 23466688889999998754
No 169
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=27.47 E-value=64 Score=20.33 Aligned_cols=19 Identities=21% Similarity=0.496 Sum_probs=14.6
Q ss_pred CeEEEEeCCCCCCcHHHHH
Q 032540 64 DTLVFHCALSQVRGPTCAK 82 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~ 82 (138)
..|+|+|....-||+.|..
T Consensus 9 ~~VLFVC~gN~cRSpmAEa 27 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGER 27 (150)
T ss_dssp CEEEEEESSSSSHHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHH
Confidence 4799999877777777753
No 170
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=27.30 E-value=64 Score=21.38 Aligned_cols=49 Identities=16% Similarity=0.100 Sum_probs=27.6
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCcccc
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRC 120 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~~ 120 (138)
..+++++|..+|. ++.++..|. ..||.-+-+++.....+.-.|+|+...
T Consensus 11 ~~k~v~IiGAGg~------g~~v~~~l~----~~~~~~vgfiDd~~~~~~~~g~~Vlg~ 59 (220)
T 4ea9_A 11 AIGGVVIIGGGGH------AKVVIESLR----ACGETVAAIVDADPTRRAVLGVPVVGD 59 (220)
T ss_dssp CSSCEEEECCSHH------HHHHHHHHH----HTTCCEEEEECSCC---CBTTBCEEES
T ss_pred CCCCEEEEcCCHH------HHHHHHHHH----hCCCEEEEEEeCCcccCcCCCeeEECC
Confidence 3357888886543 333334443 378876778887655444456776543
No 171
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=27.00 E-value=1.7e+02 Score=20.69 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 52 KIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 52 ~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+.... ...++++||++ ...+..++..|. ..|+ .+..+.|++.
T Consensus 240 ~l~~~l~~~-~~~~~lvf~~~-----~~~~~~l~~~L~----~~~~-~~~~~~~~~~ 285 (391)
T 1xti_A 240 KLFDLLDVL-EFNQVVIFVKS-----VQRCIALAQLLV----EQNF-PAIAIHRGMP 285 (391)
T ss_dssp HHHHHHHHS-CCSEEEEECSC-----HHHHHHHHHHHH----HTTC-CEEEECTTSC
T ss_pred HHHHHHHhc-CCCcEEEEeCc-----HHHHHHHHHHHH----hCCC-cEEEEeCCCC
Confidence 344444332 55789999964 333444555554 4787 6778888864
No 172
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=26.97 E-value=46 Score=20.63 Aligned_cols=38 Identities=18% Similarity=0.347 Sum_probs=24.0
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~ 109 (138)
+.|+|+|.+..-||+.|...+... .| .++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~-------~~-~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQY-------LG-DEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHH-------SC-TTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHh-------CC-CCEEEEcCcCCC
Confidence 369999987777777775333321 33 356677767654
No 173
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=26.84 E-value=1.1e+02 Score=19.70 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=30.4
Q ss_pred HHHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCC
Q 032540 11 SQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (138)
Q Consensus 11 ~~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~ 74 (138)
+++.+.|+..+.-++|+-+..+ . .+.+.++.....+.... .....-|++|.+|.
T Consensus 28 ~~i~~~L~~~G~eV~D~G~~~~-------~--~~dYpd~a~~va~~V~~-g~~d~GIliCGTGi 81 (155)
T 1o1x_A 28 EKVKNYLLGKGIEVEDHGTYSE-------E--SVDYPDYAKKVVQSILS-NEADFGILLCGTGL 81 (155)
T ss_dssp HHHHHHHHHTTCEEEECCCCSS-------S--CCCHHHHHHHHHHHHHT-TSCSEEEEEESSSH
T ss_pred HHHHHHHHHCCCEEEEeCCCCC-------C--CCChHHHHHHHHHHHHc-CCCceEEEEcCCcH
Confidence 3455566655689999976332 1 23333444344433322 23457899999874
No 174
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=26.65 E-value=24 Score=25.75 Aligned_cols=17 Identities=18% Similarity=0.405 Sum_probs=13.1
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 235 ~~~~PiVVHCSAGvGRT 251 (342)
T 3i36_A 235 PPESPILVHCSAGVGRT 251 (342)
T ss_dssp CSSCCEEEESSSSSHHH
T ss_pred CCCCCEEEEcCCCChHH
Confidence 45689999999887444
No 175
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=26.64 E-value=1.3e+02 Score=20.19 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=22.7
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
..++++.|-.|. ........++..|+ ..|| +|.+|
T Consensus 92 ~~~vll~~v~gd-~HdiG~~iv~~~l~----~~G~-~Vi~L 126 (215)
T 3ezx_A 92 AGLAITFVAEGD-IHDIGHRLVTTMLG----ANGF-QIVDL 126 (215)
T ss_dssp CCEEEEEECTTC-CCCHHHHHHHHHHH----HTSC-EEEEC
T ss_pred CCeEEEEeCCCC-hhHHHHHHHHHHHH----HCCC-eEEEc
Confidence 357899997776 45555555555554 5999 56555
No 176
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=26.09 E-value=2.1e+02 Score=21.73 Aligned_cols=41 Identities=7% Similarity=0.077 Sum_probs=25.5
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
..+..+||||.+ ...+..++..|.+. ...|+ .+..+.|++.
T Consensus 337 ~~~~~~iVF~~s-----~~~~~~l~~~L~~~-~~~~~-~v~~~h~~~~ 377 (563)
T 3i5x_A 337 DSNYKAIIFAPT-----VKFTSFLCSILKNE-FKKDL-PILEFHGKIT 377 (563)
T ss_dssp TTCCEEEEECSC-----HHHHHHHHHHHHHH-HTTTS-CEEEESTTSC
T ss_pred CCCCcEEEEcCc-----HHHHHHHHHHHHHh-ccCCc-eEEEecCCCC
Confidence 456789999964 33455555566441 11266 6788888864
No 177
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=26.07 E-value=2.4e+02 Score=22.08 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..+||||.+ ...+..++..|.. .|+ .+..+.||+.
T Consensus 266 ~~~~~IVf~~s-----r~~~e~la~~L~~----~g~-~~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFS-----QKDSEQVTVSLQN----LGI-HAGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSS-----HHHHHHHHHHHHH----TTC-CEEEECTTSC
T ss_pred cCCCeEEEeCc-----HHHHHHHHHHHHH----CCC-CEEEecCCCC
Confidence 46789999964 3345555566644 898 7888999974
No 178
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=25.97 E-value=56 Score=20.73 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=14.5
Q ss_pred CeEEEEeCCCCCCcHHHHH
Q 032540 64 DTLVFHCALSQVRGPTCAK 82 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~ 82 (138)
..|+|+|....-||+.|..
T Consensus 21 ~~VLFVC~gN~cRSpmAEa 39 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAA 39 (148)
T ss_dssp CEEEEEESSSSSHHHHHHH
T ss_pred CEEEEECCCchhHHHHHHH
Confidence 5699999877767777753
No 179
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=25.93 E-value=93 Score=21.25 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=22.0
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
-.+.++|.+...||..|= ..| ++.|| +|.-+
T Consensus 26 Lr~avVCaSN~NRSMEAH----~~L----~k~Gf-~V~Sf 56 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAH----NIL----SKRGF-SVRSF 56 (214)
T ss_dssp CEEEEEESSSSSHHHHHH----HHH----HHTTC-EEEEE
T ss_pred CeEEEECCCCcchhHHHH----HHH----HHCCC-ceEee
Confidence 458999999887887663 344 34999 77655
No 180
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=25.47 E-value=51 Score=23.52 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=15.6
Q ss_pred HHHHHHHHhhhhCCCccEEEeccch
Q 032540 83 RLANYLDEVKEDTGINSIFVLERGF 107 (138)
Q Consensus 83 ~~~~~L~~~l~~~G~~~v~~l~gG~ 107 (138)
.++.+|+ ++|..+..+|+||-
T Consensus 223 ela~~~~----~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 223 HLATMMK----AVGCYNAINLDGGG 243 (285)
T ss_dssp HHHHHHH----HHTCSEEEECCCGG
T ss_pred HHHHHHH----HcCCCeEEECCCCc
Confidence 3445554 48999999999984
No 181
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=25.34 E-value=1.1e+02 Score=19.50 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=18.3
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
+.+.||++.+.. .+......++..|. +.|| +|..++
T Consensus 21 ~~~~vv~~HG~~-~~~~~~~~~~~~l~----~~G~-~v~~~d 56 (251)
T 3dkr_A 21 TDTGVVLLHAYT-GSPNDMNFMARALQ----RSGY-GVYVPL 56 (251)
T ss_dssp SSEEEEEECCTT-CCGGGGHHHHHHHH----HTTC-EEEECC
T ss_pred CCceEEEeCCCC-CCHHHHHHHHHHHH----HCCC-EEEecC
Confidence 455666666544 22223334444454 3788 566554
No 182
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=25.29 E-value=1.1e+02 Score=21.52 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=24.7
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
...++++||++ ...+..++..|. ..|+ ++..+.|++.
T Consensus 242 ~~~~~lvf~~~-----~~~~~~l~~~l~----~~~~-~~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVAT-----KKTANVLYGKLK----SEGH-EVSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSC-----HHHHHHHHHHHH----HTTC-CCEEECTTSC
T ss_pred cCCCEEEEeCC-----HHHHHHHHHHHH----hcCC-cEEEeCCCCC
Confidence 45689999964 333445555554 4787 6888888864
No 183
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=25.26 E-value=1.3e+02 Score=18.97 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=24.0
Q ss_pred HHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEecc
Q 032540 55 DLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLER 105 (138)
Q Consensus 55 ~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~g 105 (138)
.+.+.+.+.+.|+++. .| .+..++..++..|. ..|. ++..+.+
T Consensus 31 ~~~~~i~~a~~I~i~G-~G--~S~~~a~~~~~~l~----~~g~-~~~~~~~ 73 (187)
T 3sho_A 31 AAVEAICRADHVIVVG-MG--FSAAVAVFLGHGLN----SLGI-RTTVLTE 73 (187)
T ss_dssp HHHHHHHHCSEEEEEC-CG--GGHHHHHHHHHHHH----HTTC-CEEEECC
T ss_pred HHHHHHHhCCEEEEEe-cC--chHHHHHHHHHHHH----hcCC-CEEEecC
Confidence 3333334455655544 44 35566656665554 4887 6777773
No 184
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=25.23 E-value=1.7e+02 Score=22.42 Aligned_cols=18 Identities=17% Similarity=0.337 Sum_probs=13.9
Q ss_pred cCCCeEEEEeCCCCCCcH
Q 032540 61 RGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~ 78 (138)
+...||||+|..|..|+.
T Consensus 444 ~~~~PivVHCsaG~GRTG 461 (532)
T 2b3o_A 444 PHAGPIIVHCSAGIGRTG 461 (532)
T ss_dssp TTCCCEEEECSSSSSHHH
T ss_pred CCCCCEEEEcCCCCchhH
Confidence 456899999998875543
No 185
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=25.17 E-value=1e+02 Score=19.94 Aligned_cols=9 Identities=22% Similarity=0.538 Sum_probs=4.5
Q ss_pred CCCccEEEec
Q 032540 95 TGINSIFVLE 104 (138)
Q Consensus 95 ~G~~~v~~l~ 104 (138)
.|| +|..++
T Consensus 38 ~g~-~v~~~D 46 (267)
T 3sty_A 38 SGH-NVTALD 46 (267)
T ss_dssp TTC-EEEEEC
T ss_pred cCC-eEEEec
Confidence 566 454443
No 186
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=24.94 E-value=1e+02 Score=19.92 Aligned_cols=8 Identities=13% Similarity=0.281 Sum_probs=3.8
Q ss_pred CCCccEEEe
Q 032540 95 TGINSIFVL 103 (138)
Q Consensus 95 ~G~~~v~~l 103 (138)
.|| +|..+
T Consensus 52 ~G~-~v~~~ 59 (286)
T 3qit_A 52 QGY-RVVAP 59 (286)
T ss_dssp TTC-EEEEE
T ss_pred cCe-EEEEE
Confidence 455 44444
No 187
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=24.85 E-value=75 Score=20.57 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=22.8
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~ 109 (138)
..|+|+|....-||+.|...+...+ . ++.+...|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~------~---~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL------P---SKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS------T---TSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc------C---CeEEEeeecCC
Confidence 4799999877777777763333211 1 25566666654
No 188
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=24.72 E-value=1.2e+02 Score=21.01 Aligned_cols=39 Identities=8% Similarity=0.054 Sum_probs=26.5
Q ss_pred CccccceecCCcchhHHHHHHHHHhcC--CCeEEEEeCCCC
Q 032540 36 GHITGSLHYPSDSFTDKIFDLIQEVRG--KDTLVFHCALSQ 74 (138)
Q Consensus 36 ghipgAi~ip~~~l~~~~~~~~~~~~~--~~~iv~~c~~g~ 74 (138)
.+.||.++++.+.+...+.++.+.+-. =+.+|++-..|+
T Consensus 82 ~~fPGTisl~~~tl~~~l~di~~sl~~~G~rrlvivNgHGG 122 (254)
T 3lub_A 82 RELPFCIHTRYATQQAILEDIVSSLHVQGFRKLLILSGHGG 122 (254)
T ss_dssp TTSTTCCBCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCTT
T ss_pred cCcCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEeCCch
Confidence 456999999999888777666655422 256666665555
No 189
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=24.71 E-value=2e+02 Score=20.72 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=23.4
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEecc
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLER 105 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~g 105 (138)
..+.+++|||++ ...+..+...|. ..|+ ++..+.|
T Consensus 359 ~~~~k~lVF~~~-----~~~~~~l~~~L~----~~~~-~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNY-----RETAKKIVNELV----KDGI-KAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSC-----HHHHHHHHHHHH----HTTC-CEEEECC
T ss_pred CCCCeEEEEEcc-----HHHHHHHHHHHH----HcCC-CcEEEec
Confidence 456789999964 334445555554 4788 6778888
No 190
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.66 E-value=1.3e+02 Score=18.50 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=19.4
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
.++++.|-.|. ........++..|+ ..|| +|.+|
T Consensus 4 ~~vvla~~~~d-~HdiG~~~v~~~l~----~~G~-~Vi~l 37 (137)
T 1ccw_A 4 KTIVLGVIGSD-CHAVGNKILDHAFT----NAGF-NVVNI 37 (137)
T ss_dssp CEEEEEEETTC-CCCHHHHHHHHHHH----HTTC-EEEEE
T ss_pred CEEEEEeCCCc-hhHHHHHHHHHHHH----HCCC-EEEEC
Confidence 46777776655 44444444555554 4888 45444
No 191
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=24.40 E-value=1.6e+02 Score=23.81 Aligned_cols=53 Identities=15% Similarity=0.144 Sum_probs=31.4
Q ss_pred cCCcchhHHHHHHHHHhcCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEE
Q 032540 44 YPSDSFTDKIFDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFV 102 (138)
Q Consensus 44 ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~ 102 (138)
+++..+......+.+.+.+.++|+||++... .+..++..+... |+.+|. ++.+
T Consensus 53 l~~~dm~~Av~~i~~aI~~~ekI~I~GH~D~-DGi~Saa~L~~~----L~~lG~-~v~~ 105 (666)
T 2zxr_A 53 LPLKGLREAAALLEEALRQGKRIRVHGDYDA-DGLTGTAILVRG----LAALGA-DVHP 105 (666)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCEEEEECCSSH-HHHHHHHHHHHH----HHHTTC-EEEE
T ss_pred CcchhHHHHHHHHHHHHHcCCeEEEEeccCC-chHHHHHHHHHH----HHHcCC-cEEE
Confidence 3445666666666666778899999998732 333333233333 455887 4543
No 192
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A
Probab=24.37 E-value=55 Score=25.18 Aligned_cols=53 Identities=4% Similarity=-0.002 Sum_probs=29.3
Q ss_pred hcCCCeEEEEeCCCCCC-cHHHHHHHHHHHHHhhhh-CCCccEEEeccchhhhhhC
Q 032540 60 VRGKDTLVFHCALSQVR-GPTCAKRLANYLDEVKED-TGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 60 ~~~~~~iv~~c~~g~~~-~~~~~~~~~~~L~~~l~~-~G~~~v~~l~gG~~~w~~~ 113 (138)
+..++++.+||+-+..+ +......+...+.+.|++ .|+ +++++-||+.++...
T Consensus 150 l~~~~~~~vy~G~dPTag~LHLGh~v~~~~~~~lQ~~~g~-~~iilI~D~~a~igd 204 (477)
T 1r6t_A 150 YENKKPFYLYTGRGPSSEAMHVGHLIPFIFTKWLQDVFNV-PLVIQMTDDEKYLWK 204 (477)
T ss_dssp HHTTCCEEEEEEECCCTTCCBGGGHHHHHHHHHHHHHHTC-CEEEEECHHHHHHHS
T ss_pred HhcCCCcEEEEcccCCCCCccHHHHHHHHHHHHHHHHhCC-cEEEEEecceeeecC
Confidence 34567899999655431 111122222121222455 787 688888888876553
No 193
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=24.36 E-value=1.6e+02 Score=19.96 Aligned_cols=11 Identities=9% Similarity=0.380 Sum_probs=6.7
Q ss_pred CeEEEEeCCCC
Q 032540 64 DTLVFHCALSQ 74 (138)
Q Consensus 64 ~~iv~~c~~g~ 74 (138)
+.|-|||.+..
T Consensus 10 ~~V~V~ggsr~ 20 (216)
T 1ydh_A 10 RKICVFCGSHS 20 (216)
T ss_dssp SEEEEECCSCC
T ss_pred CeEEEEeCCCC
Confidence 35777776543
No 194
>2bn8_A CEDA, cell division activator CEDA; cell division activator protein, cell cycle protein; NMR {Escherichia coli} PDB: 2d35_A
Probab=24.25 E-value=28 Score=19.56 Aligned_cols=49 Identities=8% Similarity=0.198 Sum_probs=27.5
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhCCCCccc
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCR 119 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~g~p~~~ 119 (138)
.++++||-|...-.-....- +++--||.+|.+|.|-+-++.-.|-...+
T Consensus 14 qqnrpvisyvprvepapp~h----------a~kmd~frdvw~lrgkyvafvl~ge~frr 62 (87)
T 2bn8_A 14 QQNRQIISYVPRTEPAPPEH----------AIKMDSFRDVWMLRGKYVAFVLMGESFLR 62 (87)
T ss_dssp -------CCCCCCCCBTTBS----------CBCTTTCTTEEEETTEEEEBCCSSSCCCB
T ss_pred hcCCcceeeccCCCCCCchH----------hhhcccchhheeeccceEEEEEechhhcc
Confidence 35678888886544222111 12447999999999999998777654444
No 195
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=24.08 E-value=1.3e+02 Score=18.55 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHhcCCCeEEEEeCC
Q 032540 49 FTDKIFDLIQEVRGKDTLVFHCAL 72 (138)
Q Consensus 49 l~~~~~~~~~~~~~~~~iv~~c~~ 72 (138)
+...+....+.++. ..++++|+-
T Consensus 48 ~~~~i~~~i~~~~~-~gvliLtDl 70 (142)
T 3bed_A 48 TQAKLAAILKEAGN-VPTLVLADL 70 (142)
T ss_dssp HHHHHHHHHHHHCS-CCEEEEESS
T ss_pred HHHHHHHHHHhcCC-CCEEEEEEC
Confidence 44556666666666 678888886
No 196
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=23.92 E-value=1.1e+02 Score=20.13 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=19.3
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
.+++||++.+..... .....++..|. +.|| +|..++
T Consensus 41 ~~~~vv~~hG~~~~~-~~~~~~~~~l~----~~g~-~v~~~d 76 (303)
T 3pe6_A 41 PKALIFVSHGAGEHS-GRYEELARMLM----GLDL-LVFAHD 76 (303)
T ss_dssp CSEEEEEECCTTCCG-GGGHHHHHHHH----HTTE-EEEEEC
T ss_pred CCeEEEEECCCCchh-hHHHHHHHHHH----hCCC-cEEEeC
Confidence 357777776554232 23333444443 3788 666555
No 197
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=23.62 E-value=66 Score=19.82 Aligned_cols=36 Identities=17% Similarity=0.274 Sum_probs=21.2
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 65 ~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.|+|+|....-||+.|...+... .+ .++.+...|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~-------~~-~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTL-------GA-GKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHH-------SB-TTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHH-------cC-CCEEEEcccCC
Confidence 68999987666776665333321 22 24666666654
No 198
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=23.52 E-value=88 Score=20.20 Aligned_cols=37 Identities=22% Similarity=0.414 Sum_probs=22.7
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~ 109 (138)
..|+|+|....-||+.|...+...+ . ++.+...|..+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~------~---~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH------P---ELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC------T---TCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc------C---CeEEEeeecCC
Confidence 4799999877777777753333211 1 25566666654
No 199
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=23.47 E-value=1.3e+02 Score=21.51 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=24.5
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
...++++||++ ...+..++..|.+ .|+ .+..+.|++.
T Consensus 265 ~~~~~lvf~~~-----~~~~~~l~~~L~~----~~~-~~~~~~~~~~ 301 (412)
T 3fht_A 265 TIAQAMIFCHT-----RKTASWLAAELSK----EGH-QVALLSGEMM 301 (412)
T ss_dssp SSSEEEEECSS-----HHHHHHHHHHHHH----TTC-CCEEECTTSC
T ss_pred CCCCEEEEeCC-----HHHHHHHHHHHHh----CCC-eEEEecCCCC
Confidence 44689999964 3334455555544 787 6788888853
No 200
>3no4_A Creatininase, creatinine amidohydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.00A {Nostoc punctiforme pcc 73102}
Probab=23.33 E-value=1.6e+02 Score=20.65 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=25.1
Q ss_pred CccccceecCCcchhHHHHHHHHHhc--CCCeEEEEeCCCC
Q 032540 36 GHITGSLHYPSDSFTDKIFDLIQEVR--GKDTLVFHCALSQ 74 (138)
Q Consensus 36 ghipgAi~ip~~~l~~~~~~~~~~~~--~~~~iv~~c~~g~ 74 (138)
.+.||.++++.+.+...+.++...+- .=+.+|++-..|+
T Consensus 91 ~~fpGTisl~~~t~~~~l~di~~sl~~~G~~~iv~vNgHGG 131 (267)
T 3no4_A 91 TAFPGTISLRPSTLIQVVRDYVTCLAKAGFSKFYFINGHGG 131 (267)
T ss_dssp TTSTTCBCCCHHHHHHHHHHHHHHHHHHTCCEEEEEECCTT
T ss_pred cCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence 34689999988887776666554432 2256666665555
No 201
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=23.17 E-value=1.3e+02 Score=21.57 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=24.1
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
..++++||++ ...+..++..|.+ .|+ ++..+.|++.
T Consensus 276 ~~~~lVf~~~-----~~~~~~l~~~L~~----~~~-~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNT-----KRKVDWLTEKMRE----ANF-TVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSS-----HHHHHHHHHHHHH----TTC-CCEEECTTSC
T ss_pred CCcEEEEEcC-----HHHHHHHHHHHHh----CCC-ceEEeeCCCC
Confidence 4578999964 3334455555544 888 6888898864
No 202
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=23.14 E-value=2.5e+02 Score=21.53 Aligned_cols=41 Identities=7% Similarity=0.082 Sum_probs=25.3
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.....+||||.+ ...+..++..|.+.+ ..|+ .+..+.|++.
T Consensus 286 ~~~~~~iVF~~t-----~~~~~~l~~~L~~~~-~~~~-~v~~~hg~~~ 326 (579)
T 3sqw_A 286 DSNYKAIIFAPT-----VKFTSFLCSILKNEF-KKDL-PILEFHGKIT 326 (579)
T ss_dssp TTCCEEEEECSS-----HHHHHHHHHHHHHHH-TTTS-CEEEESTTSC
T ss_pred CCCCcEEEECCc-----HHHHHHHHHHHHHhh-cCCC-cEEEecCCCC
Confidence 456789999964 344555555664411 1266 6788888864
No 203
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus}
Probab=23.08 E-value=81 Score=23.07 Aligned_cols=49 Identities=4% Similarity=-0.090 Sum_probs=27.5
Q ss_pred CCeEEEEeCCCCCCcHHHHH-HHHHHHHHhhhhCCCccEEEeccchhhhhh
Q 032540 63 KDTLVFHCALSQVRGPTCAK-RLANYLDEVKEDTGINSIFVLERGFKGWEA 112 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~-~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~ 112 (138)
+.+..+||+-+...+..... ...-.....|++.|+ +++++-|++.++..
T Consensus 38 ~~~~~vy~G~~PTg~lHlGhyl~~l~~~~~lQ~~G~-~~~~~i~D~~a~~~ 87 (348)
T 2j5b_A 38 GRIFTAYNGFEPSGRIHIAQALITVMNTNNMIECGG-QMIIYIADWFAKMN 87 (348)
T ss_dssp TCCEEEEEEECCCSSCBHHHHHHHHHHHHHHHHTTE-EEEEEECHHHHHHT
T ss_pred CCCCEEEeccCCCCCCchhHHHHHHHHHHHHHHcCC-cEEEEeccchhhhC
Confidence 45678888654432323332 111111124567898 68888888888764
No 204
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=23.04 E-value=1.6e+02 Score=20.50 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=24.2
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
....+++||++ ...+..++..|. ..|+ ++..+.|++.
T Consensus 237 ~~~~~lvf~~~-----~~~~~~l~~~L~----~~~~-~~~~~~~~~~ 273 (367)
T 1hv8_A 237 KEFYGLVFCKT-----KRDTKELASMLR----DIGF-KAGAIHGDLS 273 (367)
T ss_dssp TTCCEEEECSS-----HHHHHHHHHHHH----HTTC-CEEEECSSSC
T ss_pred CCCcEEEEECC-----HHHHHHHHHHHH----hcCC-CeEEeeCCCC
Confidence 45678999964 333444555554 4887 6788888864
No 205
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=22.97 E-value=1.3e+02 Score=21.54 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=24.3
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
...++++||++ ...+..++..|. ..|+ .+..+.|++.
T Consensus 257 ~~~~~lVf~~~-----~~~~~~l~~~L~----~~~~-~~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNS-----TNRVELLAKKIT----DLGY-SCYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSS-----HHHHHHHHHHHH----HHTC-CEEEECTTSC
T ss_pred CCCcEEEEEec-----HHHHHHHHHHHH----hcCC-CeEEecCCCC
Confidence 45689999964 233444555554 4787 6788888874
No 206
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=22.90 E-value=1.6e+02 Score=20.15 Aligned_cols=55 Identities=22% Similarity=0.176 Sum_probs=30.3
Q ss_pred HHHHhhhCCCCeEEEEecC-CCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCC
Q 032540 11 SQLLSLKRRPNIAVIDVRD-DERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (138)
Q Consensus 11 ~~~~~~l~~~~~~liDvR~-~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~ 74 (138)
+.+.+.+...++-++|+-. ..... .+.+..+.......... .....-|+.|.+|.
T Consensus 23 ~~l~~~L~~~G~eV~D~G~~~~~~~--------~~dYpd~a~~vA~~V~~-g~~d~GIliCGTGi 78 (214)
T 3ono_A 23 GELNSVAGGLGHDVFNVGMTDENDH--------HLTYIHLGIMASILLNS-KAVDFVVTGCGTGQ 78 (214)
T ss_dssp HHHHHHHHHTTCEEEECSCSSTTSS--------CCCHHHHHHHHHHHHHT-TSCSEEEEEESSSH
T ss_pred HHHHHHHHHCCCEEEEcCCCCCCCC--------CCCHHHHHHHHHHHHHc-CCCCEEEEEcCCcH
Confidence 3566677655688999974 12111 23333333333333322 23456799999984
No 207
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=22.89 E-value=1.5e+02 Score=20.48 Aligned_cols=39 Identities=10% Similarity=0.179 Sum_probs=23.7
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
..+.++||||+. ......+...|.+ ..|+ .+..+.|+..
T Consensus 110 ~~~~kvlIFs~~-----~~~~~~l~~~L~~---~~g~-~~~~l~G~~~ 148 (271)
T 1z5z_A 110 DEGDKIAIFTQF-----VDMGKIIRNIIEK---ELNT-EVPFLYGELS 148 (271)
T ss_dssp HTTCCEEEEESC-----HHHHHHHHHHHHH---HHCS-CCCEECTTSC
T ss_pred hCCCeEEEEecc-----HHHHHHHHHHHHH---hcCC-cEEEEECCCC
Confidence 356789999964 2334344444432 1387 5677888864
No 208
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=22.80 E-value=1.2e+02 Score=20.10 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=22.9
Q ss_pred CCeEEEEeCCCCCCc------HHHHHHHHHHHHHhhhhCCCccEEEeccchhhh
Q 032540 63 KDTLVFHCALSQVRG------PTCAKRLANYLDEVKEDTGINSIFVLERGFKGW 110 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~------~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w 110 (138)
+-.++.++..|...+ ......++..+...+...+.+++.++--++-++
T Consensus 73 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 126 (315)
T 4f0j_A 73 GYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHSMGGM 126 (315)
T ss_dssp TCEEEEECCTTSTTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEEEEEETHHHH
T ss_pred CCeEEEeecCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCceEEEEecHHHH
Confidence 466777775543111 111122223333344557777776664455444
No 209
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=22.77 E-value=71 Score=25.63 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=16.9
Q ss_pred HHHHhcCCCeEEEEeCCCCCCcH
Q 032540 56 LIQEVRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 56 ~~~~~~~~~~iv~~c~~g~~~~~ 78 (138)
+.+.++.+..++|+|..|..|..
T Consensus 523 ~v~~lp~~~~v~vHC~aG~GRTt 545 (629)
T 3f41_A 523 FTRTMPANAWLHFHCQAGAGRTT 545 (629)
T ss_dssp HHHHSCTTCEEEEECSSSSHHHH
T ss_pred HHHhcCCCCCEEEeCCCCCchHH
Confidence 34446778899999999875543
No 210
>2g3w_A YAEQ protein, hypothetical protein XAC2396; xanthomonas axonopodis PV citri, unknown funct; HET: MSE; 1.90A {Xanthomonas axonopodis PV} SCOP: c.52.1.33
Probab=22.36 E-value=1.4e+02 Score=19.88 Aligned_cols=14 Identities=14% Similarity=-0.149 Sum_probs=10.7
Q ss_pred cCCCeEEEEeCCCC
Q 032540 61 RGKDTLVFHCALSQ 74 (138)
Q Consensus 61 ~~~~~iv~~c~~g~ 74 (138)
.+.+.|+|||.++.
T Consensus 97 ~ra~~V~vy~yg~~ 110 (182)
T 2g3w_A 97 NRSREAVVIGYGGQ 110 (182)
T ss_dssp HHSSEEEEEECCTH
T ss_pred ccCCeEEEEecCCc
Confidence 45678999998653
No 211
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=22.27 E-value=41 Score=23.91 Aligned_cols=17 Identities=29% Similarity=0.616 Sum_probs=13.3
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
....||||+|..|..|+
T Consensus 220 ~~~~PivVHCsaGvGRT 236 (297)
T 1jln_A 220 EGRGPVVVHCSAGIGRT 236 (297)
T ss_dssp TTSCCEEEESSSSSHHH
T ss_pred CCCCCEEEEeCCCchhh
Confidence 45689999999887554
No 212
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=22.23 E-value=1.4e+02 Score=18.10 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=29.1
Q ss_pred cCCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhh-----hhhCCCCcccc
Q 032540 61 RGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG-----WEASGKPVCRC 120 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~-----w~~~g~p~~~~ 120 (138)
-.+.+||+....-..... ...+.. .|...|. .+.-+.|+-.. ....|+|+...
T Consensus 45 F~~aPVVlDl~~l~~~~d--l~~L~~----~l~~~gl-~~vGV~g~~~~~~~~~a~~~GLp~l~~ 102 (120)
T 3ghf_A 45 LKHAPVVINVSGLESPVN--WPELHK----IVTSTGL-RIIGVSGCKDASLKVEIDRMGLPLLTE 102 (120)
T ss_dssp HTTCEEEEEEEECCSSCC--HHHHHH----HHHTTTC-EEEEEESCCCHHHHHHHHHHTCCEECC
T ss_pred hCCCcEEEEccccCChHH--HHHHHH----HHHHcCC-EEEEEeCCCcHHHHHHHHHCCCCccCC
Confidence 367899887643210111 112223 3456998 56667775433 24468988764
No 213
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=21.86 E-value=1.3e+02 Score=20.34 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=22.0
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEe
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVL 103 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l 103 (138)
-.+.++|.+...||..|= ..|+ +.|| +|.-+
T Consensus 10 l~~avVCaSN~NRSMEaH----~~L~----k~G~-~V~Sf 40 (198)
T 3p9y_A 10 LAVAVVDSSNMNRSMEAH----NFLA----KKGF-NVRSY 40 (198)
T ss_dssp CEEEEEESSSSSHHHHHH----HHHH----HTTC-EEEEE
T ss_pred ceEEEEcCCCCcccHHHH----HHHH----hCCC-ceeec
Confidence 578999999887876653 3443 4899 67644
No 214
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.81 E-value=70 Score=20.58 Aligned_cols=29 Identities=14% Similarity=0.299 Sum_probs=17.6
Q ss_pred eEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 65 TLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 65 ~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
+|+| ...|. .+..+| ..|.+ .|+ +|.+++
T Consensus 4 dV~I-IGaGp-aGL~aA----~~La~----~G~-~V~v~E 32 (336)
T 3kkj_A 4 PIAI-IGTGI-AGLSAA----QALTA----AGH-QVHLFD 32 (336)
T ss_dssp CEEE-ECCSH-HHHHHH----HHHHH----TTC-CEEEEC
T ss_pred CEEE-ECcCH-HHHHHH----HHHHH----CCC-CEEEEE
Confidence 3444 45555 555555 44443 898 788887
No 215
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=21.79 E-value=81 Score=19.33 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=24.1
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKG 109 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~ 109 (138)
..|+|+|.+..-||+.|...+... .| .++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~-------~~-~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEI-------LG-EGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHH-------ST-TTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHh-------cC-CCEEEEcCcCCC
Confidence 469999987777777776333321 33 356667767654
No 216
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=21.70 E-value=1.3e+02 Score=19.65 Aligned_cols=10 Identities=10% Similarity=-0.316 Sum_probs=5.3
Q ss_pred CeEEEEeCCC
Q 032540 64 DTLVFHCALS 73 (138)
Q Consensus 64 ~~iv~~c~~g 73 (138)
++.||++.+.
T Consensus 40 ~~~vv~~HG~ 49 (270)
T 3rm3_A 40 PVGVLLVHGF 49 (270)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEEECCC
Confidence 4555556543
No 217
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=21.65 E-value=1.6e+02 Score=18.49 Aligned_cols=38 Identities=13% Similarity=0.138 Sum_probs=19.3
Q ss_pred CCCeEEEEeCCC----CCCcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 62 GKDTLVFHCALS----QVRGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 62 ~~~~iv~~c~~g----~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
...++||++.++ ..........++..| .+.|| .|..++
T Consensus 35 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l----~~~g~-~v~~~d 76 (220)
T 2fuk_A 35 VQPVTAIVCHPLSTEGGSMHNKVVTMAARAL----RELGI-TVVRFN 76 (220)
T ss_dssp CCSEEEEEECSCTTTTCSTTCHHHHHHHHHH----HTTTC-EEEEEC
T ss_pred cccCEEEEECCCCCcCCcccchHHHHHHHHH----HHCCC-eEEEEe
Confidence 346788888752 212222223344444 34788 566554
No 218
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=21.62 E-value=1e+02 Score=22.27 Aligned_cols=47 Identities=11% Similarity=0.110 Sum_probs=26.7
Q ss_pred CeEEEEeCCCCCCc-HHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 64 DTLVFHCALSQVRG-PTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 64 ~~iv~~c~~g~~~~-~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
+++.+||+-..... ......+.-..-..|++.|+ +++++-||+.++.
T Consensus 32 ~~~~vy~G~~PTg~slHlGh~l~l~~~~~lQ~~g~-~~~~~i~D~~a~~ 79 (322)
T 2yxn_A 32 GPIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGH-KPVALVGGATGLI 79 (322)
T ss_dssp SCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTC-EEEEEECTTGGGT
T ss_pred CCCEEEEeecCCCCcccHHHHHHHHHHHHHHHcCC-cEEEEEccceeee
Confidence 45678886444222 22333222121224677898 6888888888875
No 219
>3b55_A Succinoglycan biosynthesis protein; Q81BN2, NESG, BCR135, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus cereus atcc 14579} SCOP: c.150.1.3 PDB: 2rad_A
Probab=21.61 E-value=2.7e+02 Score=21.14 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchh
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFK 108 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~ 108 (138)
.+..||+...+....+..-. .-+..++..-++.|| ++..+++++.
T Consensus 73 ~~ariV~lGEatHG~~ef~~-~r~~l~r~Lve~~Gf-~~va~E~d~~ 117 (451)
T 3b55_A 73 GSASIVGLGEATHGAHEVFT-MKHRIVKYLVSEKGF-TNLVLEEGWD 117 (451)
T ss_dssp TTCSEEEEEESCTTBHHHHH-HHHHHHHHHHHHSCC-CEEEEEEEHH
T ss_pred cCCCEEEEeCCCCCchHHHH-HHHHHHHHHHHhcCC-eEEEEecChH
Confidence 56789999985442332221 111222223356899 7888998874
No 220
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=21.58 E-value=1.6e+02 Score=22.52 Aligned_cols=17 Identities=24% Similarity=0.388 Sum_probs=13.3
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 450 ~~~~PivVHCsaGvGRT 466 (525)
T 2shp_A 450 MDAGPVVVHCSAGIGRT 466 (525)
T ss_dssp TTCCCEEEECSSSSHHH
T ss_pred CCCCCEEEEcCCCCchh
Confidence 45689999999887444
No 221
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=21.17 E-value=1.6e+02 Score=23.03 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=13.3
Q ss_pred cCCCeEEEEeCCCCCCc
Q 032540 61 RGKDTLVFHCALSQVRG 77 (138)
Q Consensus 61 ~~~~~iv~~c~~g~~~~ 77 (138)
+...||||+|..|..|+
T Consensus 444 ~~~~PivVHCsaGvGRT 460 (595)
T 3ps5_A 444 PHAGPIIVHSSAGIGRT 460 (595)
T ss_dssp TTCCCEEEECSSSSHHH
T ss_pred CCCCCEEEEcCCCCchH
Confidence 45689999999887444
No 222
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=21.01 E-value=1.8e+02 Score=18.88 Aligned_cols=54 Identities=6% Similarity=-0.092 Sum_probs=29.7
Q ss_pred HHHhhhCCCCeEEEEecCCCccCCCccccceecCCcchhHHHHHHHHHhcCCCeEEEEeCCCC
Q 032540 12 QLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKIFDLIQEVRGKDTLVFHCALSQ 74 (138)
Q Consensus 12 ~~~~~l~~~~~~liDvR~~~e~~~ghipgAi~ip~~~l~~~~~~~~~~~~~~~~iv~~c~~g~ 74 (138)
.+.+.|+..++-++|+-+..+ + . .+.+.++.......... ...+.-|++|.+|.
T Consensus 20 ~i~~~L~~~G~eV~D~G~~~~-~-----~--~~dYpd~a~~va~~V~~-g~~d~GIliCGTGi 73 (162)
T 2vvp_A 20 RIIEHLKQTGHEPIDCGALRY-D-----A--DDDYPAFCIAAATRTVA-DPGSLGIVLGGSGN 73 (162)
T ss_dssp HHHHHHHHTTCEEEECSCCSC-C-----T--TCCHHHHHHHHHHHHHH-STTCEEEEEESSSH
T ss_pred HHHHHHHHCCCEEEEeCCCCC-C-----C--CCChHHHHHHHHHHHHc-CCCceEEEEeCCcH
Confidence 355566655689999976322 1 0 22333343334333322 34467899999974
No 223
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=20.94 E-value=1.2e+02 Score=22.94 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=26.2
Q ss_pred CeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhh
Q 032540 64 DTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWE 111 (138)
Q Consensus 64 ~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~ 111 (138)
..-+++|++|. -+..+|-+++. ...|-+++..++|||.+|.
T Consensus 125 ~~~v~f~~sGs-EA~e~AlklAr------~~t~r~~ii~~~~~yHG~t 165 (456)
T 4atq_A 125 AKRTVLFNSGA-EAVENAVKVAR------LATGRDAVVAFDHAYHGRT 165 (456)
T ss_dssp CEEEEEESSHH-HHHHHHHHHHH------HHHCCCEEEEETTCCCCSS
T ss_pred CcEEEEeCChH-HHHHHHHHHHh------hhhcCCeEEEEecccCCcc
Confidence 45688898775 33334434442 2356667888999998874
No 224
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix}
Probab=20.46 E-value=71 Score=23.53 Aligned_cols=51 Identities=10% Similarity=0.007 Sum_probs=26.5
Q ss_pred CCCeEEEEeCCCCCCcHHHHHHHHHHHHHhhhhCCCccEEEeccchhhhhhC
Q 032540 62 GKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~ 113 (138)
.+.+..+||+-............+-.-...|++.|+ +++++-+++.++...
T Consensus 32 ~~~~~~iy~G~~PTg~lHlG~l~~l~~~~~lQ~~G~-~~~~~iaD~~a~~~~ 82 (364)
T 2cya_A 32 SGARIKGYIGYEPSGVAHIGWLVWMYKVKDLVEAGV-DFSVLEATWHAYIND 82 (364)
T ss_dssp HCSCCEEEEEECCCSSCBTHHHHHHHHHHHHHHTTC-EEEEEECHHHHHHTT
T ss_pred cCCCCEEEeccCCCCCccHhHHHHHHHHHHHHHCCC-CEEEEEeCcchhhCC
Confidence 345667888533211112222111111123566898 688888888888643
No 225
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii}
Probab=20.42 E-value=64 Score=23.92 Aligned_cols=51 Identities=12% Similarity=0.012 Sum_probs=27.6
Q ss_pred CCCeEEEEeCCCCCCcHHHHH-HHHHHHHHhhhhCCCccEEEeccchhhhhhC
Q 032540 62 GKDTLVFHCALSQVRGPTCAK-RLANYLDEVKEDTGINSIFVLERGFKGWEAS 113 (138)
Q Consensus 62 ~~~~iv~~c~~g~~~~~~~~~-~~~~~L~~~l~~~G~~~v~~l~gG~~~w~~~ 113 (138)
.+.+..+||+-....+..... ..+-.-...|++.|+ +++++-+++.++...
T Consensus 30 ~~~~~~vy~G~~PTg~lHlG~yl~~l~~~~~lQ~~G~-~~~~~iaD~ha~~~~ 81 (375)
T 2cyc_A 30 IGAPLQHYIGFEISGYIHLGTGLMAGAKIADFQKAGI-KTRVFLADWHSWIND 81 (375)
T ss_dssp HTCCCBEEEEECCCSCCBHHHHHHHHHHHHHHHHTTC-BCEEEECHHHHHHTT
T ss_pred cCCCcEEEeCCCCCCCcCchHHHHHHHHHHHHHHCCC-cEEEEecCcEEEcCC
Confidence 344667888543322222232 111111124577898 678888888888643
No 226
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=20.38 E-value=1e+02 Score=15.82 Aligned_cols=27 Identities=33% Similarity=0.337 Sum_probs=18.5
Q ss_pred CcHHHHHHHHHHHHHhhhhCCCccEEE
Q 032540 76 RGPTCAKRLANYLDEVKEDTGINSIFV 102 (138)
Q Consensus 76 ~~~~~~~~~~~~L~~~l~~~G~~~v~~ 102 (138)
|...-+..++..|.+.+..+||.++-+
T Consensus 11 rtkkeaekfaailikvfaelgyndinv 37 (62)
T 2gjh_A 11 RTKKEAEKFAAILIKVFAELGYNDINV 37 (62)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCSCEE
T ss_pred cchhHHHHHHHHHHHHHHHhCccccee
Confidence 344556667777777778899986643
No 227
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=20.19 E-value=2e+02 Score=22.56 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=20.8
Q ss_pred CCeEEEEeCCCCCCcHHHHHHHHHHHHHh--hhhCCCccEEEeccc
Q 032540 63 KDTLVFHCALSQVRGPTCAKRLANYLDEV--KEDTGINSIFVLERG 106 (138)
Q Consensus 63 ~~~iv~~c~~g~~~~~~~~~~~~~~L~~~--l~~~G~~~v~~l~gG 106 (138)
+..+||||.+ ...+..++..|... |...|+ ++..+.|+
T Consensus 400 ~~~~IVF~~s-----~~~~~~l~~~L~~~~~l~~~g~-~~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKT-----RQSAYALSQWITENEKFAEVGV-KAHHLIGA 439 (699)
T ss_dssp CCCEEEECSC-----HHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECc-----HHHHHHHHHHHHhCccccccCc-ceEEEECC
Confidence 6789999964 34455566666431 112277 67778887
No 228
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=20.11 E-value=2e+02 Score=19.06 Aligned_cols=38 Identities=18% Similarity=0.093 Sum_probs=20.0
Q ss_pred CCCeEEEEeCCCCC--CcHHHHHHHHHHHHHhhhhCCCccEEEec
Q 032540 62 GKDTLVFHCALSQV--RGPTCAKRLANYLDEVKEDTGINSIFVLE 104 (138)
Q Consensus 62 ~~~~iv~~c~~g~~--~~~~~~~~~~~~L~~~l~~~G~~~v~~l~ 104 (138)
...++||++.+|.. ........++..| .+.|| .|..++
T Consensus 48 ~~~p~vv~lHGgg~~~~~~~~~~~~~~~l----~~~G~-~v~~~d 87 (283)
T 3bjr_A 48 TNLPAIIIVPGGSYTHIPVAQAESLAMAF----AGHGY-QAFYLE 87 (283)
T ss_dssp CCEEEEEEECCSTTTCCCHHHHHHHHHHH----HTTTC-EEEEEE
T ss_pred CCCcEEEEECCCccccCCccccHHHHHHH----HhCCc-EEEEEe
Confidence 44677888876431 2223333344444 34798 565544
No 229
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=20.01 E-value=80 Score=25.33 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=16.6
Q ss_pred HHHHhcCCCeEEEEeCCCCCCcH
Q 032540 56 LIQEVRGKDTLVFHCALSQVRGP 78 (138)
Q Consensus 56 ~~~~~~~~~~iv~~c~~g~~~~~ 78 (138)
+.+.++.+..|+|+|..|..|..
T Consensus 225 ~v~~l~~~~~i~vHC~AG~GRTg 247 (629)
T 3f41_A 225 FYKSLPKDAWLHYHCYAGMGRTT 247 (629)
T ss_dssp HHHTSCTTCEEEEECSSSSHHHH
T ss_pred HHHhcCCCCCEEEECCCCCCHHH
Confidence 34445777899999999875543
Done!