Citrus Sinensis ID: 032542

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
cEEEEEEccccccccEEEcEEEEEcccHHHHHHHHHHccccEEEcEEcccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHHccEEEHccHHHcccccHccccccccEEEEEcccccccccccccHccccccEEEEEccHHHHHHHHHHcccEEEEEccccEEEEEcccccccEEEEEEcc
Coil and Loop (DISEMBL)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
*VVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
MVVNLL*HICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.833	0.898	0.305	2e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.746	0.585	0.304	4e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.804	0.623	0.256	0.0003
Q2KIZ3	175	Methylmalonyl-CoA epimera	yes	no	0.775	0.611	0.264	0.0009
P52096	129	Uncharacterized protein Y	N/A	no	0.876	0.937	0.251	0.0009

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 75
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 131
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 132 E 132
           E
Sbjct: 124 E 124

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 73
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 74  P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 122
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 123 TRDPD 127
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 73
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    ++ +G   + L+  L +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHGVSVVFVNLGNTKMELLHPLGS 106

Query: 74  PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 126
             P++G  +    G   H CI + ++S   M L K  I        +   G+P IF    
Sbjct: 107 DSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIFLHPK 166

Query: 127 DANAL 131
           D   +
Sbjct: 167 DCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q2KIZ3|MCEE_BOVIN Methylmalonyl-CoA epimerase, mitochondrial OS=Bos taurus GN=MCEE PE=2 SV=1

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 73
           ++HV +   +LE++  FY+N+LG E+ E  P   LP  G    ++ +G   + L+  L +
Sbjct: 47  LNHVAVAVPDLEKARAFYKNVLGAEVGEPVP---LPEHGVSVVFVNLGNTKMELLHPLGS 103

Query: 74  PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 126
             P++G  +    G   H CI + +++   M L +  I        +   G+P IF    
Sbjct: 104 DSPIAGFLKKNKAGGMHHVCIEVDNINVAVMDLKEKKIRILSEEAKIGAHGKPVIFLHPS 163

Query: 127 D 127
           D
Sbjct: 164 D 164

Bos taurus (taxid: 9913)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|P52096|YAER_ECOLI Uncharacterized protein YaeR OS=Escherichia coli (strain K12) GN=yaeR PE=4 SV=1

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 6/127 (4%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           G+  VHH+ I+  +   S  FY +ILG  + +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 128
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDG 121

Query: 129 NALEFTQ 135
             LE  +
Sbjct: 122 LPLELYE 128

Escherichia coli (strain K12) (taxid: 83333)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
388493084	200	unknown [Lotus japonicus]	0.913	0.63	0.920	7e-66
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.905	0.634	0.928	3e-65
297796591	196	lactoylglutathione lyase family protein	0.905	0.637	0.928	4e-65
226495911	193	glyoxalase/bleomycin resistance protein/	0.905	0.647	0.92	2e-64
449489903	206	PREDICTED: uncharacterized LOC101203815	0.920	0.616	0.913	4e-64
449452528	175	PREDICTED: uncharacterized protein LOC10	0.920	0.725	0.913	5e-64
359807103	206	uncharacterized protein LOC100805881 [Gl	0.920	0.616	0.897	8e-64
356547897	209	PREDICTED: uncharacterized protein LOC10	0.913	0.602	0.896	1e-63
358347730	129	Glyoxalase/bleomycin resistance protein/	0.905	0.968	0.904	2e-63
414869121	226	TPA: glyoxalase/bleomycin resistance pro	0.934	0.570	0.837	1e-60

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  254 bits (649), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 116/126 (92%), Positives = 124/126 (98%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVVS+HHVGILCENLER L+FYQN+LGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 74  DYGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 133

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYTLS+SGRPAIFTRDPDANAL
Sbjct: 134 PNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSGRPAIFTRDPDANAL 193

Query: 132 EFTQVD 137
           EFTQ+D
Sbjct: 194 EFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 73  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query: 132 EFTQV 136
           EFTQV
Sbjct: 193 EFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  252 bits (643), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 72  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 131

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct: 132 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 191

Query: 132 EFTQV 136
           EFTQV
Sbjct: 192 EFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495911|ref|NP_001147026.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays] gi|195606588|gb|ACG25124.1| glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/125 (92%), Positives = 120/125 (96%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 69  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 128

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPD NAL
Sbjct: 129 PNPDPLTGRPEHGGRDRHACIAIRDVSVLKEILDKAGIAYTMSKSGRPAIFTRDPDTNAL 188

Query: 132 EFTQV 136
           EFTQV
Sbjct: 189 EFTQV 193

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  248 bits (634), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 120/127 (94%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMEL
Sbjct: 80  DYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMEL 139

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANAL
Sbjct: 140 PNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANAL 199

Query: 132 EFTQVDG 138
           EFTQVDG
Sbjct: 200 EFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  248 bits (634), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 116/127 (91%), Positives = 120/127 (94%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYG V VHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMEL
Sbjct: 49  DYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMEL 108

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANAL
Sbjct: 109 PNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANAL 168

Query: 132 EFTQVDG 138
           EFTQVDG
Sbjct: 169 EFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  248 bits (632), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 114/127 (89%), Positives = 120/127 (94%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVV +HHVGILCENLERSLEFYQN+LGL+INEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct: 80  DYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLPYRGAWLWVGSEMIHLMEL 139

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTLS SGRPAIF RDPDANAL
Sbjct: 140 PNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTLSHSGRPAIFARDPDANAL 199

Query: 132 EFTQVDG 138
           EFTQVDG
Sbjct: 200 EFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 113/126 (89%), Positives = 122/126 (96%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           DYGVV +HHVGILCENLERSL+FYQN+LGL+INEARPH+KLPYRGAWLWVG+EMIHLMEL
Sbjct: 83  DYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRGAWLWVGSEMIHLMEL 142

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
           PNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS SGRPAIFTRDPDANAL
Sbjct: 143 PNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHSGRPAIFTRDPDANAL 202

Query: 132 EFTQVD 137
           EFTQVD
Sbjct: 203 EFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347730|ref|XP_003637907.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula] gi|355503842|gb|AES85045.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Medicago truncatula]

 Score =  246 bits (629), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 113/125 (90%), Positives = 122/125 (97%)

Query: 13  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           YGVVSVHHVGILCENLERSL+FYQN+LGL+INEARPHDKLPYRG WLWVG+EMIHLMELP
Sbjct: 4   YGVVSVHHVGILCENLERSLDFYQNVLGLKINEARPHDKLPYRGTWLWVGSEMIHLMELP 63

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 132
           NPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAG+ YTLS+SGRPAIFTRDPDANALE
Sbjct: 64  NPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGVPYTLSRSGRPAIFTRDPDANALE 123

Query: 133 FTQVD 137
           FTQ+D
Sbjct: 124 FTQID 128

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414869121|tpg|DAA47678.1| TPA: glyoxalase/bleomycin resistance protein/dioxygenase [Zea mays]

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/129 (83%), Positives = 118/129 (91%)

Query: 8   HICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH 67
           H   DYGVVS+HHVGILCENLERSL FY+++LGL +N ARP+DKLPYRGAWLWVG+EMIH
Sbjct: 98  HAEPDYGVVSIHHVGILCENLERSLAFYKDLLGLRVNPARPNDKLPYRGAWLWVGSEMIH 157

Query: 68  LMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPD 127
           LMELPNPDPL+GRPEHGGRDRHTCIAIRDV KLK + D+AGISYTLSKSGRPAIF RDPD
Sbjct: 158 LMELPNPDPLTGRPEHGGRDRHTCIAIRDVLKLKEVFDEAGISYTLSKSGRPAIFARDPD 217

Query: 128 ANALEFTQV 136
            NALEFTQV
Sbjct: 218 GNALEFTQV 226

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.905	0.634	0.928	4.8e-62
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.876	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.876	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.847	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.840	0.630	0.296	7.6e-09
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.833	0.905	0.296	1.1e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.833	0.905	0.296	1.1e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.797	0.582	0.285	2.3e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.847	0.914	0.284	3.8e-07
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.797	0.625	0.293	6.1e-07

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 116/125 (92%), Positives = 121/125 (96%)

Query:    12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
             DYGVV VHHVG+LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMEL
Sbjct:    73 DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query:    72 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL 131
             PNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANAL
Sbjct:   133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANAL 192

Query:   132 EFTQV 136
             EFTQV
Sbjct:   193 EFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:    75 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 129
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   130 ALEFTQVD 137
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:    75 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 129
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   130 ALEFTQVD 137
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    18 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 75
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:    76 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 131
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   132 EFTQV 136
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:    75 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 127
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   128 ANALE 132
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    18 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    75 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 130
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   131 LEFTQ 135
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    18 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:    75 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 130
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   131 LEFTQ 135
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 73
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:    74 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 125
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   126 PDANAL 131
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    18 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:    77 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 132
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   133 FTQ 135
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 73
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:    74 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 125
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   126 PDANAL 131
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P45871	YWKD_BACSU	No assigned EC number	0.3057	0.8333	0.8984	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G57040	lactoylglutathione lyase family protein / glyoxalase I family protein; lactoylglutathione lyase family protein / glyoxalase I family protein; FUNCTIONS IN- catalytic activity; INVOLVED IN- metabolic process; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro-IPR004360); BEST Arabidopsis thaliana protein match is- lactoylglutathione lyase family protein / glyoxalase I family protein (TAIR-AT1G80160.1); Has 744 Blast hits to 744 proteins in 277 species- A [...] (197 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT2G45870	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (410 aa)							•		0.883
	AT1G65230	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (286 aa)				•			•		0.832
	AT2G12280	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (90 aa)							•		0.825
	AT2G12200	ligase, putative; ligase, putative; FUNCTIONS IN- formate-tetrahydrofolate ligase activity, lig [...] (63 aa)							•		0.825
	AT2G42750	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (344 aa)				•			•		0.785
	AT5G03880	electron carrier; electron carrier; FUNCTIONS IN- electron carrier activity; INVOLVED IN- cell [...] (339 aa)				•					0.698
	AT5G37360	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (309 aa)				•					0.690
	MSRB1	MSRB1 (methionine sulfoxide reductase B 1); peptide-methionine-(S)-S-oxide reductase; methionin [...] (202 aa)				•					0.681
	AT1G52870	peroxisomal membrane protein-related; peroxisomal membrane protein-related; FUNCTIONS IN- molec [...] (366 aa)				•					0.677
	AT5G57345	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (188 aa)				•					0.667

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	138
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-33
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-12
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	2e-11
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	5e-11
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	3e-10
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-07
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	5e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	2e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	3e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	8e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.001

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  113 bits (285), Expect = 1e-33
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 76
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 133
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 59.4 bits (144), Expect = 2e-12
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 78  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 133
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 57.3 bits (139), Expect = 1e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 75
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 127
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 128 ANALEFTQ 135
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 56.3 bits (136), Expect = 2e-11
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 80  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 133
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 55.8 bits (135), Expect = 5e-11
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 26  ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 83
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 84  GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 133
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 54.0 bits (129), Expect = 3e-10
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 71
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 72  -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 120
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 121 -IFTRDPDANALEFTQ 135
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 128
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 129 NALEFTQ 135
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 46.7 bits (111), Expect = 1e-07
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 82
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 83  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 133
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 18  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 127
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 128 ANALEFT 134
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 5e-06
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 15/128 (11%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 75  -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 125
            +P +G P  G      C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGPGS--DDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 126 PDANALEF 133
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 77
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 78  SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 127
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 76
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 77  LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 109
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.3 bits (95), Expect = 3e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 79  GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 124
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 27  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 84
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 85  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 133
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 134 T 134
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 10/25 (40%), Positives = 19/25 (76%)

Query: 18 VHHVGILCENLERSLEFYQNILGLE 42
          + H+GI   +LE +L+FY+++LG+ 
Sbjct: 1  IDHIGIAVPDLEAALKFYRDVLGVG 25

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.92
PRK11478	129	putative lyase; Provisional	99.92
PLN02367	233	lactoylglutathione lyase	99.91
PLN03042	185	Lactoylglutathione lyase; Provisional	99.91
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.91
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.9
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.9
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.9
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.9
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.9
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.9
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.89
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.89
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.89
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.89
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.89
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.89
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.88
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.88
PLN02300	286	lactoylglutathione lyase	99.88
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.88
PRK10291	129	glyoxalase I; Provisional	99.88
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.88
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.87
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.87
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.87
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.87
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.87
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.87
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.87
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.87
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.87
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.87
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.87
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.86
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.86
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.86
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.86
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.86
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.86
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.86
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.86
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.86
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.86
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.86
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.85
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.85
PRK06724	128	hypothetical protein; Provisional	99.85
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.85
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.84
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.84
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.84
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.84
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.84
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.83
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.83
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.83
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.83
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.83
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.83
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.83
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.82
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.82
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.82
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.82
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.82
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.81
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.81
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.81
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.8
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.79
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.79
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.79
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.78
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.76
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.74
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.74
PLN02300	286	lactoylglutathione lyase	99.72
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.72
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.69
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.64
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.59
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.54
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.52
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.47
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.41
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.41
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.35
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	99.25
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.23
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.15
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.07
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.06
PRK10148	147	hypothetical protein; Provisional	99.04
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.0
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.81
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.8
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.73
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.69
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.52
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.07
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.87
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.79
PF15067	236	FAM124: FAM124 family	97.71
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	97.3
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.83
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	96.31
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	95.89
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	95.32
PLN02367	233	lactoylglutathione lyase	95.15
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	94.78
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	94.71
PRK11478	129	putative lyase; Provisional	94.46
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	94.42
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	94.37
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	93.93
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	93.92
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	93.62
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	93.52
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	93.4
PLN03042	185	Lactoylglutathione lyase; Provisional	93.2
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	93.15
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	93.12
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	92.6
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	92.28
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	92.05
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	92.02
PRK10291	129	glyoxalase I; Provisional	91.32
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	90.79
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	90.28
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	90.2
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	89.9
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	89.38
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	88.74
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	88.46
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	88.29
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	88.29
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	88.01
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	87.63
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	87.51
PRK11700	187	hypothetical protein; Provisional	87.35
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	87.1
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	86.24
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	86.11
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	85.02
cd04883	72	ACT_AcuB C-terminal ACT domain of the Bacillus sub	84.4
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	83.09
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	82.71
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	82.61
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	81.63
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	80.62
PF07063	302	DUF1338: Domain of unknown function (DUF1338); Int	80.11

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.92  E-value=1.4e-23  Score=129.67  Aligned_cols=121  Identities=21%  Similarity=0.351  Sum_probs=90.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-----------CCCeeEEEEEe--CCeEEEEeecCCCCCCCC--
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWV--GAEMIHLMELPNPDPLSG--   79 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~--   79 (138)
                      +.+++||+|.|+|++++++||++ |||+........           ......+++..  ++..++|+....+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46799999999999999999998 999876543211           11223344543  456888887544322211  


Q ss_pred             -CCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           80 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        80 -~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                       ....+.+..|+||.|+|+++++++|+++|+++..+    .++.+.+|++||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             12334577899999999999999999999998754    3467889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.92  E-value=3.2e-23  Score=125.97  Aligned_cols=122  Identities=23%  Similarity=0.358  Sum_probs=87.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      +.+.+++||+|.|+|++++++||+++|||++...........-...+.. ++..++++..+.+...+.. ....+..|++
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~   80 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR-PEACGLRHLA   80 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC-CCCCceeEEE
Confidence            4567899999999999999999999999998643221111101112223 4456777764433221111 1234578999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |.|+|++++.++|+++|+++...    .++.+.+||+||||+.||++|
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            99999999999999999997643    346788999999999999987

>PLN02367 lactoylglutathione lyase

Probab=99.91  E-value=1e-22  Score=132.92  Aligned_cols=122  Identities=16%  Similarity=0.200  Sum_probs=93.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-------------------CeEEEEeecCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNPDP   76 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~~   76 (138)
                      -.++|++|.|+|++++++||+++|||++..+.......+..+|+..+                   +..++|....+...
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            46999999999999999999999999998876666555666776421                   24788876444331


Q ss_pred             --CCC-CC-C--CCCCccEEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEeec
Q 032542           77 --LSG-RP-E--HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        77 --~~~-~~-~--~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                        ... .. .  ...+..|++|.|+|+++++++|++.|+++...+   ...+.++++||||++|||+|..
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence              111 11 1  125789999999999999999999999987542   2245789999999999999865

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.91  E-value=1.8e-22  Score=129.02  Aligned_cols=122  Identities=17%  Similarity=0.224  Sum_probs=90.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-------------------CCeEEEEeecCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPDP   76 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~~~~   76 (138)
                      .++.|++|.|+|+++|++||+++|||++..+.......+..+++..                   ++..++|+.......
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            4699999999999999999999999999877544444344555532                   234788876443322


Q ss_pred             CC--C-C---CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCeEEEEeec
Q 032542           77 LS--G-R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        77 ~~--~-~---~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~---~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .+  . .   ...+.++.|++|.|+|+++++++|+++|+++...+   .+.+.+|++||||+.|||++..
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            11  0 1   11235789999999999999999999999987542   1346678899999999999864

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.91  E-value=2.3e-22  Score=121.18  Aligned_cols=119  Identities=26%  Similarity=0.413  Sum_probs=86.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .+++||+|.|+|++++.+||+++|||++...........-...+.. ++..++++........... ....+..|++|.|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSY-PEACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCC-CcCCCceEEEEEe
Confidence            5799999999999999999999999998764322221111122333 4557777655433221111 2335678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           95 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +|++++.++|+++|+++...    ..+.+.+|++||+|++||++|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999999999999987643    346678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.90  E-value=1.5e-22  Score=124.26  Aligned_cols=118  Identities=12%  Similarity=0.043  Sum_probs=88.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCccEEEEEEC
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR   95 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v~   95 (138)
                      ++|+.|.|+|++++++||+++|||++........  ....++..++..+.+...........  ....+.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            5899999999999999999999999887544321  23444555666666654332221100  0123456789999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+++++++|+++|+++..+    +++.+.++++||||++|||++.+
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            9999999999999998643    45668999999999999999864

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.90  E-value=2e-22  Score=121.56  Aligned_cols=117  Identities=23%  Similarity=0.317  Sum_probs=84.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      +++|+.|.|+|++++++||+++|||++.........+....|+..+ +..++++..+...... ......+..|++|.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            4789999999999999999999999976543222223345566653 4578887643322111 1223356789999996


Q ss_pred             ---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           96 ---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        96 ---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                         ++++++++|+++|+++...    ..+.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               5899999999999988653    33456678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.90  E-value=4.2e-22  Score=125.60  Aligned_cols=122  Identities=22%  Similarity=0.270  Sum_probs=88.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC----CC--------------CCCCeeEEEEEeC-CeEEEEeecCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEAR----PH--------------DKLPYRGAWLWVG-AEMIHLMELPNPDP   76 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~----~~--------------~~~~~~~~~~~~~-~~~~~l~~~~~~~~   76 (138)
                      ++++||+|.|+|+++|++||+++|||++..+.    ..              .......+++..+ +..++++....+..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            57999999999999999999999999875321    10              0111345566654 45788988765433


Q ss_pred             CCCCC-CCCCCccEEEEEECCHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEeec
Q 032542           77 LSGRP-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        77 ~~~~~-~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +...+ ..+.+..|++|.|+|++++.++|+++|++....        ..+.+.+|++|||||.|||++..
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            22211 234678999999999999999999999865322        11347899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.90  E-value=3.9e-22  Score=122.85  Aligned_cols=113  Identities=23%  Similarity=0.356  Sum_probs=87.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      ++.+++|+.|.|+|++++++||+++||+++.....      ..+++..++..+.+...+...    ......+..|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~~----~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDIP----RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCCC----CccCCCCeeEEEEE
Confidence            46789999999999999999999999999876422      346677777766664322111    11123456799999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           94 IR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++  |++++.++|+++|+++...    ..+++.+|++|||||+||+.+.
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  9999999999999987543    3477999999999999999864

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.90  E-value=3.8e-22  Score=121.76  Aligned_cols=115  Identities=17%  Similarity=0.273  Sum_probs=84.6

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCC-eeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++.+++|+.|.|+|++++++||+++||++........... ....++..++..+.+.....+        ...+..|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEE
Confidence            3678999999999999999999999999876543322111 112234445666666532211        1135789999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+  +++++.++|+++|+++..+    .+.++++||+|||||.|||.+.
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            998  7999999999999988654    2347899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.90  E-value=5.6e-22  Score=123.64  Aligned_cols=123  Identities=24%  Similarity=0.329  Sum_probs=86.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe----EEEEeecCCCCCCCCCCCCCCC
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR   86 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~   86 (138)
                      +..+.++++|+.|.|+|+++|++||+++|||++.............+++..++.    .+.+..  .....  ....+.+
T Consensus        11 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~--~~~~~~g   86 (150)
T TIGR00068        11 PKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTH--NWGTE--KYDLGNG   86 (150)
T ss_pred             cccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEee--cCCCC--cccCCCc
Confidence            445667899999999999999999999999998765432222223444544321    222221  11111  1122346


Q ss_pred             ccEEEEEECCHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCeEEEEeec
Q 032542           87 DRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~-~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..|++|.|+|++++.++|+++|+++..+    . +..+.+|++||||++|||++..
T Consensus        87 ~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        87 FGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             eeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            7899999999999999999999987543    1 2346789999999999999864

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.89  E-value=6.6e-22  Score=124.05  Aligned_cols=113  Identities=17%  Similarity=0.247  Sum_probs=85.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC---CeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      |++||+|.|+|++++++||+++|||++.....     ....+...+   +..++++......   .......++.|++|.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQP---RGRPGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCC---CCcccCCceEEEEEE
Confidence            58999999999999999999999999876543     123344433   4677777643211   111123567899999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+|   ++++.++|+++|+++..+  .+..+++||+||||+.|||++..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            997   899999999999986544  34567899999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.89  E-value=3.1e-22  Score=121.28  Aligned_cols=119  Identities=20%  Similarity=0.401  Sum_probs=87.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCccEEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI   94 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v   94 (138)
                      +++|+.|.|+|++++++||+++|||+..............+++..++..++|...........  ......+..|++|.|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            478999999999999999999999998764322222335667777777888875422221110  011245677999999


Q ss_pred             CCHHHHHHHHHHCCCeEEe--c---CCCceEEEE--ECCCCCeEEEEe
Q 032542           95 RDVSKLKMILDKAGISYTL--S---KSGRPAIFT--RDPDANALEFTQ  135 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~--~---~~~~~~~~~--~DPdG~~~e~~~  135 (138)
                      +|++++.++|+++|+++..  +   .+|.+.+++  +||||+.||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            9999999999999998864  2   234455666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.89  E-value=1.1e-21  Score=121.42  Aligned_cols=114  Identities=17%  Similarity=0.257  Sum_probs=81.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCC-CeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      +.+.+|+|++|.|+|++++.+||+++|||++......... .....|+..++. .+.......      +  .+++.|++
T Consensus         2 ~~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~------~--~~~~~Hia   72 (143)
T cd07243           2 IGAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG------P--DGKLHHFS   72 (143)
T ss_pred             CCCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC------C--CCCceEEE
Confidence            3567899999999999999999999999997654322111 113456655432 222222111      1  24578999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEe
Q 032542           92 IAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        92 ~~v~d~~~---~~~~l~~~g~~~~~~~-----~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |+|+|+++   +.++|+++|+++...+     ++++++||+|||||.|||.+
T Consensus        73 f~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          73 FFLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            99998887   5689999999886431     24678999999999999975

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.89  E-value=1.4e-21  Score=117.29  Aligned_cols=114  Identities=21%  Similarity=0.314  Sum_probs=84.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      +.|++|.|+|++++++||+++||++..............+++..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5799999999999999999999999876543332233456666543    3555543322111   11223457899999


Q ss_pred             ECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEE
Q 032542           94 IRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        94 v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~  134 (138)
                      |+|+++++++++++|+++..+   ..+++.++|+||||+++|++
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            999999999999999998765   34567889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=2.9e-21  Score=116.32  Aligned_cols=117  Identities=21%  Similarity=0.383  Sum_probs=87.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +++++|+.|.|+|++++++||+++||++.....+..    ...++..++..+.+........+ .......+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            467999999999999999999999999988754321    23456666667777654332211 1122345678999999


Q ss_pred             CC-HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           95 RD-VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d-~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++ ++++.++|+++|+++...       .++++.+|+.|||||+||+.+.
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            74 999999999999987543       1235789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.89  E-value=1.1e-21  Score=116.11  Aligned_cols=110  Identities=40%  Similarity=0.740  Sum_probs=85.3

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe-EEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      |+|++|.|+|++++++||+++||++........   ...+++..++. .+++...+.....   +...++..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987653322   13356776655 6777765443221   2233556899999999


Q ss_pred             HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEE
Q 032542           97 VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEF  133 (138)
Q Consensus        97 ~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~  133 (138)
                      ++++.++++++|+++..+   ..+.+++++.||+|+.+|+
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            999999999999998765   2467889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=7e-21  Score=115.00  Aligned_cols=113  Identities=28%  Similarity=0.371  Sum_probs=85.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      ++++|+.|.|+|++++++||.++|||++....+      ..+++..++  ..+.+...+...   .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEE
Confidence            479999999999999999999999999987632      345666654  345555433221   112233557899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+   ++++++++|+++|+++..+  ....+++|++|||||++||.+..
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEec
Confidence            97   5889999999999987644  33457899999999999998754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.88  E-value=1.8e-21  Score=118.80  Aligned_cols=110  Identities=23%  Similarity=0.385  Sum_probs=84.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC--
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--   95 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~--   95 (138)
                      |+||.|.|+|++++++||+++||+++.....      ..+++..++..+.+...+...    ......+..|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDIP----RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCCC----cCCcCccceEEEEEecHH
Confidence            5899999999999999999999999876432      234566677777665433211    1112345789999998  


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+++++++|++.|+++..+    .++++.+||.|||||+||+.+.+
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            5999999999999987543    34678999999999999999764

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PLN02300 lactoylglutathione lyase

Probab=99.88  E-value=3.6e-21  Score=131.38  Aligned_cols=121  Identities=25%  Similarity=0.325  Sum_probs=88.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--e--EEEEeecCCCCCCCCCCCCCCCcc
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +.+.++.|++|.|+|++++++||+++|||++.............+|+..++  .  .+.+...  ...  .....+.+..
T Consensus        20 ~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~--~~~--~~~~~~~g~~   95 (286)
T PLN02300         20 KDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN--YGV--DKYDIGTGFG   95 (286)
T ss_pred             cccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc--CCC--CccccCCCcc
Confidence            568899999999999999999999999999876543233333456665542  2  2333221  111  1112345678


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCeEEEEeec
Q 032542           89 HTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        89 hi~~~v~d~~~~~~~l~~~g~~~~~~----~-~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |++|.|+|++++.++|++.|+++...    + ++.+.+|++||||+.|||++..
T Consensus        96 hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         96 HFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             EEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            99999999999999999999987643    2 2346789999999999999864

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.88  E-value=5.2e-21  Score=115.00  Aligned_cols=113  Identities=14%  Similarity=0.134  Sum_probs=76.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      ++.++.|.|+|+++|++||+++||+++....+  .    ...+. ++..+.+...............+....|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE-GGFALQEGYSWLEGISKADIIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe-ccceeccchhhhccCCcccccccCCceEEEEEehh
Confidence            68899999999999999999999999865332  1    11121 22222221110000000111123345799999999


Q ss_pred             HHHHHHHHHHCCC-eEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           97 VSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        97 ~~~~~~~l~~~g~-~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++++++|+++|+ ++..+    ++|.+.++|+|||||+|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999975 55432    5677999999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=99.88  E-value=3.2e-21  Score=117.34  Aligned_cols=112  Identities=23%  Similarity=0.368  Sum_probs=79.6

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe----EEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           22 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        22 ~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      +|.|+|++++++||+++|||++..........+..+++..++.    .+++.....  .  .....+.+..|++|.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~--~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG--V--DKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCC--C--CCCcCCCCeeEEEEEeCCH
Confidence            4789999999999999999998765544444445666655431    233332111  1  1112335678999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCC-ceEEEEECCCCCeEEEEeec
Q 032542           98 SKLKMILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~----~~~-~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +++.++|+++|+++..+    .++ .+.++++||||+.|||++..
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~  121 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  121 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcc
Confidence            99999999999987643    233 35678899999999999854

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.88  E-value=6.4e-21  Score=120.66  Aligned_cols=118  Identities=22%  Similarity=0.356  Sum_probs=83.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |.+.+++|+.|.|+|++++++||+++|||++.............+|+..++....+.......      ...+++.|++|
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~------~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPA------GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCC------CCCCCceEEEE
Confidence            678899999999999999999999999999876533222222456776643322222111111      11245789999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~d---~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+|   +++++++|+++|+++...     .....++|++|||||+||+.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9985   557789999999987532     1233468999999999999876

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.87  E-value=5.8e-21  Score=114.93  Aligned_cols=111  Identities=20%  Similarity=0.269  Sum_probs=82.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-eEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      |.+.+++|+.|.|+|++++++||+++||+++....+      ..+++...+ ...+.+.....        ...++.|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~--------~~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES--------PEAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC--------CCCceEEEE
Confidence            457799999999999999999999999999877533      235565422 11111111111        124578999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |.|+   +++++.++++++|+++.+.   ++.++++|++|||||.+|+....
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence            9997   5888899999999987532   45677899999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=2.3e-20  Score=112.43  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=83.8

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHH
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  100 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~  100 (138)
                      -.|.|+|++++++||+++||+++....+........+.+..++..+.+.................+..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            35889999999999999999999875432222223445666776666654432221110112234457999999999999


Q ss_pred             HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542          101 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus       101 ~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++++++|+++..+    ++|.+.++++|||||+|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            99999999988743    4577899999999999999763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.87  E-value=1.7e-20  Score=113.47  Aligned_cols=109  Identities=19%  Similarity=0.295  Sum_probs=81.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      .++.++.|+.|.|+|++++.+||+++|||++.....      ..+|+..++....+. .....         ++..|++|
T Consensus         2 ~~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~-l~~~~---------~~~~~iaf   65 (124)
T cd08361           2 IELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLV-YIEGD---------PAEQASGF   65 (124)
T ss_pred             ceEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEE-EEeCC---------CceEEEEE
Confidence            357889999999999999999999999999876432      246676653222222 11111         22478999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIRD---VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~d---~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|++   ++++.++++++|+++..+       +.+.+++||+|||||.||+...+
T Consensus        66 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          66 ELRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             EECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            9975   999999999999988653       23466789999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.87  E-value=1.3e-20  Score=112.16  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=80.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.+++|+.|.|+|++++++||++ |||+......      ..+|+..++....+.......        ..+..|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKGE--------KARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccCC--------cCcccEEEEEE
Confidence            46799999999999999999999 9998865432      245666543322332222111        14568999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEe
Q 032542           95 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +|.+++.+.+++.|......   +++++.++|.|||||.||++.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999876543   456789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.87  E-value=2e-20  Score=111.31  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=82.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-eEEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      +.|++|.|+|++++++||+++||+++..... ..  ...+++..++ ....++......      ...+...|++|.++|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCC
Confidence            4799999999999999999999999876543 11  1345566554 345555443221      112445799999999


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           97 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        97 ~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++++.++|+++|+++..+    +++++.++++|||||.|+++|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            999999999999988644    347789999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=1.8e-20  Score=111.85  Aligned_cols=113  Identities=21%  Similarity=0.300  Sum_probs=81.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC---CeEEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      |+.|.|+|++++++||+++|||++........ ......+..+   +..+.+........  ......++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAA--MSGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccc--cccccCCCceEEEEEehH
Confidence            78999999999999999999999987654211 1223333332   23444443322211  122234567799999999


Q ss_pred             HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEe
Q 032542           97 VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        97 ~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++++.++++++|+++..+   ..+++.++++||+||+|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            999999999999988754   345689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.87  E-value=1.6e-20  Score=112.95  Aligned_cols=106  Identities=18%  Similarity=0.233  Sum_probs=79.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC-
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   95 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~-   95 (138)
                      +++|++|.|+|+++|++||+++|||++......     ..+|+..++..+.+.-.+..         ..+..|++|.++ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-----GALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-----CeEEEEccCCceEEEEEeCC---------CCceeEEEEEECC
Confidence            689999999999999999999999998654221     24566665443333322211         134679999997 


Q ss_pred             --CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           96 --DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        96 --d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                        |++++.++|+++|+++...       +++++.+|++|||||.||++..
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence              5888899999999998753       2345789999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.87  E-value=4e-21  Score=120.12  Aligned_cols=114  Identities=14%  Similarity=0.128  Sum_probs=80.0

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-CCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      +++||+|.|+|++++++||+++||+++....... ......+|+..++.  .+......-..      ..+.++.|+||.
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~~~~g~~Hiaf~   74 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ------GPESGVHHAAFE   74 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc------CCCCceeEEEEE
Confidence            4799999999999999999999999987543221 12235667766432  11110000000      113668999999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEee
Q 032542           94 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~d~~~~~---~~l~~~g~~~~~~~-----~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+|++++.   ++|+++|+++.++.     +...++|++|||||+|||...
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~  125 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTD  125 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcC
Confidence            99999986   99999999987641     224467999999999999853

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.87  E-value=1.6e-20  Score=113.10  Aligned_cols=108  Identities=17%  Similarity=0.219  Sum_probs=79.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-C-eEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      +++++|+.|.|+|++++++||+++|||++....+.     ..+++... + ....+. ....        ...+..|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~-l~~~--------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIV-LREA--------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEE-eccC--------CCCCeeEEEE
Confidence            56899999999999999999999999998765321     12445432 1 111121 1111        1234689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+   +++++.++|+++|+++...     +..++.+||+|||||.||+.+.
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            997   7899999999999988643     2346789999999999999875

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.87  E-value=3.2e-20  Score=112.59  Aligned_cols=114  Identities=25%  Similarity=0.345  Sum_probs=85.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhh---CCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~l---g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      +++||.|.|+|++++++||+++|   ||+.......     ...|... ++..+.++........ .......+..|++|
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-----~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-----GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-----CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            58999999999999999999999   9998875421     2244443 5667777765443221 11123455789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+   |++++.++|+++|+++...       ..+.+.+|++||||+++||+.+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   5889999999999998654       2356799999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.87  E-value=2.8e-20  Score=112.26  Aligned_cols=106  Identities=21%  Similarity=0.305  Sum_probs=80.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .++.|+.|.|+|+++|++||+++||++......      ..+++..+ +..+.+....  .        ..+..|++|.+
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~--~--------~~~~~h~a~~v   66 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPD--G--------EIPPQHYAFLV   66 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCC--C--------CCCcceEEEEe
Confidence            579999999999999999999999999876322      12333433 3345544321  1        12357999988


Q ss_pred             C--CHHHHHHHHHHCCCeEEec-----------CCCceEEEEECCCCCeEEEEeec
Q 032542           95 R--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~--d~~~~~~~l~~~g~~~~~~-----------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +  |++++.++|+++|+++...           .++++.+||+|||||.||+++.+
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            7  6999999999999987432           35779999999999999999874

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.86  E-value=1.3e-20  Score=113.68  Aligned_cols=116  Identities=21%  Similarity=0.406  Sum_probs=83.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCC-CeeEEEEEe----CCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~-~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      +++||+|.|+|++++++||+++|||+.......... .....++..    ++..++|+..+.....  ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            478999999999999999999999998766442221 112233332    2446777765433211  112234578999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEE
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~  134 (138)
                      |.|+   +++++.++++++|+++..+  ..+++.+|++||+||+|||+
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   5799999999999987643  45778999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.86  E-value=2.2e-20  Score=111.46  Aligned_cols=106  Identities=21%  Similarity=0.292  Sum_probs=82.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ++++|+.|.|+|++++++||+++|||++....+      ..+|+..+ +....+.....+         ..+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEc
Confidence            469999999999999999999999999887643      34667765 333333322211         13468999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           95 R---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +   +++++.++++++|+++...    +++++.+++.||+||.+|+...
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            7   6888999999999998654    4467899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.86  E-value=1.8e-20  Score=112.88  Aligned_cols=107  Identities=26%  Similarity=0.410  Sum_probs=81.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE--
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--   94 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v--   94 (138)
                      +++|+.|.|+|++++++||+++||+++....+      ...++..++..+.+......       ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-------~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANV-------GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCC-------CCCCCeeeEEEEeCH
Confidence            58899999999999999999999999876543      23556666655555322211       0124568999999  


Q ss_pred             CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEee
Q 032542           95 RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|+++++++++++|+++..+ ...++.+||.|||||.|||.+.
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence            48999999999999987544 3356899999999999999864

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.86  E-value=7.1e-20  Score=111.96  Aligned_cols=113  Identities=25%  Similarity=0.370  Sum_probs=83.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC---CeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      +|+|+.|.|+|++++++||+++|||++......    ....++..+   ...+.++.......    .....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            489999999999999999999999998765432    134555544   23566554332211    1223567899999


Q ss_pred             ECCHH---HHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IRDVS---KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~d~~---~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+|++   +++++|.+.|+++...  .++++.++++||+||.|||++..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            98765   5789999999987654  44578999999999999999754

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.86  E-value=2.7e-20  Score=111.71  Aligned_cols=108  Identities=21%  Similarity=0.311  Sum_probs=81.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.+|+|+.|.|+|++++++||+++|||+......      ..+++..++....++......        ..+..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSD--------RNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCC--------CCCCceEEEEe
Confidence            3589999999999999999999999999875433      235565443333333322211        12357999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCeEEEEee
Q 032542           95 R---DVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +   +++++.+++++.|+++..+      +++++.+++.||+||.+|+++.
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence            4   7899999999999988643      3357889999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.86  E-value=1.9e-20  Score=113.30  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=88.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-CCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCccEEEEEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI   94 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~v   94 (138)
                      ++||.|.|+|++++++||+++|||+........ ......+++..++..+.++..........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            579999999999999999999999998765432 22334677777788888886543322111  112346678999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCC---CCeEEEEe
Q 032542           95 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPD---ANALEFTQ  135 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPd---G~~~e~~~  135 (138)
                      +|++++.++++++|+++..+    ..+++.+++.||+   |+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            99999999999999998654    2345566666665   99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.86  E-value=2.1e-20  Score=111.01  Aligned_cols=106  Identities=23%  Similarity=0.392  Sum_probs=80.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC--CH
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV   97 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~--d~   97 (138)
                      |+.|.|+|++++++||+++||++......      ...++..++..+.+.......      ....+..|++|.|+  ++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~------~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQ------GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcC------CCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999876543      235566666555543322111      11245689999995  79


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           98 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++++++++++|+++...    ..+++.+|++|||||+||+.+.+
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~  112 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAGT  112 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeCc
Confidence            99999999999998643    23678999999999999998643

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=5.1e-20  Score=110.35  Aligned_cols=110  Identities=16%  Similarity=0.198  Sum_probs=77.9

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      +..|.|+|++++++||+++|||+.....+      ....+..++  ..+.+................+...|++|.|+|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   77 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDV   77 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCH
Confidence            46799999999999999999999886522      234454443  3444443322211101111122335999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           98 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +++.++++++|+++..+    +++.+.++++||+|++|||+|
T Consensus        78 d~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          78 DAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            99999999999987543    456789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=6.5e-20  Score=110.69  Aligned_cols=115  Identities=17%  Similarity=0.197  Sum_probs=80.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCC-----CC-CCCCCCCCCccEEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-----PL-SGRPEHGGRDRHTC   91 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~-~~~~~~~~~~~hi~   91 (138)
                      +.|+.|.|+|++++++||+++|||+.......+    ....+..++..+.+.......     .. +..+...++..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            468999999999999999999999986533211    112233345555454322110     00 01111223346899


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |.|+|+++++++++++|+++..+    ++|.+.++++|||||.||+.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999999987543    4577889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=1.3e-19  Score=108.85  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=83.6

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHH
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  100 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~  100 (138)
                      ..|.|+|++++++||+++||+++.............+.+..++..+.+........  .......+..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            45889999999999999999998876542232234455666777777664322111  1112234567999999999999


Q ss_pred             HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542          101 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus       101 ~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++++.+.|+++..+    .++.+.++++||||+.|+|.+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999987543    557789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.86  E-value=6.8e-20  Score=112.20  Aligned_cols=107  Identities=20%  Similarity=0.334  Sum_probs=79.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      .+++|+.|.|+|++++++||+++||+++.....  .   ..+|+..++    ..+.+...+.         ...++.|++
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC---------CCCcceEEE
Confidence            479999999999999999999999999876432  1   345666642    1333332211         125688999


Q ss_pred             EEECCHHHHH---HHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAIRDVSKLK---MILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~d~~~~~---~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |.|+|++++.   ++|+++|+++...     ..+.+++|++||+|+.||+...
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            9999888776   5999999987643     1234568999999999999853

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.85  E-value=3.7e-20  Score=115.89  Aligned_cols=112  Identities=17%  Similarity=0.286  Sum_probs=81.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC---CCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      .++|+||.|.|+|++++++||+++|||++.......   ......+|++.++.  .+.+....          ...++.|
T Consensus         7 ~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~----------~~~g~~H   76 (154)
T cd07237           7 DQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP----------GPKRIHH   76 (154)
T ss_pred             CCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC----------CCceeEE
Confidence            357999999999999999999999999986532211   11234566666432  23332111          1255789


Q ss_pred             EEEEECCHH---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRDVS---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d~~---~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+|++   ++.++|+++|+++..+     ..+.+++|++||+|+.|||...
T Consensus        77 iaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          77 LMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            999998655   5799999999998654     2356889999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.85  E-value=2.4e-21  Score=117.01  Aligned_cols=117  Identities=25%  Similarity=0.430  Sum_probs=83.8

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC--CCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCC-CCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~hi~~~   93 (138)
                      ||+||+|.|+|++++++||+++|||++.....  .........++..++..+.+.....+........ ...+..|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999988755  1222334566777777777766554433221110 00135677777


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEE
Q 032542           94 IR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEF  133 (138)
Q Consensus        94 v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~  133 (138)
                      +.   |++++.++|++.|+++..+     ......+|++||+|+.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76   6778899999999988654     2344556899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PRK06724 hypothetical protein; Provisional

Probab=99.85  E-value=6.4e-20  Score=111.40  Aligned_cols=108  Identities=22%  Similarity=0.279  Sum_probs=75.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhh---CCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      ++.+++||.|.|+|+++|++||+++|   |++....         .. +..+...+.+.......      ....+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~~-~~~g~~~l~l~~~~~~~------~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------VA-YSTGESEIYFKEVDEEI------VRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------Ee-eeCCCeeEEEecCCccc------cCCCCceeE
Confidence            34579999999999999999999977   5554311         01 11233344443322110      112356899


Q ss_pred             EEEE---CCHHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCeEEEEeec
Q 032542           91 CIAI---RDVSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v---~d~~~~~~~l~~~g~~~~~~----~---~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ||.|   ++++++.++|+++|+++..+    +   ++.++++|+|||||.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   58999999999999988533    1   3457899999999999998653

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.85  E-value=1.2e-19  Score=114.41  Aligned_cols=112  Identities=21%  Similarity=0.320  Sum_probs=76.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      ++|+||+|.|+|++++++||+++|||++..............|+..++....+.....         .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~---------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG---------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC---------CCCceeEEEEEcC
Confidence            5799999999999999999999999998654322122223345544322111111111         1245789999998


Q ss_pred             C---HHHHHHHHHHCCCeE--Eec-----CCCceEEEEECCCCCeEEEEee
Q 032542           96 D---VSKLKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        96 d---~~~~~~~l~~~g~~~--~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |   ++++.++|+++|+..  ...     ..+.+++|++|||||.||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   777889999999863  211     1234679999999999999863

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.84  E-value=1.5e-19  Score=111.90  Aligned_cols=105  Identities=16%  Similarity=0.325  Sum_probs=78.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      .+++|+.|.|+|++++++||+++|||++.....  .   ..+|+..++.  .+.+..   ..        .++..|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~~~~l~~---~~--------~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHHSIAIAR---GP--------HPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcceEEEcc---CC--------CCceEEEEEE
Confidence            479999999999999999999999999865422  1   3456666543  233321   11        2457899999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           94 IRDVSKLK---MILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~d~~~~~---~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+|++++.   ++|+++|+++...     .++.+.+||+||+||.|||++.
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~  117 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSE  117 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccC
Confidence            99888775   8999999988643     2235678999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.84  E-value=1.3e-19  Score=108.89  Aligned_cols=107  Identities=23%  Similarity=0.306  Sum_probs=79.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++++.|+.|.|+|++++++||+++||+++.....      ..+++...  .....+......         ..+..|++|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~hi~~   66 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKAP---------VAGLGHIAF   66 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeCC---------CCceeEEEE
Confidence            5689999999999999999999999999876532      23455431  122222211111         134689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|.   +++++.++++++|+++...     ++.++++|+.|||||.||++..
T Consensus        67 ~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          67 RVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             ECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            994   7889999999999988542     3345899999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.84  E-value=3.6e-19  Score=106.97  Aligned_cols=114  Identities=26%  Similarity=0.500  Sum_probs=83.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-eEEEEeecCCCCCCC--CCCCCCCCccEEEEEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLS--GRPEHGGRDRHTCIAI   94 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~--~~~~~~~~~~hi~~~v   94 (138)
                      +.++.|.|+|++++++||+++|||++..... +    ..+++..++ ..+.++.........  .......+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~~-~----~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKED-R----RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecCC-C----ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            3588999999999999999999999887421 1    345666665 455555433221100  0111234578999999


Q ss_pred             C--CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEee
Q 032542           95 R--DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~--d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +  |++++++++.++|+++...   .++++.++++||+|++||+++.
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            5  8999999999999987654   4577899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.84  E-value=4.1e-19  Score=108.32  Aligned_cols=108  Identities=19%  Similarity=0.324  Sum_probs=80.0

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      +||.|.|+|++++++||+++||+++....... .....+|+..++.  .+.+...  ..        ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~--------~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPG--PE--------RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcC--CC--------CCCeeEEEEEcCC
Confidence            59999999999999999999999987654322 2224567776543  3333321  11        2457899999997


Q ss_pred             HH---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEeec
Q 032542           97 VS---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        97 ~~---~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++   ++.++|+++|+++...     .++.++++++||||+.|||.+..
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            65   6789999999988643     23467899999999999998753

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.84  E-value=3.5e-19  Score=107.02  Aligned_cols=103  Identities=25%  Similarity=0.381  Sum_probs=78.8

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHH
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  100 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~  100 (138)
                      ..|.|+|+++|++||++ |||+.....+.     ..+++..++..++|+......+       .....|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-------ATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-------CCCcceEEEEeCCHHHH
Confidence            56899999999999999 99998765432     2455666777788875432111       11235799999999999


Q ss_pred             HHHHHHCCCeEE--------ec---CCCceEEEEECCCCCeEEEEee
Q 032542          101 KMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus       101 ~~~l~~~g~~~~--------~~---~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++|+++|+++.        .+   +++.+.++++|||||.|||.|.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            999999999742        22   3688999999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.83  E-value=6.5e-19  Score=104.29  Aligned_cols=105  Identities=30%  Similarity=0.470  Sum_probs=80.0

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHHH
Q 032542           22 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  101 (138)
Q Consensus        22 ~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~  101 (138)
                      .|.|+|++++++||+++|||+.......    ...+++..++..+.+.........     ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHPE----PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcCC----CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            5899999999999999999998775431    134556667777777654432211     2234568999999999999


Q ss_pred             HHHHHCCCe-EEec----CCCceEEEEECCCCCeEEEEe
Q 032542          102 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus       102 ~~l~~~g~~-~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +++++.|++ +..+    .++.+.++++||+|+.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 3322    446689999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=6e-19  Score=106.40  Aligned_cols=111  Identities=22%  Similarity=0.294  Sum_probs=74.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCC---CCCCCCCCCccEEEE--EE
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL---SGRPEHGGRDRHTCI--AI   94 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~hi~~--~v   94 (138)
                      ||.|.|+|++++++||+++||+++.....      ....+..++..+.+.........   ........+..|+++  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            89999999999999999999999865422      12223334444444332221110   001111223467755  55


Q ss_pred             CCHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEee
Q 032542           95 RDVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|+++++++|+++|+++..+        +++++.+|++|||||.|||.++
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            79999999999999988642        2346899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=1.1e-18  Score=103.78  Aligned_cols=106  Identities=22%  Similarity=0.261  Sum_probs=77.8

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECC---
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---   96 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d---   96 (138)
                      +.|.|+|+++|++||+++||+++....+      ..+.+.. ++..+.++.......   .+....+..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            5789999999999999999999776432      2233444 456777765433221   11123456899999985   


Q ss_pred             HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEe
Q 032542           97 VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        97 ~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +++++++++++|+++..+   .+.++.++|+|||||+||+++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            888999999999988754   334578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=5.8e-19  Score=106.63  Aligned_cols=113  Identities=18%  Similarity=0.145  Sum_probs=77.0

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCC---CCCCCCCCCCCccEEEEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPD---PLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~hi~~~   93 (138)
                      +.++.|.|+|++++++||++ |||+.........    ..++..+ +..+.+.......   ..........+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            35789999999999999987 9999775433222    2334343 4566665432110   000000122345699999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEe
Q 032542           94 IR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        94 v~---d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |+   ++++++++++++|+++..+   .++.+.+|++|||||+||++.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   5888999999999988643   334578999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.83  E-value=8.7e-19  Score=105.45  Aligned_cols=112  Identities=21%  Similarity=0.310  Sum_probs=76.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCC-CCCCCCCCCCccEEEEEEC
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~~~~~~~~~~~~hi~~~v~   95 (138)
                      |+||+|.|+|+++|++||+. |||++.......    ..+.+..+ +..+.+........ .+..+....+..|++|.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADDE----PHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCCC----CcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            57999999999999999975 999986543211    22344444 45555533221110 0111112234568889875


Q ss_pred             ---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           96 ---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        96 ---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                         |+++++++|+++|+++..+    +++.+.++++|||||.|||+
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence               8999999999999976543    45778899999999999997

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=1.7e-18  Score=104.49  Aligned_cols=110  Identities=15%  Similarity=0.180  Sum_probs=75.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-----------CCeeEEEEEeC----CeEEEEeecCCCCCCCCCC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVG----AEMIHLMELPNPDPLSGRP   81 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~   81 (138)
                      ++.|++|.|+|+++|++||+++|||++..+...+.           .....+++..+    +..++|....+..+    .
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            58999999999999999999999999876443222           11112334332    23566654332211    1


Q ss_pred             CCCCCccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           82 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        82 ~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ..+.+  |++|.|++. ++.++|+++|+++...+.+  .++++||||+.|||+.
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            22222  677777777 5569999999988876543  8899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=1.6e-18  Score=104.04  Aligned_cols=107  Identities=23%  Similarity=0.413  Sum_probs=76.8

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECC--
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--   96 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d--   96 (138)
                      .|+.|.|+|++++++||+++||++.....+  .   ... +..++..+.+........    .  ..+..|++|.+++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~-~~~~~~~~~~~~~~~~~~----~--~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAK-FLLEDPRLNFVLNERPGA----P--GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeE-EEecCCceEEEEecCCCC----C--CCCeeEEEEEeCCHH
Confidence            589999999999999999999998766532  1   122 333333344432222111    0  1457899999987  


Q ss_pred             -HHHHHHHHHHCCCeEEecC------CCceEEEEECCCCCeEEEEeec
Q 032542           97 -VSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        97 -~~~~~~~l~~~g~~~~~~~------~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                       ++++.+++.++|+++...+      ...+.+|++||+||.|||.+..
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             7889999999999986541      1356899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.82  E-value=7.8e-19  Score=103.42  Aligned_cols=100  Identities=27%  Similarity=0.505  Sum_probs=72.6

Q ss_pred             EEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHH
Q 032542           23 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   98 (138)
Q Consensus        23 l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~   98 (138)
                      |.|+|++++++||+++|||++....+      ..+.+..+.    ....+...+...      ....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDPP------GPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESSS------SSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCccc------cCCCceeEEEEEEcCHH
Confidence            68999999999999999999998433      223344332    123333332211      12355689999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           99 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        99 ~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                      ++++++++.|+++..+    .++.+.+++.|||||+|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997543    56779999999999999986

...

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=7.4e-19  Score=104.65  Aligned_cols=100  Identities=18%  Similarity=0.216  Sum_probs=75.8

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHH
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  100 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~  100 (138)
                      ..|.|+|++++++||++ |||++....+      ..+++..++..+.+.......        .....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~--------~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKD--------WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCcc--------cccCCEEEEEECCHHHH
Confidence            35789999999999988 9999987532      346777777766654321111        12235799999999999


Q ss_pred             HHHHHHCCCeEE---------ecCCCceEEEEECCCCCeEEEEe
Q 032542          101 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus       101 ~~~l~~~g~~~~---------~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +++|+++|+++.         ...+|.+.++++|||||+|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998642         11568899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.82  E-value=2.2e-18  Score=102.28  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=74.2

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC---CeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      ..|.|+|++++++||+++|||+......      ..+++..+   +..+.+......         +....|++|.|+|+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d~   68 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDHG------WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDDV   68 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcCC------ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCCH
Confidence            3588999999999999999999865311      22334432   233444322111         12246999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           98 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++.++|++.|+++..+    .+|.+.+++.||+||.|+++++
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            99999999999987653    4466899999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.82  E-value=1e-18  Score=120.24  Aligned_cols=117  Identities=20%  Similarity=0.304  Sum_probs=80.2

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCe-eEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccE
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      +.+.+++++||+|.|+|++++++||+++|||+............ ...|+..++. .+.+.....       ...+.++|
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~g~~~H  210 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-AHDIAFVGD-------PEPGKLHH  210 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-CcccceecC-------CCCCceEE
Confidence            44678899999999999999999999999999865432222111 2345544321 111111000       01234789


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEe
Q 032542           90 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        90 i~~~v~d---~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +||.|+|   ++++.++|+++|+++..++     ..++++||+|||||+||+.+
T Consensus       211 iaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       211 VSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            9999996   5557789999999986531     13578999999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.82  E-value=1.2e-18  Score=107.41  Aligned_cols=104  Identities=17%  Similarity=0.241  Sum_probs=76.9

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-eEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      .||.|.|+|++++++||.++|||++......     ..+|++..+ ...+......        ....+++|++|.|+|+
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~--------~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP--------ASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc--------CCCCceEEEEEECCCH
Confidence            4899999999999999999999998765321     456776532 2222222111        1235789999999865


Q ss_pred             ---HHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEe
Q 032542           98 ---SKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        98 ---~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                         +++.++|+++|+++..+     ..+.+.+|++||+|+.||+..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence               56799999999988643     245678999999999999975

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.81  E-value=2e-18  Score=101.26  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=85.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHH
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK   99 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~   99 (138)
                      |+.+.|+|++++.+||+++||++.......  .....+++..++..+++....+....    ....+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            789999999999999999999998876542  11245566666677888766543221    234557899999999999


Q ss_pred             HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEE
Q 032542          100 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF  133 (138)
Q Consensus       100 ~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~  133 (138)
                      +.++|+++|+.+..+    ..+.+.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            999999999988654    3567899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.81  E-value=3.5e-18  Score=101.50  Aligned_cols=101  Identities=26%  Similarity=0.413  Sum_probs=71.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCe--EEEEeecCCCCCCCCCCCCCCCccEE--E
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRHT--C   91 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi--~   91 (138)
                      +|+||.|.|+|++++++||+ .|||++....+       ..++.. ++.  .+.+..  ..         .....|+  .
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~   62 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD-------GLELRTAGNDHRWARLLE--GA---------RKRLAYLSFG   62 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC-------ceEEEecCCCceEEEeec--CC---------CCceeeEEEE
Confidence            68999999999999999997 69999875421       122333 222  222221  11         1223444  4


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +.++|++++.++|+++|+++...  ..+.+.+||.|||||.|||...
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            44579999999999999988644  4456789999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=3.1e-18  Score=103.16  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=75.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHh---hCCeeeccCCCCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           18 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~---lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++|++|.|+|++++++||+++   ||++......  .   ..+++..+  +..+.+.......     +....+..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEE
Confidence            579999999999999999998   6898775431  1   12333332  3466665432211     111233479999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCeEEEEe
Q 032542           93 AIRD---VSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        93 ~v~d---~~~~~~~l~~~g~~~~~~----~---~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .|++   ++++.++++++|+++...    .   .+.+++|++|||||.|||+.
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            9986   788899999999987543    1   23457899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=5.4e-18  Score=101.62  Aligned_cols=110  Identities=20%  Similarity=0.261  Sum_probs=78.5

Q ss_pred             EEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCC--CCCCCccEEEEEE---C
Q 032542           21 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R   95 (138)
Q Consensus        21 i~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~hi~~~v---~   95 (138)
                      |.|.|+|++++.+||+++|||++..... .    ..+++..++..+.++..+........+  ..+.+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~~-~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADSN-D----GVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccCC-C----ceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            6799999999999999999999876511 1    345666677777777543221111111  1222334566665   5


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |++++++++++.|+++..+    +++++.++++||+||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            8999999999999998654    346789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.79  E-value=4.8e-18  Score=116.04  Aligned_cols=108  Identities=20%  Similarity=0.275  Sum_probs=80.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.+++|+.|.|+|+++|++||+++|||+......  .   ...|++.++....+.......         .+..|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            4689999999999999999999999998765322  1   234556653322232222111         2357899999


Q ss_pred             CC---HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           95 RD---VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d---~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++   ++++.++|+++|+++...       .++++.++|.|||||.+|++..
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence            97   888999999999988653       3456889999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.79  E-value=7.1e-18  Score=115.57  Aligned_cols=115  Identities=28%  Similarity=0.423  Sum_probs=79.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +.+.+++++||+|.|+|++++++||+++||+++..............|+..++.  .+.+.   .        ..+.+++
T Consensus       130 ~~~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~  198 (294)
T TIGR02295       130 RGVSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALT---N--------GNGPRLH  198 (294)
T ss_pred             CCccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEee---c--------CCCCcee
Confidence            446788999999999999999999999999998765332222222344443221  12211   1        1125688


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCe--EEecC-----CCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRD---VSKLKMILDKAGIS--YTLSK-----SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d---~~~~~~~l~~~g~~--~~~~~-----~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+||+|+|   ++++.++|++.|++  +...+     ...+++|++||+|++||+.+.
T Consensus       199 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       199 HIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             eEEEEcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            99999998   55568999999987  43221     134679999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.79  E-value=8.9e-18  Score=114.73  Aligned_cols=113  Identities=15%  Similarity=0.257  Sum_probs=79.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC--C-CCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH--D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      +.+|+||+|.|+|++++.+||.++|||++......  . ......+|+..++....+.....+        ...+++|++
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            56899999999999999999999999998654211  1 111235667664332222111111        125588999


Q ss_pred             EEECCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           92 IAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        92 ~~v~d~~~---~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |+|+|.++   +.++|+++|+....+    .++.+++|++||+|++||+.+
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99998776   799999999933222    235678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.78  E-value=1.1e-17  Score=114.67  Aligned_cols=107  Identities=21%  Similarity=0.273  Sum_probs=80.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-C-eEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      +.+++|+.|.|+|++++++||+++|||++.....      ..+++... . ....+......         ..+..|++|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~~---------~~~~~hiaf   66 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP---------SAALSYIGF   66 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeCC---------CcCccEEEE
Confidence            5789999999999999999999999999876532      23455432 1 11122211111         134789999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+   |++++.++|+++|+++...  +.+.+.+||+|||||.|||++.
T Consensus        67 ~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        67 RVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            997   7889999999999988754  4456899999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.76  E-value=3.9e-17  Score=112.40  Aligned_cols=105  Identities=20%  Similarity=0.265  Sum_probs=78.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CC---eEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      +++++|+.|.|+|++++++||+++|||++.....      ..+++.. ++   ..+.+.  ..         ...++.|+
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~~~~~l~--~~---------~~~g~~hi   64 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG------QRVYLKAWDEWDHYSVILT--EA---------DTAGLDHM   64 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC------ceEEEEeccccccceEeec--cC---------CCCceeEE
Confidence            5689999999999999999999999999876533      1234443 11   122221  11         12357899


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           91 CIAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        91 ~~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|.|+   +++++.++|+++|+++...     .+.++.+||+||||+.|||.+.
T Consensus        65 af~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        65 AFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            99998   7889999999999988643     2356889999999999999974

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.74  E-value=1.9e-17  Score=97.97  Aligned_cols=94  Identities=26%  Similarity=0.393  Sum_probs=76.0

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEEEEEECC
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD   96 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d   96 (138)
                      +||+|.|+|+++|++||+++||+.............+.+++..++  ..++|++.......  ....+.+++|+||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~--~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSP--LDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCH--HHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcc--cccCCCCEEEEEEEeCC
Confidence            699999999999999999999999876655556666788888876  58999986654421  11266889999999999


Q ss_pred             HHHHHHHHHHCCCeEEec
Q 032542           97 VSKLKMILDKAGISYTLS  114 (138)
Q Consensus        97 ~~~~~~~l~~~g~~~~~~  114 (138)
                      +++..++|+++|+++...
T Consensus        79 ~d~~~~~l~~~G~~~~~~   96 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDE   96 (109)
T ss_dssp             HHHHHHHHHHTTECEEEC
T ss_pred             HHHHHHHHHHCCCEEccc
Confidence            999999999999997643

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.74  E-value=2e-16  Score=104.05  Aligned_cols=114  Identities=25%  Similarity=0.378  Sum_probs=88.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe-EEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.+..+.|.|+|++.++.||++++|+++..+..      ..+-+..++. .+.|.+.+....   .+....++.|++|-+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~---~~~~~aGLyH~AfLl   79 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARR---PPPRAAGLYHTAFLL   79 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCC---CCccccceeeeeeec
Confidence            448999999999999999999999999998755      3344666665 445554444332   224557889999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeecC
Q 032542           95 R---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      +   |+..+..++...|+.+...  ......+||.||+||-||++...|
T Consensus        80 P~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          80 PTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEecCC
Confidence            8   5777789999999998632  567789999999999999987643

>PLN02300 lactoylglutathione lyase

Probab=99.72  E-value=4.1e-16  Score=106.61  Aligned_cols=119  Identities=19%  Similarity=0.217  Sum_probs=85.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      ...+.|+.|.|+|++++.+||+++|||+...........+..+++..++    ..+++....+.    ..+..+.+..|+
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i  227 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQI  227 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEE
Confidence            4568999999999999999999999999875433223334445554322    13343321111    112234667799


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec----CC-CceEEEEECCCCCeEEEEeec
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~----~~-~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|.|+|++++.++++++|+++..+    ++ +++.++|.||||+.++|++..
T Consensus       228 ~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        228 AIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            999999999999999999988653    22 247899999999999999754

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.72  E-value=5.1e-16  Score=94.22  Aligned_cols=123  Identities=16%  Similarity=0.263  Sum_probs=80.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeee--------------------ccCCCCCCCeeEEEEEeCCeEEEEeecC
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEIN--------------------EARPHDKLPYRGAWLWVGAEMIHLMELP   72 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~   72 (138)
                      +....+.|.++++.|+.++..||.+++|+.+.                    ...+....+ ..+|+......+++....
T Consensus        18 ~~t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~-~~v~~~~~~~~~ELthn~   96 (170)
T KOG2944|consen   18 TPTYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHG-VSVFVFSRNAKLELTHNW   96 (170)
T ss_pred             CchhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCC-CceEEecccCceeeecCC
Confidence            33334566666666666666666666666544                    322222222 226666667778876655


Q ss_pred             CCCCCC--C--CCC-CCCCccEEEEEECCHHHHHHHHHHCCCeEEecCCCc---eEEEEECCCCCeEEEEee
Q 032542           73 NPDPLS--G--RPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR---PAIFTRDPDANALEFTQV  136 (138)
Q Consensus        73 ~~~~~~--~--~~~-~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~---~~~~~~DPdG~~~e~~~~  136 (138)
                      +....+  +  .+. .+.+.+||||+|+|++++.++|+++|+++......+   ..+++.||||+.|||...
T Consensus        97 Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen   97 GTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            443332  1  111 234789999999999999999999999987653322   468999999999999764

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.69  E-value=3.7e-15  Score=88.90  Aligned_cols=114  Identities=18%  Similarity=0.220  Sum_probs=80.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeE-EEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .-+.|..|.++|++++++||+++|||+..........  ..+.+..++.. .-.+ .....    .++ +.....+.|.|
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~~gG~l-~~~~~----~~p-~~~~~~iy~~v   79 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEM--RYAVFPADGAGAGGGL-MARPG----SPP-GGGGWVIYFAV   79 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCCCc--eEEEEECCCcccccee-ccCCc----CCC-CCCCEEEEEec
Confidence            3578999999999999999999999998886443222  22223222211 1111 11111    111 13345788889


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           95 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|+++..++.++.|.++..+    +++++.+.+.||+||+|.|.+..
T Consensus        80 ~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            99999999999999998765    55889999999999999998764

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.64  E-value=8.7e-15  Score=85.58  Aligned_cols=118  Identities=19%  Similarity=0.227  Sum_probs=82.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCC---CCCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP---EHGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~hi~~~   93 (138)
                      .+-.|+|.|+|++++++||.. |||+......++.   ....+..++....|............+   ...+.-.-+++.
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls   78 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLS   78 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEec
Confidence            356789999999999999997 9999988766443   233344455555555433222111111   123444678888


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeecC
Q 032542           94 IR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        94 v~---d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      +.   ++|++.++..+.|.+...+   .+..+...|+|||||.||+...+|
T Consensus        79 ~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          79 AGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             cCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            86   6889999999999988543   456678899999999999987654

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.59  E-value=1e-13  Score=79.95  Aligned_cols=112  Identities=24%  Similarity=0.361  Sum_probs=73.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCC--CCCCccEE--EEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE--HGGRDRHT--CIA   93 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~hi--~~~   93 (138)
                      +-|+++.|+|++++++||.++||++.-...+      .++.+.+=+.++.....+.+......+.  +.-...|+  .+.
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~   78 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLP   78 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEE
Confidence            6799999999999999999999998665433      2233333123332222222221111111  12223354  455


Q ss_pred             ECCHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEe
Q 032542           94 IRDVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        94 v~d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++|--++.++|+++|+....+        ++.++.+++.||.||.+|+..
T Consensus        79 ~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          79 VEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             HHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            678889999999999877433        557889999999999999864

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.54  E-value=1e-13  Score=89.57  Aligned_cols=98  Identities=18%  Similarity=0.166  Sum_probs=70.4

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCCCCC--CCeeEEEEEeC--CeEEEEeecCCCCCCC--CC---CCCC
Q 032542           16 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNPDPLS--GR---PEHG   84 (138)
Q Consensus        16 ~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~~~--~~~~~l~~~~~~~~~~--~~---~~~~   84 (138)
                      .+++||++.|+  |++++.+||+++|||+.........  .......+..+  ...+.|..........  ..   ...+
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            57999999999  9999999999999999876544222  23344555553  3566676543321110  00   1135


Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      .+++|+||.|+|+++++++|+++|+++..
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~  110 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLP  110 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeecc
Confidence            78899999999999999999999998854

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.52  E-value=1.6e-12  Score=78.98  Aligned_cols=107  Identities=18%  Similarity=0.140  Sum_probs=75.3

Q ss_pred             EEEe-CCHHHHHHHHHHhhCCeeeccCCC----------CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           22 GILC-ENLERSLEFYQNILGLEINEARPH----------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        22 ~l~v-~d~~~a~~fy~~~lg~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      .|.+ .|.++|++||+++||+++......          .......+.+++++..+.+.........     ..+...++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEEE
Confidence            4566 899999999999999998865431          1122345667888887777654322211     12334678


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           91 CIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        91 ~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                      ++.|+|   +++++++|.+.| ++..+    +++.+..+++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            999886   677789987777 55432    56888999999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.47  E-value=1.2e-11  Score=75.04  Aligned_cols=113  Identities=19%  Similarity=0.164  Sum_probs=83.1

Q ss_pred             EEEeC-CHHHHHHHHHHhhCCeeeccCCCCC----------CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           22 GILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        22 ~l~v~-d~~~a~~fy~~~lg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      -|..+ |-++|.+||+++||.+.........          .....+.+.+++..+.+........   ....++....+
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~---~~~~~~~s~~l   81 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG---ATEGGGTSLSL   81 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC---cccCCCeeEEE
Confidence            36677 9999999999999999887655444          3445677888877766654332221   11112233467


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .+.++|++++.+++.+.|+++..+    .+|.++..++||.|+.|.|.+..
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            777889999999999999877655    77999999999999999998653

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.41  E-value=4.1e-12  Score=89.30  Aligned_cols=105  Identities=17%  Similarity=0.187  Sum_probs=73.0

Q ss_pred             cCCceeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCCC--CCCCeeEEEEEe--CCeEEEEeecCCCCCCCC----
Q 032542           10 CLDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWV--GAEMIHLMELPNPDPLSG----   79 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~----   79 (138)
                      ...+.+.+++||++.|+  |++++++||+++|||+.......  .........+..  ++..++|...........    
T Consensus       151 ~~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~f  230 (353)
T TIGR01263       151 PPGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEF  230 (353)
T ss_pred             CCCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHH
Confidence            34577899999999999  99999999999999988754331  112222223333  345677764322111110    


Q ss_pred             -CCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           80 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        80 -~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                       ....+.+++|+||.|+|+++++++|+++|+++...
T Consensus       231 l~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~  266 (353)
T TIGR01263       231 LEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDT  266 (353)
T ss_pred             HHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcC
Confidence             11136788999999999999999999999987543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.41  E-value=1.5e-11  Score=86.47  Aligned_cols=98  Identities=12%  Similarity=0.111  Sum_probs=71.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCccEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIA   93 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi~~~   93 (138)
                      ++++|+.+.|+|++++.+||.+.|||+.......... .....++.|+..+.+...........  ...++.+..|++|.
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~-~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~   79 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHRE-KASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFR   79 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCc-eeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEE
Confidence            3689999999999999999999999998875221111 12333566777888875543321111  11356788999999


Q ss_pred             ECCHHHHHHHHHHCCCeEEec
Q 032542           94 IRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        94 v~d~~~~~~~l~~~g~~~~~~  114 (138)
                      |+|+++++++++++|+++..+
T Consensus        80 V~Dv~~a~~~l~~~Ga~~v~~  100 (353)
T TIGR01263        80 VDDAAAAFEAAVERGAEPVQA  100 (353)
T ss_pred             ECCHHHHHHHHHHCCCEeccC
Confidence            999999999999999988543

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.35  E-value=4.9e-12  Score=76.14  Aligned_cols=120  Identities=22%  Similarity=0.315  Sum_probs=71.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCe---eEEEEEeCCeEEEEeecC-----C-CCCCCCC--CCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY---RGAWLWVGAEMIHLMELP-----N-PDPLSGR--PEHG   84 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-----~-~~~~~~~--~~~~   84 (138)
                      +++.|+.|.|+|++++++||+++||++............   ...+..............     . .......  ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            368999999999999999999999999988655332211   111111110000110000     0 0000000  0011


Q ss_pred             --CCccEEEEEECC---HHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCeEEEEe
Q 032542           85 --GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        85 --~~~~hi~~~v~d---~~~~~~~l~~~g~~~~~~~--~~~~~~~~~DPdG~~~e~~~  135 (138)
                        .+..|+++.+++   .......+...|..+....  .....+|++||||+.+|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence              246799999997   5666666666777764431  12228999999999999974

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=99.25  E-value=1.2e-10  Score=80.13  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=69.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC-
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   95 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~-   95 (138)
                      ..-||+|.|+|+++|++||+++|++.. ...+  ..    .-+  ++..+.+..... +.      ....-.-+|+.++ 
T Consensus       247 ~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~a----~cm--~dtI~vMllt~~-D~------~~~~evLl~Ls~~S  310 (357)
T PRK01037        247 KTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--KL----FLL--GKTSLYLQQTKA-EK------KNRGTTTLSLELEC  310 (357)
T ss_pred             ceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--cc----ccc--cCcEEEEEecCC-CC------CCcceEEEEeccCC
Confidence            466999999999999999999988875 3221  11    112  444344433322 11      1122356888887 


Q ss_pred             --CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEee
Q 032542           96 --DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        96 --d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                        ++|++.++..+.|.+...+  ..|. .-.|+|||||.||++..
T Consensus       311 re~VD~lv~~A~aaGG~~~~~~~D~Gf-~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        311 EHDFVRFLRRWEMLGGELGEQADGHFP-LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCcccccC-cceeECCCCCEEEEEEE
Confidence              5888899999999865333  2233 78899999999999853

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.23  E-value=8.1e-11  Score=83.16  Aligned_cols=102  Identities=14%  Similarity=0.121  Sum_probs=73.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-----CCCeeEEEEEeCC--eEEEEeecCCC---CCCCC--
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWVGA--EMIHLMELPNP---DPLSG--   79 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~l~~~~~~---~~~~~--   79 (138)
                      ...+.+|+||++.|++++.+..||+++|||+........     ..+.+...+..++  ..+.|......   .....  
T Consensus       175 ~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eF  254 (398)
T PLN02875        175 DYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTY  254 (398)
T ss_pred             CCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHH
Confidence            344678999999999999999999999999887543321     2234566666654  56777654321   11111  


Q ss_pred             -CCCCCCCccEEEEEECCHHHHHHHHHHC----CCeEEe
Q 032542           80 -RPEHGGRDRHTCIAIRDVSKLKMILDKA----GISYTL  113 (138)
Q Consensus        80 -~~~~~~~~~hi~~~v~d~~~~~~~l~~~----g~~~~~  113 (138)
                       ....++|++||||.|+||.++.++|+++    |+++..
T Consensus       255 L~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~  293 (398)
T PLN02875        255 LEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMP  293 (398)
T ss_pred             HHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCC
Confidence             1123589999999999999999999998    998754

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.15  E-value=4.4e-10  Score=73.13  Aligned_cols=118  Identities=18%  Similarity=0.201  Sum_probs=77.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-----------CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG   84 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~   84 (138)
                      .++-|+.+.|-|..+++.||+++||+++........           ......++..|...-++...-..+-......-+
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelG   95 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELG   95 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceecc
Confidence            467789999999999999999999999876543222           222234455553322222211122222344556


Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEeec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ....|+.+.++|+-...+.++..|.+    ..+.-.+++.||||+.|++.+..
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~~----~~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGGK----GSGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCCc----ccceEEEEEECCCCcEEEEeccC
Confidence            77889999988888877777665542    23444678899999999998643

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.07  E-value=3.2e-10  Score=72.38  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=58.7

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCC--CCC------CCCCCccE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRP------EHGGRDRH   89 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~------~~~~~~~h   89 (138)
                      |+|+.+.|+|++++.++|.+.|||.+.........+...+.+.+++.+++++.........  ...      ..+.++..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999998889999998777666566666677777799999865332211  111      14677889


Q ss_pred             EEEEECCHHHHHHHHHHCCCe
Q 032542           90 TCIAIRDVSKLKMILDKAGIS  110 (138)
Q Consensus        90 i~~~v~d~~~~~~~l~~~g~~  110 (138)
                      +|+.++|+++..++|++.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999975

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.06  E-value=2.5e-09  Score=69.71  Aligned_cols=109  Identities=19%  Similarity=0.248  Sum_probs=73.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .+..|.|.|.|+++++.||.+.||+++.......    ..+.+..++  +.+++....+....      ..+...++|.+
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekeek~----t~~~mgYgd~q~~LElt~~~~~id~------~kg~griafai  218 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEEKY----TRARMGYGDEQCVLELTYNYDVIDR------AKGFGRIAFAI  218 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhhhh----hhhhhccCCcceEEEEEeccCcccc------cccceeEEEec
Confidence            4889999999999999999999999998753221    223344443  45666544433211      13344566665


Q ss_pred             --CCHHHHHHHHHHCCCeEE----ec--C--CCceEEEEECCCCCeEEEEe
Q 032542           95 --RDVSKLKMILDKAGISYT----LS--K--SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        95 --~d~~~~~~~l~~~g~~~~----~~--~--~~~~~~~~~DPdG~~~e~~~  135 (138)
                        +++..+.+..+..+.++.    ..  +  .....+.+.||||+.+.|+.
T Consensus       219 p~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  219 PTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             cccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence              478888888888755442    21  2  23467889999999998874

>PRK10148 hypothetical protein; Provisional

Probab=99.04  E-value=5.4e-08  Score=60.43  Aligned_cols=108  Identities=14%  Similarity=0.050  Sum_probs=71.7

Q ss_pred             EEeC-CHHHHHHHHHHhhCCeeeccCC-----C---------------CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCC
Q 032542           23 ILCE-NLERSLEFYQNILGLEINEARP-----H---------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP   81 (138)
Q Consensus        23 l~v~-d~~~a~~fy~~~lg~~~~~~~~-----~---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~   81 (138)
                      |..+ |-++|.+||+++||.++.....     .               .......+.+++++..+.+.......     +
T Consensus         7 L~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~~-----~   81 (147)
T PRK10148          7 LSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSG-----K   81 (147)
T ss_pred             EEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCCc-----C
Confidence            4554 8999999999999988753311     0               11234467788887766554321111     1


Q ss_pred             CCCCCccEEEEEECCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           82 EHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        82 ~~~~~~~hi~~~v~d~~~---~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .. ....++++.++|.++   +.++| +.|.++..+    .++.+...++||.|+.|.|....
T Consensus        82 ~~-~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~~  142 (147)
T PRK10148         82 AH-YSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVK  142 (147)
T ss_pred             CC-CCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEecC
Confidence            11 124678888888776   56666 467766544    66888999999999999997643

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.00  E-value=6.9e-09  Score=68.92  Aligned_cols=97  Identities=23%  Similarity=0.273  Sum_probs=65.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCC-CCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP-DPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.|+||.|.|.|+++|.+||+++|||+.....+      ...|+..|+...++....-. ...........++..+.+.+
T Consensus       167 t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~  240 (265)
T COG2514         167 TIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHT  240 (265)
T ss_pred             cEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEc
Confidence            469999999999999999999999999998733      44778888876666442211 11111223446677888888


Q ss_pred             CCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 032542           95 RDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~  134 (138)
                      ++-..+.......                .||.|+.+.+.
T Consensus       241 ~~~~~l~~~~~~~----------------~Dp~G~~i~~~  264 (265)
T COG2514         241 PDPEKLDATGTRL----------------TDPWGIVIRVV  264 (265)
T ss_pred             CCcccccccccce----------------ecCCCceEEEe
Confidence            7643332111111                89999988774

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.81  E-value=2.8e-08  Score=67.36  Aligned_cols=105  Identities=15%  Similarity=0.152  Sum_probs=73.0

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCC--eeEEEEEeCCeEEEEeecCCCCCC---CCCCCCC
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP--YRGAWLWVGAEMIHLMELPNPDPL---SGRPEHG   84 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~   84 (138)
                      +..-++..++||.+.|.|...++.||+..|||++....+.....  ....-++.|+..+.+...-.+...   ...+.++
T Consensus        10 ~~~g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hg   89 (381)
T KOG0638|consen   10 PEAGKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHG   89 (381)
T ss_pred             ccccceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcc
Confidence            33446788999999999999999999999999988744321111  111224445554444433333221   1233577


Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                      .+..-+||+|+|++++...+.++|+++..+
T Consensus        90 dgvkdvafeVeD~da~~~~~va~Ga~v~~~  119 (381)
T KOG0638|consen   90 DGVKDVAFEVEDADAIFQEAVANGAKVVRP  119 (381)
T ss_pred             cchhceEEEecchHHHHHHHHHcCCcccCC
Confidence            778899999999999999999999988654

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.80  E-value=5.7e-08  Score=59.36  Aligned_cols=121  Identities=11%  Similarity=0.028  Sum_probs=76.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      .++.+.++.+|.+.+++.+++..|++ .|||+........    ....++-|+..+-+-..++.........++.+..-+
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~ai   77 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAI   77 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEE
Confidence            35778999999999999888888886 5999998864322    233456677777664432211100112367788899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEee
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|+|+|.++++++..+.|.+....   ......--++-+.|.++-|++.
T Consensus        78 afrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   78 AFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             EEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE-
T ss_pred             EEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEec
Confidence            999999999999999999987543   2233344566666666666653

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.73  E-value=1.8e-06  Score=50.73  Aligned_cols=108  Identities=17%  Similarity=0.170  Sum_probs=60.4

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      +-.|.|+|-+...+||+++|||++.....      ..+++...  ...+.+-..+....+  .-....-+.++.+.|++-
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr--~V~G~KKl~~ivIkv~~~   74 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTR--AVEGPKKLNRIVIKVPNP   74 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESSH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccc--cccCcceeeEEEEEcCCH
Confidence            45789999999999999999999987644      22334332  234555444433211  111223467899999976


Q ss_pred             HHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEee
Q 032542           98 SKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .++.+- .++|.++...  ...++.|-..+|+|..|.+...
T Consensus        75 ~EIe~L-Lar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   75 KEIEAL-LARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             HHHHHH-HHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             HHHHHH-HhcccccceeEEcCCceEEEEECCCCCEEEEEEc
Confidence            665443 3555554322  4567888889999999998754

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.69  E-value=1.1e-06  Score=62.60  Aligned_cols=118  Identities=15%  Similarity=0.154  Sum_probs=78.2

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC--CCCCeeEEEEEeCCeEEEEeecCCCCC------------CC---C-
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDP------------LS---G-   79 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~~---~-   79 (138)
                      ++||.++|.|...+..||...|||+.......  .........++.|+..+.+-....+..            .+   . 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            58999999999999999999999988765442  111122344566766666655422200            00   0 


Q ss_pred             -----CCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecCC-------C--ceEEEEECCCCCeEEEEe
Q 032542           80 -----RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-------G--RPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        80 -----~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~-------~--~~~~~~~DPdG~~~e~~~  135 (138)
                           ...++.++.-++|+|+|++++++++.++|.+...++.       .  ....-+.-++|..+-|++
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVd  150 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVS  150 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEc
Confidence                 0136788889999999999999999999988754311       1  123345666666666655

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.52  E-value=3e-07  Score=63.34  Aligned_cols=101  Identities=14%  Similarity=0.198  Sum_probs=69.0

Q ss_pred             ceeeeeeeEEEEe--CCHHHHHHHHHHhhCCeeeccCC--CCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCC---CCC
Q 032542           13 YGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGR---PEH   83 (138)
Q Consensus        13 ~~~~~l~hi~l~v--~d~~~a~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~---~~~   83 (138)
                      ..+..|+|++..|  ..++.+..||+++|+|+.....+  .........-+.....  ++.|-...+..+....   .-.
T Consensus       163 ~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~  242 (363)
T COG3185         163 VGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYR  242 (363)
T ss_pred             cCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhC
Confidence            4467899999876  59999999999999998876543  3333444444555333  3333222221111111   125


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      +.+++||+|.++||-++.++|+++|+++.+
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~  272 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKFLP  272 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCccCC
Confidence            788999999999999999999999998743

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.07  E-value=0.00011  Score=50.98  Aligned_cols=114  Identities=11%  Similarity=0.023  Sum_probs=75.7

Q ss_pred             cCCceeeeeeeEEEEeCCH-HHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           10 CLDYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~-~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .-++...++.+|.+.|+|. ++..+++. .|||..........    ...++-|+..+-+-..+..........++++..
T Consensus        15 ~~P~~~~GfeFvEf~~~d~~~~l~~l~~-~lGF~~~~~Hrsk~----v~l~rQGdinlvvn~~~~s~a~~f~~~Hgps~~   89 (363)
T COG3185          15 ANPEGTDGFEFVEFAVPDPQEALGALLG-QLGFTAVAKHRSKA----VTLYRQGDINLVVNAEPDSFAAEFLDKHGPSAC   89 (363)
T ss_pred             cCCCCCCceeEEEEecCCHHHHHHHHHH-HhCccccccccccc----eeEEEeCCEEEEEcCCCcchhhHHHHhcCCchh
Confidence            3445578999999999999 55555555 59998876544221    122344666555543333211112235677788


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec-------------CCCceEEEEECCCC
Q 032542           89 HTCIAIRDVSKLKMILDKAGISYTLS-------------KSGRPAIFTRDPDA  128 (138)
Q Consensus        89 hi~~~v~d~~~~~~~l~~~g~~~~~~-------------~~~~~~~~~~DPdG  128 (138)
                      -++|.|+|...+.++.++.|.+....             ..|+...||-|.+|
T Consensus        90 a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          90 AMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             eeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            89999999999999999999854321             23667788888873

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.87  E-value=0.0015  Score=39.00  Aligned_cols=96  Identities=21%  Similarity=0.194  Sum_probs=59.6

Q ss_pred             CCHHHHHHHHHHhhCCeeecc---CCC----CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH-
Q 032542           26 ENLERSLEFYQNILGLEINEA---RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV-   97 (138)
Q Consensus        26 ~d~~~a~~fy~~~lg~~~~~~---~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~-   97 (138)
                      .+-++|.+||.++||-.....   .+.    .......+.+.+++..+.........     + . +...++++.++|. 
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~~~-----~-~-~~~~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGPDF-----P-F-GNNISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEESTS-----------TTEEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCCCC-----C-C-CCcEEEEEEcCCHH
Confidence            689999999999999533221   111    12233456678888877665544111     1 1 2236788888865 


Q ss_pred             --HHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 032542           98 --SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        98 --~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~  134 (138)
                        +++.++|.+.|-     +.. +.-.+.|-.|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~-----~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ-----WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE-----TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC-----ccc-eeEEEEeCCCCEEEeC
Confidence              455788877665     333 7889999999999885

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.79  E-value=2.2e-05  Score=53.68  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=68.8

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCCCCCCCee-----EEEEEeCCeEEEEeecCCCCCCCCC---
Q 032542           11 LDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYR-----GAWLWVGAEMIHLMELPNPDPLSGR---   80 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~---   80 (138)
                      +.+.+..++|+...++  .++.+.+||.+.|||.-.+..++......     ..-+...+..+.+ ....+.+....   
T Consensus       172 ~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~m-pinEp~~G~k~ksQ  250 (381)
T KOG0638|consen  172 PKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKM-PINEPAPGKKKKSQ  250 (381)
T ss_pred             CccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEE-eccCCCCCCccHHH
Confidence            3467788999999999  77899999999999987776654332111     1112222223332 22222211111   


Q ss_pred             ------CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           81 ------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        81 ------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                            +..++|++|+++.++||-++.+.|+++|.++..+
T Consensus       251 Iqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~  290 (381)
T KOG0638|consen  251 IQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSP  290 (381)
T ss_pred             HHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccC
Confidence                  1256789999999999999999999999988543

>PF15067 FAM124: FAM124 family

Probab=97.71  E-value=0.00061  Score=44.89  Aligned_cols=111  Identities=19%  Similarity=0.267  Sum_probs=63.3

Q ss_pred             ceeccCCceeee---------eeeEEEEeC--CHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe---CCeEEEE--e
Q 032542            6 LFHICLDYGVVS---------VHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHL--M   69 (138)
Q Consensus         6 ~~~~~~~~~~~~---------l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~---~~~~~~l--~   69 (138)
                      .|...+.|.+.+         +-.++|+|+  |.+.+++||+-+|+-+......      +..++..   .+..+.|  -
T Consensus       108 fysl~~~~PlWavr~VH~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~------~FC~F~lys~~~~~iQlsLK  181 (236)
T PF15067_consen  108 FYSLDPGMPLWAVRQVHYGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE------DFCFFTLYSQPGLDIQLSLK  181 (236)
T ss_pred             ceecCCCCceeEEeeeeccccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC------CcEEEEEecCCCeEEEEEec
Confidence            455566665533         345678888  9999999999999988766544      2222222   2333333  2


Q ss_pred             ecCCCCCCCCCCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEE
Q 032542           70 ELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE  132 (138)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e  132 (138)
                      +.+..  ....|   ....-+.|.|.|+.++..-|-.-=.++..     ..--.+|||||.|=
T Consensus       182 ~lp~~--~~p~p---~esavLqF~V~~igqLvpLLPnpc~PIS~-----~rWqT~D~DGNkIL  234 (236)
T PF15067_consen  182 QLPPG--MSPEP---TESAVLQFRVEDIGQLVPLLPNPCSPISE-----TRWQTEDYDGNKIL  234 (236)
T ss_pred             cCCCC--CCccc---ccceEEEEEecchhhhcccCCCCcccccC-----CcceeeCCCCCEec
Confidence            22111  11111   22346999999999886554222111111     12345899999874

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=97.30  E-value=0.0015  Score=38.21  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=39.3

Q ss_pred             cEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCC-CeEEEEeec
Q 032542           88 RHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-NALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~-~g~~~~~~----~~~~~~~~~~DPdG-~~~e~~~~~  137 (138)
                      .|++|.|+|++++.+.+.+ .|+.....    ..+.+..++..++| ..||++++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            4999999999999999998 89876433    34556677888888 689999875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.83  E-value=0.0048  Score=35.61  Aligned_cols=90  Identities=20%  Similarity=0.285  Sum_probs=40.9

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC--
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--   95 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~--   95 (138)
                      +..+.|.|+| +++.+||+++||-..                   ...+.+.+..++.-....... =.+--+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~-------------------~~~l~f~ea~G~DL~~~~~~t-wDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQL-------------------PFFLTFQEAQGPDLTIENNET-WDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHH-------------------TTTEEEEE---CCGSS-TTSB-SSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCC-------------------CceEEEeeccCCccccCCCcE-EeeEEEEEEecCc
Confidence            6678999999 889999999986221                   122333333333211111111 12456778887  


Q ss_pred             -CHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeE
Q 032542           96 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  131 (138)
Q Consensus        96 -d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~  131 (138)
                       |+.++.+++.+.+.  -- +-..+.+.+.||.|+.|
T Consensus        65 ~Dl~~L~~~le~~~~--fi-dKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   65 FDLAALKSHLEEQEF--FI-DKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             --HHHHHHHTTTS-E--E---TT-SEEEEE-TTS-EE
T ss_pred             ccHHHHHHHhcccce--Ee-cCCceEEEEECCcceEE
Confidence             78888899887332  11 33566889999999865

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=96.31  E-value=0.035  Score=34.67  Aligned_cols=52  Identities=15%  Similarity=0.179  Sum_probs=37.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-eEEEEe
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLM   69 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~   69 (138)
                      ++++||+|.|+|+.+|.+-+++ .|.+......+... -..+|+.-.+ ..+++.
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~dGk~-K~iaF~~dpDgywiei~  166 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLKDGKM-KPIAFLHDPDGYWIEIE  166 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCCCccc-cceeEEECCCCCeEEEe
Confidence            6899999999999999999998 99996665443332 3456665543 355554

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=95.89  E-value=0.064  Score=32.59  Aligned_cols=54  Identities=15%  Similarity=0.226  Sum_probs=36.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEee
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLME   70 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~   70 (138)
                      .++.|+++.|+|++++.+..++ .|.++.........+.+.++++-. +..+++++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4688999999999999999998 798877643222223344555542 34566654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=95.32  E-value=0.24  Score=30.03  Aligned_cols=58  Identities=12%  Similarity=0.015  Sum_probs=43.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   74 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   74 (138)
                      .++.|+.+.|+|++++.+-.++ .|.++.........+.+.++++- ++..++|++....
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            4688999999999999999987 89998865443344445566655 4568888886554

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN02367 lactoylglutathione lyase

Probab=95.15  E-value=0.22  Score=33.46  Aligned_cols=55  Identities=20%  Similarity=0.301  Sum_probs=39.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      .+++|+++.|.|++++.+..++ .|.++..... .......+|++- ++..+++++..
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~P~-~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKKPN-DGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeCCc-cCCceEEEEEECCCCCEEEEEecc
Confidence            4799999999999999999987 9999875332 221124455544 45688888654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=94.78  E-value=0.057  Score=34.39  Aligned_cols=50  Identities=24%  Similarity=0.310  Sum_probs=28.0

Q ss_pred             ccEEEEEECCHHHHHHHH-HHCCCeEEec---CC-CceEEEEECCCCCeEEEEeec
Q 032542           87 DRHTCIAIRDVSKLKMIL-DKAGISYTLS---KS-GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l-~~~g~~~~~~---~~-~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +.|+.+.|+|++++.+++ ++.|.++...   +. |.....+.=++| .+|++..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~-YlEli~i~   55 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDG-YLELIAID   55 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSS-EEEEEEES
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCc-eEEEEEeC
Confidence            369999999999999999 7789988765   22 444433333667 99998754

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=94.71  E-value=0.31  Score=28.68  Aligned_cols=31  Identities=13%  Similarity=0.374  Sum_probs=26.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEAR   47 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~   47 (138)
                      .++.|+.+.|+|++++.+...+ .|.++....
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~~  101 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQEG  101 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeeccC
Confidence            5689999999999999999987 788877643

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=94.46  E-value=0.49  Score=28.02  Aligned_cols=29  Identities=3%  Similarity=0.306  Sum_probs=24.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINE   45 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~   45 (138)
                      .++.|+++.|.|++++.+-..+ .|.++..
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            4688999999999999998877 7988754

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.42  E-value=0.53  Score=27.40  Aligned_cols=50  Identities=18%  Similarity=0.078  Sum_probs=34.8

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec---CC-CceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~~-~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++.|+++.|+|++++.+.+++ .|..+...   .. ....+.+..+++..+++..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            468999999999999999986 79887543   11 1222344455666777764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=94.37  E-value=0.42  Score=29.92  Aligned_cols=50  Identities=8%  Similarity=0.082  Sum_probs=34.4

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEEC--CCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD--PDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~D--PdG~~~e~~~~  136 (138)
                      ++.|+++.|.|+++..+-+++ .|.+......+ ...++..  .++..+++.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGD-RVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCC-EEEEEecCCCCCCEEEEEeC
Confidence            468999999999999999977 58877654322 2222222  24778888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=93.93  E-value=0.6  Score=29.34  Aligned_cols=53  Identities=11%  Similarity=0.099  Sum_probs=37.3

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEe------cC------------C----CceEEEEECCCCCeEEEEeec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTL------SK------------S----GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~------~~------------~----~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .++.|+++.|.|+++..+-.++ .|.++..      ..            +    ..+..++..++|..+|+++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            3478999999999999999977 6876531      00            0    023445666778889998754

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=93.92  E-value=0.37  Score=26.73  Aligned_cols=40  Identities=18%  Similarity=0.213  Sum_probs=33.3

Q ss_pred             CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEe
Q 032542           96 DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +.+++.+.+++.|+.+..-   ..+.+.+...|.||..+|+.-
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            7899999999999976432   556788999999999999864

This is family M4 in the peptidase classification.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=93.62  E-value=0.82  Score=26.68  Aligned_cols=51  Identities=18%  Similarity=0.237  Sum_probs=35.7

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec---CC--CceEEEEECC---CCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS--GRPAIFTRDP---DANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~~--~~~~~~~~DP---dG~~~e~~~~  136 (138)
                      ++.|+++.|+|+++..+.+++ .|.+....   ..  .....++.+.   .|..+++.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            367999999999999999987 69877543   11  1234555554   5677877754

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.52  E-value=0.69  Score=27.31  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=32.8

Q ss_pred             CccEEEEEECCHHHHHHHHHHC----CCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~----g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.|+.+.|.|++++.+-+.+.    |.+....... ...|+...++..+++.+.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            3689999999999999988875    8877554221 223333234556666543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.40  E-value=1.1  Score=27.67  Aligned_cols=101  Identities=12%  Similarity=0.038  Sum_probs=58.2

Q ss_pred             EEeCCHHHHHHHHHHhhCCeeec---cCC----C-CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           23 ILCENLERSLEFYQNILGLEINE---ARP----H-DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        23 l~v~d~~~a~~fy~~~lg~~~~~---~~~----~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ..-.+.++|.+||.++|-=..+.   +.+    . .......+.+++++..+.-+......    ....... ..+.+.+
T Consensus        11 ~F~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~~----~f~fneA-~S~~v~~   85 (151)
T COG3865          11 WFDGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPNT----SFKFNEA-FSFQVAC   85 (151)
T ss_pred             EECCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCCc----CCCcCcc-EEEEEEc
Confidence            33489999999999988654332   111    1 12233455667766644433221111    1111122 3455555


Q ss_pred             CC---HHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEE
Q 032542           95 RD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        95 ~d---~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~  134 (138)
                      ++   +|.+.+.|.+.|.+      ....-+++|--|.-|+|.
T Consensus        86 ~~q~E~Drlwnal~~~g~e------~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          86 DDQEEIDRLWNALSDNGGE------AEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             CCHHHHHHHHHHHhccCcc------hhcceeEecccCcEEEEc
Confidence            54   77778898888862      334567899999988875

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=93.20  E-value=0.8  Score=29.68  Aligned_cols=56  Identities=20%  Similarity=0.299  Sum_probs=38.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   73 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   73 (138)
                      .++.|+++.|.|++++.+.+++ .|..+..... .......+|++- ++..++|++..+
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~p~-~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKKPD-DGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeCCc-cCCceeEEEEECCCCCEEEEEECCC
Confidence            3799999999999999999987 8998774322 111123344433 356788876543

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=93.15  E-value=0.72  Score=26.16  Aligned_cols=49  Identities=12%  Similarity=0.158  Sum_probs=32.8

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEecC-CCceEEEEECCCCCeEEEEe
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLSK-SGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~-~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +.|+++.|+|++++.+-+.+ .|.+..... ......++..+++..+++..
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~   51 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIE   51 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEe
Confidence            46999999999999998874 687765432 12233455555555667664

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=93.12  E-value=0.68  Score=27.11  Aligned_cols=46  Identities=15%  Similarity=0.193  Sum_probs=29.5

Q ss_pred             ccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEE
Q 032542           87 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE  132 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e  132 (138)
                      +.|+++.|+|+++..+-.+..|.+............+..++|..+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~   46 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLA   46 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEE
Confidence            3689999999999999888788876433221123334444444443

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=92.60  E-value=0.88  Score=25.44  Aligned_cols=47  Identities=13%  Similarity=0.186  Sum_probs=35.6

Q ss_pred             EEEEEECCHHHHHHHHHH-CCCeEEecCC--CceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~~~~~l~~-~g~~~~~~~~--~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+.+.+.|+++..+-+.+ .|.+......  ..+..++.++ +..+++.+.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~   50 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEG   50 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecC
Confidence            788999999999999998 8988766532  3455666665 778887764

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=92.28  E-value=1.5  Score=26.14  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.1

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECC--CCCeEEEEee
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  136 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DP--dG~~~e~~~~  136 (138)
                      +.|+.+.|+|+++..+.+.+ .|.+...........++..+  .+..+.+.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999999987 79887654332234454443  3456666543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.05  E-value=1.5  Score=25.55  Aligned_cols=49  Identities=20%  Similarity=0.268  Sum_probs=33.6

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +.|+++.|+|+++..+-+++ .|.+....    ..+....++.-.+|..+++++
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   55 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMT   55 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEc
Confidence            57999999999999998887 57765322    222233445444667788775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=92.02  E-value=2.3  Score=27.61  Aligned_cols=77  Identities=19%  Similarity=0.133  Sum_probs=41.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeecc-CCCCCCCeeEEE----EEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAW----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~-~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      -.++||+++|++.+.|.+|-...+..-..-. ..-++......-    +..++-.+..+..+-+..  ..++ ..|+-|+
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~--K~Yp-~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKD--KRYP-QEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---S--S--S-S-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCC--CCCC-CCCceEE
Confidence            4589999999999999999999887743321 111111111111    344566777777665543  2222 2567899


Q ss_pred             EEEEC
Q 032542           91 CIAIR   95 (138)
Q Consensus        91 ~~~v~   95 (138)
                      -|.++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99987

; PDB: 1K4N_A.

>PRK10291 glyoxalase I; Provisional

Probab=91.32  E-value=2  Score=25.55  Aligned_cols=56  Identities=14%  Similarity=0.080  Sum_probs=37.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC-CCCCCeeEEEEEe-CCeEEEEeecCC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELPN   73 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~~   73 (138)
                      ++.|+++.|.|++++.+-.++ .|.++..... ........+|++- ++..++|++...
T Consensus        65 ~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         65 AYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            688999999999999998887 8887764321 1111112344443 456888887653

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=90.79  E-value=1.9  Score=25.27  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=24.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeecc
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~   46 (138)
                      .++.|+++.|.|++++.+...+ .|.++...
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~  100 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDE  100 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCC
Confidence            4678999999999999998877 78887653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.28  E-value=2.4  Score=24.78  Aligned_cols=47  Identities=6%  Similarity=0.063  Sum_probs=32.8

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCC-CCeEEEEe
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  135 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPd-G~~~e~~~  135 (138)
                      +.|+.+.|+|+++..+-+.+ .|.++....+  ..+++..++ +..+.+.+
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~   51 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEE   51 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEe
Confidence            57999999999999999987 6988865522  234454443 45555544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=90.20  E-value=2.5  Score=24.79  Aligned_cols=48  Identities=13%  Similarity=0.094  Sum_probs=31.7

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCC-CCeEEEE
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFT  134 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPd-G~~~e~~  134 (138)
                      ++.|+.+.|.|+++..+-+++ .|.+....... ...++..++ +..+.+.
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~l~   51 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPED-GALYLRMDDRAWRIAVH   51 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCC-CeEEEEccCCceEEEEE
Confidence            367999999999999999977 69877544222 234454443 3444443

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=89.90  E-value=1.8  Score=28.13  Aligned_cols=51  Identities=18%  Similarity=0.173  Sum_probs=38.4

Q ss_pred             CccEEEEEEC--CHHHHHHHHHH-CCCeEEec------CCCceEEEEECCCC-CeEEEEee
Q 032542           86 RDRHTCIAIR--DVSKLKMILDK-AGISYTLS------KSGRPAIFTRDPDA-NALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~--d~~~~~~~l~~-~g~~~~~~------~~~~~~~~~~DPdG-~~~e~~~~  136 (138)
                      ++.|+++.|+  |++++.+.+++ .|.+..+.      ..+.++..+..|+| ..+++.++
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~   63 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEP   63 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecC
Confidence            4689999999  99999999876 78876543      13456678888865 56788764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.38  E-value=2.7  Score=24.03  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=26.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEAR   47 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~   47 (138)
                      .++.|+.+.|.|++++.+...+ .|..+....
T Consensus        66 ~~~~~~~~~v~di~~~~~~l~~-~g~~~~~~~   96 (119)
T cd07263          66 GGTPGLVLATDDIDATYEELKA-RGVEFSEEP   96 (119)
T ss_pred             CCceEEEEEehHHHHHHHHHHh-CCCEEeecc
Confidence            4688999999999999999987 898877644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=88.74  E-value=3.9  Score=25.08  Aligned_cols=55  Identities=15%  Similarity=0.079  Sum_probs=36.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC-CCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      ++.|+.+.|.|++++.+...+ .|.++..... .........+++- .+..++++...
T Consensus        86 g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        86 GFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             ceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            688999999999999999987 8887764321 1111122334333 35577777544

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=88.46  E-value=3.3  Score=23.87  Aligned_cols=28  Identities=11%  Similarity=0.199  Sum_probs=24.1

Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      ++.|+++.|.|++++.+.+...|.+...
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~   29 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVRE   29 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEe
Confidence            4689999999999999988878888754

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=88.29  E-value=2.8  Score=23.70  Aligned_cols=31  Identities=23%  Similarity=0.228  Sum_probs=26.4

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeecc
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~   46 (138)
                      ..+..|+.+.|.|++++.+.+.+ +|.++...
T Consensus        54 ~~~~~~~~~~v~dv~~~~~~l~~-~G~~~~~~   84 (108)
T PF12681_consen   54 PGGGFHLCFEVEDVDALYERLKE-LGAEIVTE   84 (108)
T ss_dssp             SSSEEEEEEEESHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCceeEEEEEEcCHHHHHHHHHH-CCCeEeeC
Confidence            45788999999999999999997 89887654

...

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=88.29  E-value=2.7  Score=24.37  Aligned_cols=28  Identities=18%  Similarity=0.234  Sum_probs=24.4

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      ++|+++.|.|+++..+-+++ .|.++...
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~   30 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVEE   30 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEee
Confidence            68999999999999999988 79887654

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.01  E-value=3.7  Score=23.94  Aligned_cols=48  Identities=15%  Similarity=0.211  Sum_probs=31.0

Q ss_pred             ccEEEEEECCHHHHHHHHHH----CCCeEEecCCCceEEEEECC-CCCeEEEEe
Q 032542           87 DRHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDP-DANALEFTQ  135 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~----~g~~~~~~~~~~~~~~~~DP-dG~~~e~~~  135 (138)
                      +.|+.+.|.|+++..+-+++    .|.+......+. ...+..+ .+..+.+..
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~-~~~~~~~~~~~~~~l~~   53 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPG-AVGYGKGGGGPDFWVTK   53 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCc-eeEeccCCCCceEEEec
Confidence            36999999999999888877    487765433122 3444444 245555544

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=87.63  E-value=3.8  Score=23.66  Aligned_cols=29  Identities=14%  Similarity=0.382  Sum_probs=25.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeecc
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~   46 (138)
                      ++.|+.+.|.|++++.+-..+ .|..+...
T Consensus        70 ~~~~i~~~v~did~~~~~l~~-~G~~~~~~   98 (121)
T cd07233          70 GFGHLAFAVDDVYAACERLEE-MGVEVTKP   98 (121)
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-CCCEEeeC
Confidence            678999999999999998886 88888764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.51  E-value=3.9  Score=23.62  Aligned_cols=29  Identities=14%  Similarity=0.225  Sum_probs=24.7

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      ++.|+.+.|+|+++..+-+++ .|.+....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~   32 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRF   32 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecc
Confidence            468999999999999999988 78877644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK11700 hypothetical protein; Provisional

Probab=87.35  E-value=6.1  Score=25.69  Aligned_cols=76  Identities=20%  Similarity=0.198  Sum_probs=45.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeecc-CCCCCCCeeEEEEE------eCCeEEEEeecCCCCCCCCCCCCCCCc
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~-~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      --..+||.++|++.+.|.+|-...+.+-..-. ..-++.  ..+-+.      .++-.+..+..+-+..  +.+++ .|+
T Consensus        37 ~~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGR--PI~l~~L~qPl~~~~w~I~cvELP~P~~--k~Yp~-eGW  111 (187)
T PRK11700         37 QLEADHIALRCNQNETAERWRQGFLQCGELLSENIINGR--PICLFELDQPLQVGHWSIDCVELPYPGE--KRYPH-EGW  111 (187)
T ss_pred             cccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe--eEEEEEcCCCceeCCcEEEEEEeCCCCC--CCCCC-CCc
Confidence            34589999999999999999988776533221 111111  122222      2445566666554432  22332 567


Q ss_pred             cEEEEEEC
Q 032542           88 RHTCIAIR   95 (138)
Q Consensus        88 ~hi~~~v~   95 (138)
                      -|+-+.++
T Consensus       112 EHIElVlp  119 (187)
T PRK11700        112 EHIELVLP  119 (187)
T ss_pred             eEEEEEec
Confidence            89999887

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.10  E-value=5.4  Score=24.88  Aligned_cols=73  Identities=15%  Similarity=0.132  Sum_probs=44.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeecc-CCCCCCCeeEEEE------EeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWL------WVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~-~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      ++|+.++|++.+.|.+|-+.++.+-..-. ..-++.  ...-+      .+++-.+..+..+-+..  +.++ ..|+-|+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGR--PI~l~~L~qPl~~~~~~I~cvELP~P~~--k~Yp-~eGWEHI   76 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGR--PIALIKLEKPLQFAGWSISIVELPFPKD--KKYP-QEGWEHI   76 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCe--eEEEEEcCCCceeCCcEEEEEEeCCCCC--CCCC-CCCceEE
Confidence            58999999999999999988776633221 111111  12222      23455666666654432  2222 2567899


Q ss_pred             EEEEC
Q 032542           91 CIAIR   95 (138)
Q Consensus        91 ~~~v~   95 (138)
                      -+.++
T Consensus        77 E~Vlp   81 (149)
T cd07268          77 EIVIP   81 (149)
T ss_pred             EEEec
Confidence            99887

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.24  E-value=4.7  Score=23.29  Aligned_cols=26  Identities=15%  Similarity=0.199  Sum_probs=22.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeecc
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~   46 (138)
                      |+.+.|.|++++.+...+ .|.++...
T Consensus        69 ~~~~~v~did~~~~~l~~-~G~~~~~~   94 (119)
T cd08359          69 ILNFEVDDVDAEYERLKA-EGLPIVLP   94 (119)
T ss_pred             EEEEEECCHHHHHHHHHh-cCCCeeec
Confidence            899999999999999987 78876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=86.11  E-value=4.6  Score=23.12  Aligned_cols=38  Identities=8%  Similarity=0.130  Sum_probs=29.0

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECC
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP  126 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DP  126 (138)
                      +.|+.+.|+|+++..+-+++ .|.++....+  ...++..+
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~--~~~~~~~~   41 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRDA--GSVYLRCS   41 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeecC--CeEEEecC
Confidence            67999999999999999988 7988765432  24555554

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=85.02  E-value=6.2  Score=23.61  Aligned_cols=49  Identities=18%  Similarity=0.240  Sum_probs=32.5

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCC---CCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD---ANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPd---G~~~e~~~  135 (138)
                      .+.|+++.|+|+++..+-+++ .|.+....... ...++..++   .+.+.+..
T Consensus         3 ~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-~~~~~~~~~~~~~~~i~l~~   55 (134)
T cd08360           3 RLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-RGAFLRAAGGGDHHNLFLIK   55 (134)
T ss_pred             eeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-cEEEEECCCCCCCcEEEEec
Confidence            478999999999999999877 69887543222 233454432   24555543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB

Probab=84.40  E-value=3.7  Score=21.59  Aligned_cols=27  Identities=11%  Similarity=0.137  Sum_probs=21.3

Q ss_pred             cEEEEEEC--CHHHHHHHHHHCCCeEEec
Q 032542           88 RHTCIAIR--DVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        88 ~hi~~~v~--d~~~~~~~l~~~g~~~~~~  114 (138)
                      ..+.|+++  +.+++.+.|+++|+++.++
T Consensus        43 ~~v~i~v~~~~~~~~~~~L~~~G~~v~~~   71 (72)
T cd04883          43 KILVFRVQTMNPRPIIEDLRRAGYEVLWP   71 (72)
T ss_pred             EEEEEEEecCCHHHHHHHHHHCCCeeeCC
Confidence            34556654  8889999999999998875

This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=83.09  E-value=7.7  Score=23.18  Aligned_cols=27  Identities=7%  Similarity=0.036  Sum_probs=22.7

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEe
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTL  113 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~  113 (138)
                      +.|+++.|+|++++.+-+.+ .|.++..
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~   28 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLV   28 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEec
Confidence            47999999999999998887 5877653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=82.71  E-value=7.5  Score=22.74  Aligned_cols=26  Identities=12%  Similarity=0.280  Sum_probs=21.9

Q ss_pred             cEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           88 RHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      .++.+.|+|+++..+-.+..|.+...
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~lGf~~~~   27 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTALGFEFNP   27 (124)
T ss_pred             EEEEeecCCHHHHHHHHHHCCCEEcc
Confidence            46889999999999999888887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=82.61  E-value=9.1  Score=23.65  Aligned_cols=54  Identities=11%  Similarity=0.060  Sum_probs=31.9

Q ss_pred             eeeeeEEEEeCCHHHHHH---HHHHhhCCeeeccCCCCCCC-eeEEEEEe-CCeEEEEee
Q 032542           16 VSVHHVGILCENLERSLE---FYQNILGLEINEARPHDKLP-YRGAWLWV-GAEMIHLME   70 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~---fy~~~lg~~~~~~~~~~~~~-~~~~~~~~-~~~~~~l~~   70 (138)
                      .+++|+++.|.|++++.+   ..++ .|+++.........+ ....|++- ++..+++..
T Consensus        66 ~g~~Hiaf~v~die~~~~~~~~L~~-~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          66 SGVHHAAFEVHDFDAQGLGHDYLRE-KGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             CceeEEEEEcCCHHHHHHHHHHHHH-CCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            579999999999999974   4443 677765432211111 11233333 355777764

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=81.63  E-value=4.8  Score=20.51  Aligned_cols=25  Identities=16%  Similarity=0.271  Sum_probs=21.6

Q ss_pred             ccEEEEEECCHHHHHHHHHHCCCeE
Q 032542           87 DRHTCIAIRDVSKLKMILDKAGISY  111 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~~g~~~  111 (138)
                      ...+.+++++.+.+.+.|+++|+++
T Consensus        40 ~~~v~~~ve~~~~~~~~L~~~G~~v   64 (65)
T cd04882          40 KALLIFRTEDIEKAIEVLQERGVEL   64 (65)
T ss_pred             eEEEEEEeCCHHHHHHHHHHCCceE
Confidence            3568899999999999999999864

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=80.62  E-value=11  Score=23.12  Aligned_cols=27  Identities=19%  Similarity=0.290  Sum_probs=23.0

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEE
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYT  112 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~  112 (138)
                      .+.|+.+.|+|++++.+-+++ .|.+..
T Consensus         4 ~l~Hv~i~V~Dle~s~~FY~~~LG~~~~   31 (144)
T cd07239           4 KISHVVLNSPDVDKTVAFYEDVLGFRVS   31 (144)
T ss_pred             eeeEEEEECCCHHHHHHHHHhcCCCEEE
Confidence            468999999999999999876 788764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PF07063 DUF1338: Domain of unknown function (DUF1338); InterPro: IPR009770 This domain is found in a variety of bacterial and fungal hypothetical proteins of unknown function

Probab=80.11  E-value=2.5  Score=29.73  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=22.8

Q ss_pred             CCCCccEEEEEE------CCHHHHHHHHHHCCCeEE
Q 032542           83 HGGRDRHTCIAI------RDVSKLKMILDKAGISYT  112 (138)
Q Consensus        83 ~~~~~~hi~~~v------~d~~~~~~~l~~~g~~~~  112 (138)
                      .+..++|+...|      .||+++.+.|+++|+++.
T Consensus       181 ~G~~~NH~T~~v~~l~~~~dI~~v~~~l~~~G~~~n  216 (302)
T PF07063_consen  181 HGYHINHFTPRVNRLKKFLDIDAVNAFLKERGIPMN  216 (302)
T ss_dssp             HTCS-SEEEEETTT-TT-S-HHHHHHHHHHTT--B-
T ss_pred             cccccceeeceeecccccccHHHHHHHHHHcCCCcc
Confidence            356789999999      999999999999999886

The structure of this domain has been solved by structural genomics. The structure implies a zinc-binding function, so it is a putative metal hydrolase (information derived from TOPSAN for PDB:3iuz).; PDB: 3LHO_A 3IUZ_A 2RJB_C.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	138
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		2e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMEL 71
           ++HV I   +LE++  FY+NILG +++EA P   LP  G  +          E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 126
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 127 D 127
           D
Sbjct: 123 D 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	138
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-30
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	9e-27
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-26
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	2e-23
1nki_A	135	Probable fosfomycin resistance protein; potassium	9e-22
3ghj_A	141	Putative integron gene cassette protein; integron	3e-21
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	6e-21
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	3e-19
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-17
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	2e-17
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	8e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	1e-16
3huh_A	152	Virulence protein STM3117; structural genomics, ny	6e-16
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	1e-15
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	4e-15
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	4e-15
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	7e-14
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	4e-13
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	9e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	2e-11
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	5e-05
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	6e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	8e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-10
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-10
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	1e-09
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-09
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-09
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-09
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	4e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	1e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	5e-08
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	7e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	8e-08
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-07
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	2e-07
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	3e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	3e-07
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	4e-05
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	6e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	8e-07
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	1e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	3e-06
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-04
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	5e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	1e-05
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	1e-05
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-05
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-05
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	3e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-04
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-04
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	3e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	3e-04
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	4e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	5e-04
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	5e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	7e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  105 bits (264), Expect = 2e-30
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 132
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 133 FTQ 135
             +
Sbjct: 124 LHE 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 96.0 bits (239), Expect = 9e-27
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 70
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 71  LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 126
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 127 DANALEFTQ 135
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 94.9 bits (236), Expect = 2e-26
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 15  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 130
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 131 LEFTQ 135
           +EF +
Sbjct: 119 IEFME 123

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 87.9 bits (218), Expect = 2e-23
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 75  DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 131
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 132 EF 133
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 83.3 bits (206), Expect = 9e-22
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 133
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 82.0 bits (203), Expect = 3e-21
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 77  LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 130
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 131 LEFT 134
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 81.8 bits (202), Expect = 6e-21
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 70
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 71  LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 124
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 125 DPDANALEFT 134
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 72.8 bits (179), Expect = 1e-17
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 129
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 130 ALEF 133
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 72.9 bits (179), Expect = 2e-17
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 73
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 74  --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 124
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 125 DPDANALEFTQ 135
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 71.7 bits (176), Expect = 3e-17
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 76
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 77  --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 127
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 128 ANALEFTQ 135
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 70.7 bits (173), Expect = 8e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 73
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 129
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 130 ALEF 133
             E 
Sbjct: 116 MFEL 119

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 70.2 bits (172), Expect = 1e-16
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 76
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 130
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 131 LEFTQ 135
           +E  +
Sbjct: 128 IELLE 132

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 68.9 bits (168), Expect = 6e-16
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 127
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 128 ANALEFTQ 135
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 67.5 bits (165), Expect = 1e-15
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 73
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 129
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 130 ALEF 133
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 66.1 bits (161), Expect = 4e-15
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 76
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 129
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 130 ALEFT 134
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 66.1 bits (161), Expect = 4e-15
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 127
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 128 ANALEF 133
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 63.7 bits (155), Expect = 7e-14
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 75
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 128
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 129 NALEFTQ 135
              EF +
Sbjct: 129 VLYEFCE 135

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 61.4 bits (149), Expect = 4e-13
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 61
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 62  GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 118
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 119 P-----AIFTRDPDANALEFTQ 135
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 60.3 bits (146), Expect = 9e-13
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 78  SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 127
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 128 ANALEF 133
              +E 
Sbjct: 138 RIKVEI 143

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 60.5 bits (146), Expect = 1e-12
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 129
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 130 ALEF 133
            +E 
Sbjct: 141 LIEV 144

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 73  NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 130
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 131 LEFTQVD 137
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 78  SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 131
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 132 EF 133
           E 
Sbjct: 266 EI 267

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 56.6 bits (136), Expect = 3e-11
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 79
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 80  RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 126
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 127 DANALEFTQ 135
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 57.7 bits (139), Expect = 6e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 73
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 128
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 129 NALEFTQVD 137
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 40.0 bits (93), Expect = 8e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 78  SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 131
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 132 EFT 134
           E  
Sbjct: 294 EIA 296

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 54.5 bits (131), Expect = 1e-10
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 79  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 134
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 135 Q 135
           +
Sbjct: 126 E 126

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 53.4 bits (128), Expect = 3e-10
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 72
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 73  NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 128
                SG                 V KL  +   AG +   +              DP+ 
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPER 124

Query: 129 NALEFTQVD 137
           N      V 
Sbjct: 125 NVFRINNVL 133

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 51.6 bits (124), Expect = 1e-09
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 79  GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 132
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 52.0 bits (124), Expect = 1e-09
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 128
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 129 NALEF 133
           N LEF
Sbjct: 121 NLLEF 125

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 25/129 (19%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           + S+  + +    L+R L FY N+LG +    +           + +G   I        
Sbjct: 24  MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRA---- 73

Query: 75  DPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP--------AIFTR 124
              +          H  I I      + K  L   G   T +   +         + +  
Sbjct: 74  ---AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVE 128

Query: 125 DPDANALEF 133
           DP  N +E 
Sbjct: 129 DPSGNIIEL 137

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 52.4 bits (125), Expect = 1e-09
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 78  SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 130
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 131 LEFTQV 136
           ++  Q+
Sbjct: 146 IQLMQI 151

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 50.4 bits (120), Expect = 4e-09
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 16  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 75
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 130
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 131 LEFTQVDG 138
           +E  +++G
Sbjct: 115 IELCELEG 122

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 49.5 bits (118), Expect = 1e-08
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 80  RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 133
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 134 TQ 135
            +
Sbjct: 116 VE 117

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 47.8 bits (114), Expect = 5e-08
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 73
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 127
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 47.5 bits (113), Expect = 7e-08
 Identities = 21/142 (14%), Positives = 46/142 (32%), Gaps = 20/142 (14%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 59
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 60  WVGAEMIHLMELPNPD--PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--YTLSK 115
            +G   + L+E             ++G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 116 SGRPAIF--TRDPDANALEFTQ 135
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 46.7 bits (111), Expect = 8e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 80  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 135
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 136 V 136
           +
Sbjct: 117 M 117

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 59
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 60  WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 113
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 114 SKSGRPAI--FTRDPD 127
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 46.4 bits (110), Expect = 1e-07
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 82
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 83  HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 134
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 135 Q 135
            
Sbjct: 123 A 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 77  LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 128
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 129 NALEF 133
           +  E 
Sbjct: 119 HIWEI 123

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 45.8 bits (108), Expect = 3e-07
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 79  GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 132
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 133 FTQVDG 138
                G
Sbjct: 139 VYAFAG 144

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 45.8 bits (108), Expect = 3e-07
 Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 10/118 (8%)

Query: 25  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRP 81
            +++++++++++ ILG   +     D+       ++       + HL          G P
Sbjct: 29  TKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFKGEP 88

Query: 82  EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 135
             G       + I  +  L   + + G         +P           D   L F +
Sbjct: 89  IKGV---AGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFE 143

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 46.8 bits (111), Expect = 3e-07
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 121
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 122 FTRDPDANALEF 133
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 40.6 bits (95), Expect = 4e-05
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 22/132 (16%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 147 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 206

Query: 74  PDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 123
           P+         GR  H         D+ +   ++      I        R          
Sbjct: 207 PEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP---TRHGLTHGKTIY 255

Query: 124 -RDPDANALEFT 134
             DP  N  E  
Sbjct: 256 FFDPSGNRNEVF 267

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 44.7 bits (106), Expect = 6e-07
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
           H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +    
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 80  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 127
           + E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 79  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 133
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 44.2 bits (104), Expect = 3e-06
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 13  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 73  NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 124
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 125 DPDANALEF 133
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 18/128 (14%), Positives = 38/128 (29%), Gaps = 15/128 (11%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  + + 
Sbjct: 151 VKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVACMRDM 209

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT--RDP 126
               G+  H      T    +       +       I        +     + F    +P
Sbjct: 210 TGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLYVFEP 263

Query: 127 DANALEFT 134
             N +E  
Sbjct: 264 GGNRIELF 271

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 68
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 69  MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 119
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 120 AIF--TRDPDANALEFTQ 135
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 41.3 bits (97), Expect = 1e-05
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 16  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 75
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 131
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 132 EFTQ 135
               
Sbjct: 114 NILS 117

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 75  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 124
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 125 DPDANALEF 133
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 42.0 bits (98), Expect = 2e-05
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 75  DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 124
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 125 DPDANALEF 133
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 41.8 bits (98), Expect = 2e-05
 Identities = 21/130 (16%), Positives = 38/130 (29%), Gaps = 24/130 (18%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
           GV+   H  +   NLE  + FY+N+LGL         ++ ++                  
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC--------------WDE 50

Query: 74  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 123
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 124 RDPDANALEF 133
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 7/121 (5%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDP 76
               ++ E++ +SLEFY+  LG+EI                 + +  + +  +   +P+ 
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 64

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALE 132
            +    H             V K    L  AG    L              +DPD N ++
Sbjct: 65  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVD 124

Query: 133 F 133
            
Sbjct: 125 L 125

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 39.9 bits (93), Expect = 3e-05
 Identities = 13/114 (11%), Positives = 28/114 (24%), Gaps = 9/114 (7%)

Query: 25  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 84
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVVPDNTQAWV 66

Query: 85  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 135
                  +       +      A          +P       RDP  N + F  
Sbjct: 67  WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 120

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 38.0 bits (88), Expect = 2e-04
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 27  NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 86
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 87  DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 138
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 74  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 128
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 129 NALEFTQVDG 138
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 125
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 126 PDANALEFTQVD 137
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 25  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 82
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 83  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 131
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 132 EFTQVD 137
              Q +
Sbjct: 115 RLIQNE 120

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 74  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 121
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 122 FTRDPDANALEF 133
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 36.7 bits (85), Expect = 5e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 21  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 80
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 81  PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 135
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%)

Query: 25  CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 84
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +           
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIVADN----- 61

Query: 85  GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 132
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 62  ---TSAWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 133 FTQ 135
           FT 
Sbjct: 118 FTA 120

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 74  PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 121
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 122 FTRDPDANALEF 133
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	138
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.95
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.94
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.93
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.93
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.93
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.93
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.93
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.93
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.93
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.93
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.92
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.92
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.92
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.92
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.92
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.92
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.92
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.92
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.91
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.91
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.91
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.91
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.91
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.91
3ghj_A	141	Putative integron gene cassette protein; integron	99.91
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.91
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.9
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.9
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.9
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.9
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.9
2i7r_A	118	Conserved domain protein; structural genomics cons	99.9
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.9
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.9
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.89
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.89
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.89
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.89
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.89
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.88
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.88
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.88
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.88
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.88
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.88
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.87
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.87
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.87
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.85
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.85
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.85
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.84
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.84
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.83
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.83
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.83
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.82
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.81
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.81
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.81
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.81
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.81
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.81
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.81
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.81
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.8
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.8
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.79
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.79
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.79
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.79
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.79
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.78
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.77
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.76
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.76
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.75
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.75
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.75
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.74
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.73
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.71
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.7
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.69
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.69
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.68
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.67
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.67
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.63
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.61
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.6
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.59
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.58
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.56
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.54
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.5
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.49
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.46
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.43
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.39
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.88
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.7
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.53
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.47
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.42
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.0
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	95.89
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	95.78
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	95.5
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	95.42
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	95.15
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	94.92
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	94.88
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	94.8
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	94.6
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	94.59
3ghj_A	141	Putative integron gene cassette protein; integron	94.51
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	94.06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	93.93
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	93.21
2p25_A	126	Glyoxalase family protein; structural genomics, MC	93.06
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	93.05
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	92.52
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	92.18
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	92.17
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	92.02
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	91.89
3huh_A	152	Virulence protein STM3117; structural genomics, ny	91.76
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	91.71
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	91.28
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	91.26
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	91.13
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	90.74
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	90.1
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	90.01
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	89.99
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	89.41
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	88.97
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	88.63
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	88.61
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	88.39
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	88.15
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	87.96
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	87.4
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	85.42
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	85.36
2g3a_A	152	Acetyltransferase; structural genomics, PSI, prote	85.12
1nki_A	135	Probable fosfomycin resistance protein; potassium	85.06
2i7r_A	118	Conserved domain protein; structural genomics cons	84.32
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	82.52
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	82.47
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	82.11
3lho_A	267	Putative hydrolase; structural genomics, joint cen	81.67
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	81.48
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	80.03

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.95  E-value=3.4e-27  Score=142.64  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=97.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEee-------cCCCCCCCCCCCCCC
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG   85 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~   85 (138)
                      |++++++|+.|.|+|++++++||+++|||++.............+++..++..++++.       ..........+....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            5678999999999999999999999999999876543333334677888888999987       333222222222456


Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +..|++|.|+|++++.++|+++|+++...    .++.+.++++|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            77899999999999999999999988643    456789999999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.94  E-value=1.1e-25  Score=134.75  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=92.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |++.+++|+.|.|+|++++++||+++||+++.............+++..++..++|+........+. .....+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            5677899999999999999999999999998764321111122355777777888886543322211 123456789999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           93 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .|+|++++.++|+++|+++...    .++.+.+|++|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    346689999999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.93  E-value=1.1e-24  Score=134.99  Aligned_cols=132  Identities=17%  Similarity=0.233  Sum_probs=98.8

Q ss_pred             ceeccCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC------CCeeEEEEEeCC-eEEEEeecCCCCCCC
Q 032542            6 LFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLS   78 (138)
Q Consensus         6 ~~~~~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~------~~~~~~~~~~~~-~~~~l~~~~~~~~~~   78 (138)
                      .....+.+++++++||.|.|+|++++++||+++|||++........      .....+++..++ ..++++......+..
T Consensus         8 ~~~~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~   87 (156)
T 3kol_A            8 VNSVLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPD   87 (156)
T ss_dssp             CCCCCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSS
T ss_pred             eccccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCC
Confidence            3344566788999999999999999999999999999887322111      011346777755 688888765543221


Q ss_pred             CCC-CCCCCccEEEEEEC--CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           79 GRP-EHGGRDRHTCIAIR--DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        79 ~~~-~~~~~~~hi~~~v~--d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..+ ....+..|++|.|+  |+++++++|+++|+++..+   ...++.+|++|||||.|||++.+
T Consensus        88 ~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           88 PNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             SSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            111 23456789999998  9999999999999998543   34557999999999999999865

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.93  E-value=1.3e-24  Score=131.37  Aligned_cols=120  Identities=17%  Similarity=0.271  Sum_probs=95.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      ..|++.+++|+.|.|+|++++++||+++|||++.....      ..+++..++..+.+........+ .......+..|+
T Consensus         4 ~~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~   76 (133)
T 3ey7_A            4 FLMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEP-KAQNVRVGSADL   76 (133)
T ss_dssp             CCCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSS-CCTTCCTTCCEE
T ss_pred             eEeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCccc-cCCCCCCCccEE
Confidence            45778899999999999999999999999999987632      34678888888888876544222 122334567899


Q ss_pred             EEEECC-HHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCeEEEEeec
Q 032542           91 CIAIRD-VSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~d-~~~~~~~l~~~g~~~~~~----~---~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|.|+| ++++.++|+++|+++..+    .   ++.+.++++|||||.|||++..
T Consensus        77 ~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           77 CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             EEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999997 999999999999987532    1   2238999999999999999875

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.93  E-value=1.8e-25  Score=135.36  Aligned_cols=122  Identities=17%  Similarity=0.263  Sum_probs=94.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC-CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCC-CCCCCCccEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTC   91 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~hi~   91 (138)
                      ++++++|++|.|+|+++|++||+ +|||++.... .........+++..++..++++........... ...+.+++|++
T Consensus         4 M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hia   82 (133)
T 3hdp_A            4 MSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHIC   82 (133)
T ss_dssp             CCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEE
T ss_pred             cceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEE
Confidence            45789999999999999999999 9999987653 122334567788888889999876543221100 01146678999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |.|+|+++++++|+++|+++...      .++.+.+|++|||||+|||+|.
T Consensus        83 f~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           83 YEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            99999999999999999987532      3567899999999999999983

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.93  E-value=2.2e-24  Score=129.59  Aligned_cols=117  Identities=21%  Similarity=0.316  Sum_probs=92.9

Q ss_pred             ceeeeeeeEEEEe--CCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           13 YGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        13 ~~~~~l~hi~l~v--~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      |++.+++|+.|.|  +|++++++||+++|||++........ ....+|+..++..+.+.......        ..+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELK-KRGGCWFKCGNQEIHIGVEQNFN--------PAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGG-GGCCEEEEETTEEEEEEECTTCC--------CCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCccccc-CCCceEEEeCCEEEEEEecCCCC--------CCCceEE
Confidence            5688999999999  89999999999999999886532110 11346788888888877532211        1456899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeecC
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      +|.|+|+++++++|+++|+++..+  .++.+.++++|||||.|||.++.+
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            999999999999999999987654  456789999999999999998753

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.93  E-value=4.3e-25  Score=133.33  Aligned_cols=123  Identities=26%  Similarity=0.409  Sum_probs=94.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCC---CCCCCCccEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT   90 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~hi   90 (138)
                      ++.+++|+.|.|+|++++++||+++|||++.........+...+++..++..++++.......+...   .....+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            4789999999999999999999999999988654333334467788888888998876543321100   0124567899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCeEEEEee
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQV  136 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~--~DPdG~~~e~~~~  136 (138)
                      +|.|+|++++.++|+++|+++..+     .++.+.+++  +|||||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999999999999987533     335556666  8999999999973

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.93  E-value=5.5e-25  Score=133.90  Aligned_cols=124  Identities=23%  Similarity=0.172  Sum_probs=92.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |++++++|+.|.|+|++++++||+++|||++..........+..+++. ++..+.|......... .......+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~-~~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTD-LFDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSS-CCCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCccc-CCCCCCCCcceEEE
Confidence            578899999999999999999999999999886544222122334455 6778888876543211 11123355689999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeecC
Q 032542           93 AI---RDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        93 ~v---~d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      .|   +|++++.++|+++|+++..+  ...++.+|++|||||.|||.+..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   79999999999999987643  223389999999999999998753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.93  E-value=1.4e-24  Score=133.32  Aligned_cols=121  Identities=21%  Similarity=0.278  Sum_probs=92.4

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCc
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      .|++++++|+.|.|+|++++++||+++|||++.............+++..++    ..++|........    ...+.+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCCc
Confidence            4678899999999999999999999999999876543222223457777764    5788876543221    1223567


Q ss_pred             cEEEEEECCHHHHHHHHHHCCCeEEecCCCceEE-EEECCCCCeEEEEeec
Q 032542           88 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~-~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|+|+++++++|+++|+++..+ ++.+.+ +++|||||.|||.+..
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEcC
Confidence            899999999999999999999998776 566666 9999999999999753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.93  E-value=6e-24  Score=131.54  Aligned_cols=120  Identities=19%  Similarity=0.297  Sum_probs=92.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      ..|++.+++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+......... .......+..|+
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~-~~~~~~~g~~hi   89 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEP-KASRPTPGSADL   89 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSS-CCSSCCTTCCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCC-cCcCCCCCccEE
Confidence            34678999999999999999999999999999988632      35678888888888876543211 122234567899


Q ss_pred             EEEEC-CHHHHHHHHHHCCCeEEec----CC---CceEEEEECCCCCeEEEEeec
Q 032542           91 CIAIR-DVSKLKMILDKAGISYTLS----KS---GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~-d~~~~~~~l~~~g~~~~~~----~~---~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|.+. |+++++++|+++|+++..+    .+   +.+.+||+|||||.|||++..
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            99997 9999999999999987432    11   248899999999999999865

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.92  E-value=4.2e-24  Score=128.20  Aligned_cols=117  Identities=20%  Similarity=0.288  Sum_probs=90.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ++++|+.|.|+|++++++||+++|||++.........+...+++.. ++..++++........+  .....+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            4699999999999999999999999998876432223345667776 45688888765443221  11345678999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           95 RD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        95 ~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                      +|   +++++++|+++|+++..+    .++.+.++++|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence            98   889999999999998653    45668999999999999996

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.92  E-value=1.6e-24  Score=135.11  Aligned_cols=128  Identities=16%  Similarity=0.191  Sum_probs=99.1

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--------------CCCeeEEEEEeCCeEEEEeecCCCC
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPD   75 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~   75 (138)
                      .+...+++++||+|.|+|++++++||+++|||++.......              ......+++..++..++|++.....
T Consensus        12 ~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~   91 (159)
T 3gm5_A           12 KNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENP   91 (159)
T ss_dssp             SSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSS
T ss_pred             ccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCC
Confidence            34466789999999999999999999999999977543221              1345678888898999998764332


Q ss_pred             CCCCC--CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCC--CCeEEEEeec
Q 032542           76 PLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  137 (138)
Q Consensus        76 ~~~~~--~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPd--G~~~e~~~~~  137 (138)
                      .....  ...+.+++|++|.|+|+++++++|+++|+++...  ..+.+.+|+.|||  |++|||+|.+
T Consensus        92 ~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           92 STWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             CHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             ChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            10000  0124568899999999999999999999998643  4578899999999  9999999964

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.92  E-value=2.4e-25  Score=138.46  Aligned_cols=121  Identities=15%  Similarity=0.189  Sum_probs=82.2

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-C-e-EEEEeecCCCCCC-CC-CCCCCCCccE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-E-MIHLMELPNPDPL-SG-RPEHGGRDRH   89 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~l~~~~~~~~~-~~-~~~~~~~~~h   89 (138)
                      .|+|+|+.|.|+|+++|++||+++|||++....+...  .....+... + . .+.+......... +. ....+.+..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            4479999999999999999999999999876544222  122222221 1 1 2222221111100 00 0012345679


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           90 TCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        90 i~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++|.|+|+++++++|+++|+++..+   .++++.++|+|||||+|||+|..
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999998543   45568899999999999999964

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.92  E-value=2.9e-25  Score=138.88  Aligned_cols=125  Identities=18%  Similarity=0.286  Sum_probs=95.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCC--CCCCCCccEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT   90 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hi   90 (138)
                      +++++++||.|.|+|+++|++||+++|||++.........+...+++..++..++|+...........  ...+.++.|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            35678999999999999999999999999987754333334567888888889999876544311100  0124568899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCeEEEEeec
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~--~DPdG~~~e~~~~~  137 (138)
                      +|.|+|+++++++|+++|+++..+     .++.+.+|+  +||||+.|||++..
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~  137 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKK  137 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecC
Confidence            999999999999999999988543     234556666  49999999999865

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.92  E-value=2.6e-23  Score=125.94  Aligned_cols=118  Identities=22%  Similarity=0.355  Sum_probs=89.2

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      ++++|+.|.|+|++++++||+++|||++.............+++..++    ..+++........    ...+.+..|++
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~   76 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEE
Confidence            468999999999999999999999999887543222334556777653    5777765433221    12234567999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec----CCCc-eEEEEECCCCCeEEEEeec
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS----KSGR-PAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~----~~~~-~~~~~~DPdG~~~e~~~~~  137 (138)
                      |.|+|+++++++|+++|+++..+    ..+. +.++++|||||.|||.+..
T Consensus        77 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999999998643    3343 6789999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.92  E-value=4.5e-23  Score=125.30  Aligned_cols=112  Identities=22%  Similarity=0.375  Sum_probs=90.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      |+++++|+.|.|+|++++++||+++|||++....+      ...++..++..+.+......      +....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEE
Confidence            36789999999999999999999999999886532      23567778888887765321      1223557899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+  |++++.++|+++|+++..+ ..+++.++++|||||.|||.+..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            98  9999999999999988654 44678999999999999998754

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.92  E-value=2.1e-23  Score=128.55  Aligned_cols=119  Identities=18%  Similarity=0.276  Sum_probs=91.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      +.|++.+++||.|.|+|++++++||+++|||++....+      ...++..++..+.+........+. ......+..|+
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~-~~~~~~g~~~~   93 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPK-AAHPVPGSLDI   93 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CSSCCTTCCEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcc-cCCCCCCCceE
Confidence            34678999999999999999999999999999986433      235677788888887654332211 11223455789


Q ss_pred             EEEEC-CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           91 CIAIR-DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        91 ~~~v~-d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|.+. |+++++++|+++|+++...       .+..+.+||+|||||.|||.+.
T Consensus        94 ~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           94 CLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            99886 9999999999999987532       1223689999999999999874

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.91  E-value=3.5e-23  Score=127.80  Aligned_cols=125  Identities=14%  Similarity=0.223  Sum_probs=93.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC-----------CCCCeeEEEEEeCC--eEEEEeecCCCCCC-
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL-   77 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-   77 (138)
                      .+++++++|+.|.|+|++++++||++ |||++......           .......++++.++  ..++|+....+... 
T Consensus         6 ~~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~   84 (153)
T 1ss4_A            6 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIA   84 (153)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCC
T ss_pred             cccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcc
Confidence            34678999999999999999999999 99998754221           11233567777743  67888764322211 


Q ss_pred             -C-CCCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           78 -S-GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        78 -~-~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                       . .......+..|++|.|+|+++++++|+++|+++..+    .++.+.+|++|||||.|||++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence             0 011233456799999999999999999999988543    35778999999999999999864

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.91  E-value=5.9e-23  Score=125.62  Aligned_cols=115  Identities=23%  Similarity=0.370  Sum_probs=91.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      ++++++|+.|.|+|++++++||+++|||++.....      ..+++..++..+.+.......   ..+....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ---YVPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCC---CCCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCC---CCCCCCCCceEEEEE
Confidence            35789999999999999999999999999887543      236778888888887654221   112233557899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+  |++++.++|+++|+++..+ ..+++.++++|||||.|||.+..
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            97  9999999999999988654 44678999999999999999853

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.91  E-value=6.1e-23  Score=124.17  Aligned_cols=116  Identities=16%  Similarity=0.265  Sum_probs=87.7

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCe-eEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |+.+++|+.|.|+|++++++||+++|||++....+...... ...++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSLQ--------ERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSCC--------CCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCCC--------CCCeeEEEE
Confidence            35789999999999999999999999999876543211100 112677777777777532211        245689999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|+  |++++.++|+++|+++..+    .++++.++++|||||.|||.+..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            995  9999999999999998754    34678999999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.91  E-value=4.5e-23  Score=131.63  Aligned_cols=125  Identities=15%  Similarity=0.198  Sum_probs=93.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-------------------eEEEEeecCC
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   73 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~   73 (138)
                      ....+++|+.|.|+|++++++||+++|||++..........+..+++..++                   ..++|.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            345689999999999999999999999999987655444445666666543                   4677754432


Q ss_pred             CCCCC-CC----CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           74 PDPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        74 ~~~~~-~~----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..... ..    .....+..|++|.|+|+++++++|+++|+++...   ...++.+|++|||||.|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            21111 01    1122467899999999999999999999998765   22345789999999999999864

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.91  E-value=3.4e-23  Score=126.41  Aligned_cols=115  Identities=15%  Similarity=0.256  Sum_probs=87.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCe-eEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |+++++|+.|.|+|++++++||+++|||++........... ...++..++..+.+...+..      +  ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEE
Confidence            36789999999999999999999999999876543211110 11256778777888753221      1  245789999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+  |+++++++|+++|+++..+    +++.+.+|++|||||.|||.+.
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            999  9999999999999988654    3467899999999999999974

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.91  E-value=9.4e-24  Score=130.52  Aligned_cols=119  Identities=17%  Similarity=0.123  Sum_probs=90.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCC-CCCCCccEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC   91 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~hi~   91 (138)
                      |++++++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.|............+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            456789999999999999999999999999876531      356677788888887653210000000 1134568999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           92 IAI---RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        92 ~~v---~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |.|   +|+++++++|+++|+++..+    +++.+.++++|||||.|||.+.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   79999999999999987543    34668999999999999999864

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.91  E-value=7.3e-23  Score=125.41  Aligned_cols=111  Identities=28%  Similarity=0.471  Sum_probs=87.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..|++.+++||.|.|+|++++++||+++|||++....+..    ..+++..++  ..+.+......          .+..
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~----------~~~~   87 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSAR----RWNFLWVSGRAGMVVLQEEKEN----------WQQQ   87 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTT----TEEEEEETTTTEEEEEEECCSS----------CCCC
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCC----cEEEEEecCCCcEEEEeccCCC----------CCCc
Confidence            3477889999999999999999999999999998764321    346666653  57777755211          3457


Q ss_pred             EEEEEEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           89 HTCIAIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        89 hi~~~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      |++|.|+  |+++++++|+++|+++..+    .++.+.+||+|||||.|||++
T Consensus        88 h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           88 HFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            9999997  9999999999999988643    345789999999999999986

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.91  E-value=8.9e-24  Score=132.03  Aligned_cols=121  Identities=18%  Similarity=0.331  Sum_probs=92.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCC-C--CCCC-CCCCCc
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L--SGRP-EHGGRD   87 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--~~~~-~~~~~~   87 (138)
                      .|++.+++|+.|.|+|++++++||+++|||++......     ..+++..++..+.++....... .  ...+ ....+.
T Consensus         3 m~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~   77 (160)
T 3r4q_A            3 MKPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQ   77 (160)
T ss_dssp             -CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEE
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcce
Confidence            35678999999999999999999999999999876442     3467777887777765432211 0  0111 123456


Q ss_pred             cEEEEEE---CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v---~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|   +|+++++++|+++|+++..+   .++++.++++|||||.|||++.+
T Consensus        78 ~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           78 GHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            8999999   79999999999999988533   45789999999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.90  E-value=5.5e-23  Score=124.11  Aligned_cols=120  Identities=22%  Similarity=0.267  Sum_probs=89.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCCCCCCCCccE
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      .+++++++|+.|.|+|++++++||+++|||++........ +...+.+..+  +..+.+........    +...++..|
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~   82 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYTG   82 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc----ccCCCCeEE
Confidence            4567899999999999999999999999999987543111 1233334443  34667665432111    112245689


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+|+++++++|+++|+++..+    +++.+.++++|||||.|||+|.
T Consensus        83 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           83 ISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            9999999999999999999988643    4566999999999999999873

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.90  E-value=2.7e-22  Score=121.46  Aligned_cols=111  Identities=21%  Similarity=0.189  Sum_probs=86.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      +.+++|+.|.|+|++++++||+++|||++....+      ..+.+.. ++..+.++....+.     +...++..|++|.
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~   79 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceEEEE
Confidence            3589999999999999999999999999876543      2344554 45678887654111     1223456899999


Q ss_pred             ECC---HHHHHHHHHH---CCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IRD---VSKLKMILDK---AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~d---~~~~~~~l~~---~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+|   +++++++|++   +|+++..+    ..| +.++++|||||.|||.+++
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g-~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG-RTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE-EEEEEECTTCCEEEEEECC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce-EEEEEECCCCCEEEEEeCC
Confidence            986   9999999999   99988643    334 8999999999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.90  E-value=1.7e-22  Score=124.78  Aligned_cols=114  Identities=19%  Similarity=0.222  Sum_probs=85.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++++++|+.|.|+|++++++||+++|||++....+      ..+++.. ++..+.++........   +....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEE
Confidence            35689999999999999999999999999877543      3456776 6678888765433211   122344579999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|+|   +++++++|+++|+++..+    ..| +.++++|||||.|||++..
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G-~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG-YTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC-cEEEEECCCCCEEEEEEcC
Confidence            9987   999999999999988533    344 8999999999999999865

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.90  E-value=1.2e-23  Score=129.24  Aligned_cols=126  Identities=15%  Similarity=0.247  Sum_probs=92.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC------eEEEEeecCCCCCCCC-C-CCC
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG-R-PEH   83 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~-~-~~~   83 (138)
                      +.++.+++|+.|.|+|++++++||+++|||++.........+...+++..++      ..++|++......... . ...
T Consensus         4 ~~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   83 (148)
T 1jc4_A            4 EDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKH   83 (148)
T ss_dssp             CCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHT
T ss_pred             cCccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhC
Confidence            3456789999999999999999999999999876543222234567788876      6788887554321100 0 012


Q ss_pred             C--CCccEEEEEECCHHHHHHHHHHCCCeEE-ec----CCCceEEEE--ECCCCCeEEEEeec
Q 032542           84 G--GRDRHTCIAIRDVSKLKMILDKAGISYT-LS----KSGRPAIFT--RDPDANALEFTQVD  137 (138)
Q Consensus        84 ~--~~~~hi~~~v~d~~~~~~~l~~~g~~~~-~~----~~~~~~~~~--~DPdG~~~e~~~~~  137 (138)
                      +  .+..|++|.|+|+++++++|+++|+++. ..    .++.+.+++  +|||||.|||++.+
T Consensus        84 ~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           84 NGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            2  4568999999999999999999999876 22    234456666  99999999999864

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.90  E-value=2.8e-22  Score=120.96  Aligned_cols=111  Identities=18%  Similarity=0.272  Sum_probs=81.3

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEE-eCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ..|+||.|.|+|++++++||++ |||++........   ..+++. .++..+.+.......      ....+..|++|.|
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f~v   74 (128)
T 3g12_A            5 LLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKG---SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGFQI   74 (128)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCC---CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEEEe
Confidence            4699999999999999999999 9999876522111   234555 577777775443311      1123346899999


Q ss_pred             CCHHHHHHHHHHCCCe-EEe-c---CCCceEEEEECCCCCeEEEEeec
Q 032542           95 RDVSKLKMILDKAGIS-YTL-S---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~d~~~~~~~l~~~g~~-~~~-~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|+++++++|+++|++ +.. +   ++|.+ ++|+|||||.|||.+..
T Consensus        75 ~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~  121 (128)
T 3g12_A           75 TDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELE  121 (128)
T ss_dssp             SCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC--
T ss_pred             CCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEec
Confidence            9999999999999999 542 2   45666 99999999999999864

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.90  E-value=2.8e-22  Score=119.06  Aligned_cols=111  Identities=17%  Similarity=0.231  Sum_probs=84.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      ++++|+.|.|+|++++++||+++|||++....+      ..+++..++..+.+... ...+  . ...+. ..|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~-~~~~--~-~~~~~-~~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQN-HLVP--L-ENFQS-GIIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESS-CSSS--C-CCCCS-CEEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcC-CCCC--c-ccCCC-eEEEEEEEC
Confidence            479999999999999999999999999875322      24567777776655321 1111  0 11122 358999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+++++++|+++|+++..+    +++.+.++++|||||.|||++.+
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999987432    45678999999999999999853

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.90  E-value=6.1e-22  Score=118.72  Aligned_cols=109  Identities=12%  Similarity=0.149  Sum_probs=85.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      +.....|+.|.|+|++++++||+++|||++....+      ..+++..++..+++.......        .++..|++|.
T Consensus         2 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~   67 (124)
T 1xrk_A            2 AKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVW   67 (124)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEE
T ss_pred             CcccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEE
Confidence            34456889999999999999999999999987522      345677788888887643211        1234699999


Q ss_pred             ECCHHHHHHHHHHC------CC--eEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           94 IRDVSKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~d~~~~~~~l~~~------g~--~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+|+++++++|+++      |+  ++..+    ++| +.++++|||||.|||.+..
T Consensus        68 v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           68 VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC-
T ss_pred             ECCHHHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEec
Confidence            99999999999999      99  66533    345 8999999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.90  E-value=1.7e-22  Score=123.15  Aligned_cols=119  Identities=20%  Similarity=0.251  Sum_probs=88.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCC--CCCCCCCCCCCccEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHTC   91 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~--~~~~~~~~~~~~~hi~   91 (138)
                      ++++.|+.|.|+|++++++||++ |||++....+..    ..+.+.. ++..+.++......  .+...+....+..|++
T Consensus         2 ~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~   76 (138)
T 2a4x_A            2 SARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIA   76 (138)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEEE
Confidence            46899999999999999999998 999987754311    2344555 56678877532100  0000112235678999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeecC
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      |.|+   |+++++++|+++|+++..+    .+|.+.++++|||||.|||.+..|
T Consensus        77 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  130 (138)
T 2a4x_A           77 FEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  130 (138)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCCc
Confidence            9999   9999999999999987643    456789999999999999998754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.89  E-value=2.7e-22  Score=127.79  Aligned_cols=126  Identities=16%  Similarity=0.197  Sum_probs=90.5

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-------------------CeEEEEeecC
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELP   72 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~l~~~~   72 (138)
                      .+.+++++|+.|.|+|++++++||+++|||++..........+...++..+                   +..++|+...
T Consensus        26 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~  105 (184)
T 2za0_A           26 STKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNW  105 (184)
T ss_dssp             GGTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEET
T ss_pred             CccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecC
Confidence            345778999999999999999999999999987653222222334445542                   3577777643


Q ss_pred             CCCCCCC--C---CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           73 NPDPLSG--R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        73 ~~~~~~~--~---~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .....+.  .   .....+..|++|.|+|+++++++|+++|+++..+   ..+.+.+||+|||||.|||++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          106 GTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TGGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            3111000  0   0112456899999999999999999999998754   22456899999999999999854

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.89  E-value=1.5e-21  Score=118.38  Aligned_cols=112  Identities=22%  Similarity=0.261  Sum_probs=84.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .++++|+.|.|+|++++++||+++|||++....+      ..+.+..++..+.+........    + ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~----~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDR----E-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCS----S-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCcccc----c-CCCCCCeEEEEE
Confidence            4579999999999999999999999999965433      2345665555566655433221    1 224467999998


Q ss_pred             C---CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEeec
Q 032542           95 R---DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +   |+++++++|+++|+++..+        .++.+.+||+|||||.|||.+..
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   5999999999999987432        33457899999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.89  E-value=2.5e-22  Score=119.34  Aligned_cols=109  Identities=17%  Similarity=0.212  Sum_probs=81.6

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC---eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .|++.++ |+.|.|+|++++++||+++|||++.....      ..+++..++   ..+.+.....         ...+..
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~   66 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG---------SGTDVP   66 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB---------TTBCCC
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC------EEEEEecCCCCcEEEEEEcCCC---------CCCcee
Confidence            3678889 99999999999999999999999876421      223444442   2344442211         113357


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|.|+|++++.++|+++|+++..+    ++|.+.++++|||||.|||.+.
T Consensus        67 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           67 DLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            99999999999999999999987432    3466899999999999999985

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.89  E-value=1.9e-21  Score=118.29  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=86.7

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCcc-EEEEEECCH
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV   97 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-hi~~~v~d~   97 (138)
                      ..+.|.|+|++++++||+++|||++....+.. .....+.+..++..+.+.........   ...++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            46889999999999999999999998764433 22235667777778877654322111   11122334 999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           98 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        98 ~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++++++|+++|+++..+    +++.+.++++|||||.|||.+..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999987543    55779999999999999999864

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.88  E-value=9.5e-22  Score=120.86  Aligned_cols=114  Identities=16%  Similarity=0.227  Sum_probs=87.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      .++.|+.|.|+|++++++||+++|||++....+      ..+++..+ +..+.|+......+   .+....+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEP---KASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSS---CCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCC---ccCCCCCceEEEEEe
Confidence            489999999999999999999999999876542      23566665 46788875443211   112235678999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeecC
Q 032542           95 R---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      +   |+++++++|+++|+++..+   ...++.++++|||||.|||+++.+
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            7   5899999999999987543   223489999999999999998753

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.88  E-value=9.9e-22  Score=121.02  Aligned_cols=118  Identities=19%  Similarity=0.246  Sum_probs=89.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHH---HHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccE
Q 032542           13 YGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy---~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      +.+.+++|+.|.|+|++++++||   +++|||++....+.     ...|+. ++..+.|+................+..|
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~h   89 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNH   89 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCCE
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCceE
Confidence            55678999999999999999999   99999998875432     124666 7778888765431110011112245689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEec-----C--CCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIR---DVSKLKMILDKAGISYTLS-----K--SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~---d~~~~~~~l~~~g~~~~~~-----~--~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+   |+++++++|+++|+++..+     .  ++.+.+|++|||||.|||+++
T Consensus        90 i~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           90 LAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            999999   9999999999999988652     1  246789999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.88  E-value=1.7e-21  Score=118.27  Aligned_cols=109  Identities=22%  Similarity=0.283  Sum_probs=81.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHH
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS   98 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~   98 (138)
                      .+..|.|+|++++++||+++|||++....+      ..+++..++..+.+........   .+. ..+..|++|.|+|++
T Consensus         9 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~-~~~~~~l~~~v~dv~   78 (134)
T 3fcd_A            9 ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPD-GIARVAICIDVSDID   78 (134)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSCHH
T ss_pred             ceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCC-CCceEEEEEEeCCHH
Confidence            345799999999999999999999987643      3577888888888877654321   111 223479999999999


Q ss_pred             HHHHHHHHCCC----eEE----ecCCCceEEEEECCCCCeEEEEeec
Q 032542           99 KLKMILDKAGI----SYT----LSKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        99 ~~~~~l~~~g~----~~~----~~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +++++|+++|+    ++.    ..+++.+.++++|||||.|||.+..
T Consensus        79 ~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           79 SLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            99999997654    222    2256779999999999999999865

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.88  E-value=5.2e-22  Score=122.11  Aligned_cols=114  Identities=14%  Similarity=0.239  Sum_probs=83.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |++.++. +.|.|+|++++++||+++|||++............  ....++  +.++.......      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~--~~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVE--LAQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCE--EEEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEE--EEEecc--EEEecCCcccC------CCCcceEEEE
Confidence            5677888 99999999999999999999998766432222222  233343  44443321110      1123479999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|+|++++.++|+++|+++..+   ...++.++++|||||.|||++..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            9999999999999999988543   23348999999999999999865

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.88  E-value=3.4e-21  Score=117.74  Aligned_cols=114  Identities=18%  Similarity=0.144  Sum_probs=84.3

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecC-----CCCCCCCCCCCCCCccEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP-----NPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~hi~   91 (138)
                      +++|+.|.|+|++++++||+++|||++.......    ..+++..++..+.+....     .....  ....+.+ .|++
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~-~~~~   80 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQF--SETSGIK-FLLN   80 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGG--CCCBSCC-EEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCcccccccccccc--CCCCCCe-EEEE
Confidence            8999999999999999999999999987543211    234566666666664321     10000  0111233 5999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |.|+   |++++.++|+++|+++..+    +++.+.++|+|||||.|||.+..
T Consensus        81 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           81 FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            9999   5999999999999987543    45689999999999999999864

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.88  E-value=7.2e-22  Score=121.96  Aligned_cols=118  Identities=14%  Similarity=0.108  Sum_probs=84.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCC--CCCCCCccEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCI   92 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~hi~~   92 (138)
                      ..++.|+.|.|+|++++++||+++|||++... +.    ...+++..++..+.|............  .....+ .|++|
T Consensus        23 ~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~l~f   96 (148)
T 2r6u_A           23 TGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-PD----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PVVTV   96 (148)
T ss_dssp             CCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-TT----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CEEEE
T ss_pred             CCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-CC----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EEEEE
Confidence            36899999999999999999999999998873 11    134667776654333322211100000  000123 49999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeecC
Q 032542           93 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      .|+|+++++++|+++|+++..+    ++.++.++++|||||.|||++..+
T Consensus        97 ~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           97 DVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             ECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            9999999999999999998643    223589999999999999998753

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.88  E-value=7.2e-21  Score=117.35  Aligned_cols=120  Identities=13%  Similarity=0.124  Sum_probs=81.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCC---CCCCCCCCCCCCCccEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~hi~   91 (138)
                      ..+|.||+|.|+|+++|++||++ ||+..........   ...+...++..+.+.....   ............+..|++
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   82 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVC   82 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEE
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEE
Confidence            45789999999999999999998 5665554443222   2222333445554443221   111111122334557999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeecC
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      |.|+   +++++++++++.|+.+..+   .++++++||+|||||+|||+..+|
T Consensus        83 ~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           83 VSAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            9996   5788899999999988644   557789999999999999997654

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.87  E-value=1.5e-21  Score=116.66  Aligned_cols=104  Identities=17%  Similarity=0.193  Sum_probs=82.4

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      -.++.|.|+|++++++||+++|||++....+      ..+++..++..+++.......        .+...|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI--------VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH--------HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCCC--------CCCceEEEEEECCH
Confidence            4578899999999999999999999986521      346677788888887543211        12236999999999


Q ss_pred             HHHHHHHHHC------CC--eEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           98 SKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        98 ~~~~~~l~~~------g~--~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++++++|+++      |+  ++..+    ++| +.++++|||||.|||.++
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999999999      99  66543    345 899999999999999985

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.87  E-value=1.3e-20  Score=113.09  Aligned_cols=106  Identities=19%  Similarity=0.246  Sum_probs=83.6

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCH
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV   97 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~   97 (138)
                      ..++.|.|+|++++++||++ |||++.....      ..+++..++..++|...+...       ...+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLD-------PLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCC-------GGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCCC-------CCCcceEEEEEECCH
Confidence            45788999999999999998 9999986521      346677788888887643311       113457999999999


Q ss_pred             HHHHHHHHHCCCeE-------E-ec---CCCceEEEEECCCCCeEEEEeec
Q 032542           98 SKLKMILDKAGISY-------T-LS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        98 ~~~~~~l~~~g~~~-------~-~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++++++|+++|+++       . .+   ++|.+.++++|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       2 22   44668999999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.87  E-value=3.1e-21  Score=113.63  Aligned_cols=106  Identities=15%  Similarity=0.227  Sum_probs=82.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ++++|+.|.|+|++++++||+++|||++.....  .   ..+++..+ +..+.+.......        ..+..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG--N---AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET--T---TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC--C---cEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            469999999999999999999999999876432  1   34666664 3567776543211        13468999999


Q ss_pred             ---CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEE
Q 032542           95 ---RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        95 ---~d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~  134 (138)
                         +|++++.++|++.|+++..+ ..+++.++++|||||.||++
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence               78999999999999987544 11278999999999999997

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.85  E-value=2.8e-20  Score=128.51  Aligned_cols=122  Identities=16%  Similarity=0.251  Sum_probs=91.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-CCCeeEEEEEeC----CeEEEEeecCCCCCCCCCCCCCCCc
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      |++.+|+||+|.|+|++++++||+++|||++....... .......++...    +..+.++..+....  . ....+++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~-~~~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--G-VIGDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--C-BCCBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--C-CCCCCce
Confidence            56889999999999999999999999999988753211 111122333322    35788876643321  1 1123457


Q ss_pred             cEEEEEEC--CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAIR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~--d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|+  |++++.++|+++|+++... ..+.+.+||+|||||.|||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  9999999999999987643 56788999999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.85  E-value=2.9e-20  Score=128.48  Aligned_cols=118  Identities=16%  Similarity=0.165  Sum_probs=89.1

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+.+|+||+|.|+|++++.+||+++|||+......      ..+.+..++  ..+++...+...  ... ...++++
T Consensus       147 ~~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~--~~~-~g~g~~~  217 (335)
T 3oaj_A          147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIG--RGQ-MGAGTVH  217 (335)
T ss_dssp             TTTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCC--BCB-CSBTEEE
T ss_pred             hhhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCC--cCC-CCCcceE
Confidence            45678999999999999999999999999999987533      123344442  467776543221  111 2234678


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           89 HTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        89 hi~~~v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+||.|+|   ++++.++|++.|+++...  +...+++||+||+|+.||+.+..
T Consensus       218 HiAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          218 HIAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            99999997   666899999999987544  55678999999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.85  E-value=3.3e-21  Score=117.63  Aligned_cols=114  Identities=18%  Similarity=0.155  Sum_probs=79.9

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEE-----eec-CCCCCCCCCCCCCCCc
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGRD   87 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~-~~~~~~~~~~~~~~~~   87 (138)
                      .+++++|+.|.|+|++++++||+++|||++....+      ..+.+. .+..+..     ... +....  .....+.+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~~   75 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRRN   75 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSS
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe-ccceeccCchhhhhccccCCc--cccccCCCc
Confidence            45679999999999999999999999999876432      122332 2333331     110 00110  111223467


Q ss_pred             cEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|+|++++.++|++ |+++..+    ++|.+.++++|||||.|||.+..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 9987532    45668999999999999999863

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.84  E-value=6.5e-20  Score=122.11  Aligned_cols=108  Identities=19%  Similarity=0.243  Sum_probs=87.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      .+++++||.|.|+|++++++||+++|||++.....      ..+++..++..+.|...+..         ..+..|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEEEE
Confidence            35689999999999999999999999999887644      34678888888887764322         1346899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEe---------cCCCceEEEEECCCCCeEEEEeec
Q 032542           94 IR--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~---------~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+  +++++.++|+++ +++..         ..++.+.+||+|||||.+||++..
T Consensus        88 V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           88 IAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             ECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             ecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            86  699999999999 88754         145789999999999999999854

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.84  E-value=2.6e-20  Score=113.55  Aligned_cols=116  Identities=12%  Similarity=0.140  Sum_probs=81.5

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ...||.|.|+|++++++||+++|||++...... ......+++..++.  .+++........    ...+.+..|++|.|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~v   85 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYV   85 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEEC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEEe
Confidence            467788899999999999999999998765331 12234566666543  456654433211    12234568999999


Q ss_pred             CCH---HHHHHHHHHCCCeEEe--c-CCCceEEEEECCCCCeEEEEeec
Q 032542           95 RDV---SKLKMILDKAGISYTL--S-KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~d~---~~~~~~l~~~g~~~~~--~-~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|+   ++++++|+++|+++..  . ..+....||+|||||.|||++..
T Consensus        86 ~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           86 PNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            999   9999999999999873  2 11111136999999999999753

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.84  E-value=6.7e-20  Score=112.51  Aligned_cols=114  Identities=18%  Similarity=0.238  Sum_probs=81.3

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCC-C---CCCCCCCCCccEEEEEE
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~---~~~~~~~~~~~hi~~~v   94 (138)
                      -.+.|.|+|++++++||+++|||++.......    ..+++..++..+.|........ .   ......+.+. +++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTTE-EEEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCce-EEEEEE
Confidence            34789999999999999999999987532211    3466777888888876521111 0   0111222333 499999


Q ss_pred             CCHHHHHHHHHH-CCCeEEec-----------CCCceEEEEECCCCCeEEEEeec
Q 032542           95 RDVSKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~d~~~~~~~l~~-~g~~~~~~-----------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|+++++++|++ +|+++..+           .++++.++|+|||||.|||.+..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 99987532           23458899999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.83  E-value=1.5e-19  Score=124.95  Aligned_cols=131  Identities=15%  Similarity=0.190  Sum_probs=91.0

Q ss_pred             ecceeccCCc-eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-CCeeEEEEEeC----CeEEEEeecCCCCCC
Q 032542            4 NLLFHICLDY-GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPL   77 (138)
Q Consensus         4 n~~~~~~~~~-~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~~----~~~~~l~~~~~~~~~   77 (138)
                      +..|-...+| ++++++||.|.|+|++++++||+++|||++........ ......++..+    +..+.+...+.... 
T Consensus        16 ~~~~~~~~~m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~-   94 (338)
T 1zsw_A           16 ENLYFQSNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR-   94 (338)
T ss_dssp             TTCCCSSCCSSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB-
T ss_pred             cccCCCcCccCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc-
Confidence            3344444445 58899999999999999999999999999876531111 00111223322    34666665432211 


Q ss_pred             CCCCCCCCCccEEEEEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           78 SGRPEHGGRDRHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        78 ~~~~~~~~~~~hi~~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                        ......+..|++|.|+   |+++++++|+++|+++..+  ..|.+.++|+|||||.|||++..
T Consensus        95 --~~~~~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A           95 --TYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             --CBCCBSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             --CcCCCCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence              1112245689999998   6999999999999988654  34568999999999999999864

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.83  E-value=2.2e-19  Score=110.62  Aligned_cols=115  Identities=14%  Similarity=0.123  Sum_probs=76.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeecc-CCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCC-------
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG-------   85 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------   85 (138)
                      .++++.|+.|.|+|++++++||+++|||++... .....    ..++  + ..+++. ...+.... ....+.       
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~--g-~~l~l~-~~~~~~~~-~~~~~~~~~~g~~   88 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG----FGDY--G-CVFDYP-SEVAVAHL-TPFRGFHLFKGEP   88 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS----CEEE--E-EEESSC-TTTTSCC---CCCSEEEEESCC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC----ccEE--c-cEEEEe-ccCCCccc-ccccccceeeccC
Confidence            467899999999999999999999999998531 11111    1223  2 223330 11111110 000000       


Q ss_pred             CccEEEE-EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           86 RDRHTCI-AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        86 ~~~hi~~-~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ...+.+| .|+|+++++++|+++|+++..+    +++.+.++++|||||.|||.++.
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            1112255 9999999999999999987543    45678999999999999999864

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.83  E-value=8.8e-20  Score=126.23  Aligned_cols=116  Identities=14%  Similarity=0.179  Sum_probs=88.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccE
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      .+.+.+++|+.|.|+|++++++||+++|||++..... .......+|+..++.  .+.+......        ..++..|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeE
Confidence            4578899999999999999999999999999887644 222234567776543  4555542111        1245799


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d---~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+|   ++++.++|+++|+++..+     .+..+++|++||+||.||+++.
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            9999998   888899999999998643     2235779999999999999853

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.82  E-value=3.1e-19  Score=123.38  Aligned_cols=117  Identities=11%  Similarity=0.118  Sum_probs=85.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC--Ce--EEEEeecCCCCCCCCCCCCCCC
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AE--MIHLMELPNPDPLSGRPEHGGR   86 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~--~~~l~~~~~~~~~~~~~~~~~~   86 (138)
                      ..+++++++|+.|.|+|++++++||+++|||++.....      ..+.+..+  +.  .+..+.. ...  .. ....++
T Consensus       174 ~~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~-~~~--~~-~~~~~~  243 (338)
T 1zsw_A          174 AKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND------QEAIFQSIKGEAFGEIVVKYL-DGP--TE-KPGRGS  243 (338)
T ss_dssp             GGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEESSTTCSTTCEEEEEC-CSS--BC-BCCBTC
T ss_pred             ccccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC------CeEEEEecCCCCceEEEEecc-CCC--CC-CCCCCc
Confidence            45778899999999999999999999999999887543      12334442  22  3333322 111  01 111245


Q ss_pred             ccEEEEEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           87 DRHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        87 ~~hi~~~v~---d~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..|++|.|+   |+++++++|+++|+++..+  .++.+.+||+|||||.|||++..
T Consensus       244 ~~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          244 IHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             eEEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            689999998   6999999999999988533  45678899999999999999753

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.81  E-value=3.6e-19  Score=120.90  Aligned_cols=108  Identities=16%  Similarity=0.146  Sum_probs=83.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +++|+||.|.|+|++++++||+++|||++.....      ..+++..++..+.+...+..         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            6789999999999999999999999999887532      23566665542222222111         13568999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEeec
Q 032542           95 R---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +   |+++++++|+++|+++...       .++.+.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            8   9999999999999987643       25678999999999999999854

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.81  E-value=3.6e-19  Score=121.59  Aligned_cols=115  Identities=17%  Similarity=0.275  Sum_probs=85.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-CCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCcc
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+.+.+++|+.|.|+|++++++||+++|||++........ ......|+..++.  .+.+...+          ..++..
T Consensus       146 ~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  215 (309)
T 3hpy_A          146 GIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP----------EKGKLH  215 (309)
T ss_dssp             SSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS----------STTEEE
T ss_pred             CcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC----------CCCcee
Confidence            4678899999999999999999999999999876543221 2235567776543  23333211          124578


Q ss_pred             EEEEEECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~---~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|.|+|+++   ++++|+++|+++...     .++.+++|++|||||+||+...
T Consensus       216 Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          216 HCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            99999997665   578999999987543     2346789999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.81  E-value=3.6e-19  Score=124.20  Aligned_cols=118  Identities=19%  Similarity=0.212  Sum_probs=89.4

Q ss_pred             eeecceeccCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe----EEEEeecCCCCCC
Q 032542            2 VVNLLFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPL   77 (138)
Q Consensus         2 ~~n~~~~~~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~   77 (138)
                      =+++.....+...|++|+||.|.|+|++++++||+++|||++..+.+      ..++++.++.    .+.+...  .   
T Consensus         2 s~~~P~P~~P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~--~---   70 (365)
T 4ghg_A            2 SNEIPKPVAPAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG--P---   70 (365)
T ss_dssp             -CCCCCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC--S---
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC--C---
Confidence            34445555556678999999999999999999999999999987643      4466766432    2333211  1   


Q ss_pred             CCCCCCCCCccEEEEEEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           78 SGRPEHGGRDRHTCIAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        78 ~~~~~~~~~~~hi~~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                            ..++.|++|.|.   +++++.++|++.|+.+...     +.+++.++|+||||+.+||+..
T Consensus        71 ------~~gl~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~  131 (365)
T 4ghg_A           71 ------VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFE  131 (365)
T ss_dssp             ------SCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             ------CCCcceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEE
Confidence                  245789999997   5888899999999998653     3457899999999999999853

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.81  E-value=4.4e-19  Score=120.83  Aligned_cols=111  Identities=17%  Similarity=0.147  Sum_probs=84.5

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCc
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      ++.|++++++|+.|.|+|++++++||+++|||++.....  .   ...|+..++  ..+.+...  .         ..+.
T Consensus         2 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~--~---------~~~~   65 (302)
T 2ehz_A            2 SKQAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHN--G---------QDDL   65 (302)
T ss_dssp             --CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESS--C---------CSEE
T ss_pred             CCcccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecC--C---------CCCe
Confidence            456889999999999999999999999999999986532  1   235666543  23433321  1         1346


Q ss_pred             cEEEEEEC---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEee
Q 032542           88 RHTCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        88 ~hi~~~v~---d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|++|.|+   |++++.++|+++|+++...+       ++++.++|+|||||.|||++.
T Consensus        66 ~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           66 EYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             eEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            79999995   78999999999999876542       457889999999999999975

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.81  E-value=3.2e-19  Score=121.27  Aligned_cols=107  Identities=17%  Similarity=0.175  Sum_probs=82.7

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeec-cCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      |++++++|+.|.|+|++++++||+++|||++.. ...      ..+++..++.  .+.+...  .         ..+..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~--~---------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPG--E---------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEEC--S---------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecC--C---------CCCcce
Confidence            567899999999999999999999999999876 322      2355666543  3333321  1         144679


Q ss_pred             EEEEECC---HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRD---VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d---~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|++   +++++++|+++|+++...       +++.+.++|+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            9999974   888999999999988643       2567899999999999999986

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.81  E-value=6.3e-19  Score=121.17  Aligned_cols=114  Identities=17%  Similarity=0.202  Sum_probs=85.7

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ..+.+++++|+.|.|+|++++++|| ++|||++..............|+..++  ..+.+...+           +.+++
T Consensus       146 ~~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~  213 (323)
T 1f1u_A          146 SAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMH  213 (323)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEE
T ss_pred             CCCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCce
Confidence            3467889999999999999999999 999999876543222222455666643  234443211           12578


Q ss_pred             EEEEEECCHHH---HHHHHHHCCC--eEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~---~~~~l~~~g~--~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|.|+|+++   +.++|+++|+  ++..+     .++.+++|++||+||.||+.+.
T Consensus       214 Hiaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (323)
T 1f1u_A          214 HVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  271 (323)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999999998   9999999999  87642     3456789999999999999863

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.81  E-value=1e-18  Score=119.38  Aligned_cols=109  Identities=19%  Similarity=0.220  Sum_probs=84.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CC---eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      |++++++||.|.|+|++++++||+++|||++......     ..+++.. ++   ..+.+....           ..+..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREAD-----------TAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS-----------SCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCC-----------CCcee
Confidence            5688999999999999999999999999998876421     2355654 33   234443221           13578


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEeec
Q 032542           89 HTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        89 hi~~~v~d---~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |++|.|++   ++++.++|+++|+++...     +++++.+||+|||||.|||++..
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            99999986   999999999999988653     35678999999999999998753

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.81  E-value=3.1e-19  Score=120.93  Aligned_cols=108  Identities=13%  Similarity=0.142  Sum_probs=83.0

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +++++||.|.|+|++++++||+++|||++.....      ..++++.++..+.+......         ..+..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            5789999999999999999999999999887532      23556665432222221111         13467999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEeec
Q 032542           95 R---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +   |++++.++|+++|+++...       +++.+.++|+|||||.+||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   8999999999999987653       25678899999999999999753

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.80  E-value=1e-18  Score=119.12  Aligned_cols=108  Identities=17%  Similarity=0.222  Sum_probs=85.1

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      |++++++|+.|.|+|++++++||+++|||++.....  .   ..+++..++  ..+.+....           ..+..|+
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~   65 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYI   65 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEE
Confidence            457899999999999999999999999999886221  1   245666665  456664221           1346899


Q ss_pred             EEEEC---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           91 CIAIR---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        91 ~~~v~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|.|+   |++++.++|+++|+++...       .++.+.++++|||||.|||++.
T Consensus        66 ~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           66 GWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            99997   6999999999999987643       2457889999999999999876

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.80  E-value=1.1e-18  Score=118.90  Aligned_cols=115  Identities=16%  Similarity=0.268  Sum_probs=82.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccE
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      .+.+++++|+.|.|+|++++++||+++|||++..............|+..++  ..+.+...+          ..+...|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~h  214 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHH  214 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceE
Confidence            4678899999999999999999999999999876532111111234555542  234443211          1133689


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+   ++++++++|+++|+++..+     .+.++.+|++|||||.|||.+.
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999999   5667789999999987532     2236789999999999999985

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.79  E-value=6.8e-18  Score=114.13  Aligned_cols=114  Identities=15%  Similarity=0.124  Sum_probs=82.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      ..+.|+.|.|+|++++++||+++|||++.........  ..+.+..++..+..+ ....      +.......|++|.|+
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGC-MEPP------MPGVPNHWHVYFAVD  233 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCS------STTCCSEEEEEEECS
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeee-cCCC------CCCCCCeEEEEEEeC
Confidence            4689999999999999999999999998864311111  234455555443322 2211      111233468999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeecC
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      |+++++++++++|+++..+    +++++.++++|||||.|+|++..+
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999999999999998543    456899999999999999999754

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.79  E-value=1.3e-18  Score=120.07  Aligned_cols=117  Identities=12%  Similarity=0.067  Sum_probs=85.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-----------CCCeeEEEEEeC----CeEEEEeecCCCCC
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG----AEMIHLMELPNPDP   76 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-----------~~~~~~~~~~~~----~~~~~l~~~~~~~~   76 (138)
                      .|+++++.|++|.|+|++++++||+++|||++.......           ......+++..+    ...++|....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            466789999999999999999999999999987654322           222345556553    2356665533221 


Q ss_pred             CCCCCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEeec
Q 032542           77 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        77 ~~~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                         ....+.++.|++|.|+|+   .++++++|+++...+  .+.+|++||||+.|||++..
T Consensus       101 ---~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~--~~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 ---DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA--EGVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             ---CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE--TTEEEEECTTSCEEEEESSC
T ss_pred             ---ccccCCCeeEEEEECchH---HHHHHHcCCceeccC--CceEEEECCCCCEEEEEecC
Confidence               112345789999999987   667888999887544  24899999999999999854

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.79  E-value=2.4e-18  Score=119.08  Aligned_cols=109  Identities=13%  Similarity=0.239  Sum_probs=84.8

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CC---eEEEEeecCCCCCCCCCCCCCCC
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR   86 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~   86 (138)
                      +.+.+++++||.|.|+|++++++||+++|||++.....      ..+++.. ++   ..+.+....           ..+
T Consensus         5 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g   67 (339)
T 3lm4_A            5 ARFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAG   67 (339)
T ss_dssp             GGGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCE
T ss_pred             CCCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCC
Confidence            45678999999999999999999999999999887632      2355555 22   123332211           234


Q ss_pred             ccEEEEEECC---HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEee
Q 032542           87 DRHTCIAIRD---VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        87 ~~hi~~~v~d---~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ..|++|.|+|   ++++.++|+++|+++...   .++++.++|+|||||.|||+..
T Consensus        68 ~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           68 MGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             cceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            7899999997   889999999999998654   4457899999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.79  E-value=3.5e-18  Score=117.44  Aligned_cols=110  Identities=19%  Similarity=0.221  Sum_probs=86.5

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CC---eEEEEeecCCCCCCCCCCCCCCC
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR   86 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~---~~~~l~~~~~~~~~~~~~~~~~~   86 (138)
                      +.+++++++|+.|.|+|++++++||+++|||++.....      ..++++. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            66789999999999999999999999999999877532      3456664 32   244443211           134


Q ss_pred             ccEEEEEE---CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEeec
Q 032542           87 DRHTCIAI---RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        87 ~~hi~~~v---~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..|++|.|   +|++++.++|+++|+++...     +++++.++|+||+|+.+||++..
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~  132 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  132 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEec
Confidence            67999999   68999999999999988654     24578999999999999998753

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.79  E-value=2.6e-18  Score=116.82  Aligned_cols=113  Identities=12%  Similarity=0.230  Sum_probs=82.4

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC---------CCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCC
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPE   82 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~---------~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~   82 (138)
                      .+++++|+.|.|+|++++++||+++|||++.......         .......|+..++  ..+.+...  +        
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------  208 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPM--P--------  208 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESS--C--------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecC--C--------
Confidence            4578999999999999999999999999986432111         1012446666643  23444421  1        


Q ss_pred             CCCCccEEEEEECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           83 HGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        83 ~~~~~~hi~~~v~d~~~---~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ...+..|++|.|+|+++   ++++|+++|+++..+     .+.++++|++|||||.|||.+.
T Consensus       209 ~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            12456899999998665   599999999988643     2347789999999999999864

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.78  E-value=1.8e-18  Score=117.94  Aligned_cols=109  Identities=17%  Similarity=0.174  Sum_probs=83.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      ++++++|+.|.|+|++++++||+++|||++......     ..+++..++  ..+.+......         ..+..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEE
Confidence            478999999999999999999999999999875431     125566532  22333222111         13468999


Q ss_pred             EEE---CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAI---RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v---~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |.|   +|+++++++|+++|+++...     +++++.++|+|||||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   79999999999999987644     2356899999999999999974

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.78  E-value=6e-18  Score=115.73  Aligned_cols=109  Identities=20%  Similarity=0.275  Sum_probs=86.9

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCc
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      .|++++++|+.|.|+|++++++||+++|||++.....      ..++++.++    ..+.+....           ..+.
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~   65 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRI   65 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCe
Confidence            4678899999999999999999999999999876532      346677655    455555321           1346


Q ss_pred             cEEEEEE---CCHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v---~d~~~~~~~l~~~g~~~~~~------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|   +|++++.++|+++|+++..+      +.+++.++|.||+|+.|||.+..
T Consensus        66 ~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           66 DVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            7999999   68999999999999987543      34678999999999999998754

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.78  E-value=7.1e-18  Score=115.36  Aligned_cols=108  Identities=16%  Similarity=0.241  Sum_probs=84.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccE
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      ...+++++|+.|.|+|++++++||+++|||++......     ..+|+..++.  .+.+...+            .+..|
T Consensus       136 ~~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~~~~~l~l~~~~------------~g~~h  198 (310)
T 3b59_A          136 EGVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNSAHHRIAILPGP------------PCLNH  198 (310)
T ss_dssp             CCCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSSBSCSEEEEESS------------SEEEE
T ss_pred             CCcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCCCcceEEEECCC------------CceEE
Confidence            35678999999999999999999999999998865321     3466776432  34443311            34789


Q ss_pred             EEEEECCHHHH---HHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRDVSKL---KMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d~~~~---~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+|++++   .++|+++|+++...     .+..+++|++||+||.||+.+.
T Consensus       199 i~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          199 VAYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998777   99999999987643     2356789999999999999874

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.77  E-value=2e-17  Score=114.11  Aligned_cols=111  Identities=18%  Similarity=0.305  Sum_probs=83.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      ..+.|+.|.|+|++++++||+++|||++.......    ..+++..++.  .+.+......      .....+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~----~~~~l~~g~~~~~l~l~~~~~~------~~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK----QRALLGYADNQCKLELQGVKGG------VDHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT----TEEEEESSTTSCEEEEEECSSC------CCCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC----cEEEEEeCCceEEEEECCCCCC------CCCCCCCceEEEE
Confidence            35889999999999999999999999998765432    2466777654  4444333211      1123456799999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCeEEEEee
Q 032542           94 IR--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~~--------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+  |++++.++|+++|+++..+        ..+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            96  8999999999999986432        2366899999999999999974

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.76  E-value=6.4e-18  Score=115.19  Aligned_cols=112  Identities=15%  Similarity=0.127  Sum_probs=79.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CC-CeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCcc
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+++++|+.|.|+|++++++|| ++|||++.......  .. ....+|+..++.  .+.+...          ....+..
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG----------PMDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS----------CCSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC----------CCCCCce
Confidence            4568999999999999999999 99999986432110  10 123456665432  2333211          0124578


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d---~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|.|+|   +++++++|+++|+++..+     .++.+++||+|||||.||+++.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   566788999999988643     2235678999999999999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.76  E-value=3.3e-17  Score=110.78  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=82.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeE-EEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      .++|+.|.|+|++++++||+++|||++......... .....+..++.. ..+.......     +.......+++|.|+
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIAVD  105 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEECS
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEEeC
Confidence            699999999999999999999999998765432110 012345555543 3343332211     111233468999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |++++.++|+++|+++..+    .+.++.++|+||+||.|+|++..
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            9999999999999988643    34678999999999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.75  E-value=6.2e-18  Score=117.68  Aligned_cols=127  Identities=14%  Similarity=0.204  Sum_probs=91.6

Q ss_pred             cCCceeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccC--CCCCCCeeEEEEEeC--CeEEEEeecCCCCCCCC---C
Q 032542           10 CLDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEAR--PHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG---R   80 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~--~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~---~   80 (138)
                      +..+.+++++|++|.|+  |++++++||+++|||+.....  .........+++..+  ...+.+...........   .
T Consensus       151 ~~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~  230 (357)
T 2r5v_A          151 KGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEF  230 (357)
T ss_dssp             CTTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHH
T ss_pred             CCCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHH
Confidence            34567889999999999  999999999999999987542  112222355677764  35777776542211100   0


Q ss_pred             --CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecC------CCc---------------eEEEEECCCCCeEEEEee
Q 032542           81 --PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR---------------PAIFTRDPDANALEFTQV  136 (138)
Q Consensus        81 --~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~------~~~---------------~~~~~~DPdG~~~e~~~~  136 (138)
                        ...+.+++|++|.|+|+++++++|+++|+++...+      .+.               ..+|.+||||+++||++.
T Consensus       231 ~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          231 LKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence              00235789999999999999999999999875442      111               379999999999999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.75  E-value=1.1e-17  Score=113.83  Aligned_cols=111  Identities=14%  Similarity=0.140  Sum_probs=77.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CC-CeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      .++++|+.|.|+|++++++|| ++|||++.......  .. ....+|+..++.  .+.+..  .+        ..++..|
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~h  215 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--MP--------AAKRLNH  215 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--CC--------CSSSEEE
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--CC--------CCCceeE
Confidence            458999999999999999999 99999976432110  10 123455555432  222221  10        1245789


Q ss_pred             EEEEECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           90 TCIAIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        90 i~~~v~d~~~---~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|.|+|+++   ++++|+++|+++..+     .++.+++|++|||||.|||++.
T Consensus       216 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            9999998765   567999999988643     2345789999999999999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.75  E-value=2.1e-17  Score=112.20  Aligned_cols=112  Identities=13%  Similarity=0.247  Sum_probs=81.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC---CCCCeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCcc
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~---~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      .+++++|+.|.|+|++++++||+++|||++......   ........|+..++  ..+.+...  +        ...+..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~--------~~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P--------LPKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C--------CSSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C--------CCCCce
Confidence            457899999999999999999999999998753211   00012345666543  24555431  1        124578


Q ss_pred             EEEEEECCHHHHH---HHHHHCCCeEEec----CC-CceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSKLK---MILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~~~---~~l~~~g~~~~~~----~~-~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|.|+|++++.   ++ +++|+++..+    +. ..+++||+|||||.|||++.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999988876   88 9999988643    22 34568999999999999875

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.74  E-value=1.5e-17  Score=112.66  Aligned_cols=113  Identities=17%  Similarity=0.221  Sum_probs=80.5

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CC-CeeEEEEEeCC--eEEEEeecCCCCCCCCCCCCCCCc
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KL-PYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      +.+++++|+.|.|+|++++++||+++|||++.......  .. ....+|+..++  ..+.+...+          ...+.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP----------IPKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS----------CSSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCC----------CCCce
Confidence            56778999999999999999999999999987532210  00 12345666543  234443211          02457


Q ss_pred             cEEEEEECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCC-eEEEEee
Q 032542           88 RHTCIAIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDAN-ALEFTQV  136 (138)
Q Consensus        88 ~hi~~~v~d~~~---~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~-~~e~~~~  136 (138)
                      .|++|.|+|+++   ++++|+ +|+++..+     .+..+++||+||||| .|||.+.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            899999998765   567999 99987643     223567899999999 9999874

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.73  E-value=4.5e-16  Score=97.65  Aligned_cols=116  Identities=12%  Similarity=0.076  Sum_probs=77.2

Q ss_pred             eeeEEEEeCC--HHHHHHHHHHhhCCeeeccC-------CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCC--CC
Q 032542           18 VHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG--GR   86 (138)
Q Consensus        18 l~hi~l~v~d--~~~a~~fy~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~   86 (138)
                      -.+..|.|+|  +++|++||+++||+++....       .........+.+..++..+.+.......   ..+...  ..
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~---~~~~~~~~~~  101 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLP---GFSTAKSEGS  101 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGST---TCCCCCTTSC
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCccc---CCccccCCCC
Confidence            4567799999  99999999999999987543       1111112334466677766655321110   011111  12


Q ss_pred             ccEEEEEECCHHHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCeEEEEeec
Q 032542           87 DRHTCIAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~~g~~~~~~~-----~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..|++|.|+|+++++++|+++|++ ..+.     ..++.++++||+||.|+|.+..
T Consensus       102 g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          102 GVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             CCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             cEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            248999999999999999999998 6441     1278999999999999998753

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.71  E-value=2e-15  Score=102.23  Aligned_cols=109  Identities=13%  Similarity=0.054  Sum_probs=78.2

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ...++.+.|+|+++|++||+++||+++.......   .....+..++    ..+.+...+.        ..+....+++|
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~  251 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHL  251 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCC--------cCCCCceEEEE
Confidence            3457788999999999999999999987433211   1223455554    3333321111        11123468999


Q ss_pred             EEC-CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIR-DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~-d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .|+ |+++++++++++|+++..+    ++|.+.++++|||||.|+|.++
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            999 9999999999999988543    4467899999999999999885

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.70  E-value=4.8e-15  Score=91.39  Aligned_cols=111  Identities=14%  Similarity=0.017  Sum_probs=76.2

Q ss_pred             EEEEeC-CHHHHHHHHHHhhCCeeeccC--CCC--------C--CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCc
Q 032542           21 VGILCE-NLERSLEFYQNILGLEINEAR--PHD--------K--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        21 i~l~v~-d~~~a~~fy~~~lg~~~~~~~--~~~--------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      ..|.++ |+++|++||+++||+++....  ...        .  .....+.+..++..+.+.... +..  ..+. ..+ 
T Consensus         7 p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~--~~~~-~~g-   81 (149)
T 1u6l_A            7 PYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY--PYEG-IKG-   81 (149)
T ss_dssp             EEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS--CCCC-CCS-
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc--CCCC-CCc-
Confidence            668888 999999999999999987531  100        0  112334466677766554321 110  1111 122 


Q ss_pred             cEEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .+++|.|+|   +++++++|+ .|.++..+    ++|.+.++++||+|+.|+|.+..
T Consensus        82 ~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence            589999998   789999985 78877543    66778999999999999998754

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.69  E-value=5.1e-16  Score=108.37  Aligned_cols=114  Identities=18%  Similarity=0.250  Sum_probs=82.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      ....+.+|+|+.|.|+|++++.+||++ |||.+.............+|+..+..  .+.+...           ..++++
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~-----------~~~~lh  213 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-----------NGPRLH  213 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES-----------SBSEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecC-----------CCCcee
Confidence            345678999999999999999999976 99988766544444345567776543  3333321           124689


Q ss_pred             EEEEEECCHHHH---HHHHHHCCCe--EEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSKL---KMILDKAGIS--YTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~~---~~~l~~~g~~--~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|+|+|++++   .++|+++|+.  +.+.     .+...++||+||+|+++|+...
T Consensus       214 Hvaf~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          214 HVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             EEEEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcC
Confidence            999999987765   6788889985  3332     2345779999999999999764

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.69  E-value=9.2e-16  Score=107.65  Aligned_cols=125  Identities=12%  Similarity=0.095  Sum_probs=92.3

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC--CCCCCeeEEEEEeCCeEEEEeecCCCCCC----CC--CCCC
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPL----SG--RPEH   83 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~--~~~~   83 (138)
                      .|.+++++||.|.|+|++++++||.+.|||++.....  ..........++.++..+.+.....+...    ..  ...+
T Consensus        17 ~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~   96 (381)
T 1t47_A           17 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   96 (381)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhc
Confidence            4778999999999999999999999999999887532  11222244556667778888764222211    00  0112


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEecC-----C--CceEEEEECCCCCeEEEEee
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S--GRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~-----~--~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +.++.|++|+|+|+++++++|+++|+++..++     .  ..+...++||+|+.++|++.
T Consensus        97 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           97 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            46788999999999999999999999986431     1  22567899999999999985

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.68  E-value=1e-15  Score=108.67  Aligned_cols=126  Identities=13%  Similarity=0.131  Sum_probs=91.1

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC--CCCCeeEEEEEeCCeEEEEeecCCCCC------------C
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDP------------L   77 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~------------~   77 (138)
                      .|.+++++||.|.|+|+++|++||++.|||++......  .........++.++..+.|.....+..            .
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccccc
Confidence            57789999999999999999999999999998765321  122234455677888888876532210            0


Q ss_pred             CCC---------CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           78 SGR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        78 ~~~---------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +..         ..++.++.|++|+|+|+++++++++++|+++..+    .+..+...+++|+|+.++|+++.
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence            000         0134678999999999999999999999988643    23345566777888888777653

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.67  E-value=2.6e-16  Score=109.48  Aligned_cols=123  Identities=15%  Similarity=0.094  Sum_probs=88.9

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCccEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT   90 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~hi   90 (138)
                      |.+++++||.+.|+|++++++||.+.|||++........ + ....+..|+..+.+.....+.....  ...++.++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~-g-~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSAD-H-RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETT-E-EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCC-c-eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            567899999999999999999999999999876543111 1 3344556777777765322211000  01134578899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEecC----C-CceEEEEECCCCCeEEEEeec
Q 032542           91 CIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        91 ~~~v~d~~~~~~~l~~~g~~~~~~~----~-~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +|+|+|++++.++++++|+++...+    . ..+...++||+|..++|++..
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999999999886431    2 235788999999999998753

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.67  E-value=1.5e-14  Score=87.81  Aligned_cols=114  Identities=11%  Similarity=0.101  Sum_probs=78.3

Q ss_pred             eeeeEEEEeC--CHHHHHHHHHHhh-CCeeecc--CCC----CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCc
Q 032542           17 SVHHVGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        17 ~l~hi~l~v~--d~~~a~~fy~~~l-g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      ++. ..|.++  |+++|++||+++| |+++...  ...    .......+.+..++..+.+.......   ..+  ....
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~---~~~--~~~~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRH---AFD--FTPA   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCC---SCC--CCTT
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCC---CCC--CCCc
Confidence            344 557776  9999999999999 9998742  211    11122344466677665544322111   111  1223


Q ss_pred             cEEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ..++|.|+|   +++++++|+ .|.++..+    ++|.+..+++||+|+.|+|.++.
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~~  135 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLAG  135 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEECC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEecC
Confidence            479999999   999999999 89887644    56778999999999999998753

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.63  E-value=2.3e-14  Score=87.34  Aligned_cols=113  Identities=9%  Similarity=0.112  Sum_probs=77.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhh-CCeeecc--CCC----CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCC
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR   86 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~l-g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   86 (138)
                      +++++....+.+.|.++|++||+++| |+++...  ...    .......+.+.+++..+.+.... +.    .+   ..
T Consensus         2 ~~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~----~~---~~   73 (139)
T 1tsj_A            2 DIPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SG----TE---LP   73 (139)
T ss_dssp             CCCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CC----CC---ce
Confidence            34556666556679999999999999 9998742  111    11223445577777655444321 11    11   11


Q ss_pred             ccEEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           87 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        87 ~~hi~~~v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                       ..+++.|+|   +++++++|. .|.++..+    .+|.+..+++||+|+.|+|...
T Consensus        74 -~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 -ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             -CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             -EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence             568999987   788899998 68887644    7789999999999999999864

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.61  E-value=9.3e-15  Score=102.55  Aligned_cols=126  Identities=13%  Similarity=0.119  Sum_probs=88.5

Q ss_pred             CCceeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCC-----CCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCC-
Q 032542           11 LDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGR-   80 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~-   80 (138)
                      ....+.+++|+++.|+  |++++.+||+++|||+......     .........++..+  ...+.+............ 
T Consensus       178 ~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~  257 (381)
T 1t47_A          178 AHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQID  257 (381)
T ss_dssp             SSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHH
T ss_pred             CCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHH
Confidence            4467889999999999  9999999999999999876532     22233455556543  346777655421111100 


Q ss_pred             ----CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecCCC---------------------ceEEEEECCCCCeEEEEe
Q 032542           81 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        81 ----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~---------------------~~~~~~~DPdG~~~e~~~  135 (138)
                          ...+.+++|+||.|+|+++++++|+++|+++...+..                     ....+-+||+|.++++++
T Consensus       258 ~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift  337 (381)
T 1t47_A          258 EYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFT  337 (381)
T ss_dssp             HHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEB
T ss_pred             HHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEec
Confidence                0134678999999999999999999999998654211                     113666899998888876


Q ss_pred             e
Q 032542          136 V  136 (138)
Q Consensus       136 ~  136 (138)
                      .
T Consensus       338 ~  338 (381)
T 1t47_A          338 K  338 (381)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.60  E-value=1.4e-14  Score=101.67  Aligned_cols=128  Identities=13%  Similarity=0.084  Sum_probs=94.8

Q ss_pred             ccCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CCCeeEEEEEeCCeEEEEeecCCCCC-CCC--CCCC
Q 032542            9 ICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEH   83 (138)
Q Consensus         9 ~~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~--~~~~   83 (138)
                      +++...+++++||.|.|+|++++++||.+.|||+........  ........++.|+..+.|.....+.. +..  ...+
T Consensus         3 ~~~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~h   82 (393)
T 3isq_A            3 KPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKH   82 (393)
T ss_dssp             CCSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHH
T ss_pred             CCCCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhc
Confidence            456778999999999999999999999999999988743321  22223456777888888876433321 100  0124


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCeEEEEee
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +.++.|++|+|+|+++++++++++|+++..++       +..+...+++|.|...-|++.
T Consensus        83 G~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           83 GDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             CSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            56789999999999999999999999886431       123567889999998888874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.59  E-value=4.9e-14  Score=99.90  Aligned_cols=126  Identities=13%  Similarity=0.120  Sum_probs=88.4

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CCCeeEEEEEeCCeEEEEeecCCCCC------CCC---
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP------LSG---   79 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~---   79 (138)
                      ..+.+++++||.|.|+|++++++||.+.|||++.......  ......+.++.|+..+.|.....+..      .+.   
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            3577899999999999999999999999999887653211  11234555677888888876533211      000   


Q ss_pred             ------CCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCeEEEEee
Q 032542           80 ------RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        80 ------~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~----~~~~~~~~~DPdG~~~e~~~~  136 (138)
                            ...++.++.|++|+|+|+++++++++++|+++...+    +..+...+++|+|..+.|+++
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY  171 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEEC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEcc
Confidence                  002346789999999999999999999999876431    223344556666666666654

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.58  E-value=4.7e-13  Score=83.99  Aligned_cols=111  Identities=13%  Similarity=-0.010  Sum_probs=78.2

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCC-----C---------CCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCC
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPH-----D---------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG   85 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   85 (138)
                      .-.|.++|.++|.+||+++||.++......     .         ......+.+++++..+.+......     .+. .+
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-----~~~-~~  101 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-----ADK-IN  101 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-----CCC-CC
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-----CCC-CC
Confidence            345667799999999999999997643211     0         122356778888887776653211     111 12


Q ss_pred             CccEEEEEE--------CCHHHHHHHHHHCC-CeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v--------~d~~~~~~~l~~~g-~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ....+++.+        +|+++++++|.+.| +++..+    .+|.+..+++||+|+.|+|...
T Consensus       102 ~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          102 NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            234567776        57899999999999 677543    6788999999999999999764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.56  E-value=3.3e-15  Score=104.03  Aligned_cols=127  Identities=13%  Similarity=0.095  Sum_probs=86.6

Q ss_pred             cCCceeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCC--CCCCCeeEEEE--EeCCeEEEEeec-CCCCCCCCC--
Q 032542           10 CLDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWL--WVGAEMIHLMEL-PNPDPLSGR--   80 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~--~~~~~~~~~~~--~~~~~~~~l~~~-~~~~~~~~~--   80 (138)
                      +....+.+|+|+++.|+  |++++.+||+++|||+......  ....+.....+  ..+...+++... .........  
T Consensus       151 ~~~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          151 PVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             CCTTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHH
T ss_pred             CCCCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhH
Confidence            34467899999999999  9999999999999999876432  11111212222  334567888765 222111000  


Q ss_pred             -CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEe-cC-------------CCc--------eEEEEEC----CCCCeEEE
Q 032542           81 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEF  133 (138)
Q Consensus        81 -~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~-~~-------------~~~--------~~~~~~D----PdG~~~e~  133 (138)
                       ...+.+++|+||.|+|++++.++|+++|+++.. .+             .+.        ...+-.|    |+|++++|
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqi  310 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQI  310 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEE
Confidence             013467899999999999999999999998865 22             011        1366688    88999988


Q ss_pred             Eee
Q 032542          134 TQV  136 (138)
Q Consensus       134 ~~~  136 (138)
                      ++.
T Consensus       311 ft~  313 (357)
T 1cjx_A          311 FSE  313 (357)
T ss_dssp             EBC
T ss_pred             ecc
Confidence            864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.54  E-value=7.6e-15  Score=102.19  Aligned_cols=120  Identities=12%  Similarity=0.046  Sum_probs=85.7

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      .|.+++++||.+.|+|++++++|| +.|||++.......    ....++.++..+.+...+..........++.++.|++
T Consensus         7 ~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~ia   81 (357)
T 1cjx_A            7 PMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMA   81 (357)
T ss_dssp             TTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEE
Confidence            488999999999999999999999 79999988753311    2344556776666654211100000012346789999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEecCC---CceEEEEECCCCCeEEEEee
Q 032542           92 IAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~~~---~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+|+|++++.++++++|+++...+.   ......+++|+|..++|+++
T Consensus        82 f~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~  129 (357)
T 1cjx_A           82 FRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  129 (357)
T ss_dssp             EEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECC
Confidence            9999999999999999998765422   23456778888888888765

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.50  E-value=3.4e-12  Score=77.58  Aligned_cols=109  Identities=10%  Similarity=0.063  Sum_probs=76.2

Q ss_pred             EEEeC-CHHHHHHHHHHhhC-Ceeecc--C----CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           22 GILCE-NLERSLEFYQNILG-LEINEA--R----PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        22 ~l~v~-d~~~a~~fy~~~lg-~~~~~~--~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      .|.++ |.++|.+||+++|| .++...  .    +........+.+++++..+.+.........    . .+...++++.
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~----~-~~~~~~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF----T-FTPAMSLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSC----C-CCTTSCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCC----C-CCCCEEEEEE
Confidence            46667 89999999999999 565422  1    112233456778888887776643221110    1 1223579999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           94 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |+|   +++++++|. .|.++..+    +++.+..+++||+|+.|+|...
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            999   999999995 57776543    6788999999999999999753

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.49  E-value=4.2e-13  Score=95.27  Aligned_cols=104  Identities=17%  Similarity=0.196  Sum_probs=74.4

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-----CCCeeEEEEEeC--CeEEEEeecCC---CCCCCCC
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWVG--AEMIHLMELPN---PDPLSGR   80 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~l~~~~~---~~~~~~~   80 (138)
                      ....+.+++|+++.|+|++++.+||+++|||+........     ..+....++..+  ...+.+.....   .......
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            4566889999999999999999999999999988765322     123455566653  45777766532   1111000


Q ss_pred             C---CCCCCccEEEEEECCHHHHHHHHHH----CCCeEEec
Q 032542           81 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  114 (138)
Q Consensus        81 ~---~~~~~~~hi~~~v~d~~~~~~~l~~----~g~~~~~~  114 (138)
                      .   ..+.+++||||.|+|+.++.++|++    .|+++...
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence            0   1356799999999999999999999    89988653

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.46  E-value=8.4e-13  Score=93.59  Aligned_cols=104  Identities=15%  Similarity=0.165  Sum_probs=74.0

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-----CCeeEEEEEeC--CeEEEEeecCCC-CCCCC--C
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP-DPLSG--R   80 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~-~~~~~--~   80 (138)
                      ....+.+|+|+++.|+|++++.+||+++|||+.........     .+....++..+  ...+.+...... .....  .
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            44568899999999999999999999999999887543211     23455667653  346666654321 11100  0


Q ss_pred             C---CCCCCccEEEEEECCHHHHHHHHHH----CCCeEEec
Q 032542           81 P---EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  114 (138)
Q Consensus        81 ~---~~~~~~~hi~~~v~d~~~~~~~l~~----~g~~~~~~  114 (138)
                      .   ..+.+++|+||.|+|++++.++|++    .|+++.+.
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence            0   1356799999999999999999999    79988654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.43  E-value=1.5e-12  Score=91.47  Aligned_cols=104  Identities=12%  Similarity=0.041  Sum_probs=75.4

Q ss_pred             cCCceeeeeeeEEEEeCC--HHHHHHHHHHhhCCeeeccCC-----CCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCC
Q 032542           10 CLDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGR   80 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d--~~~a~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~   80 (138)
                      .+...+.+++|+++.|+|  ++++.+||+++|||+......     ....+.+...+..+  ...+.|.........+..
T Consensus       166 ~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I  245 (393)
T 3isq_A          166 LPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQI  245 (393)
T ss_dssp             SCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHH
T ss_pred             CCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHH
Confidence            345678999999999998  999999999999999876432     22233455556543  457888765431111100


Q ss_pred             -----CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           81 -----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        81 -----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                           ...+.|++|+||.|+|+.++.++|+++|+++..
T Consensus       246 ~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          246 QEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             HHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCC
Confidence                 013577999999999999999999999998754

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.39  E-value=2.7e-11  Score=79.08  Aligned_cols=108  Identities=15%  Similarity=0.081  Sum_probs=74.1

Q ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEE---EE
Q 032542           18 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT---CI   92 (138)
Q Consensus        18 l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi---~~   92 (138)
                      .....|.|+|.++..+||+++|||++.....      ..+.+..++.  .+.+-..+....     ....|.-|+   ++
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~i   79 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEEE
Confidence            5567899999999999999999999887655      3455655333  333333222211     223556667   59


Q ss_pred             EECCHHHHHHHHHHCCCeEE--ecCCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~--~~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++-.++..-|.. +.++.  -....++++|+.||+||.||+....
T Consensus        80 ~vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           80 KVENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             EESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             EcCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            99988887766654 55443  2344667899999999999998654

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.88  E-value=2.1e-07  Score=57.75  Aligned_cols=101  Identities=12%  Similarity=0.024  Sum_probs=69.9

Q ss_pred             EEeC-CHHHHHHHHHHhh-CCeeec--cCCC-----CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           23 ILCE-NLERSLEFYQNIL-GLEINE--ARPH-----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        23 l~v~-d~~~a~~fy~~~l-g~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      |..+ |.++|.+||+++| |.++..  ..+.     .......+.+.+++..+.+.... +    ..+.  .....+.+.
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p----~~~~--~~~~sl~v~   83 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-P----AFRH--SEAFSFQVA   83 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-T----TCCC--CTTEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-C----CcCC--CCceEEEEE
Confidence            5566 9999999999999 988763  2211     12335667788888876665421 1    1111  122478888


Q ss_pred             ECC---HHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           94 IRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~d---~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++|   +++++++|.+.|.++.      +...++||.|+.|.|...
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEeE
Confidence            887   6777899987788766      345899999999998753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.70  E-value=1.9e-08  Score=67.44  Aligned_cols=93  Identities=12%  Similarity=0.208  Sum_probs=67.8

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhC-----CeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCC--------CC--
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--------LS--   78 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~--   78 (138)
                      |..+|+|+.+.|++++        .||     |.+.........+...+.+.+++.+++++...+...        ..  
T Consensus        21 M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~   92 (274)
T 3p8a_A           21 MILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGV   92 (274)
T ss_dssp             CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGT
T ss_pred             ccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccc
Confidence            4578999999999884        467     887765444444555555666889999999865310        00  


Q ss_pred             CC------CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           79 GR------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        79 ~~------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                      ..      ...+.++.+++++++|+++..++|+++|+.+..+
T Consensus        93 ~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p  134 (274)
T 3p8a_A           93 AFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGP  134 (274)
T ss_dssp             CTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEE
T ss_pred             hHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCC
Confidence            01      1245789999999999999999999999987544

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.53  E-value=4.9e-07  Score=69.13  Aligned_cols=119  Identities=19%  Similarity=0.241  Sum_probs=73.2

Q ss_pred             eeeeeEEEEe---CCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC--CeEEEEeecCCCCC-----------CC-
Q 032542           16 VSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDP-----------LS-   78 (138)
Q Consensus        16 ~~l~hi~l~v---~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~-----------~~-   78 (138)
                      .+...+.+..   .-++++++||.++|++.......  .. .-..++...  ...+.+...+....           .. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (941)
T 3opy_B            8 NGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN--QK-LFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTR   84 (941)
T ss_dssp             CEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS--CC-C---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC-
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC--Cc-ceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhc
Confidence            3566666665   56899999999999997766322  11 113344322  23455432211100           00 


Q ss_pred             -CCCCCC-CCccEEEEEECCHHHHHHHHHHCCCeEEecCC--CceEEEEECCCCCeEEEEeec
Q 032542           79 -GRPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        79 -~~~~~~-~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~--~~~~~~~~DPdG~~~e~~~~~  137 (138)
                       ...... +...|+.|.+.|++++.+.|.+.+.++...+.  +...+|..||+||+|+|.+..
T Consensus        85 ~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           85 SLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ---------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             ccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence             011122 33459999999999999999999987765544  778999999999999997643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.47  E-value=0.00018  Score=47.16  Aligned_cols=90  Identities=9%  Similarity=0.089  Sum_probs=58.9

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC-
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-   95 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~-   95 (138)
                      .+ ||.|.|+|.+++  ||.+ +|+                     +..+.+.+..++.-. ..+...-++-.+-|.|+ 
T Consensus       152 ti-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~-~~~~~t~gLe~l~~~v~~  205 (244)
T 3e0r_A          152 EI-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLT-VDNTVTWDLSMLKFLVNE  205 (244)
T ss_dssp             EE-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTT-CCTTSBSSEEEEEEEESS
T ss_pred             EE-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCC-CCCCCccCceEEEEEeCH
Confidence            46 999999999988  9986 443                     112333333333221 12222345667777775 


Q ss_pred             -CHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           96 -DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        96 -d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                       |+.++.++|++.|.-+   .-....+.+.||.|+.|-|.+
T Consensus       206 ~dl~~l~~~L~~~g~~i---dkk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          206 LDIASLRQKFESTEYFI---PKSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CCHHHHHHHTTTSCEEC---CTTCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHHhCCceE---cccCCEEEEECCCCCEEEEEE
Confidence             7889999999887632   223457899999999987764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.42  E-value=0.0017  Score=43.02  Aligned_cols=34  Identities=12%  Similarity=0.182  Sum_probs=30.8

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR   47 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~   47 (138)
                      ..+++++||.|.|+|++++.+|| +.|||+.....
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~~  187 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLDQ  187 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccCC
Confidence            45789999999999999999999 99999988763

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.00  E-value=0.039  Score=36.97  Aligned_cols=34  Identities=15%  Similarity=0.223  Sum_probs=30.5

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccC
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEAR   47 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~   47 (138)
                      ...+|.+|.+.++|++++++.|+++||.+.....
T Consensus       187 Ga~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          187 KQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             TTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            4578999999999999999999999999987653

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=95.89  E-value=0.02  Score=34.73  Aligned_cols=61  Identities=15%  Similarity=0.226  Sum_probs=42.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC-CCCCeeEEEEE---eCCeEEEEeecCCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLW---VGAEMIHLMELPNPDPL   77 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~~~~~~~~   77 (138)
                      .++.|+++.|.|++++.+..++ .|.++....+. ...+...+|+.   .++..++|++.......
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~~  142 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAEN  142 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCCC
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCcccc
Confidence            4799999999999999999987 89887654221 11223455663   34678999887655433

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=95.78  E-value=0.28  Score=38.50  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=36.0

Q ss_pred             cEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           88 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ..+.|.+.|++.+.+.|.+..++..+..-....+|..||=||.+.|..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~  172 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSS  172 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeec
Confidence            468999999999999999874443333323457999999999998753

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=95.50  E-value=0.11  Score=29.08  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=38.0

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.|+.+.|.|+++..+-+++ .|.+.....+ ....++..++|..+++.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            468999999999999999987 7988765432 2456667777777887764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=95.42  E-value=0.18  Score=29.76  Aligned_cols=53  Identities=11%  Similarity=0.172  Sum_probs=41.5

Q ss_pred             CCCccEEEEEECCHHHHHHHHHH-CCCeEEecC----------CCceEEEEECCCCCeEEEEee
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~----------~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ..++.|+++.|.|++++.+.+++ .|.++....          ......++.-++|..+++.+.
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGE   80 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEEC
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEec
Confidence            35689999999999999999998 799886520          233457777788889998874

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=95.15  E-value=0.12  Score=29.42  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.6

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .+.|+++.|.|++++.+-+++ .|.+....    ..+...+++..++|..+++.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            368999999999999999975 69887543    22345667777778999998753

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=94.92  E-value=0.11  Score=29.73  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=36.8

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.|+++.|.|+++..+.+++ .|.+....    ..+.+..++.. ++..+++++.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            468999999999999999998 89987643    22334455554 5677888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=94.88  E-value=0.13  Score=29.63  Aligned_cols=51  Identities=10%  Similarity=0.069  Sum_probs=37.5

Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .++.|+++.|+|+++..+.++..|.+....     ..+.+..++.. +|..+|++++
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   61 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAP   61 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEec
Confidence            357899999999999999998889887432     22334455554 5778888875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=94.80  E-value=0.18  Score=28.76  Aligned_cols=54  Identities=20%  Similarity=0.302  Sum_probs=34.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEe
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   69 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   69 (138)
                      -.++.|+.+.|+|++++.+..++ .|.++.........+...+++.- ++..++++
T Consensus        79 ~~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           79 ACGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            34789999999999999999987 88887643222122223344433 33455554

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=94.60  E-value=0.14  Score=30.07  Aligned_cols=52  Identities=12%  Similarity=0.028  Sum_probs=40.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec---C-CCceEEEEECCCC-----CeEEEEee
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDA-----NALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~-~~~~~~~~~DPdG-----~~~e~~~~  136 (138)
                      .++.|+.+.|.|++++.+.+++ .|.+....   . .+.+..++..+++     ..+++.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            4578999999999999999985 79987643   2 2445677887775     78998875

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=94.59  E-value=0.18  Score=30.17  Aligned_cols=55  Identities=15%  Similarity=0.088  Sum_probs=38.4

Q ss_pred             CCCCCccEEEEEECCHHHHHHHHHH-CCCeEEec---C---------------CCceEEEEECCCCCeEEEEeec
Q 032542           82 EHGGRDRHTCIAIRDVSKLKMILDK-AGISYTLS---K---------------SGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        82 ~~~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~---------------~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ....++.|+++.|.|+++..+.+++ .|.+....   .               .+.+..++.. .+..+|+++..
T Consensus        15 ~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~~   88 (159)
T 3gm5_A           15 LDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEPD   88 (159)
T ss_dssp             CCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEEC
Confidence            3446689999999999999999987 89875421   1               2334444544 46788888753

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=94.51  E-value=0.26  Score=29.00  Aligned_cols=53  Identities=13%  Similarity=0.093  Sum_probs=37.6

Q ss_pred             CCCccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEE-CCCCCeEEEEee
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQV  136 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~-DPdG~~~e~~~~  136 (138)
                      ..++.|+.+.|.|+++..+-+++ .|.+...........++. +..+..+++.+.
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            35689999999999999999977 799887653323333333 334677777763

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=94.06  E-value=0.29  Score=28.75  Aligned_cols=55  Identities=16%  Similarity=0.163  Sum_probs=36.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   71 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   71 (138)
                      .++.|+.+.|.|++++.+-.++ .|.++.........+...++++- ++..+++++.
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  149 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  149 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeecCCCcccCCceEEEEEECCCCCEEEEEec
Confidence            4688999999999999999987 79887654321112233444433 3456777654

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=93.93  E-value=0.17  Score=29.51  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=35.7

Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++.|+.+.|.|++++.+-+++.|.++...........+.-++|..+.+.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            46799999999999999998888877543222224445545677777765

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=93.21  E-value=0.42  Score=29.39  Aligned_cols=55  Identities=15%  Similarity=0.253  Sum_probs=38.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      .++.|+.+.|.|++++.+-.++ .|.++.......... ..++++- ++..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKMK-GLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSST-TCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCCccCCcc-eEEEEECCCCCEEEEEEcc
Confidence            4788999999999999999987 799887643322211 2334443 45688887643

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=93.06  E-value=0.4  Score=26.98  Aligned_cols=29  Identities=21%  Similarity=0.518  Sum_probs=24.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINE   45 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~   45 (138)
                      .++.|+.+.|+|++++.+..++ .|.++..
T Consensus        72 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~  100 (126)
T 2p25_A           72 LGLRHLAFKVEHIEEVIAFLNE-QGIETEP  100 (126)
T ss_dssp             SSCCCEEEECSCHHHHHHHHHH-TTCCCCC
T ss_pred             ccceEEEEEeCCHHHHHHHHHH-cCCcccc
Confidence            3678999999999999999887 7887654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=93.05  E-value=0.22  Score=28.84  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=33.6

Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .+.|+.+.|.|+++..+-.++.|.++... .+.+...++...+|..+++..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            46899999999999999888888877654 222234555434566666643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=92.52  E-value=0.83  Score=26.05  Aligned_cols=50  Identities=16%  Similarity=0.122  Sum_probs=36.6

Q ss_pred             ccEEEEEECCHHHHHHHHHH-CCCeEEec---CCC-ceEEEEECCC---CCeEEEEee
Q 032542           87 DRHTCIAIRDVSKLKMILDK-AGISYTLS---KSG-RPAIFTRDPD---ANALEFTQV  136 (138)
Q Consensus        87 ~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~~~-~~~~~~~DPd---G~~~e~~~~  136 (138)
                      +.|+.+.|.|+++..+.+++ .|.++...   +.+ .+.+++..++   +..+++.+.
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            67999999999999999987 89987643   222 2345565554   678888753

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=92.18  E-value=0.4  Score=28.63  Aligned_cols=54  Identities=15%  Similarity=0.210  Sum_probs=35.6

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEE-eCCeEEEEeecC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELP   72 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~   72 (138)
                      ++.|+.+.|.|++++.+-.++ .|.++.........+ +.++++ .++..++|++..
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g-~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV-VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC-EEEEEECSSSCEEEEEEC-
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe-EEEEEECCCCCEEEEEEEC
Confidence            467899999999999999987 788875432222222 334443 245678888764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=92.17  E-value=0.83  Score=28.00  Aligned_cols=54  Identities=15%  Similarity=0.254  Sum_probs=36.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   71 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   71 (138)
                      .++.|+.+.|.|++++.+.+++ .|.++......... ...++++- ++..+++++.
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~p~~~~~-~~~~~~~DPdG~~iel~~~  177 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPDDGKM-KGLAFIQDPDGYWIEILNP  177 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEECTTSSSS-TTCEEEECTTCCEEEEECT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecCCcCCCc-eeEEEEECCCCCEEEEEec
Confidence            4688999999999999999987 79887653322111 12344443 4567777754

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=92.02  E-value=0.7  Score=31.88  Aligned_cols=46  Identities=15%  Similarity=-0.015  Sum_probs=35.5

Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEec----CC----------CceEEEEECCCCC
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KS----------GRPAIFTRDPDAN  129 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~----------~~~~~~~~DPdG~  129 (138)
                      +..++|+...|.||+++.+.|+++|+++...    +.          ....+.|.|.+|.
T Consensus       233 G~~iNHlT~rv~DId~v~~~m~~~G~~~k~~IeGsP~~lLrQTSf~A~~e~v~F~d~~G~  292 (340)
T 3iuz_A          233 GNAFNHATDRVDDVFGLSEQQXALGRPMXDXVEVSGSGRVXQTAFRADTVRRQFIGAQGE  292 (340)
T ss_dssp             TTSCSEEEEECSCHHHHHHHHHHTTCCBCSCCEECTTSSEEEEEBCCCEEEEEEECTTSC
T ss_pred             CCccccccCCcCCHHHHHHHHHHcCCChhhhhcCCcccceeeeeccccceEEEEecCCCc
Confidence            5678999999999999999999999987432    21          2245777887774

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=91.89  E-value=1  Score=25.57  Aligned_cols=54  Identities=7%  Similarity=0.201  Sum_probs=34.7

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEe
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM   69 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~   69 (138)
                      ..+..|+.+.|.|++++.+-..+ .|.++.........+....++.- ++..++++
T Consensus        77 ~~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~  131 (133)
T 4hc5_A           77 PGGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLV  131 (133)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEE
T ss_pred             CCCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEE
Confidence            35678999999999999999987 79888753222222223333333 34455554

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=91.76  E-value=0.83  Score=26.89  Aligned_cols=30  Identities=20%  Similarity=0.267  Sum_probs=26.4

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+.+.|.|+++..+-+++ .|.++...
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~   52 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTF   52 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEc
Confidence            4578999999999999999998 89988765

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=91.71  E-value=0.64  Score=26.84  Aligned_cols=50  Identities=8%  Similarity=-0.039  Sum_probs=35.0

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCC-C--ceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G--RPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~-~--~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.|+.+.|.|++++.+.+++ .|.++..... .  .....+.. +|..++|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            367999999999999999876 7998764311 1  12222233 6788888775

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=91.28  E-value=1.3  Score=25.76  Aligned_cols=52  Identities=19%  Similarity=0.192  Sum_probs=38.0

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec---CC-CceEEEEECCC---CCeEEEEee
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD---ANALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~---~~-~~~~~~~~DPd---G~~~e~~~~  136 (138)
                      .++.|+.+.|.|+++..+.+++ .|.++...   +. +.+..++..++   +..+++.+.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            4578999999999999999986 79987643   11 22345666554   578888765

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=91.26  E-value=1.3  Score=25.46  Aligned_cols=49  Identities=2%  Similarity=-0.114  Sum_probs=34.5

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .++.|+.+.|.|+++..+-+++ .|.+.....+  ....+...+|..+.+.+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            4678999999999999988886 6877654322  23345555566776654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=91.13  E-value=1  Score=25.56  Aligned_cols=30  Identities=13%  Similarity=0.224  Sum_probs=26.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+.+.|.|++++.+-+++ .|.+....
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~   39 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSF   39 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEe
Confidence            4678999999999999999988 79988754

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=90.74  E-value=1.6  Score=25.71  Aligned_cols=47  Identities=13%  Similarity=0.077  Sum_probs=34.7

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .+.|+.+.|.|++++.+-+++ .|.++....  ....++.. +|..+++.+
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~--~~~~~~~~-~~~~l~l~~   52 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN--PEIIFYQM-NGFVLATWL   52 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC--SSEEEEEC-SSSEEEEEE
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC--CCEEEEEc-CCEEEEEEe
Confidence            468999999999999999987 788765433  23444544 577777765

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=90.10  E-value=1  Score=26.47  Aligned_cols=48  Identities=8%  Similarity=-0.001  Sum_probs=34.3

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .+.|+.+.|.|++++.+.+++ .|.++....++  ..++.-++|..++|.+
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~   73 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWS   73 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEe
Confidence            578999999999999998887 68876543221  3445555567777765

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=90.01  E-value=1.3  Score=26.23  Aligned_cols=48  Identities=6%  Similarity=-0.077  Sum_probs=34.6

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++.|+.+.|.|+++..+-+++ .|.++....+  ...++.-++|..+.+..
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~   54 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWA   54 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEec
Confidence            478999999999999998887 7887654432  24455555677777754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=89.41  E-value=1.6  Score=25.62  Aligned_cols=30  Identities=13%  Similarity=0.283  Sum_probs=25.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                      ..+.||.+.|.|+++..+-.++.|......
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~lg~~~~~~   37 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGTLGFEFNPK   37 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHHTTCEECGG
T ss_pred             ccEEEEEEEeCCHHHHHHHHHHhCCCccee
Confidence            457899999999999999998888766543

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=88.97  E-value=1.7  Score=25.48  Aligned_cols=30  Identities=17%  Similarity=0.313  Sum_probs=26.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+.+.|.|+++..+-+++ .|.++...
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~   56 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTF   56 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEec
Confidence            4678999999999999999988 79988754

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=88.63  E-value=2.4  Score=24.84  Aligned_cols=49  Identities=18%  Similarity=0.124  Sum_probs=34.6

Q ss_pred             CCccEEEEEECCHHHHHHHH---H-HCCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           85 GRDRHTCIAIRDVSKLKMIL---D-KAGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l---~-~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .++.|+.+.|.|+++..+-+   + ..|.+.......+. .++.  +|..++|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            56789999999999998888   4 58998865422222 3444  5667777654

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=88.61  E-value=3.2  Score=26.19  Aligned_cols=95  Identities=17%  Similarity=0.170  Sum_probs=56.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeee-ccCCCCCCCeeEEE----EEeCCeEEEEeecCCCCCCCCCCCCCCCccEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEIN-EARPHDKLPYRGAW----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT   90 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi   90 (138)
                      -.++||+++|++.+.|.+|-+.++..-.. ....-++......-    +..++-.+..+..+-+..  +.+++ .|+-|+
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~cvELP~P~~--K~Yp~-eGWEHI  118 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGE--KRYPH-EGWEHI  118 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCS--SCCSS-CEEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEEEEEEcCCCCC--CCCCC-CCceEE
Confidence            36899999999999999999998875422 22111111111111    334566777777665542  22333 668999


Q ss_pred             EEEEC----CHHHHHHH------HHHCCCeEEe
Q 032542           91 CIAIR----DVSKLKMI------LDKAGISYTL  113 (138)
Q Consensus        91 ~~~v~----d~~~~~~~------l~~~g~~~~~  113 (138)
                      -+.++    ++++...+      +...|+++..
T Consensus       119 E~Vlp~~~~t~~~~~~~l~~~~~~~~~gikvK~  151 (192)
T 1k4n_A          119 EIVLPGDPETLNARALALLSDEGLSLPGISVKT  151 (192)
T ss_dssp             EEECCSCGGGHHHHHHHTSCHHHHHSTTCEEEE
T ss_pred             EEEecCCcCCHHHHHHHHhhcccccCCCcEEEe
Confidence            99987    34444333      3335777754

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=88.39  E-value=1.4  Score=26.01  Aligned_cols=56  Identities=16%  Similarity=0.179  Sum_probs=37.1

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   74 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   74 (138)
                      +..|+.+.|.|++++.+-.++ .|.++.........+ +..++.- ++..+++++....
T Consensus        65 ~~~hl~f~V~d~d~~~~~l~~-~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~~~  121 (144)
T 3r6a_A           65 RNTQATFLVDSLDKFKTFLEE-NGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHSKI  121 (144)
T ss_dssp             GGCCEEEEESCHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEECC-
T ss_pred             cceEEEEEeCCHHHHHHHHHH-cCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcCCc
Confidence            458999999999999999987 898876542211222 3334433 4668888876543

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=88.15  E-value=2.3  Score=23.96  Aligned_cols=53  Identities=11%  Similarity=0.079  Sum_probs=35.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   71 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   71 (138)
                      .+..|+.+.|.|++++.+..++ .|.++.....  ..+....+++- ++..+++++.
T Consensus        71 ~~~~~~~f~v~d~~~~~~~l~~-~G~~~~~~~~--~~g~~~~~~~DPdG~~iel~~~  124 (126)
T 2qqz_A           71 AKRAHPAFYVLKIDEFKQELIK-QGIEVIDDHA--RPDVIRFYVSDPFGNRIEFMEN  124 (126)
T ss_dssp             CSSSCEEEEETTHHHHHHHHHH-TTCCCEEECS--STTEEEEEEECTTSCEEEEEEE
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-cCCCccCCCC--CCCeeEEEEECCCCCEEEEEeC
Confidence            4688999999999999999987 7887765432  12223344433 3456776653

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=87.96  E-value=1.9  Score=23.91  Aligned_cols=53  Identities=15%  Similarity=0.196  Sum_probs=32.7

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEee
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   70 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   70 (138)
                      ...|+.+.|.|++++.+...+ .|.++.........+....+++- ++..+++++
T Consensus        64 ~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  117 (119)
T 2pjs_A           64 DVPDLSIEVDNFDEVHARILK-AGLPIEYGPVTEAWGVQRLFLRDPFGKLINILS  117 (119)
T ss_dssp             CCCSEEEEESCHHHHHHHHHH-TTCCCSEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred             ceeEEEEEECCHHHHHHHHHH-CCCccccCCccCCCccEEEEEECCCCCEEEEEe
Confidence            467999999999999999987 78776543211112223334432 344566553

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=87.40  E-value=2.4  Score=24.44  Aligned_cols=30  Identities=23%  Similarity=0.422  Sum_probs=24.9

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhhCCeeecc
Q 032542           16 VSVHHVGILCE--NLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        16 ~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~   46 (138)
                      .++.|+.+.|.  |++++.+...+ .|.++...
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~   96 (139)
T 1r9c_A           65 RSYNHIAFKIDDADFDRYAERVGK-LGLDMRPP   96 (139)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCBCCC
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCC
Confidence            46889999999  99999999887 78876653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=85.42  E-value=3.7  Score=23.66  Aligned_cols=47  Identities=11%  Similarity=0.101  Sum_probs=32.5

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      ++.|+.+.|.|+++..+-+++ .|.++......  ..++.. +|..+++.+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~-~~~~l~l~~   51 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT--GAYLTC-GDLWVCLSY   51 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT--EEEEEE-TTEEEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecCC--cEEEEE-CCEEEEEEE
Confidence            468999999999999999987 79987654222  233433 344566654

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=85.36  E-value=3.1  Score=24.76  Aligned_cols=57  Identities=9%  Similarity=0.131  Sum_probs=36.1

Q ss_pred             eeeeeeeEEEEe---CCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           14 GVVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        14 ~~~~l~hi~l~v---~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      .-.++.|+.+.|   .|++++.+-.++ .|.++........ +...+++.- ++..+++++.+
T Consensus        73 ~~~g~~hi~f~V~~~~dld~~~~~l~~-~G~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           73 GAVGQGHFCFYADDKAEVDEWKTRFEA-LEIPVEHYHRWPN-GSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEECEEEEEESSHHHHHHHHHHHHT-TTCCCCEEEECTT-SCEEEEEECTTCCEEEEEEGG
T ss_pred             CCcceeEEEEEeCCHHHHHHHHHHHHH-CCCEEeccccccC-CcEEEEEECCCCCEEEEEeCC
Confidence            345789999999   777877777776 6877653322111 223444443 45688888754

>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1

Probab=85.12  E-value=2.6  Score=24.39  Aligned_cols=30  Identities=17%  Similarity=0.086  Sum_probs=23.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARP   48 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~   48 (138)
                      ++..+.+.+.+ ..+.+||++ +||+......
T Consensus       108 g~~~i~l~~~n-~~a~~~y~k-~GF~~~~~~~  137 (152)
T 2g3a_A          108 GCMGAYIDTMN-PDALRTYER-YGFTKIGSLG  137 (152)
T ss_dssp             TCCEEEEEESC-HHHHHHHHH-HTCEEEEEEC
T ss_pred             CCCEEEEEecC-ccHHHHHHH-CCCEEeeecc
Confidence            46677778875 679999997 9999887644

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=85.06  E-value=3.8  Score=23.41  Aligned_cols=29  Identities=14%  Similarity=0.171  Sum_probs=25.0

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      ++.|+.+.|.|+++..+-+++ .|.++...
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~   33 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEAR   33 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEc
Confidence            367999999999999999987 89987654

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=84.32  E-value=3.7  Score=22.72  Aligned_cols=50  Identities=8%  Similarity=0.149  Sum_probs=30.7

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEee
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   70 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   70 (138)
                      |+.+.|.|++++.+-..+ .|.++.........+....+++- ++..+++++
T Consensus        66 ~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  116 (118)
T 2i7r_A           66 IIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR  116 (118)
T ss_dssp             EEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEE
T ss_pred             EEEEEECCHHHHHHHHHH-CCCceecCCccccCccEEEEEECCCccEEEEEe
Confidence            799999999999999987 78876443221112223333332 344666654

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=82.52  E-value=1.9  Score=24.78  Aligned_cols=55  Identities=7%  Similarity=-0.036  Sum_probs=34.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      .+..|+.+.|.|++++.+-.++  |.++.........+....+++- ++..+++++..
T Consensus        73 ~~~~~~~~~v~dv~~~~~~l~~--G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           73 RRNMLLYFEHADVDAAFQDIAP--HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CSSCEEEEEESCHHHHHC-CGG--GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             CCceEEEEEeCcHHHHHHHHHc--CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            4678999999999999988887  8876543221112223344433 45577776543

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=82.47  E-value=3.7  Score=23.63  Aligned_cols=28  Identities=14%  Similarity=0.106  Sum_probs=24.5

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTL  113 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  113 (138)
                      .+.|+.+.|.|+++..+-+++ .|.++..
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   36 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIE   36 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECG
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeec
Confidence            578999999999999999987 7988754

>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}

Probab=81.67  E-value=1.5  Score=29.24  Aligned_cols=95  Identities=16%  Similarity=0.229  Sum_probs=60.4

Q ss_pred             eeeEEEEeC-----CHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC---eEEEE--eecCCCCC-----------
Q 032542           18 VHHVGILCE-----NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA---EMIHL--MELPNPDP-----------   76 (138)
Q Consensus        18 l~hi~l~v~-----d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~l--~~~~~~~~-----------   76 (138)
                      .+|+++++=     .++...+++.. ||++...............|++..+   .++-+  ..+..-.+           
T Consensus        39 nDHiA~RT~~~~~~gi~~la~~F~~-lGY~~~G~Y~f~~kkL~A~~f~hpd~~~prvFiSEL~ve~lS~~~q~~i~~~v~  117 (267)
T 3lho_A           39 NDHIALRTFNIAKVNLSVLAKHFTS-IGYVDSGDYKFEQKKLIAKHFEHPDPKQPKVFISELLVEEFSPEVQKSIHGLID  117 (267)
T ss_dssp             EEEEEEEEESCGGGCHHHHHHHHHT-TTCEEEEEEEETTTTEEEEEEECSSTTSCEEEEEEECGGGSCHHHHHHHHHHHT
T ss_pred             cceEEEEecCCCCccHHHHHHHHHH-cCCeEcceeccCCCccEEEEeCCCCCCCCeEEEeeccHhhCCHHHHHHHHHHHh
Confidence            678888862     57788888886 9999987665555555556665432   11111  11110000           


Q ss_pred             -------------CCCCC----------------------CCCCCccEEEEEE------CCHHHHHHHHHHCCCeEEe
Q 032542           77 -------------LSGRP----------------------EHGGRDRHTCIAI------RDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        77 -------------~~~~~----------------------~~~~~~~hi~~~v------~d~~~~~~~l~~~g~~~~~  113 (138)
                                   ....+                      ..+..++|+...|      .|++++.+.|+++|+++..
T Consensus       118 ~~~~~~l~a~~f~~~~~~W~p~~~~Y~~L~~ese~aAWv~~~G~~~NH~T~~v~~L~~~~dI~~v~~~l~~~G~~~n~  195 (267)
T 3lho_A          118 QVDIAATTADNFIYSGRHWDVDKATYQALLAESEYAAWVAALGYRANHFTVSINDLPEFERIEDVNQALKQAGFVLNS  195 (267)
T ss_dssp             TSCGGGGGSTTGGGCBCCSCCCHHHHHHHHHHCHHHHHHHHHCBSCSEEEEETTTCTTCCCHHHHHHHHHHTTCCBCC
T ss_pred             ccChhhcchhhhhhcCCCCCCCHHHHHHHHHhChHHHHHhhcCCccceeehhhcccCCCCCHHHHHHHHHHcCCCccc
Confidence                         00011                      0346678999999      8999999999999998753

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=81.48  E-value=4.8  Score=23.63  Aligned_cols=50  Identities=22%  Similarity=0.215  Sum_probs=32.6

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-CCeeEEEEEe-CCeEEEEeec
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWV-GAEMIHLMEL   71 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~-~~~~~~l~~~   71 (138)
                      |+.+.|.|++++.+-.++ .|.++........ .+ ..+++.- ++..+++++.
T Consensus        93 ~l~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  144 (148)
T 2r6u_A           93 VVTVDVESIESALERIES-LGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWET  144 (148)
T ss_dssp             EEEEECSCHHHHHHHHHH-TTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEE
T ss_pred             EEEEEcCCHHHHHHHHHH-cCCeEecCCeecCCCE-EEEEEECCCCCEEEEEec
Confidence            899999999999999987 7988764321111 12 3334433 3557777654

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=80.03  E-value=6.1  Score=22.26  Aligned_cols=56  Identities=16%  Similarity=0.290  Sum_probs=36.3

Q ss_pred             eeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecC
Q 032542           16 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELP   72 (138)
Q Consensus        16 ~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~   72 (138)
                      .++.|+.+.|.  |++++.+-..+ .|.++..............+++- ++..++++...
T Consensus        65 ~~~~h~~~~v~~~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           65 RTYNHIAFQIQSEEVDEYTERIKA-LGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCSCEEEEECCGGGHHHHHHHHHH-HTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             CCeeEEEEEcCHHHHHHHHHHHHH-CCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            46789999995  99999998887 78887664322111223344443 45677777543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	138
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	9e-14
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	9e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-12
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-11
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-10
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	6e-10
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	7e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	2e-09
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-07
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-07
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	2e-07
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	5e-07
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-07
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	6e-07
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	9e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-06
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	3e-06
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	5e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	7e-06
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	5e-05
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	8e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	1e-04
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-04
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	2e-04
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	5e-04

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 62.0 bits (149), Expect = 9e-14
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 13  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 69
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 70  ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 125
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 126 PDANALEFTQVDG 138
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 61.6 bits (148), Expect = 9e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 78  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 135
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 56.6 bits (135), Expect = 7e-12
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 78
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 79  GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 133
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 134 TQ 135
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 55.3 bits (132), Expect = 2e-11
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 75
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 76  PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 131
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 132 EF 133
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 53.0 bits (126), Expect = 2e-10
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 133
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 3e-10
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 19  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 64
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 65  -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 112
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 113 -LSKSGRPAIFTRDPDANALEFTQ 135
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 51.6 bits (122), Expect = 6e-10
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 77  LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 133
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 51.9 bits (123), Expect = 7e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 133
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 50.9 bits (121), Expect = 2e-09
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 71
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 72  PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 127
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 128 ANALEFT 134
               E  
Sbjct: 122 GILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 50.3 bits (119), Expect = 3e-09
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 133
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 48.1 bits (113), Expect = 1e-08
 Identities = 12/116 (10%), Positives = 28/116 (24%), Gaps = 9/116 (7%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 82
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 83  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 135
                    +       +      A          +P       RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 45.1 bits (105), Expect = 1e-07
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 78  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 134
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 45.2 bits (106), Expect = 1e-07
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 17  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 76
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 77  LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 132
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 133 FTQV 136
           F ++
Sbjct: 111 FYRM 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 45.4 bits (106), Expect = 2e-07
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---------- 64
            + + HV   C + + + ++YQ   G        + +       +   A+          
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 65  MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 119
           M  L +         +        H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 120 AIF--TRDPDANALEFTQ 135
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.3 bits (106), Expect = 2e-07
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 80  RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 133
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 134 TQVDG 138
               G
Sbjct: 129 MNSKG 133

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 74  PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 109
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 43.8 bits (102), Expect = 5e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 14  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 73
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 74  PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 128
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 129 NALEF 133
           +  E 
Sbjct: 115 HHFEL 119

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 43.9 bits (102), Expect = 6e-07
 Identities = 15/140 (10%), Positives = 40/140 (28%), Gaps = 19/140 (13%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---------------DKLPYRGAWL 59
           ++ + +V I+ E+L+ ++ F++ I       A                  +         
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 60  WVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSK 115
               E+   +  P        P +          + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 116 SGRPAIFTRDPDANALEFTQ 135
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 43.2 bits (100), Expect = 9e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 78  SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 131
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 132 EFTQ 135
           +   
Sbjct: 122 DLFA 125

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 43.2 bits (101), Expect = 2e-06
 Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 13/111 (11%)

Query: 12  DYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGAE 64
           DYG+    H+      L  +  ++    G          +       L            
Sbjct: 4   DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENV 63

Query: 65  MIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 109
           ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 64  LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 41.9 bits (97), Expect = 3e-06
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 127
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 128 ANALEF 133
              LE 
Sbjct: 110 GLPLEI 115

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 41.6 bits (96), Expect = 5e-06
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 129
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 130 ALEF 133
             EF
Sbjct: 124 PYEF 127

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.0 bits (95), Expect = 7e-06
 Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 8/105 (7%)

Query: 13  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 72
           + V  +  V     N +++  +Y    G+++      +      A   +       +   
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 73  NPDPLSGRP--------EHGGRDRHTCIAIRDVSKLKMILDKAGI 109
              P +           EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 69
          +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9  FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 38.6 bits (89), Expect = 5e-05
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 18  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 77
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 78  SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 130
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 131 LEFT 134
           +EF 
Sbjct: 127 VEFG 130

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 37.6 bits (86), Expect = 8e-05
 Identities = 13/120 (10%), Positives = 29/120 (24%), Gaps = 7/120 (5%)

Query: 15  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 74
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 75  DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALEF 133
                       D      + D  +   +    G  +    +     +  +DP    LE 
Sbjct: 56  LDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.9 bits (84), Expect = 1e-04
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 20  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 79
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 80  RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 133
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 37.0 bits (84), Expect = 1e-04
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 82
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 83  HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 134
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 36.5 bits (83), Expect = 2e-04
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 23  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 82
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 83  HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 137
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.0 bits (82), Expect = 5e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 13 YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 71
          + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8  FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 72 PN 73
          P 
Sbjct: 68 PY 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	138
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.94
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.93
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.93
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.92
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.92
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.92
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.92
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.91
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.91
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.91
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.91
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.9
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.89
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.89
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.89
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.89
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.89
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.88
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.88
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.85
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.85
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.85
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.85
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.85
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.84
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.83
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.82
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.8
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.78
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.78
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.69
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.52
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.46
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.45
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.43
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.35
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.32
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.28
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.98
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	98.14
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.94
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.75
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	96.0
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	95.84
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	95.56
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	95.24
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	94.32
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.87
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	93.54
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	92.97
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	92.61
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.72
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.15
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	90.59
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	90.1
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	89.82
d1y9wa1	140	Probable acetyltransferase BC2806 {Bacillus cereus	89.56
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	89.35
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	88.67
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	88.47
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	87.95
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	87.94
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	87.89
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	87.82
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	87.81
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	86.52
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	86.12
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	85.94
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	83.89
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	83.66
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	83.44
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	82.54

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.94  E-value=9.4e-26  Score=132.56  Aligned_cols=111  Identities=16%  Similarity=0.189  Sum_probs=89.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      |+|+|+.|.|+|+++|.+||+++||+++....+      ..+++..|+..+.+........    .. .+...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~----~~-~~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPL----EN-FQSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSC----CC-CCSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCC----CC-CCcceEEEEEEC
Confidence            469999999999999999999999999876533      3467888988888875432211    11 233368999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |+++++++|+++|+++..+    ++|.+.++|+|||||.|||.+.+
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEeC
Confidence            9999999999999987643    66889999999999999999864

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.93  E-value=8.1e-26  Score=141.19  Aligned_cols=121  Identities=12%  Similarity=0.170  Sum_probs=88.8

Q ss_pred             eccCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe---EEEEeecCCCCCCCCCCCCC
Q 032542            8 HICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHG   84 (138)
Q Consensus         8 ~~~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~   84 (138)
                      .++....|+||+||+|.|+|++++.+||+++|||++....+.     ...+...++.   .+.+.....+.   .. ...
T Consensus         3 ~vp~~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~   73 (170)
T d1zswa2           3 EVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ-----EAIFQSIKGEAFGEIVVKYLDGPT---EK-PGR   73 (170)
T ss_dssp             SSCGGGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS-----EEEEESSTTCSTTCEEEEECCSSB---CB-CCB
T ss_pred             CCChhHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc-----eEEEEeccCccceEEEeccccccc---cc-cCc
Confidence            356778899999999999999999999999999999886441     2233322222   12222111111   11 123


Q ss_pred             CCccEEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           85 GRDRHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        85 ~~~~hi~~~v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      ++++|++|.|+|   ++++.+++++.|+++.+.  +++++++||+|||||.|||++.+
T Consensus        74 ~~l~HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          74 GSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             TCEEEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             cccceEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEECC
Confidence            467899999985   778899999999998654  67788999999999999998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.93  E-value=1.1e-24  Score=130.29  Aligned_cols=116  Identities=15%  Similarity=0.227  Sum_probs=89.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |+.+|+||+|.|+|++++++||+++|||++........ ......++..++..+.+.......        ..+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc--------ccceeeeee
Confidence            57899999999999999999999999999987654332 233556777777777765443221        234679999


Q ss_pred             EEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           93 AIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        93 ~v~--d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .++  |+++++++|+++|+++..+    .++++++||+|||||+|||.+.+
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            875  7999999999999998543    45778999999999999998753

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.92  E-value=3.4e-24  Score=129.73  Aligned_cols=114  Identities=24%  Similarity=0.375  Sum_probs=90.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      |+++|+||+|.|+|++++++||+++|||++.....      ...++..++....+........   .+....+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeeccccccc---CCCcCCccceeeee
Confidence            56899999999999999999999999999987644      3455667776666654433322   12233556889998


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEee
Q 032542           94 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~--d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++  |++++.++|+++|+++... ..+++++||+|||||.|||.+.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  8999999999999998764 6688999999999999999765

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.92  E-value=5.8e-24  Score=129.65  Aligned_cols=124  Identities=14%  Similarity=0.222  Sum_probs=92.0

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC-----------CCCCeeEEEEEeC--CeEEEEeecCCCCCC--
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVG--AEMIHLMELPNPDPL--   77 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~l~~~~~~~~~--   77 (138)
                      -++++++|++|.|+|++++.+||++ |||++......           .......+++...  ...++++........  
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4578899999999999999999998 99988764321           2233345666663  346666654322221  


Q ss_pred             -CCCCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           78 -SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        78 -~~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                       ...+....++.|++|.|+|++++.++|+++|+++..+    .++.+.+|++||||+.|||+|.-
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence             1222334567899999999999999999999988543    56778899999999999999863

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.3e-23  Score=126.29  Aligned_cols=111  Identities=22%  Similarity=0.363  Sum_probs=88.2

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      |+.+|+||+|.|+|++++++||+++||+++....+      ...++..++..+...........      ..+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            57899999999999999999999999999887655      34567777777666544433211      2345677777


Q ss_pred             E--CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEee
Q 032542           94 I--RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v--~d~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +  +|++++.++|+++|+++... .++++++||+|||||.|||.+.
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            6  59999999999999998765 5677899999999999999764

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.92  E-value=1.1e-24  Score=132.43  Aligned_cols=122  Identities=16%  Similarity=0.236  Sum_probs=86.4

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCC-eeEEEEEeCC----eEEEEeecCCCCCCCCCCCCCCCc
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD   87 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~-~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~   87 (138)
                      ..+.+|+||+|.|+|++++++||+++||+++.......... ....++..+.    ..+.+...+....   .....+++
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~   78 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR---TYRGTNAI   78 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB---CBCCBSEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccC---CccCCCce
Confidence            46789999999999999999999999999988764322211 1111222111    2343333322211   11223457


Q ss_pred             cEEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCeEEEEeec
Q 032542           88 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        88 ~hi~~~v~d---~~~~~~~l~~~g~~~~~~--~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .|++|.|+|   ++++.++|++.|+.+..+  .++++++||+|||||.|||++.+
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~  133 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  133 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeC
Confidence            899999997   777889999999988654  56889999999999999999865

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.91  E-value=1.8e-24  Score=126.34  Aligned_cols=107  Identities=15%  Similarity=0.218  Sum_probs=81.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeC-CeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      ++|+||.|.|+|++++++||+++|||++......     ...++..+ ...+.+.......        .++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeeccc--------ccccceeeeee
Confidence            5799999999999999999999999999876442     23344433 3455555443222        24468999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCeEEEEe
Q 032542           95 RD---VSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        95 ~d---~~~~~~~l~~~g~~~~~~-~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +|   ++++.+++++.|+++..+ ..+++++|++|||||.|||.+
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            86   667889999999987655 456789999999999999974

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.91  E-value=7.1e-24  Score=127.09  Aligned_cols=106  Identities=17%  Similarity=0.175  Sum_probs=84.3

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe--EEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      +|++|+||.|.|+|++++++||+++|||++.....      ..++++.++.  .+.+..  ..         ..++.|++
T Consensus         1 ~I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~--~~---------~~~~~h~~   63 (131)
T d1lgta1           1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQ--GE---------VDDLAFAG   63 (131)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEE--CT---------TCEEEEEE
T ss_pred             CcccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEec--CC---------CCCceEEE
Confidence            47899999999999999999999999999987644      4577877654  343332  11         14578999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEee
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |.|.   +++++.++|+++|+++...       .++.+.+||+|||||.||++..
T Consensus        64 f~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          64 YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             EEEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            9996   5677899999999998754       3466889999999999999753

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.91  E-value=1.4e-23  Score=130.03  Aligned_cols=116  Identities=15%  Similarity=0.234  Sum_probs=84.3

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      |..++++||+|.|+|++++++||+++|||++..............++..+...........+        ..++..|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP--------EKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS--------SSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccC--------CCCccceeEE
Confidence            56678999999999999999999999999998765544443344444444332111111111        1245789999


Q ss_pred             EECCHH---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           93 AIRDVS---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~d~~---~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .+.+++   ++.++|++.|+++..+     .++.+++|++|||||.|||++.
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            998655   6789999999987643     3356899999999999999874

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=7.9e-24  Score=126.66  Aligned_cols=118  Identities=20%  Similarity=0.328  Sum_probs=83.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe----EEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      |++.|++|.|+|+++|++||+++|||++..............++.....    ..........    .......+..|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV----DKYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC----CCCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc----ccccccccceeec
Confidence            4699999999999999999999999998876543333333333333211    1111111111    1122335568999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEeec
Q 032542           92 IAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        92 ~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +.+++++++.+++++.|..+...     .++.+++|++|||||.|||+|.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            99999999999999999987543     44678899999999999999865

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.90  E-value=1e-23  Score=127.94  Aligned_cols=124  Identities=14%  Similarity=0.232  Sum_probs=91.0

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEE------eCCeEEEEeecCCCCCCCC----CCCC
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSG----RPEH   83 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~----~~~~   83 (138)
                      ++++|+||+|.|+|+++|.+||+++||++..........+...++..      .+...+++++.........    ....
T Consensus         4 m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~   83 (145)
T d1jc4a_           4 LFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNG   83 (145)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTT
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCC
Confidence            37899999999999999999999999999876654444333333322      2456888887654432211    1123


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCeEEEEeec
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  137 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~--~DPdG~~~e~~~~~  137 (138)
                      ..++.|+||.|+|++++.++|+++|+++..+     ..+.+.+|+  +||+|++|||+|.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            4678999999999999999999999998532     234444445  78999999999974

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.89  E-value=3.4e-23  Score=124.23  Aligned_cols=106  Identities=13%  Similarity=0.157  Sum_probs=83.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      |.+|+||.|.|+|++++++||+++|||++.....      ..+|++.++....+......         ..+..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC---------CCCceEEEEEe
Confidence            6789999999999999999999999999887644      45778876553222222221         14578999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEe
Q 032542           95 R---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        95 ~---d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +   |++++.++++++|+++.+.       +...+.+||+|||||.|||+.
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            6   5778899999999998764       235678999999999999985

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.89  E-value=1.2e-22  Score=121.02  Aligned_cols=117  Identities=20%  Similarity=0.257  Sum_probs=83.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCC--CCCCCCCCCCCCccEEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP--DPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~hi~~~   93 (138)
                      +|+|++|.|+|++++++||++ ||+.+........    .+.+.. +...+.+......  ..........++..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            689999999999999999977 8998876554322    233333 3445555432211  1111112233455799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeecC
Q 032542           94 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        94 v~d---~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      |++   +++++++|+++|+++..+    ++|++.+|++|||||.|||+++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            986   677899999999987644    567899999999999999999865

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.89  E-value=9.3e-23  Score=124.23  Aligned_cols=117  Identities=19%  Similarity=0.191  Sum_probs=84.8

Q ss_pred             ceeccCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeE-EEEeecCCCCCCCCCCCCC
Q 032542            6 LFHICLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHG   84 (138)
Q Consensus         6 ~~~~~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~   84 (138)
                      .....+...+++|+||.|.|+|++++++||+++|||++.....      ...++...+.. .........        ..
T Consensus         5 p~p~~p~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~   70 (146)
T d1f1ua1           5 PTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG--------PI   70 (146)
T ss_dssp             CCCSSCCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC--------SS
T ss_pred             CCCCCCCCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeecccc--------CC
Confidence            3444455679999999999999999999999999999988644      23444432221 110111111        12


Q ss_pred             CCccEEEEEEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           85 GRDRHTCIAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .++.|++|.+.   |++++.++|+++|+++...     .+.++++||+|||||.|||+..
T Consensus        71 ~~~~h~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          71 AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             CCCceeeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            45789999997   6888899999999998643     3346899999999999999864

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-22  Score=124.38  Aligned_cols=125  Identities=17%  Similarity=0.218  Sum_probs=87.2

Q ss_pred             ceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCC-------------------eEEEEeecCC
Q 032542           13 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPN   73 (138)
Q Consensus        13 ~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~   73 (138)
                      ...-+++|++|.|+|+++|++||+++|||++.............+++..+.                   ....+.....
T Consensus        19 ~~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (176)
T d1qipa_          19 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG   98 (176)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeec
Confidence            444569999999999999999999999999876554444444444444321                   1122222211


Q ss_pred             C--C-CCC--CCCCCCCCccEEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           74 P--D-PLS--GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        74 ~--~-~~~--~~~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .  . ...  .......++.|+++.++|++++.++|+++|+++..+   ..+.+.+|++|||||.|||+|..
T Consensus        99 ~~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_          99 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GGGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             cccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            1  1 111  111233577899999999999999999999999865   23456688999999999999864

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=7e-23  Score=123.50  Aligned_cols=118  Identities=14%  Similarity=0.146  Sum_probs=84.3

Q ss_pred             eeeeeeEEEEe----CCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEE--EEeecCCCCCCCCCCCCCCCcc
Q 032542           15 VVSVHHVGILC----ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI--HLMELPNPDPLSGRPEHGGRDR   88 (138)
Q Consensus        15 ~~~l~hi~l~v----~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~   88 (138)
                      +.++.|+.++|    +|++++++||+++|||++....... .....+++..++..+  .+........    +....+..
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~   77 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDS   77 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTC
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCceeeeccccccccc----ccccccCc
Confidence            44566666665    8999999999999999987654322 234566676655433  3333332221    22234568


Q ss_pred             EEEEEECC---HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEeec
Q 032542           89 HTCIAIRD---VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        89 hi~~~v~d---~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      |++|.|++   +++++++|++.|+++..+   .++.+.+||+||||++|||....
T Consensus        78 hlaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          78 LLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             eEEEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            99999976   777889999999998765   34678899999999999998754

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=2.7e-22  Score=116.48  Aligned_cols=106  Identities=18%  Similarity=0.214  Sum_probs=77.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEEC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR   95 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~   95 (138)
                      +++ +..|.|+|+++|++||+++|||++....+      ....+..++....+........      .+....|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG------SGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB------TTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccC------CCCceeEEEEEec
Confidence            344 47899999999999999999999887644      2233444333333322222211      1233468999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEE
Q 032542           96 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  134 (138)
Q Consensus        96 d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~  134 (138)
                      |++++++++++.|+++..+    ++|.+.++++|||||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999999999987543    66889999999999999985

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.88  E-value=1.7e-22  Score=121.17  Aligned_cols=118  Identities=21%  Similarity=0.275  Sum_probs=84.8

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe---EEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      .++.|++|.|+|+++|++||+++|||++.....................   ...........   ..........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            4799999999999999999999999999876543333222222222211   11111111111   11122345568999


Q ss_pred             EECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           93 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .+++++++.+++...++++...+.+.+.+||+|||||+|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888888999999999999999985

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.85  E-value=4.3e-20  Score=108.63  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=80.4

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHHH
Q 032542           22 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  101 (138)
Q Consensus        22 ~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~  101 (138)
                      .|.|+|+++|++||++ |||++.....      ..+++..++..+.+.......+.       ....++.+.+++++++.
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            3899999999999998 9999987544      34556667777777665543221       23467999999999999


Q ss_pred             HHHHHCCCeEEe-----------cCCCceEEEEECCCCCeEEEEeec
Q 032542          102 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus       102 ~~l~~~g~~~~~-----------~~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +++++.|+.+..           .++|.+.+||+|||||+|||+|.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999887532           156889999999999999999975

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.85  E-value=4.8e-21  Score=118.50  Aligned_cols=126  Identities=13%  Similarity=0.112  Sum_probs=95.2

Q ss_pred             CceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC--CCCCeeEEEEEeCCeEEEEeecCCCCCCCCC------CCC
Q 032542           12 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPLSGR------PEH   83 (138)
Q Consensus        12 ~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~------~~~   83 (138)
                      ++.+.+++||.|.|+|+++|++||+++|||++......  .........++.++..+.+............      ..+
T Consensus         2 p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           2 PFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcC
Confidence            35688999999999999999999999999998865432  2223344556778888888776544321100      123


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCeEEEEeec
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~-------~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                      +.++.|+||+|+|+++++++|+++|+++..+       .+..+..++++|+|..++|+|..
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            5678999999999999999999999987543       22346789999999999998863

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.85  E-value=4.7e-21  Score=119.96  Aligned_cols=112  Identities=17%  Similarity=0.225  Sum_probs=79.1

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +++|+||+|.|+|++++++|| ++|||++.............+|+..+.....+.....+         .++.+|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            568999999999999999999 67999998765544443445566654332222212111         24578999999


Q ss_pred             CCHH---HHHHHHHHCCCeE--Eec-----CCCceEEEEECCCCCeEEEEee
Q 032542           95 RDVS---KLKMILDKAGISY--TLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d~~---~~~~~l~~~g~~~--~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .+++   ++.++|+++|+..  ...     .+...++|++|||||.+|++..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            8655   5567999999853  222     3345689999999999999864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.85  E-value=6.9e-21  Score=115.53  Aligned_cols=108  Identities=18%  Similarity=0.192  Sum_probs=76.1

Q ss_pred             eeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCe-E-EEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           14 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-M-IHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        14 ~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      .+++|+||.|.|+|++++++||+++|||++........     .+....+. . ..+......         ..+..|++
T Consensus         4 ~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~   69 (145)
T d1mpya1           4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (145)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             CCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeeccccccC---------cccceeee
Confidence            47899999999999999999999999999887644221     12222221 1 111111111         12346777


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCeEEEEe
Q 032542           92 IAIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        92 ~~v~---d~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +.+.   |++++.++|+++|+++...     ++.++++||+|||||.|||++
T Consensus        70 ~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~  121 (145)
T d1mpya1          70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYA  121 (145)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEES
T ss_pred             eeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEE
Confidence            7764   7888999999999988643     234589999999999999985

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.8e-21  Score=115.90  Aligned_cols=128  Identities=14%  Similarity=0.092  Sum_probs=93.6

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC--CCCeeEEEEEeCCeEEEEeecCCCCCCCC---CCCCC
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDPLSG---RPEHG   84 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~   84 (138)
                      +..-++.+++||+|.|+|+++|++||+++|||+........  ........+..++..+.+...........   ...++
T Consensus         4 p~~~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g   83 (149)
T d1sqia1           4 PERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHG   83 (149)
T ss_dssp             CSSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             CCCCceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCC
Confidence            44567889999999999999999999999999987654322  22223344556777888876544332111   01245


Q ss_pred             CCccEEEEEECCHHHHHHHHHHCCCeEEec------CCC-ceEEEEECCCCCeEEEEeec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDKAGISYTLS------KSG-RPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~------~~~-~~~~~~~DPdG~~~e~~~~~  137 (138)
                      .++.|+||.|+|+++++++|+++|+++..+      ..| .+.++++.|+|..++|+|.+
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             CeEEEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            678999999999999999999999987533      222 24678888889999999965

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.84  E-value=1.4e-20  Score=115.65  Aligned_cols=113  Identities=15%  Similarity=0.196  Sum_probs=77.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCC---CCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC   91 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~   91 (138)
                      .+||+|++|.|+|++++++||+++|||++......   ........++..+.....+.....+        ...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~--------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP--------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS--------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCC--------CCCceeEEE
Confidence            36899999999999999999999999998754321   1111223444444332222111111        124689999


Q ss_pred             EEECCHH---HHHHHHHHCCCeEEec----CCCceEEEEECCCCC-eEEEEe
Q 032542           92 IAIRDVS---KLKMILDKAGISYTLS----KSGRPAIFTRDPDAN-ALEFTQ  135 (138)
Q Consensus        92 ~~v~d~~---~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~-~~e~~~  135 (138)
                      |+|++++   ++.++|+++|+.+..+    .+...++|++||+|+ .+|+..
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             EECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            9998655   4689999999876433    245678999999998 589865

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.83  E-value=5.8e-20  Score=108.23  Aligned_cols=101  Identities=17%  Similarity=0.189  Sum_probs=80.8

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHHH
Q 032542           22 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  101 (138)
Q Consensus        22 ~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~  101 (138)
                      .|.|+|+++|++||+++|||++....+      ..+++..++..+.+........        ....++.+.++|++++.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHH
Confidence            489999999999999999999887644      3567788888888876654322        22468999999999999


Q ss_pred             HHHHHCCCeEEec-----------CCCceEEEEECCCCCeEEEEee
Q 032542          102 MILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus       102 ~~l~~~g~~~~~~-----------~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++++.+......           .++++++|++|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999998764211           4567899999999999999864

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=3.6e-19  Score=110.31  Aligned_cols=129  Identities=14%  Similarity=0.110  Sum_probs=92.6

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCC--CeeEEEEEeCCeEEEEeecCCCCCCC---------
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLS---------   78 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~---------   78 (138)
                      +..+++.+++||+|.|+|++++++||+++|||+..........  ......+..++..+.+..........         
T Consensus         5 ~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~   84 (167)
T d1sqda1           5 SDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTA   84 (167)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             CCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccc
Confidence            4557899999999999999999999999999998766433221  11222244455555554322111100         


Q ss_pred             CCC------------CCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeecC
Q 032542           79 GRP------------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  138 (138)
Q Consensus        79 ~~~------------~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~~  138 (138)
                      ..+            .++.++.|+||.|+|+++++++|+++|+++..+    .++.+..+++.+.+...+|+++.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          85 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             ccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence            000            123578999999999999999999999987644    567788899999999999998753

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.80  E-value=1.6e-18  Score=107.86  Aligned_cols=128  Identities=13%  Similarity=0.104  Sum_probs=92.5

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCC--CeeEEEEEeCCeEEEEeecCCCCCCCC---CC---
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL--PYRGAWLWVGAEMIHLMELPNPDPLSG---RP---   81 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~---   81 (138)
                      +....+.+++||+|.|+|++++++||++.|||+..........  ......+..++..+.+...........   .+   
T Consensus         6 ~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (172)
T d1sp8a1           6 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS   85 (172)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCC
Confidence            3457789999999999999999999999999999865443222  122223444666665544332211100   00   


Q ss_pred             ---------CCCCCccEEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEeec
Q 032542           82 ---------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  137 (138)
Q Consensus        82 ---------~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~~  137 (138)
                               .++.++.|+||.|+|+++++++|+++|+++..+    .++.+..+++.|.+...+|+|..
T Consensus        86 ~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          86 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             cchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence                     135678999999999999999999999998654    45677888898988889999865

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=6e-18  Score=101.27  Aligned_cols=115  Identities=10%  Similarity=0.033  Sum_probs=80.9

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-------CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++.+.++|+++|.+||+++||+++........       .....+.+.+++..+.+......... ..+...+...++++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGF-STAKSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTC-CCCCTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeecccccccccc-ccCCCCCcceEEEE
Confidence            35566779999999999999999876533211       12234567778877766554322211 11222233468999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           93 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        93 ~v~d~~~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .++|+++++.++.++|+++..+    ++|.+.++++||+|+.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            9999999999999999998765    568899999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.78  E-value=5e-18  Score=99.32  Aligned_cols=100  Identities=12%  Similarity=0.143  Sum_probs=77.4

Q ss_pred             EEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEECCHHHHH
Q 032542           22 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  101 (138)
Q Consensus        22 ~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v~d~~~~~  101 (138)
                      .|.|+|++++++||+++|||++....+      ...++..++..+.+........        .+..++.+.+++++.+.
T Consensus         9 vL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~   74 (120)
T d1xrka_           9 VLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDELY   74 (120)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHHHH
T ss_pred             EEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHHHH
Confidence            389999999999999999999988654      3466777888888876654432        23467889999999998


Q ss_pred             HHHHHCCCeEE--------ec---CCCceEEEEECCCCCeEEEEe
Q 032542          102 MILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus       102 ~~l~~~g~~~~--------~~---~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      +++.+.+.+..        .+   .++++++|++|||||.|||++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          75 AEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            88877665431        11   345689999999999999986

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.69  E-value=2.4e-17  Score=100.22  Aligned_cols=119  Identities=10%  Similarity=0.064  Sum_probs=86.6

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEeCCeEEEEeecCCCCCCCC--CCCCCCCcc
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDR   88 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~   88 (138)
                      .+|.+.|++||.+.|+|++++.+||++ |||+........    ....++.|+..+.+-.  .......  ...++.++.
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~~--~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILNN--EPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEEC--CSSSHHHHHHHHHSSEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEecC--CCCCHhHhHHhhCCCceE
Confidence            356789999999999999999999987 999988764422    2333555665544422  2211111  123678899


Q ss_pred             EEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCeEEEEee
Q 032542           89 HTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        89 hi~~~v~d~~~~~~~l~~~g~~~~~~---~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      |++|+|+|+++++++++++|+++...   .+......+++|+|.++.|+++
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            99999999999999999999987644   3344456778888888888875

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.52  E-value=7.6e-14  Score=89.53  Aligned_cols=100  Identities=14%  Similarity=0.121  Sum_probs=68.9

Q ss_pred             CCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC-----CCCCCeeEEEEEeC--CeEEEEeecCCCCCCCCCC--
Q 032542           11 LDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRP--   81 (138)
Q Consensus        11 ~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~--   81 (138)
                      +...+++++||++.|+|++++..||+++|||+......     ..........+..+  ...+.+.....+.......  
T Consensus         3 ~d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~   82 (224)
T d1sp8a2           3 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT   82 (224)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHH
Confidence            45678999999999999999999999999998765432     12223344444443  3456666544332211111  


Q ss_pred             ----CCCCCccEEEEEECCHHHHHHHHHHCCCe
Q 032542           82 ----EHGGRDRHTCIAIRDVSKLKMILDKAGIS  110 (138)
Q Consensus        82 ----~~~~~~~hi~~~v~d~~~~~~~l~~~g~~  110 (138)
                          ..+.|++||||.|+|+.++.++|+++|+.
T Consensus        83 FL~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          83 FLDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence                13468999999999999999999988743

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.46  E-value=7.1e-12  Score=74.56  Aligned_cols=106  Identities=14%  Similarity=0.035  Sum_probs=71.6

Q ss_pred             CCHHHHHHHHHHhhCCeeeccCCCCC------------CCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEE
Q 032542           26 ENLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA   93 (138)
Q Consensus        26 ~d~~~a~~fy~~~lg~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~   93 (138)
                      .|.++|.+||+++||+++........            .....+.+.+++..+.........     +...+...++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PYEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CCCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cccCCCcEEEEEE
Confidence            39999999999999999865321111            112335577777666554332221     1122344678888


Q ss_pred             ECCHH--HHHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           94 IRDVS--KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        94 v~d~~--~~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +++.+  +.+.++.++|.++..+    ++|.+..+++||+|+.|+|...
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            88655  4466666789888644    7788999999999999999764

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.45  E-value=1.8e-13  Score=86.63  Aligned_cols=100  Identities=14%  Similarity=0.095  Sum_probs=67.8

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCC--CCCCCeeEEEEEeCC--eEEEEeecCCCCCC-CCC-C--CC
Q 032542           14 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGA--EMIHLMELPNPDPL-SGR-P--EH   83 (138)
Q Consensus        14 ~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~--~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~-~~~-~--~~   83 (138)
                      .++.++||++.|+  |++++..||+++|||+......  ..........+...+  ..+.+......... ... .  ..
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            3678999999997  9999999999999999876543  222222333344432  23333322221110 000 0  14


Q ss_pred             CCCccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      +.|++||||.|+|+.++.++|+++|+++..
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            578999999999999999999999998753

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=6.5e-13  Score=84.26  Aligned_cols=102  Identities=12%  Similarity=0.072  Sum_probs=68.7

Q ss_pred             cCCceeeeeeeEEEEeCC--HHHHHHHHHHhhCCeeeccCCC-----CCCCeeEEEEEeCC--eEEEEeecCCCCCCCCC
Q 032542           10 CLDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGR   80 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d--~~~a~~fy~~~lg~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~   80 (138)
                      .+...+..++||++.|++  ++++.+||+++|||+.......     .....+...+..++  ..+.+....... ....
T Consensus        17 ~p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~-~~sq   95 (210)
T d1sqia2          17 LPSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGR-KKSQ   95 (210)
T ss_dssp             SCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC------CH
T ss_pred             CCCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCC-cccH
Confidence            345678899999999987  9999999999999987654321     11222334455433  345554332211 1111


Q ss_pred             ------CCCCCCccEEEEEECCHHHHHHHHHHCCCeEE
Q 032542           81 ------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  112 (138)
Q Consensus        81 ------~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~  112 (138)
                            ...+.|++||||.|+|+.++.++|+++|+++.
T Consensus        96 i~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL  133 (210)
T d1sqia2          96 IQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFL  133 (210)
T ss_dssp             HHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBC
T ss_pred             HHHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCC
Confidence                  02467899999999999999999999999874

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.35  E-value=1.9e-12  Score=81.47  Aligned_cols=100  Identities=13%  Similarity=0.131  Sum_probs=67.5

Q ss_pred             eeeeeeeEEEEeC--CHHHHHHHHHHhhCCeeeccCC-----CCCCCeeEEEEEeCC--eEEEEeecCCCCCCC--CC--
Q 032542           14 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWVGA--EMIHLMELPNPDPLS--GR--   80 (138)
Q Consensus        14 ~~~~l~hi~l~v~--d~~~a~~fy~~~lg~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~--~~--   80 (138)
                      +.++++||++.|+  +++++..||+++|||+......     .........-+..++  ..+.+-.........  ..  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            4568999999998  9999999999999998876432     122223333344333  344443222111111  00  


Q ss_pred             -CCCCCCccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           81 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        81 -~~~~~~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                       ...++|++||||.|+|+.++.++|+++|+++..
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~  116 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLD  116 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCC
Confidence             023568999999999999999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.32  E-value=3.8e-12  Score=81.76  Aligned_cols=100  Identities=16%  Similarity=0.155  Sum_probs=67.3

Q ss_pred             cCCceeeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC-----CCeeEEEEEeC--CeEEEEeecCCCCCCCCC--
Q 032542           10 CLDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNPDPLSGR--   80 (138)
Q Consensus        10 ~~~~~~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~--   80 (138)
                      +.+..+.+++||++.|+|++++.+||.++||+..........     ......-+..+  ...+.+.+...+......  
T Consensus        15 ~~~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~   94 (230)
T d1sqda2          15 PLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQ   94 (230)
T ss_dssp             CCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHH
T ss_pred             CCCCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHH
Confidence            344568999999999999999999999999998776543221     22223333332  345666554333211111  


Q ss_pred             ----CCCCCCccEEEEEECCHHHHHHHHHHCCC
Q 032542           81 ----PEHGGRDRHTCIAIRDVSKLKMILDKAGI  109 (138)
Q Consensus        81 ----~~~~~~~~hi~~~v~d~~~~~~~l~~~g~  109 (138)
                          ...+.|++||||.|+|+.++.++|+++|.
T Consensus        95 ~FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          95 TYLEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HHHhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence                12467899999999999999999999754

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.28  E-value=1e-09  Score=64.85  Aligned_cols=110  Identities=9%  Similarity=0.045  Sum_probs=72.0

Q ss_pred             eEEEEeCCHHHHHHHHHHhhCCeeeccC-------CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEE
Q 032542           20 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI   92 (138)
Q Consensus        20 hi~l~v~d~~~a~~fy~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~   92 (138)
                      ++.+.-++.++|.+||+++||.+.....       +........+.|++++..+.+.........     ..+...++++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~-----~~~~~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAF-----DFTPAFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSC-----CCCTTEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCC-----CCCCceEEEE
Confidence            4455556899999999999998654221       112233345678888888777654322211     1122357888


Q ss_pred             EECCHHHH---HHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEe
Q 032542           93 AIRDVSKL---KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  135 (138)
Q Consensus        93 ~v~d~~~~---~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~  135 (138)
                      .+++.++.   .+.| +.|.++..+    .++.+...++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEAL-SDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHH-HTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHH-hcCCEEecCcccccccceEEEEECCCCCEEEEEc
Confidence            88765543   4554 556666543    678899999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.98  E-value=3.3e-08  Score=57.80  Aligned_cols=104  Identities=9%  Similarity=0.098  Sum_probs=66.4

Q ss_pred             EEeC-CHHHHHHHHHHhhCCeeeccC-------CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           23 ILCE-NLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        23 l~v~-d~~~a~~fy~~~lg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      |..+ |.++|.+||+++||-..+...       +........+.+++++..+.+........         ...++.+.+
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~---------~~~s~~v~~   80 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTE---------LPISLFVTV   80 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCC---------CCEEEEecc
Confidence            4555 999999999999976433211       12223345667888888776654332211         123577888


Q ss_pred             CCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCeEEEEee
Q 032542           95 RDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d~~~---~~~~l~~~g~~~~~~----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.++   +.++|.+ |.++..+    +++.+...++||.|+.|.|..+
T Consensus        81 ~~~~e~~~~~~~L~~-gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          81 KDTIEMERLFNGLKD-EGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             SSHHHHHHHHHHHHT-TCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHhcc-CCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            87665   4566654 5465433    6788889999999999999754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.14  E-value=0.00014  Score=43.29  Aligned_cols=101  Identities=13%  Similarity=-0.050  Sum_probs=62.6

Q ss_pred             EEeCCHHHHHHHHHHhhCCeeeccC--------CCCCCCeeEEEEEeCCeEEEEeecCCCCCCCCCCCCCCCccEEEEEE
Q 032542           23 ILCENLERSLEFYQNILGLEINEAR--------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI   94 (138)
Q Consensus        23 l~v~d~~~a~~fy~~~lg~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~hi~~~v   94 (138)
                      +.-.+-++|.+||.++||-..+...        +........+.+.+++..+...... +.    .+ . +...++.+.+
T Consensus         8 ~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~-~~----~~-~-~~~~sl~l~~   80 (156)
T d1u69a_           8 WYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PA----FR-H-SEAFSFQVAT   80 (156)
T ss_dssp             EESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TT----CC-C-CTTEEEEEEE
T ss_pred             eECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCC-CC----CC-C-CCCeEEEEec
Confidence            4457999999999999965432211        1122234566788887766544321 11    11 1 2236788888


Q ss_pred             CC---HHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           95 RD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        95 ~d---~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      +|   ++++.++|.+.|- +..+     ...++|..|..|.|..+
T Consensus        81 d~~eE~d~~f~~LsegG~-~~~~-----~G~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          81 DDQAETDRLWNAIVDNGG-EESA-----CGWCRDKWGISWQITPR  119 (156)
T ss_dssp             SSHHHHHHHHHHHHHTTC-EECS-----TTEEECTTSCEEEEEEH
T ss_pred             CCHHHHHHHHHHHhccCC-CCCC-----CeEEECCCCCEEEeChH
Confidence            86   5566788877663 3322     22699999999999853

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.94  E-value=0.0023  Score=37.92  Aligned_cols=59  Identities=15%  Similarity=0.078  Sum_probs=43.5

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD   75 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~   75 (138)
                      .+++||+|.|+|++++.+...+ .|.+..........+.+.++++. |+..+.|+......
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            3899999999999999999998 79987765332233345555544 88888898876543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.75  E-value=0.0027  Score=37.87  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=45.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP   74 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~   74 (138)
                      .++.||+|.|+|++++.+-+.+ .|.++.........+.+.++++. |+..+.|++..+.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            4899999999999999999997 89987765433333456666665 7888999987754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=96.00  E-value=0.021  Score=30.91  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=39.2

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCeEEEEee
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      ++.|+.+.|+|+++..+-+++ .|.++.... +....++.++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR-GNAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE-TTTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEee-cCcceeeeecceeeeeeeee
Confidence            468999999999999999887 799886543 34466777888888877653

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=95.84  E-value=0.026  Score=32.10  Aligned_cols=55  Identities=16%  Similarity=0.180  Sum_probs=37.9

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEee
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME   70 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~   70 (138)
                      ..++.|+++.|.|++++.+.+++ .|.++.............+|++- ++..++|++
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e  146 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAE  146 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEE
Confidence            45799999999999999999997 89988654322223334455543 245666654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=95.56  E-value=0.018  Score=32.54  Aligned_cols=57  Identities=14%  Similarity=0.238  Sum_probs=39.5

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCC-CCCeeEEEEEe---CCeEEEEeecC
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWV---GAEMIHLMELP   72 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~-~~~~~~~~~~~---~~~~~~l~~~~   72 (138)
                      ..++.|+++.|.|++++.+-.++ .|.++....+.. ..+....|+..   ++..++|++.+
T Consensus        84 ~~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          84 RAGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            45799999999999999999998 799876543211 22234445532   45678887754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=95.24  E-value=0.041  Score=31.94  Aligned_cols=56  Identities=11%  Similarity=0.041  Sum_probs=40.4

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   73 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   73 (138)
                      .+++||++.|+|++++.+...+ +|.++...... ........++. |+..+.|+...+
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~-~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTG-PMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCC-TTCBCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCC-CCceeeeEEEcCCCCEEEEECcCC
Confidence            5899999999999999999997 99988765432 22223333444 677888876543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.082  Score=30.14  Aligned_cols=58  Identities=19%  Similarity=0.059  Sum_probs=39.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC---CCCCCeeEEEEEe-CCeEEEEeecCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARP---HDKLPYRGAWLWV-GAEMIHLMELPNP   74 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~---~~~~~~~~~~~~~-~~~~~~l~~~~~~   74 (138)
                      .++.|+++.|.|++++.+-..+ .|.+......   +.......++++. |+..+.|++..+.
T Consensus        84 ~G~~hiaf~V~di~~~~~~l~~-~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          84 DGVKDIAFEVEDCEHIVQKARE-RGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHH-HTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             CeEEEEEEEeccHHHHHHHHHH-CCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            4799999999999999999998 8987765321   1111223344443 5677788876544

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.87  E-value=0.13  Score=29.75  Aligned_cols=52  Identities=12%  Similarity=0.103  Sum_probs=36.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec-----CCCceEEEEECCCCCeEEEEee
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KSGRPAIFTRDPDANALEFTQV  136 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~-----~~~~~~~~~~DPdG~~~e~~~~  136 (138)
                      .++.|++|.|.|++++.+.+++ .|.+....     .......++....+..+++.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            4588999999999999999987 79887532     2223334444445666777653

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=93.54  E-value=0.11  Score=28.64  Aligned_cols=48  Identities=15%  Similarity=0.150  Sum_probs=32.5

Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCeEEE
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  133 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~DPdG~~~e~  133 (138)
                      .+.|+++.|.|+++..+-.++.|..+...........+..+++..+.+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~   49 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAW   49 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeee
Confidence            478999999999999999988887765442222234444444555544

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.97  E-value=0.13  Score=29.00  Aligned_cols=41  Identities=17%  Similarity=0.079  Sum_probs=28.4

Q ss_pred             eeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEE
Q 032542           17 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL   59 (138)
Q Consensus        17 ~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~   59 (138)
                      +...+.+.+.+. .+.+||++ +||+.....+....+...+++
T Consensus        93 g~~~i~l~~~n~-~a~~fY~k-~GF~~~g~~~~~~~~~~~~~m  133 (137)
T d2g3aa1          93 GCMGAYIDTMNP-DALRTYER-YGFTKIGSLGPLSSGQSITWL  133 (137)
T ss_dssp             TCCEEEEEESCH-HHHHHHHH-HTCEEEEEECCCTTSCCEEEE
T ss_pred             CCceEEEecccH-hhHHHHHh-CCCEEEEEECCCCCCCcEEEE
Confidence            456677777775 47999998 899998876654443344444

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=92.61  E-value=0.21  Score=27.76  Aligned_cols=48  Identities=17%  Similarity=0.113  Sum_probs=33.4

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCC-CCeEEEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  135 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~~~~~~~~~~DPd-G~~~e~~~  135 (138)
                      ++.|+++.|+|++++.+-.++ .|.++....++  .++++-.+ .+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            478999999999999999999 59988765332  34444333 34455443

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.72  E-value=0.29  Score=28.54  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=27.1

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEecC
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  115 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~~  115 (138)
                      .+++||++.|.|+++..+-+++ .|.++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            5789999999999999999998 698887653

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.15  E-value=0.65  Score=25.77  Aligned_cols=55  Identities=9%  Similarity=0.068  Sum_probs=31.9

Q ss_pred             eeeeeEEEEeCCHHH---HHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCC
Q 032542           16 VSVHHVGILCENLER---SLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   73 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~---a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   73 (138)
                      .+++|+++.|+|.+.   ..+...+ .|..+.....  .......+++= ++..++|+...+
T Consensus        76 ~~~~Hiaf~v~~~~~l~~~~~~l~~-~gv~~~~~~~--~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          76 NAITRIGLLVPSEDSLHYWKERFEK-FDVKHSEMTT--YANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHH-TTCEECCSEE--ETTEEEEEEECTTCCEEEEEECTT
T ss_pred             CceeEEEEecCCchhHHHHhhhhhc-cceeeeCccc--cCCeEEEEEECCCCCEEEEEEeCC
Confidence            469999999999554   4444444 6666543222  12223344433 456899876544

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=90.59  E-value=0.16  Score=30.95  Aligned_cols=30  Identities=20%  Similarity=0.491  Sum_probs=25.9

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeecc
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEA   46 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~   46 (138)
                      .|++||++.|+|+.+|.+..++ -|++....
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~-~Gv~fL~~  112 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKK-IGMRFMTA  112 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHH-TTCCBCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHh-cCCccccC
Confidence            4799999999999999999997 68776653

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.10  E-value=0.96  Score=26.01  Aligned_cols=57  Identities=14%  Similarity=0.186  Sum_probs=41.3

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeecCC
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN   73 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~   73 (138)
                      ..++.|+++.+.|+++..+.+++ .|.++..... .......+|++= ++..++|++..+
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~p~-~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKKPD-DGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEECTT-SSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeCCc-cCCceEEEEEECCCCCEEEEEeCCC
Confidence            35899999999999999999997 7998887533 222223455543 467888887653

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=89.82  E-value=0.62  Score=25.70  Aligned_cols=30  Identities=27%  Similarity=0.243  Sum_probs=26.0

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+++.|+|+++..+-+++ .|.+....
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~   33 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGS   33 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceecc
Confidence            3578999999999999999998 59988654

>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase BC2806
species: Bacillus cereus [TaxId: 1396]

Probab=89.56  E-value=0.18  Score=28.32  Aligned_cols=34  Identities=12%  Similarity=0.129  Sum_probs=24.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK   51 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~   51 (138)
                      .+...+.+.+.+. .|.+||++ +||+.....+...
T Consensus        95 ~g~~~i~l~~~n~-~A~~fY~k-~GF~~~g~~~~~~  128 (140)
T d1y9wa1          95 KGCRLILLDSFSF-QAPEFYKK-HGYREYGVVEDHP  128 (140)
T ss_dssp             TTCCEEEEEEEGG-GCHHHHHH-TTCEEEEEESSCS
T ss_pred             ccceEEEEeechh-hHHHHHHh-CCCEEEEEECCCC
Confidence            3456677777764 58999998 8999987655433

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.35  E-value=0.57  Score=27.40  Aligned_cols=28  Identities=21%  Similarity=0.218  Sum_probs=24.5

Q ss_pred             CccEEEEEECCHHHHHHHHHHCCCeEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDKAGISYTL  113 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~~g~~~~~  113 (138)
                      ++.|+++.|.|+++..+-.+..|.+++.
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~d   32 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVSE   32 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEEE
Confidence            4789999999999999888889998764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=88.67  E-value=0.21  Score=30.87  Aligned_cols=23  Identities=22%  Similarity=0.340  Sum_probs=20.6

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHh
Q 032542           16 VSVHHVGILCENLERSLEFYQNI   38 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~   38 (138)
                      .|++||++.|+|+.++.+.+++.
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~ar  112 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQAR  112 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHTS
T ss_pred             CCceeEEEEeCCHHHHHHHHHhc
Confidence            58999999999999999988763

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=88.47  E-value=0.73  Score=25.57  Aligned_cols=29  Identities=21%  Similarity=0.130  Sum_probs=25.0

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      ++.|+.+.|+|+++..+-+++ .|..+...
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~   36 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDR   36 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEe
Confidence            367999999999999999987 79887654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=87.95  E-value=0.31  Score=29.50  Aligned_cols=32  Identities=9%  Similarity=0.291  Sum_probs=27.0

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeeccCC
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINEARP   48 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~   48 (138)
                      .|++||++.|+|+.++++-.++ -|++......
T Consensus        88 ~GiQHIAl~tdDI~~av~~L~~-~G~~fL~~p~  119 (199)
T d1t47a2          88 AGVQHIALNTGDIVETVRTMRA-AGVQFLDTPD  119 (199)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-TTCCBCCCCG
T ss_pred             CcceEEEEEcCCHHHHHHHHHH-cCCCCCCCCh
Confidence            4899999999999999999987 7877766433

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.94  E-value=0.77  Score=25.69  Aligned_cols=30  Identities=20%  Similarity=0.153  Sum_probs=25.9

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+.+.|.|+++..+-.++ .|.+....
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~   45 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEE   45 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEee
Confidence            4578999999999999998886 79888764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=87.89  E-value=0.81  Score=24.80  Aligned_cols=28  Identities=18%  Similarity=0.264  Sum_probs=23.7

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTL  113 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  113 (138)
                      ++.|+.+.|.|+++..+-+.+ .|.++..
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~   32 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVY   32 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEE
Confidence            478999999999999888886 6888754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.82  E-value=0.29  Score=30.35  Aligned_cols=23  Identities=17%  Similarity=0.416  Sum_probs=20.7

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHh
Q 032542           16 VSVHHVGILCENLERSLEFYQNI   38 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~   38 (138)
                      .|++||++.|+|+.++++-.++.
T Consensus       103 ~GiQHIAf~tdDI~aav~~Lrar  125 (230)
T d1sqda2         103 AGLQHLALMSEDIFRTLREMRKR  125 (230)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHH
T ss_pred             CceeEEEEEeCCHHHHHHHHHHh
Confidence            38999999999999999999873

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.81  E-value=0.34  Score=29.60  Aligned_cols=29  Identities=17%  Similarity=0.418  Sum_probs=25.1

Q ss_pred             eeeeeEEEEeCCHHHHHHHHHHhhCCeeec
Q 032542           16 VSVHHVGILCENLERSLEFYQNILGLEINE   45 (138)
Q Consensus        16 ~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~   45 (138)
                      .|++||++.|+|+.++++..++ -|++...
T Consensus       106 ~GiQHIAf~t~DI~~av~~L~~-~Gv~fL~  134 (210)
T d1sqia2         106 AGVQHIALRTEDIITTIRHLRE-RGMEFLA  134 (210)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-HTCCBCC
T ss_pred             CCeeEEEEEcCCHHHHHHHHHH-cCCCCCC
Confidence            3799999999999999999998 6776654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=86.52  E-value=1.3  Score=23.49  Aligned_cols=52  Identities=8%  Similarity=0.147  Sum_probs=33.5

Q ss_pred             eeEEEEeCCHHHHHHHHHHhhCCeeeccCCCCCCCeeEEEEEe-CCeEEEEeec
Q 032542           19 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL   71 (138)
Q Consensus        19 ~hi~l~v~d~~~a~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   71 (138)
                      .++.+.|.|++++.+-+.+ .|.++.........+.+..+++- ++..+++++.
T Consensus        62 ~~~~f~v~D~d~~~~~l~~-~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          62 IIIHIEVEDVDQNYKRLNE-LGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             EEEEEECSCHHHHHHHHHH-HTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             eEEEEEECCHHHHHHHHHh-hccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            3688899999999999988 89877654322223334444433 3456666653

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=86.12  E-value=0.66  Score=22.96  Aligned_cols=27  Identities=11%  Similarity=0.158  Sum_probs=23.5

Q ss_pred             cEEEEEECCHHHHHHHHHHCCCeEEec
Q 032542           88 RHTCIAIRDVSKLKMILDKAGISYTLS  114 (138)
Q Consensus        88 ~hi~~~v~d~~~~~~~l~~~g~~~~~~  114 (138)
                      ..+.|.|+|.+.+.+.|+++|+++..+
T Consensus        39 ~~~vl~vdd~~~a~~~L~~~G~~vl~~   65 (71)
T d2f06a1          39 ANVVIRPSNMDKCIEVLKEKKVDLLAA   65 (71)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEEECH
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEEEch
Confidence            358899999999999999999988653

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=85.94  E-value=0.62  Score=26.63  Aligned_cols=30  Identities=13%  Similarity=0.093  Sum_probs=26.0

Q ss_pred             CCCccEEEEEECCHHHHHHHHHH-CCCeEEe
Q 032542           84 GGRDRHTCIAIRDVSKLKMILDK-AGISYTL  113 (138)
Q Consensus        84 ~~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  113 (138)
                      ..|+.|+++.|.|+++..+-+++ .|.+++.
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~   38 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSD   38 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeee
Confidence            46789999999999999999887 7988753

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=83.89  E-value=2.9  Score=24.86  Aligned_cols=78  Identities=14%  Similarity=0.089  Sum_probs=48.6

Q ss_pred             eeeeeeEEEEeCCHHHHHHHHHHhhCCeeecc-CCCCCCCeeEE----EEEeCCeEEEEeecCCCCCCCCCCCCCCCccE
Q 032542           15 VVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGA----WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH   89 (138)
Q Consensus        15 ~~~l~hi~l~v~d~~~a~~fy~~~lg~~~~~~-~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~h   89 (138)
                      --.++|++++|++.+.|.+|-+..+.+-..-. ..-++......    =+.+++-.+..+..+-+..  +.++ ..|+-|
T Consensus        41 ~~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~--k~Yp-~eGWEH  117 (190)
T d1k4na_          41 PLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGE--KRYP-HEGWEH  117 (190)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCS--SCCS-SCEEEE
T ss_pred             hccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCC--CCCC-CCCceE
Confidence            34589999999999999999999887743321 11112111111    1344666777777665432  2222 256789


Q ss_pred             EEEEEC
Q 032542           90 TCIAIR   95 (138)
Q Consensus        90 i~~~v~   95 (138)
                      +-+.++
T Consensus       118 IElVlp  123 (190)
T d1k4na_         118 IEIVLP  123 (190)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999987

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.66  E-value=1.3  Score=24.07  Aligned_cols=29  Identities=14%  Similarity=0.171  Sum_probs=24.8

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      ++.|+++.|.|++++.+-+++ .|.++...
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~   33 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEAR   33 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEe
Confidence            578999999999999999988 68877654

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=83.44  E-value=2.5  Score=23.92  Aligned_cols=28  Identities=14%  Similarity=0.108  Sum_probs=24.2

Q ss_pred             CccEEEEEECCHHHHHHHHHH-CCCeEEe
Q 032542           86 RDRHTCIAIRDVSKLKMILDK-AGISYTL  113 (138)
Q Consensus        86 ~~~hi~~~v~d~~~~~~~l~~-~g~~~~~  113 (138)
                      ++.|+++.|.|+++..+-..+ .|.++..
T Consensus         5 rldHv~l~v~Dle~s~~FY~~vLG~~~~~   33 (162)
T d1mpya2           5 RFDHALMYGDELPATYDLFTKVLGFYLAE   33 (162)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             cccEEEEECCCHHHHHHHHHHccCCEEEE
Confidence            478999999999999999987 7987754

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=82.54  E-value=1.3  Score=24.34  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=25.7

Q ss_pred             CCccEEEEEECCHHHHHHHHHH-CCCeEEec
Q 032542           85 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS  114 (138)
Q Consensus        85 ~~~~hi~~~v~d~~~~~~~l~~-~g~~~~~~  114 (138)
                      .++.|+++.|.|++++.+-.++ .|.++...
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~   33 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHAR   33 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEE
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEE
Confidence            4578999999999999999987 79887644