Your job contains 1 sequence.
>032554
MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF
FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD
EKAKELESLSSEPGSVDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032554
(138 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118066 - symbol:AT4G12060 "AT4G12060" species... 471 9.1e-45 1
TAIR|locus:2138048 - symbol:AT4G25370 "AT4G25370" species... 446 4.0e-42 1
UNIPROTKB|Q3A9N1 - symbol:CHY_2348 "Negative regulator of... 167 2.6e-11 1
TIGR_CMR|CHY_2348 - symbol:CHY_2348 "negative regulator o... 167 2.6e-11 1
TAIR|locus:2157383 - symbol:CLPC1 "CLPC homologue 1" spec... 165 5.1e-11 1
TAIR|locus:2099433 - symbol:HSP93-III species:3702 "Arabi... 163 8.6e-11 1
UNIPROTKB|Q724I0 - symbol:LMOf2365_0244 "ClpC ATPase" spe... 158 2.4e-10 1
UNIPROTKB|P0A522 - symbol:clpC "Probable ATP-dependent Cl... 151 1.4e-09 1
UNIPROTKB|Q81VV9 - symbol:BAS0081 "Negative regulator of ... 144 7.5e-09 1
TIGR_CMR|BA_0080 - symbol:BA_0080 "negative regulator of ... 144 7.5e-09 1
TIGR_CMR|DET_0057 - symbol:DET_0057 "ATP-dependent Clp pr... 131 1.9e-07 1
TAIR|locus:2085592 - symbol:AT3G45450 species:3702 "Arabi... 111 7.3e-06 1
>TAIR|locus:2118066 [details] [associations]
symbol:AT4G12060 "AT4G12060" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0019538 "protein metabolic
process" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009532 "plastid stroma" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0043424 "protein
histidine kinase binding" evidence=IPI] [GO:0006569 "tryptophan
catabolic process" evidence=RCA] [GO:0009684 "indoleacetic acid
biosynthetic process" evidence=RCA] InterPro:IPR004176 Pfam:PF02861
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941
GO:GO:0019538 EMBL:AL049638 EMBL:AL161533 EMBL:AK119030
EMBL:AY087178 IPI:IPI00530058 PIR:T06613 RefSeq:NP_567386.1
UniGene:At.43268 ProteinModelPortal:Q8GW78 SMR:Q8GW78 IntAct:Q8GW78
STRING:Q8GW78 PaxDb:Q8GW78 PRIDE:Q8GW78 ProMEX:Q8GW78
EnsemblPlants:AT4G12060.1 GeneID:826814 KEGG:ath:AT4G12060
GeneFarm:2777 TAIR:At4g12060 eggNOG:COG0542 HOGENOM:HOG000006326
OMA:WSDKESA PhylomeDB:Q8GW78 ProtClustDB:CLSN2689402
Genevestigator:Q8GW78 Gene3D:1.10.1780.10 InterPro:IPR023150
Uniprot:Q8GW78
Length = 241
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 88/138 (63%), Positives = 109/138 (78%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS +KFL AN + L+KVR+E+VK++GK D +F
Sbjct: 104 MGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYF 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTEDAQR +D A+D LK+G GEV + +LLGIWSE +SPGHKILA LGF+D
Sbjct: 164 FSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTD 223
Query: 121 EKAKXXXXXXXXPGSVDD 138
EK+K G +D+
Sbjct: 224 EKSKELESFASESGFLDE 241
>TAIR|locus:2138048 [details] [associations]
symbol:AT4G25370 "AT4G25370" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0019538 "protein metabolic
process" evidence=IEA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR004176 Pfam:PF02861 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941 GO:GO:0009579
GO:GO:0019538 eggNOG:COG0542 HOGENOM:HOG000006326
ProtClustDB:CLSN2689402 Gene3D:1.10.1780.10 InterPro:IPR023150
EMBL:AY035135 EMBL:AY059070 EMBL:AY086824 IPI:IPI00526265
RefSeq:NP_567718.1 UniGene:At.21146 ProteinModelPortal:Q93WL3
SMR:Q93WL3 IntAct:Q93WL3 STRING:Q93WL3 PaxDb:Q93WL3 PRIDE:Q93WL3
EnsemblPlants:AT4G25370.1 GeneID:828640 KEGG:ath:AT4G25370
TAIR:At4g25370 InParanoid:Q93WL3 OMA:GTEAILM PhylomeDB:Q93WL3
Genevestigator:Q93WL3 Uniprot:Q93WL3
Length = 238
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 85/124 (68%), Positives = 102/124 (82%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P+TGTEAILMGILVEGTS AKFL NGVTLFKVRDE++ ++GK D +F
Sbjct: 96 MGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYF 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ I WA+D K KS GE+T + LLLG+WS+ DS G +IL LGF++
Sbjct: 156 FSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNE 215
Query: 121 EKAK 124
+KAK
Sbjct: 216 DKAK 219
>UNIPROTKB|Q3A9N1 [details] [associations]
symbol:CHY_2348 "Negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 167 (63.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/136 (32%), Positives = 73/136 (53%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EARK+ +P TE +L+GI+ EG S+AAK L G+ KVR++ +++VG G+
Sbjct: 15 MAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKILELVGPGEGPM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +VD + G++ V LLLG+ E + ++L +LG
Sbjct: 75 --PAEIAFTPRAKRVLELSVDEAARFGHN-YVGTEHLLLGLIREGEGVAARVLVSLGADL 131
Query: 121 EKAKXXXXXXXXPGSV 136
E+ + G +
Sbjct: 132 ERVRAEITQVLSGGPI 147
>TIGR_CMR|CHY_2348 [details] [associations]
symbol:CHY_2348 "negative regulator of genetic competence
clpC/mecB" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0009294
"DNA mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111
GO:GO:0009294 GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:QTIHYTP RefSeq:YP_361153.1
ProteinModelPortal:Q3A9N1 SMR:Q3A9N1 STRING:Q3A9N1 GeneID:3726501
KEGG:chy:CHY_2348 PATRIC:21277763
BioCyc:CHYD246194:GJCN-2347-MONOMER Uniprot:Q3A9N1
Length = 811
Score = 167 (63.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/136 (32%), Positives = 73/136 (53%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EARK+ +P TE +L+GI+ EG S+AAK L G+ KVR++ +++VG G+
Sbjct: 15 MAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKILELVGPGEGPM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +VD + G++ V LLLG+ E + ++L +LG
Sbjct: 75 --PAEIAFTPRAKRVLELSVDEAARFGHN-YVGTEHLLLGLIREGEGVAARVLVSLGADL 131
Query: 121 EKAKXXXXXXXXPGSV 136
E+ + G +
Sbjct: 132 ERVRAEITQVLSGGPI 147
>TAIR|locus:2157383 [details] [associations]
symbol:CLPC1 "CLPC homologue 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009532
"plastid stroma" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0031897 "Tic complex" evidence=TAS] [GO:0045037 "protein import
into chloroplast stroma" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IMP] [GO:0045036 "protein targeting to chloroplast"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IDA] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 EMBL:CP002688 GO:GO:0005618 GO:GO:0009570
GO:GO:0009658 GO:GO:0010380 GO:GO:0009535 GO:GO:0019538
EMBL:AB017063 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 HSSP:P03815 EMBL:AF022909 EMBL:AY102125 EMBL:AK227173
IPI:IPI00535976 PIR:T52292 RefSeq:NP_568746.1 UniGene:At.24774
UniGene:At.74761 UniGene:At.74764 UniGene:At.75059
ProteinModelPortal:Q9FI56 SMR:Q9FI56 IntAct:Q9FI56 STRING:Q9FI56
PRIDE:Q9FI56 EnsemblPlants:AT5G50920.1 GeneID:835165
KEGG:ath:AT5G50920 GeneFarm:797 TAIR:At5g50920 InParanoid:Q9FI56
KO:K03696 OMA:FHQLTRD PhylomeDB:Q9FI56 ProtClustDB:CLSN2689981
Genevestigator:Q9FI56 GO:GO:0031897 GO:GO:0045037 Uniprot:Q9FI56
Length = 929
Score = 165 (63.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 42/117 (35%), Positives = 69/117 (58%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 108 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 167
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ E P T A+RV++ +++ + G++ + + LLLG+ E + ++L LG
Sbjct: 168 -AVEIP-FTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLG 221
>TAIR|locus:2099433 [details] [associations]
symbol:HSP93-III species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009532 "plastid stroma"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=ISS] [GO:0045037 "protein
import into chloroplast stroma" evidence=ISS] [GO:0016020
"membrane" evidence=IDA] [GO:0034214 "protein hexamerization"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GO:GO:0042803 GO:GO:0016020
GO:GO:0009941 GO:GO:0016887 GO:GO:0009658 GO:GO:0019538
EMBL:AL132963 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
HSSP:P03815 KO:K03696 ProtClustDB:CLSN2689981 GO:GO:0045037
EMBL:AB022324 EMBL:AY056787 IPI:IPI00535199 PIR:T49283 PIR:T52456
RefSeq:NP_566912.2 UniGene:At.23421 ProteinModelPortal:Q9SXJ7
SMR:Q9SXJ7 IntAct:Q9SXJ7 STRING:Q9SXJ7 PRIDE:Q9SXJ7
EnsemblPlants:AT3G48870.1 GeneID:824048 KEGG:ath:AT3G48870
GeneFarm:2764 TAIR:At3g48870 InParanoid:Q9SXJ7 OMA:QTIHYTP
PhylomeDB:Q9SXJ7 Genevestigator:Q9SXJ7 GO:GO:0034214 Uniprot:Q9SXJ7
Length = 952
Score = 163 (62.4 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 42/117 (35%), Positives = 69/117 (58%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 128 LSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFV 187
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ E P T A+RV++ +++ + G++ + + LLLG+ E + ++L LG
Sbjct: 188 -AVEIP-FTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLENLG 241
>UNIPROTKB|Q724I0 [details] [associations]
symbol:LMOf2365_0244 "ClpC ATPase" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0006950 "response to stress"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IMP]
InterPro:IPR001270 InterPro:IPR001943 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004176 InterPro:IPR013093
InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
PROSITE:PS50151 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0016887 EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0019538
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 OMA:QTIHYTP RefSeq:YP_012854.1 ProteinModelPortal:Q724I0
SMR:Q724I0 STRING:Q724I0 GeneID:2799882 KEGG:lmf:LMOf2365_0244
PATRIC:20321701 ProtClustDB:CLSK2753149 Uniprot:Q724I0
Length = 820
Score = 158 (60.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/124 (32%), Positives = 71/124 (57%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+
Sbjct: 16 LSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ ++ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S
Sbjct: 76 TTIQYTPR---AKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISL 131
Query: 121 EKAK 124
KA+
Sbjct: 132 NKAR 135
Score = 115 (45.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>UNIPROTKB|P0A522 [details] [associations]
symbol:clpC "Probable ATP-dependent Clp protease
ATP-binding subunit" species:1773 "Mycobacterium tuberculosis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006457 "protein folding" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0044183 "protein binding involved in protein
folding" evidence=IMP] InterPro:IPR001270 InterPro:IPR001943
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02151
Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870
PROSITE:PS50151 SMART:SM00382 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0016887 GO:GO:0044183 eggNOG:COG0542 Gene3D:1.10.1780.10
InterPro:IPR023150 HOGENOM:HOG000218210 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 KO:K03696 OMA:FHQLTRD PIR:E70954
RefSeq:NP_338246.1 RefSeq:YP_006517086.1 RefSeq:YP_177995.1
ProteinModelPortal:P0A522 SMR:P0A522 IntAct:P0A522 PRIDE:P0A522
EnsemblBacteria:EBMYCT00000002289 EnsemblBacteria:EBMYCT00000069514
GeneID:13317205 GeneID:885104 GeneID:922793 KEGG:mtc:MT3703
KEGG:mtu:Rv3596c KEGG:mtv:RVBD_3596c PATRIC:18129893
TubercuList:Rv3596c ProtClustDB:CLSK2391256 Uniprot:P0A522
Length = 848
Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 39/118 (33%), Positives = 68/118 (57%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQ-- 72
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 73 -APSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
>UNIPROTKB|Q81VV9 [details] [associations]
symbol:BAS0081 "Negative regulator of genetic competence
ClpC/MecB" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 144 (55.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 41/124 (33%), Positives = 69/124 (55%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTPR---AKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAK 124
KA+
Sbjct: 132 NKAR 135
Score = 107 (42.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>TIGR_CMR|BA_0080 [details] [associations]
symbol:BA_0080 "negative regulator of genetic competence
ClpC/MecB" species:198094 "Bacillus anthracis str. Ames"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009294 "DNA
mediated transformation" evidence=ISS] InterPro:IPR001270
InterPro:IPR001943 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004176 InterPro:IPR013093 InterPro:IPR018368
Pfam:PF00004 Pfam:PF02151 Pfam:PF02861 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00870 PROSITE:PS00871 PROSITE:PS50151 SMART:SM00382
GO:GO:0005524 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017111 GO:GO:0019538
Gene3D:1.10.1780.10 InterPro:IPR023150 HOGENOM:HOG000218210
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P03815 KO:K03696
OMA:FHQLTRD RefSeq:NP_842649.1 RefSeq:YP_016685.1
RefSeq:YP_026367.1 ProteinModelPortal:Q81VV9 SMR:Q81VV9
IntAct:Q81VV9 DNASU:1085707 EnsemblBacteria:EBBACT00000012597
EnsemblBacteria:EBBACT00000016887 EnsemblBacteria:EBBACT00000023132
GeneID:1085707 GeneID:2814931 GeneID:2851161 KEGG:ban:BA_0080
KEGG:bar:GBAA_0080 KEGG:bat:BAS0081 ProtClustDB:CLSK872619
BioCyc:BANT260799:GJAJ-92-MONOMER BioCyc:BANT261594:GJ7F-94-MONOMER
Uniprot:Q81VV9
Length = 811
Score = 144 (55.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 41/124 (33%), Positives = 69/124 (55%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTPR---AKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAK 124
KA+
Sbjct: 132 NKAR 135
Score = 107 (42.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>TIGR_CMR|DET_0057 [details] [associations]
symbol:DET_0057 "ATP-dependent Clp protease, ATP-binding
subunit ClpC" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004176
InterPro:IPR013093 InterPro:IPR018368 Pfam:PF00004 Pfam:PF02861
Pfam:PF07724 PRINTS:PR00300 PROSITE:PS00870 PROSITE:PS00871
SMART:SM00382 GO:GO:0005524 GO:GO:0006508 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 GO:GO:0008233
eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218210 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03696 RefSeq:YP_180810.1 ProteinModelPortal:Q3ZAD9 SMR:Q3ZAD9
STRING:Q3ZAD9 GeneID:3229040 KEGG:det:DET0057 PATRIC:21607213
OMA:NYINTEH ProtClustDB:CLSK836766
BioCyc:DETH243164:GJNF-57-MONOMER Uniprot:Q3ZAD9
Length = 824
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 39/120 (32%), Positives = 61/120 (50%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE IL+G++ E +AA+ L V L KVR I+G+G+ S
Sbjct: 22 EAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMDVNLAKVRSAVEFILGRGEHPATS-- 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT A++VI+ +D G++ + LLLG+ E + +L + G + EK +
Sbjct: 80 ETGLTSRAKKVIELGIDEARNLGHN-YIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVR 138
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
+G EAR L H GTE +L+G+L EG AA L + GVT+ KVR E +I+ +G
Sbjct: 93 LGIDEARNLGHNYIGTEHLLLGLLREGEGAAAGVLESFGVTVEKVRTEVGRILNQG 148
>TAIR|locus:2085592 [details] [associations]
symbol:AT3G45450 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR003959
InterPro:IPR004176 Pfam:PF00004 Pfam:PF02861 GO:GO:0005524
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009941
GO:GO:0019538 eggNOG:COG0542 Gene3D:1.10.1780.10 InterPro:IPR023150
HOGENOM:HOG000218211 HSSP:P03815 KO:K03696 EMBL:AL138657
IPI:IPI00545666 PIR:T47485 RefSeq:NP_190131.1 UniGene:At.53754
ProteinModelPortal:Q9M1G2 SMR:Q9M1G2 PaxDb:Q9M1G2 PRIDE:Q9M1G2
EnsemblPlants:AT3G45450.1 GeneID:823685 KEGG:ath:AT3G45450
TAIR:At3g45450 InParanoid:Q9M1G2 OMA:EAIQITT PhylomeDB:Q9M1G2
ProtClustDB:CLSN2915415 Genevestigator:Q9M1G2 Uniprot:Q9M1G2
Length = 341
Score = 111 (44.1 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
+ + EAR+L + GTE IL+ ++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 15 LAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGF 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 138 130 0.00091 102 3 11 22 0.45 31
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 556 (59 KB)
Total size of DFA: 130 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.49u 0.11s 12.60t Elapsed: 00:00:02
Total cpu time: 12.50u 0.11s 12.61t Elapsed: 00:00:02
Start: Thu May 9 16:11:16 2013 End: Thu May 9 16:11:18 2013