BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032554
(138 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224058653|ref|XP_002299586.1| predicted protein [Populus trichocarpa]
gi|222846844|gb|EEE84391.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 121/137 (88%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK TTGTEA+L+GIL+EGTS+AAK+LWANG+T+FKVR+E++K++GK D ++
Sbjct: 23 MAELEARKLKFATTGTEALLLGILIEGTSVAAKYLWANGITVFKVREETIKVLGKADMYY 82
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
F PE PPLT+DAQ+V+DWA+DHKLKSG GEVT SDLLLGIWSE + PGHKILA LGF+D
Sbjct: 83 FPPERPPLTDDAQKVLDWALDHKLKSGYGGEVTTSDLLLGIWSEVECPGHKILAVLGFND 142
Query: 121 EKAKELESLSSEPGSVD 137
EKAKELE+ SS PG +D
Sbjct: 143 EKAKELEASSSGPGFID 159
>gi|224125070|ref|XP_002329884.1| predicted protein [Populus trichocarpa]
gi|222871121|gb|EEF08252.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 123/138 (89%), Gaps = 1/138 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK TTGTEA+L+GIL+EGTS+AAK+LWANG+T+FKVR+E++K++GK D ++
Sbjct: 23 MAELEARKLKFATTGTEALLLGILIEGTSVAAKYLWANGITVFKVREETIKVLGKADMYY 82
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS-GEVTASDLLLGIWSETDSPGHKILAALGFS 119
F PE PPLT+DAQ+V+DWA+DHKLKSG+S GEVT SDLLLGIWSE + PGHKILA LGF+
Sbjct: 83 FPPERPPLTDDAQKVLDWALDHKLKSGDSGGEVTTSDLLLGIWSEVECPGHKILAVLGFN 142
Query: 120 DEKAKELESLSSEPGSVD 137
DEKAKELE+ SS PG +D
Sbjct: 143 DEKAKELEASSSGPGFID 160
>gi|388506850|gb|AFK41491.1| unknown [Lotus japonicus]
Length = 230
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 121/138 (87%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+PTTGTEA+LMG+L+EGT++AAKFL ANGVTLFKVRDE+V+++GK D FF
Sbjct: 93 MGELEARKLKYPTTGTEALLMGVLIEGTNVAAKFLRANGVTLFKVRDETVRLLGKADMFF 152
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHP LT++AQ+ +DWAVD KL+S + GE+T ++LGIWSE DSPGHKIL+ LGF+D
Sbjct: 153 FSPEHPRLTDEAQKALDWAVDTKLQSVDGGEITTVHIILGIWSEVDSPGHKILSTLGFND 212
Query: 121 EKAKELESLSSEPGSVDD 138
EKAKELE+ S+PG DD
Sbjct: 213 EKAKELETSISKPGFKDD 230
>gi|356495627|ref|XP_003516676.1| PREDICTED: clp protease-related protein At4g12060, chloroplastic
[Glycine max]
Length = 220
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 116/138 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK+ TTGTEA+LMG+L+E T+L AKFL A+G+T+ KVRDE+VK++GK D FF
Sbjct: 83 MSELEARKLKYLTTGTEALLMGVLIESTNLTAKFLRAHGITILKVRDETVKLLGKADLFF 142
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLT++AQR +DWAVD K+K G+ GE+T S +LLGIWSE DSPGHKIL LGF+D
Sbjct: 143 FSPEHPPLTDEAQRALDWAVDQKIKYGDGGEITTSHILLGIWSEVDSPGHKILFTLGFND 202
Query: 121 EKAKELESLSSEPGSVDD 138
EKAKELE S+PG DD
Sbjct: 203 EKAKELEPSISKPGCTDD 220
>gi|147837826|emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
Length = 231
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 110/126 (87%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK+P TGTEA+LMGILVEGTSLAAKFL ANG+TLFKVR+E+V ++GK D +F
Sbjct: 94 MAELEARKLKYPNTGTEALLMGILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYF 153
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQR +DWAVD K+KSG GE+T S LLLGIW+E +S GHKILA LGF+D
Sbjct: 154 FSPEHPPLTEPAQRALDWAVDEKIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFND 213
Query: 121 EKAKEL 126
++AKEL
Sbjct: 214 DQAKEL 219
>gi|359490173|ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Vitis vinifera]
gi|296084123|emb|CBI24511.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 110/126 (87%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK+P TGTEA+LMGILVEGTSLAAKFL ANG+TLFKVR+E+V ++GK D +F
Sbjct: 94 MAELEARKLKYPNTGTEALLMGILVEGTSLAAKFLRANGITLFKVREETVNLLGKSDLYF 153
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQR +DWAVD K+KSG GE+T S LLLGIW+E +S GHKILA LGF+D
Sbjct: 154 FSPEHPPLTEPAQRALDWAVDEKIKSGEEGEITTSHLLLGIWAEEESAGHKILATLGFND 213
Query: 121 EKAKEL 126
++AKEL
Sbjct: 214 DQAKEL 219
>gi|18413740|ref|NP_567386.1| Double Clp-N motif protein [Arabidopsis thaliana]
gi|75150907|sp|Q8GW78.1|CLP41_ARATH RecName: Full=Clp protease-related protein At4g12060,
chloroplastic; Flags: Precursor
gi|26453060|dbj|BAC43606.1| unknown protein [Arabidopsis thaliana]
gi|332657692|gb|AEE83092.1| Double Clp-N motif protein [Arabidopsis thaliana]
Length = 241
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/138 (68%), Positives = 116/138 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS +KFL AN + L+KVR+E+VK++GK D +F
Sbjct: 104 MGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYF 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTEDAQR +D A+D LK+G GEV + +LLGIWSE +SPGHKILA LGF+D
Sbjct: 164 FSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTD 223
Query: 121 EKAKELESLSSEPGSVDD 138
EK+KELES +SE G +D+
Sbjct: 224 EKSKELESFASESGFLDE 241
>gi|21592785|gb|AAM64734.1| unknown [Arabidopsis thaliana]
Length = 241
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 116/138 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS +KFL AN + L+KVR+E+VK++GK D +F
Sbjct: 104 MGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYF 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLT+DAQR +D A+D LK+G GEV + +LLGIWSE +SPGHKILA LGF+D
Sbjct: 164 FSPEHPPLTQDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTD 223
Query: 121 EKAKELESLSSEPGSVDD 138
EK+KELES +SE G +D+
Sbjct: 224 EKSKELESFASESGFLDE 241
>gi|297813723|ref|XP_002874745.1| hypothetical protein ARALYDRAFT_911590 [Arabidopsis lyrata subsp.
lyrata]
gi|297320582|gb|EFH51004.1| hypothetical protein ARALYDRAFT_911590 [Arabidopsis lyrata subsp.
lyrata]
Length = 244
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 115/138 (83%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS +KFL AN +TL+KVR+E+VK++GK D +F
Sbjct: 107 MGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKITLYKVREETVKLLGKADMYF 166
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTEDAQR +D A+D K+G GEV + +LLGIWSE +SPGHKILA LGF+D
Sbjct: 167 FSPEHPPLTEDAQRALDSALDQNRKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTD 226
Query: 121 EKAKELESLSSEPGSVDD 138
EK+KELES +S G +D+
Sbjct: 227 EKSKELESFASTSGFLDE 244
>gi|255633360|gb|ACU17037.1| unknown [Glycine max]
Length = 149
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 113/135 (83%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK+ TTGTEA+LMG+L+E T+L AKFL A+G+T+ KVRDE+VK++GK D FF
Sbjct: 15 MSELEARKLKYLTTGTEALLMGVLIESTNLTAKFLRAHGITILKVRDETVKLLGKADLFF 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEH PLT++AQR +DWAVD K+K G+ GE+T S +LLGIWSE DSPGHKIL LGF+D
Sbjct: 75 FSPEHLPLTDEAQRALDWAVDQKIKYGDGGEITTSHILLGIWSEVDSPGHKILFTLGFND 134
Query: 121 EKAKELESLSSEPGS 135
EKAKELE S+PG
Sbjct: 135 EKAKELEPSISKPGC 149
>gi|359806749|ref|NP_001241043.1| uncharacterized protein LOC100786069 [Glycine max]
gi|255641314|gb|ACU20934.1| unknown [Glycine max]
Length = 252
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 108/126 (85%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGILVEGTS AAKFL ANG+TL KVR+E+V ++GK D FF
Sbjct: 119 MGELEARKLKYPNTGTEALLMGILVEGTSNAAKFLRANGITLLKVREETVGLLGKSDLFF 178
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ +DWA++ KLKSG GE+ A+ LLLGIWS+ +S G +ILA LGF+D
Sbjct: 179 FSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINATHLLLGIWSQKESAGQQILATLGFND 238
Query: 121 EKAKEL 126
EKAKEL
Sbjct: 239 EKAKEL 244
>gi|255539683|ref|XP_002510906.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223550021|gb|EEF51508.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 227
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 109/126 (86%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+GELEARKLK+P TGTEA+LMGIL+EGTS AAKFL ANG+T F+VR+E+V ++GK D ++
Sbjct: 89 LGELEARKLKYPNTGTEALLMGILIEGTSPAAKFLRANGITFFEVREETVNLLGKSDLYY 148
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQR +DWA+D KLKSG+ GE+T + +LLGIWSE +S GHK++ LGF+D
Sbjct: 149 FSPEHPPLTEQAQRALDWAIDEKLKSGDDGEITTTHILLGIWSEIESAGHKVMETLGFND 208
Query: 121 EKAKEL 126
EKAKEL
Sbjct: 209 EKAKEL 214
>gi|356530947|ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Glycine max]
Length = 252
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 108/126 (85%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGILVEGTS AAKF ANG+TLFKVR+E+V+++GK D +F
Sbjct: 111 MGELEARKLKYPNTGTEALLMGILVEGTSKAAKFSRANGITLFKVREETVELLGKSDLYF 170
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ +DWA++ KLKSG GE+ + LLLGIWS+ +S G +ILA LGF+D
Sbjct: 171 FSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILATLGFND 230
Query: 121 EKAKEL 126
EKAKEL
Sbjct: 231 EKAKEL 236
>gi|363808208|ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
gi|255639105|gb|ACU19852.1| unknown [Glycine max]
Length = 260
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 109/126 (86%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGILVEGTS AAKFL ANG+TLFKVR+E+V+++GK D +F
Sbjct: 119 MGELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGITLFKVREETVELLGKSDLYF 178
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ +DWA++ KLKSG GE++ + LLLGIWS+ +S G +IL LGF+D
Sbjct: 179 FSPEHPPLTEPAQKALDWAIEEKLKSGEGGEISVTHLLLGIWSQKESAGQQILDTLGFND 238
Query: 121 EKAKEL 126
EKAKEL
Sbjct: 239 EKAKEL 244
>gi|449460786|ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Cucumis sativus]
gi|449499662|ref|XP_004160878.1| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Cucumis sativus]
Length = 234
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS AAKFL ANG+TLFKVR+E+VK++GK D +F
Sbjct: 97 MGELEARKLKYPNTGTEALLMGILIEGTSTAAKFLRANGITLFKVREETVKLLGKADMYF 156
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
SPEHPPLTE AQ+ +DWAV KLKSG SGE+T LLLGIWSE +S G KILA LGF D
Sbjct: 157 CSPEHPPLTEPAQKALDWAVAEKLKSGQSGEITTGHLLLGIWSE-ESAGRKILATLGFDD 215
Query: 121 EKAKEL 126
EKAKE+
Sbjct: 216 EKAKEI 221
>gi|224134553|ref|XP_002321851.1| predicted protein [Populus trichocarpa]
gi|222868847|gb|EEF05978.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 109/126 (86%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+GELEARKLK+P TGTEA+LMGIL+EGTS AAKFL ANG+T FKVR+E V+++GK + +F
Sbjct: 22 LGELEARKLKYPNTGTEALLMGILIEGTSPAAKFLRANGITFFKVREEIVELLGKSEMYF 81
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQR +DWA++ KLKSG+SGE+T + +LLGIWSE +S GH IL LGF+D
Sbjct: 82 FSPEHPPLTEQAQRALDWAIEEKLKSGDSGEITTTHILLGIWSEKESAGHNILETLGFND 141
Query: 121 EKAKEL 126
+KAKE+
Sbjct: 142 DKAKEV 147
>gi|297803584|ref|XP_002869676.1| clp amino terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315512|gb|EFH45935.1| clp amino terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 239
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/132 (68%), Positives = 108/132 (81%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P+TGTEAILMGILVEGTS AKFL NGVTLFKVRDE++ ++GK D +F
Sbjct: 97 MGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDETISLLGKSDMYF 156
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ I WA+D K KSG GE+T + LLLGIWS+ DS G +IL LGF++
Sbjct: 157 FSPEHPPLTEPAQKAIAWAIDEKNKSGVDGELTTAYLLLGIWSQRDSAGRQILEKLGFNE 216
Query: 121 EKAKELESLSSE 132
+KAKE+E +E
Sbjct: 217 DKAKEVEKSVNE 228
>gi|4586111|emb|CAB40947.1| putative protein [Arabidopsis thaliana]
gi|7267907|emb|CAB78249.1| putative protein [Arabidopsis thaliana]
Length = 267
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 106/125 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEA+LMGIL+EGTS +KFL AN + L+KVR+E+VK++GK D +F
Sbjct: 104 MGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVREETVKLLGKADMYF 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTEDAQR +D A+D LK+G GEV + +LLGIWSE +SPGHKILA LGF+D
Sbjct: 164 FSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVESPGHKILATLGFTD 223
Query: 121 EKAKE 125
EK+K+
Sbjct: 224 EKSKD 228
>gi|224122572|ref|XP_002318870.1| predicted protein [Populus trichocarpa]
gi|222859543|gb|EEE97090.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 108/126 (85%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+GELEARKLK+P TGT+A+LMGIL+EGTS AAKFL ANG+T FKVR+E+V ++GK + +F
Sbjct: 20 LGELEARKLKYPNTGTDALLMGILIEGTSPAAKFLRANGITFFKVREETVNLLGKSEMYF 79
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQR +DWAV+ KLKSG+SGE+T + +LLG WSE +S G KIL LGF+D
Sbjct: 80 FSPEHPPLTEQAQRALDWAVEEKLKSGDSGEITTTHILLGTWSEKESAGCKILETLGFND 139
Query: 121 EKAKEL 126
+KAKE+
Sbjct: 140 DKAKEV 145
>gi|115451893|ref|NP_001049547.1| Os03g0247000 [Oryza sativa Japonica Group]
gi|108707157|gb|ABF94952.1| Clp amino terminal domain containing protein, expressed [Oryza
sativa Japonica Group]
gi|113548018|dbj|BAF11461.1| Os03g0247000 [Oryza sativa Japonica Group]
gi|215704768|dbj|BAG94796.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192433|gb|EEC74860.1| hypothetical protein OsI_10740 [Oryza sativa Indica Group]
Length = 232
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/132 (64%), Positives = 106/132 (80%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG+TL KVR+E+ ++GK + F+
Sbjct: 94 MAELEARKMRYPTTGTEGLLMGILVEGTSDAAKLLRANGITLLKVREEAANVLGKSEMFY 153
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWA++ KLKSG GEVTA+ LLLGIWS+ +S GHK+LA+LGF D
Sbjct: 154 FSPMHPPLTEAAQRALDWAINEKLKSGEDGEVTANHLLLGIWSDKESAGHKVLASLGFDD 213
Query: 121 EKAKELESLSSE 132
E+A L + E
Sbjct: 214 ERANSLAKTAGE 225
>gi|242036327|ref|XP_002465558.1| hypothetical protein SORBIDRAFT_01g041120 [Sorghum bicolor]
gi|241919412|gb|EER92556.1| hypothetical protein SORBIDRAFT_01g041120 [Sorghum bicolor]
Length = 230
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 105/132 (79%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG TL KVRDE+ ++GK + F+
Sbjct: 92 MAELEARKMRYPTTGTEGLLMGILVEGTSGAAKLLRANGTTLLKVRDEAANVLGKSEMFY 151
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEVTA+ LLLGIWS+ +S GHKIL +LGF D
Sbjct: 152 FSPMHPPLTEAAQRALDWAVNEKLKSGEDGEVTANHLLLGIWSDKESAGHKILESLGFDD 211
Query: 121 EKAKELESLSSE 132
EKA L ++E
Sbjct: 212 EKASLLAKTANE 223
>gi|116792490|gb|ABK26389.1| unknown [Picea sitchensis]
Length = 255
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M E EARK+++PTTGTEA+LMGIL EGTS A+KFLWANGVTLFKVRDESVK+VGK + F
Sbjct: 117 MAECEARKMRYPTTGTEALLMGILTEGTSYASKFLWANGVTLFKVRDESVKLVGKSNPLF 176
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
SPE PPLTE AQ+ +DWAVD K K G SGEVT + +LL IW+E S G +ILA LG D
Sbjct: 177 TSPERPPLTESAQKALDWAVDEKTKLGESGEVTTTHMLLAIWAEKGSTGQQILANLGIDD 236
Query: 121 EKAKEL-ESLSSE 132
+KAKEL ES+ E
Sbjct: 237 KKAKELAESIKEE 249
>gi|5123926|emb|CAB45514.1| putative protein [Arabidopsis thaliana]
gi|7269388|emb|CAB81348.1| putative protein [Arabidopsis thaliana]
Length = 234
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 105/127 (82%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P+TGTEAILMGILVEGTS AKFL NGVTLFKVRDE++ ++GK D +F
Sbjct: 96 MGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYF 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ I WA+D K KS GE+T + LLLG+WS+ DS G +IL LGF++
Sbjct: 156 FSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNE 215
Query: 121 EKAKELE 127
+KAKE+E
Sbjct: 216 DKAKEVE 222
>gi|18416540|ref|NP_567718.1| Double Clp-N motif protein [Arabidopsis thaliana]
gi|14334924|gb|AAK59640.1| unknown protein [Arabidopsis thaliana]
gi|16323364|gb|AAL15176.1| unknown protein [Arabidopsis thaliana]
gi|21555497|gb|AAM63872.1| unknown [Arabidopsis thaliana]
gi|195604812|gb|ACG24236.1| ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
gi|332659648|gb|AEE85048.1| Double Clp-N motif protein [Arabidopsis thaliana]
Length = 238
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 105/127 (82%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P+TGTEAILMGILVEGTS AKFL NGVTLFKVRDE++ ++GK D +F
Sbjct: 96 MGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYF 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ I WA+D K KS GE+T + LLLG+WS+ DS G +IL LGF++
Sbjct: 156 FSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNE 215
Query: 121 EKAKELE 127
+KAKE+E
Sbjct: 216 DKAKEVE 222
>gi|222624562|gb|EEE58694.1| hypothetical protein OsJ_10129 [Oryza sativa Japonica Group]
Length = 251
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/126 (66%), Positives = 104/126 (82%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG+TL KVR+E+ ++GK + F+
Sbjct: 83 MAELEARKMRYPTTGTEGLLMGILVEGTSDAAKLLRANGITLLKVREEAANVLGKSEMFY 142
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWA++ KLKSG GEVTA+ LLLGIWS+ +S GHK+LA+LGF D
Sbjct: 143 FSPMHPPLTEAAQRALDWAINEKLKSGEDGEVTANHLLLGIWSDKESAGHKVLASLGFDD 202
Query: 121 EKAKEL 126
E+A L
Sbjct: 203 ERANSL 208
>gi|413956344|gb|AFW88993.1| hypothetical protein ZEAMMB73_151652 [Zea mays]
gi|413956345|gb|AFW88994.1| hypothetical protein ZEAMMB73_151652 [Zea mays]
Length = 150
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 106/136 (77%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG TL KVR+E+ ++GK + F+
Sbjct: 1 MAELEARKMRYPTTGTEGLLMGILVEGTSGAAKLLRANGTTLLKVREEAANVLGKSEMFY 60
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEVTA+ LLLGIWS+ +S GHKIL +LGF D
Sbjct: 61 FSPMHPPLTEAAQRALDWAVNEKLKSGEDGEVTANHLLLGIWSDKESAGHKILYSLGFDD 120
Query: 121 EKAKELESLSSEPGSV 136
EKA L + E ++
Sbjct: 121 EKASLLAKTAGEEAAM 136
>gi|357113150|ref|XP_003558367.1| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Brachypodium distachyon]
Length = 231
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 103/126 (81%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG+TL VRD + +++GK + F+
Sbjct: 93 MAELEARKMRYPTTGTEGLLMGILVEGTSDAAKLLRANGITLLTVRDAAAEVLGKSEMFY 152
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEVTA+ LLLGIWS+ +S GHK+LA+LGF D
Sbjct: 153 FSPMHPPLTESAQRALDWAVNEKLKSGEDGEVTANHLLLGIWSDKESAGHKVLASLGFDD 212
Query: 121 EKAKEL 126
EKA L
Sbjct: 213 EKAALL 218
>gi|255537133|ref|XP_002509633.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223549532|gb|EEF51020.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 223
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 104/137 (75%), Gaps = 17/137 (12%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLKH TGTE++L+G+L+EGT+LAAK+LW NG+TL KVR+E VK++GK D +F
Sbjct: 103 MSELEARKLKHANTGTESLLLGVLIEGTNLAAKYLWTNGITLLKVREEIVKLLGKADMYF 162
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
F PE PPLTE AQ+ +DWAVDHKLK SE DSPGHK+LA LGF+D
Sbjct: 163 FPPEQPPLTESAQKALDWAVDHKLK-----------------SEVDSPGHKVLATLGFND 205
Query: 121 EKAKELESLSSEPGSVD 137
EKAKELESLSS PG VD
Sbjct: 206 EKAKELESLSSGPGFVD 222
>gi|388498444|gb|AFK37288.1| unknown [Medicago truncatula]
Length = 246
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 108/128 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M +EARKLK TTGTEA++MGIL+EGT+LA+KFL ANG+TLFKVRDE VKI+G+ D F
Sbjct: 96 MSAIEARKLKFTTTGTEALIMGILIEGTNLASKFLRANGITLFKVRDEIVKILGEVDPFT 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+PE PP+T+DAQR +DWAVD KLKS + GEVT + ++LGIWS+ DSPGHKIL+ LG +D
Sbjct: 156 ETPERPPMTDDAQRALDWAVDRKLKSVDGGEVTTAHIILGIWSDVDSPGHKILSKLGIND 215
Query: 121 EKAKELES 128
EKAKELE+
Sbjct: 216 EKAKELEA 223
>gi|357481863|ref|XP_003611217.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355512552|gb|AES94175.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 233
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 108/128 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M +EARKLK TTGTEA++MGIL+EGT+LA+KFL ANG+TLFKVRDE VKI+G+ D F
Sbjct: 96 MSAIEARKLKFTTTGTEALIMGILIEGTNLASKFLRANGITLFKVRDEIVKILGEVDPFT 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+PE PP+T+DAQR +DWAVD KLKS + GEVT + ++LGIWS+ DSPGHKIL+ LG +D
Sbjct: 156 ETPERPPMTDDAQRALDWAVDRKLKSVDGGEVTTAHIILGIWSDVDSPGHKILSKLGIND 215
Query: 121 EKAKELES 128
EKAKELE+
Sbjct: 216 EKAKELEA 223
>gi|226507671|ref|NP_001142341.1| uncharacterized protein LOC100274511 [Zea mays]
gi|194708290|gb|ACF88229.1| unknown [Zea mays]
gi|195628054|gb|ACG35857.1| ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
gi|413956343|gb|AFW88992.1| ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
Length = 239
Score = 182 bits (461), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 106/137 (77%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG TL KVR+E+ ++GK + F+
Sbjct: 90 MAELEARKMRYPTTGTEGLLMGILVEGTSGAAKLLRANGTTLLKVREEAANVLGKSEMFY 149
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEVTA+ LLLGIWS+ +S GHKIL +LGF D
Sbjct: 150 FSPMHPPLTEAAQRALDWAVNEKLKSGEDGEVTANHLLLGIWSDKESAGHKILYSLGFDD 209
Query: 121 EKAKELESLSSEPGSVD 137
EKA L + E ++
Sbjct: 210 EKASLLAKTAGEEAAMS 226
>gi|226507418|ref|NP_001148254.1| ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
gi|195616970|gb|ACG30315.1| ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
gi|238015076|gb|ACR38573.1| unknown [Zea mays]
gi|414865817|tpg|DAA44374.1| TPA: ATP-dependent Clp protease ATP-binding subunit clpA [Zea mays]
Length = 230
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 105/137 (76%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK L ANG+TL KVR+E+ ++GK + F+
Sbjct: 92 MAELEARKMRYPTTGTEGLLMGILVEGTSGAAKLLRANGITLLKVREEAANVLGKSEMFY 151
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEV A+ LLLGIWS+ +S GHKIL +LGF D
Sbjct: 152 FSPMHPPLTEAAQRALDWAVNEKLKSGEDGEVNANHLLLGIWSDDESAGHKILYSLGFDD 211
Query: 121 EKAKELESLSSEPGSVD 137
KA L + E ++
Sbjct: 212 VKASLLAKTADEEAAMS 228
>gi|326533978|dbj|BAJ93762.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 102/132 (77%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+++PTTGTE +LMGILVEGTS AAK + ANG+TL VRD + I+GK + F+
Sbjct: 93 MAELEARKMRYPTTGTEGLLMGILVEGTSDAAKLMRANGITLLTVRDAAATILGKSEMFY 152
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSP HPPLTE AQR +DWAV+ KLKSG GEVTA+ L L IWS+ +S GHK+LA+LGF D
Sbjct: 153 FSPMHPPLTESAQRALDWAVNEKLKSGEDGEVTANHLFLAIWSDKESAGHKVLASLGFDD 212
Query: 121 EKAKELESLSSE 132
+KA L + E
Sbjct: 213 QKASLLAKTAGE 224
>gi|116785940|gb|ABK23916.1| unknown [Picea sitchensis]
gi|224285995|gb|ACN40709.1| unknown [Picea sitchensis]
Length = 255
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+K+PTTGTEA+LMGIL EGTS A+K+L ANGVTLFKVRDE+VK++GK +
Sbjct: 117 MAELEARKMKYPTTGTEALLMGILAEGTSPASKYLRANGVTLFKVRDEAVKLLGKSYPLY 176
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
SPEHP LTE AQ+ +DWAVD K+KSG SGEVT + +LLGIW++ G +ILA LGF D
Sbjct: 177 TSPEHPTLTEPAQKALDWAVDEKIKSGESGEVTTTHMLLGIWAQKGLAGQQILANLGFDD 236
Query: 121 EKAKEL-ESLSSE 132
+ A+EL ES+ E
Sbjct: 237 KNAEELAESIKEE 249
>gi|302759941|ref|XP_002963393.1| hypothetical protein SELMODRAFT_68238 [Selaginella moellendorffii]
gi|300168661|gb|EFJ35264.1| hypothetical protein SELMODRAFT_68238 [Selaginella moellendorffii]
Length = 137
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 102/126 (80%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+K+ TTGTE++LMGIL EGTS A+ +L ANGVTLFKVR E+V ++GK D +F
Sbjct: 12 MAELEARKMKYATTGTESLLMGILTEGTSKASLYLRANGVTLFKVRSEAVNVLGKADMYF 71
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ +DWAVD K G +GE++ + LLLGIW + +S G KILAALGF D
Sbjct: 72 FSPEHPPLTEPAQKALDWAVDEHQKLGANGEISTTLLLLGIWEQKNSAGQKILAALGFDD 131
Query: 121 EKAKEL 126
+KA+E+
Sbjct: 132 KKAQEI 137
>gi|302785814|ref|XP_002974678.1| hypothetical protein SELMODRAFT_58255 [Selaginella moellendorffii]
gi|300157573|gb|EFJ24198.1| hypothetical protein SELMODRAFT_58255 [Selaginella moellendorffii]
Length = 137
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 102/126 (80%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+K+ TTGTE++LMGIL EGTS A+ +L ANGVTLFKVR+E+V ++GK D +F
Sbjct: 12 MAELEARKMKYATTGTESLLMGILTEGTSKASLYLRANGVTLFKVRNEAVNVLGKADMYF 71
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
FSPEHPPLTE AQ+ +DWAVD K G +GE++ LLLGIW + +S G KILAALGF D
Sbjct: 72 FSPEHPPLTEPAQQALDWAVDEHQKLGANGEISTMLLLLGIWEQKNSAGQKILAALGFDD 131
Query: 121 EKAKEL 126
+KA+E+
Sbjct: 132 KKAQEI 137
>gi|168002922|ref|XP_001754162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694716|gb|EDQ81063.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKL++P TGTE+IL+GIL EGTS AA++L NGVTLF ++E +K++GK D ++
Sbjct: 11 MSELEARKLRYPNTGTESILLGILTEGTSEAARYLRKNGVTLFGAKEEIIKLLGKADMYY 70
Query: 61 FSPEHPPLTEDAQRVIDWAVDHK-LKSGNSG-EVTASDLLLGIWSETDSPGHKILAALGF 118
FSPEHPPLT+ AQ+ ++WAVD K + G S E++ + L+LGIW++ S G K+L LG
Sbjct: 71 FSPEHPPLTDSAQKALEWAVDPKNIPEGVSDRELSTTMLVLGIWAQKGSGGQKVLEKLGI 130
Query: 119 SDEKAKELESLSSE 132
+DEK EL + S+
Sbjct: 131 NDEKIAELAATVSD 144
>gi|356530949|ref|XP_003534041.1| PREDICTED: clp protease-related protein At4g12060,
chloroplastic-like [Glycine max]
Length = 181
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 76/86 (88%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
MGELEARKLK+P TGTEAILMGILVEGTS AAKFL ANG+TL K R+E+V+++GK D FF
Sbjct: 89 MGELEARKLKYPNTGTEAILMGILVEGTSNAAKFLRANGITLLKAREETVELLGKSDLFF 148
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKS 86
FSPEHPPLTE AQ+ +DWA++ KLKS
Sbjct: 149 FSPEHPPLTEPAQKALDWAIEEKLKS 174
>gi|168012015|ref|XP_001758698.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690308|gb|EDQ76676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 171
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARKLK+P TGTE++L+GIL EGTS AAKFL NGVTLF +DE + ++GK D ++
Sbjct: 12 MAELEARKLKYPNTGTESLLLGILTEGTSEAAKFLRKNGVTLFGAKDEIINLLGKADMYY 71
Query: 61 FSPEHPPLTEDAQRVIDWAVD--HKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
FSPEHPPLT AQ+ I WA D +K + + E++ + L++GIW++ S G KIL LG
Sbjct: 72 FSPEHPPLTSSAQKAIAWAADPANKPEWVSGEELSTTMLIIGIWAQKGSAGQKILEKLGI 131
Query: 119 SDEKAKEL 126
+D+K +L
Sbjct: 132 NDDKIAKL 139
>gi|388502860|gb|AFK39496.1| unknown [Medicago truncatula]
Length = 241
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 94/126 (74%), Gaps = 1/126 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELE RKLK+P GTEA+LMGIL+EGTS AAKFL ANG+T KVR+++++I+GK + +
Sbjct: 100 MSELETRKLKYPKLGTEALLMGILIEGTSKAAKFLRANGITYLKVREQTLEILGKSYWSY 159
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
SP LTE + +DWA++ KSG GE + LLLGIWS+ +S G K+L+ALGF+D
Sbjct: 160 SSPVVLSLTEPLHKALDWALNETSKSGE-GETNVTHLLLGIWSQEESAGRKVLSALGFND 218
Query: 121 EKAKEL 126
+KAKE+
Sbjct: 219 QKAKEI 224
>gi|224286561|gb|ACN40986.1| unknown [Picea sitchensis]
Length = 213
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 74/87 (85%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M ELEARK+K+PTTGTEA+LMGIL EGTS A+K+L ANGVTLFKVRDE+VK++GK +
Sbjct: 117 MAELEARKMKYPTTGTEALLMGILAEGTSPASKYLRANGVTLFKVRDEAVKLLGKSYPLY 176
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSG 87
SPEHP LTE AQ+ +DWAVD K+KSG
Sbjct: 177 TSPEHPTLTEPAQKALDWAVDEKIKSG 203
>gi|357481865|ref|XP_003611218.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355512553|gb|AES94176.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 205
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 73/86 (84%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M +EARKLK TTGTEA++MGIL+EGT+LA+KFL ANG+TLFKVRDE VKI+G+ D F
Sbjct: 96 MSAIEARKLKFTTTGTEALIMGILIEGTNLASKFLRANGITLFKVRDEIVKILGEVDPFT 155
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKS 86
+PE PP+T+DAQR +DWAVD KLKS
Sbjct: 156 ETPERPPMTDDAQRALDWAVDRKLKS 181
>gi|356540492|ref|XP_003538722.1| PREDICTED: LOW QUALITY PROTEIN: clp protease-related protein
At4g12060, chloroplastic-like, partial [Glycine max]
Length = 147
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAK-------FLWANGVTLFKVRDESVKIVGKGDFFFF 61
LK+ T GTEA+LMG+L+E + K FL + +F S+ IV + F
Sbjct: 17 LKYLTPGTEALLMGVLIECLYIKRKGERDRIRFLKFSICVVFNSESLSLSIVL---IYIF 73
Query: 62 SPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDE 121
S EHPPLT++AQR A+D K+K G+ G++T + +LLGIWSE DSPGHKIL+ LGF++E
Sbjct: 74 STEHPPLTDEAQR----ALDKKIKYGDGGKITTAHVLLGIWSEVDSPGHKILSTLGFNEE 129
Query: 122 KAKE-LESLSSEPGSVDD 138
KAKE LES +PG DD
Sbjct: 130 KAKELLESSIFKPGCSDD 147
>gi|427390984|ref|ZP_18885390.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732322|gb|EKU95132.1| hypothetical protein HMPREF9233_00893 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 866
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE +L+G++ EG +AAK L A G+TL +VR E ++I+G+G
Sbjct: 15 LAQEEARNLKHNYLGTEHVLLGLIREGEGVAAKALEALGITLDEVRAEVIEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++VI++A+ L+ G+S + LLLG+ E D ++L LG
Sbjct: 72 EQPSGHIPFTPRAKKVIEYAMREGLQLGHS-YIGTEHLLLGLTREPDGVAAQVLQKLG 128
>gi|434395188|ref|YP_007130135.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428267029|gb|AFZ32975.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 822
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E R+L H GTE IL+G++ EGT +AAK L GV+L R E KI+G+G+ F
Sbjct: 15 LSQEETRRLGHNLVGTEQILLGLIGEGTGVAAKVLTELGVSLQDARTEVEKIIGRGNRFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T +RV + A+ + GN+ + +LLG+ E D K+L+ LG
Sbjct: 75 --PAELPFTPKVKRVFEQALAEARQLGNN-YIDTEHILLGLLREGDGVAAKVLSNLGIHP 131
Query: 121 EKAK 124
E+ +
Sbjct: 132 EQIR 135
>gi|296131785|ref|YP_003639032.1| ATPase AAA [Thermincola potens JR]
gi|296030363|gb|ADG81131.1| ATPase AAA-2 domain protein [Thermincola potens JR]
Length = 810
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++L + GTE IL+G++ EG+ +AAK L+ GV KVR E K++GKG+F+
Sbjct: 15 LAQEEAKRLNYTYVGTEHILLGLIQEGSGIAAKVLYELGVDFNKVRSEVEKMIGKGEFYT 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
F LT A++V++ A D K G++ + LLLG+ E + ++L LG
Sbjct: 75 FG--EIGLTPRAKKVLELAFDEARKLGHN-YIGTEHLLLGLIREGEGVAARVLHNLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE +L+G++ EG +AA+ L GV V+ + ++G
Sbjct: 94 EARKLGHNYIGTEHLLLGLIREGEGVAARVLHNLGVDFQSVQKSVINMLG 143
>gi|119488402|ref|ZP_01621575.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455213|gb|EAW36353.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 828
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+GIL EGTS+AAK L GVTL R E I+G+G F P
Sbjct: 19 EARRLGHNFVGTEQLLLGILGEGTSVAAKLLSDRGVTLEDGRREVESIIGRGSGFI--PA 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A+RV + ++ + GN+ + +LLG+ + + K+L FS E+AK
Sbjct: 77 EIPFTPRAKRVFEGSLQEARQLGNN-YIGPEHILLGLLQDEEGVAAKVLE--NFSIERAK 133
>gi|297570833|ref|YP_003696607.1| ATPase AAA [Arcanobacterium haemolyticum DSM 20595]
gi|296931180|gb|ADH91988.1| ATPase AAA-2 domain protein [Arcanobacterium haemolyticum DSM
20595]
Length = 873
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE IL+G++ EG +AAK L A GV+ VRD+ V+I+G+G
Sbjct: 15 LAQEEARNLKHNYLGTEHILLGLIKEGEGVAAKALEALGVSFDAVRDQVVEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P H P T A++V+++A+ L+ G+S + LLLG+ E + ++L L
Sbjct: 72 EQPSGHIPFTPRAKKVLEYAMREGLQLGHS-YIGTEHLLLGLCREQEGVAAQVLVKL 127
>gi|452821448|gb|EME28478.1| [pt] ATP-dependent Clp protease ATP-binding subunit ClpB [Galdieria
sulphuraria]
Length = 847
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G+L E LA+K L GVTL R E KI+G+G F
Sbjct: 19 EARRLGHNFVGTEQVLLGLLAESNGLASKVLKLMGVTLKDARIEVEKIIGRGSGFVAV-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A+RV++ A++ G++ V LLLG+ SE D K+L LG E+ +
Sbjct: 77 EIPFTPRAKRVLELAIEEAKFIGHN-YVGTEHLLLGLLSEGDGVATKVLENLGVDLEQLR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKI-------VGKGD 57
EA+ + H GTE +L+G+L EG +A K L GV L ++R +++ + V
Sbjct: 94 EAKFIGHNYVGTEHLLLGLLSEGDGVATKVLENLGVDLEQLRQQTMDLIIEESEFVNANA 153
Query: 58 FFFFSPEHPPLTEDAQRVIDWAVDHKL 84
+ + + P L E + A++ KL
Sbjct: 154 YGYVRSKTPTLEEFGVNLTQLAIEGKL 180
>gi|113476893|ref|YP_722954.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167941|gb|ABG52481.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +A+K L NGV L R+E KI+G+G
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIASKVLKENGVNLKDARNEVEKIIGRGS--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
F+P P T +R+++ +++ K + + LLLG+ +++ K+L LG
Sbjct: 73 FTPAEIPFTPRVKRMLEISLEEARKL-DHNYIGTEHLLLGLLQDSEGVAAKVLDNLGVDK 131
Query: 121 EKAK 124
K +
Sbjct: 132 GKIR 135
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EARKL H GTE +L+G+L + +AAK L GV K+R + ++ +G+
Sbjct: 94 EARKLDHNYIGTEHLLLGLLQDSEGVAAKVLDNLGVDKGKIRTQVIRSLGE 144
>gi|302390639|ref|YP_003826460.1| ATPase AAA [Thermosediminibacter oceani DSM 16646]
gi|302201267|gb|ADL08837.1| ATPase AAA-2 domain protein [Thermosediminibacter oceani DSM 16646]
Length = 814
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR++ +++G G F P
Sbjct: 19 EARRLNHNVVGTEHLLLGLIREGEGVAARALQNLGVELSKVREQVQRLIGVGPFVVQGP- 77
Query: 65 HPPLTEDAQRVIDWAVD--HKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T A+RV++ A+D +LK G +LLG+ E + ++LA LG S E+
Sbjct: 78 -IGYTPRAKRVLELALDESRRLKHNYVG---TEHILLGLIREGEGVAAQVLANLGVSLER 133
Query: 123 AK 124
A+
Sbjct: 134 AR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG---KGD-FFF 60
E+R+LKH GTE IL+G++ EG +AA+ L GV+L + R E + ++G KG F
Sbjct: 94 ESRRLKHNYVGTEHILLGLIREGEGVAAQVLANLGVSLERARTEVLSLLGSDVKGHPGFR 153
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKL 84
S P L + ++ + + A + KL
Sbjct: 154 KSGNTPTLNQFSRDLTELAAEGKL 177
>gi|254416553|ref|ZP_05030305.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196176757|gb|EDX71769.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 827
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G+L EGTS+AA L VTL R KI+G+G F
Sbjct: 15 LAQEEARRLGHNLVGTEQILLGLLREGTSVAAIVLKEMDVTLESTRKVVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T A+R+ + + + G++ + LLL I +TDS K+L +LG +
Sbjct: 75 --PAEIPFTPKAKRLFEQSFKEARQLGHN-YIGPEHLLLAILQDTDSVAGKVLQSLGVNP 131
Query: 121 EKAK 124
A+
Sbjct: 132 STAR 135
>gi|428211805|ref|YP_007084949.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000186|gb|AFY81029.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 828
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+G++ EGT +AA+ L + GVTL K R E KI+G+G F
Sbjct: 15 LAQQEARRLGHNFVGTEQLLLGLIAEGTGIAAQVLKSEGVTLNKARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T + +++ ++ + G + LLL + + KIL LG S
Sbjct: 75 --PVEIPFTPRGKSILEMSLREASQLGQQ-YIATEHLLLALTQSREGVAFKILENLGVSL 131
Query: 121 EKAK 124
E+ +
Sbjct: 132 ERVR 135
>gi|416380079|ref|ZP_11684027.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
gi|357265734|gb|EHJ14459.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Crocosphaera
watsonii WH 0003]
Length = 809
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 1 MAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 60
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG +
Sbjct: 61 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVNL 117
Query: 121 EKAK 124
K +
Sbjct: 118 SKVR 121
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 80 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVNLSKVRTQVIRQLGE 130
>gi|269218173|ref|ZP_06162027.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
gi|269212301|gb|EEZ78641.1| negative regulator of genetic competence ClpC/MecB [Actinomyces sp.
oral taxon 848 str. F0332]
Length = 861
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR LKH GTE L+G++ EG +AAK L A +TL +VR + + I+G+G P
Sbjct: 19 EARNLKHNYLGTEHFLLGLIREGEGVAAKALEALDITLDEVRAQVIDIIGEGQ----EPP 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++VI++A+ L+ G+S + LLLG+ E D ++L LG
Sbjct: 75 SGHIPFTPRAKKVIEYAMREGLQLGHS-YIGTEHLLLGLTREPDGVAAQVLTKLG 128
>gi|334117325|ref|ZP_08491417.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|333462145|gb|EGK90750.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
Length = 822
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L G+ L + R+E I+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAKVLLDMGLNLKEARNEIENIIGRGSGFL 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T +R+ + A++ + G++ + +LLG+ + + K+L LG
Sbjct: 75 --PPEIPFTPRVKRIFETALNEARQLGHN-YIGTEHILLGLIQDDEGVAAKVLQNLGIDR 131
Query: 121 EKAK 124
++ +
Sbjct: 132 QRVR 135
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE IL+G++ + +AAK L G+ +VR + ++ VG+
Sbjct: 94 EARQLGHNYIGTEHILLGLIQDDEGVAAKVLQNLGIDRQRVRTQVIRAVGE 144
>gi|428319462|ref|YP_007117344.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|428243142|gb|AFZ08928.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 822
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L G+ L + R+E I+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAKVLLDMGLNLKEARNEIENIIGRGSGFL 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T +R+ + A++ + G++ + +LLG+ + + K+L LG
Sbjct: 75 --PPEIPFTPRVKRIFETALNEARQLGHN-YIGTEHILLGLIQDDEGVAAKVLQNLGIDR 131
Query: 121 EKAK 124
++ +
Sbjct: 132 QRVR 135
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE IL+G++ + +AAK L G+ +VR + ++ VG+
Sbjct: 94 EARQLGHNYIGTEHILLGLIQDDEGVAAKVLQNLGIDRQRVRTQVIRAVGE 144
>gi|56751262|ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
gi|56686221|dbj|BAD79443.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301]
Length = 839
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 30 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 89
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 90 AA--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 146
Query: 121 EKAK 124
K +
Sbjct: 147 SKVR 150
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 109 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 159
>gi|317970390|ref|ZP_07971780.1| ATPase [Synechococcus sp. CB0205]
Length = 850
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AVVE-IPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 132
Query: 121 EKAK 124
K +
Sbjct: 133 AKVR 136
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 95 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 145
>gi|375084709|ref|ZP_09731569.1| hypothetical protein HMPREF9454_00180 [Megamonas funiformis YIT
11815]
gi|374567956|gb|EHR39154.1| hypothetical protein HMPREF9454_00180 [Megamonas funiformis YIT
11815]
Length = 848
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ LKH GTE IL+G+L EGT++AAK L + G+ L+ VR ++V K DF
Sbjct: 15 LAQYEAKHLKHAHVGTEYILLGLLHEGTNVAAKALSSIGIDLYTVRQRVHELVEKEDFDD 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
E + +A+ ++++AV+ G+ + +LLGI +T+S +IL +LG
Sbjct: 75 LETEEIGYSPEAKTIMEYAVEQAQALGHD-YIGTEHILLGIIYDTESIACEILVSLG 130
>gi|209526842|ref|ZP_03275362.1| Clp domain protein [Arthrospira maxima CS-328]
gi|209492713|gb|EDZ93048.1| Clp domain protein [Arthrospira maxima CS-328]
Length = 402
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|218290044|ref|ZP_03494211.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239878|gb|EED07066.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 812
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L HP GTE IL+G++ EG +AAK L GV KV+ E ++VG+G
Sbjct: 16 LAQEEASRLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQQEIERMVGRGQTPV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V LLLG+ E + ++LA + +
Sbjct: 76 TAMTYTP---RAKKVIELSIDEARKLGHS-YVGTEHLLLGLIREGEGVAARVLANMNVNL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE +L+G++ EG +AA+ L V L K R + ++++G
Sbjct: 94 EARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVLQLLG 143
>gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
gi|67857006|gb|EAM52246.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N
terminal [Crocosphaera watsonii WH 8501]
Length = 823
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG +
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVNL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVNLSKVRTQVIRQLGE 144
>gi|443323335|ref|ZP_21052342.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
gi|442786899|gb|ELR96625.1| ATPase with chaperone activity, ATP-binding subunit [Gloeocapsa sp.
PCC 73106]
Length = 820
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARTEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|384136760|ref|YP_005519474.1| ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339290845|gb|AEJ44955.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 812
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L HP GTE IL+G++ EG +AAK L GV KV+ E ++VG+G
Sbjct: 16 LAQEEASRLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQQEIERMVGRGQTPV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V LLLG+ E + ++LA + +
Sbjct: 76 TAMTYTP---RAKKVIELSIDEARKLGHS-YVGTEHLLLGLIREGEGVAARVLANMNVNL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE +L+G++ EG +AA+ L V L K R + ++++G
Sbjct: 94 EARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVLQLLG 143
>gi|405981990|ref|ZP_11040314.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
gi|404390781|gb|EJZ85847.1| hypothetical protein HMPREF9240_01320 [Actinomyces neuii BVS029A5]
Length = 841
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L V+ KVRDE V I+G GD P
Sbjct: 19 EARNLNHNYIGTEHLLLGLITEGEGVAAKALEMMDVSRDKVRDEVVTIIGSGDQPV--PG 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 77 HIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLTNLG 128
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L VR V+++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLTNLGADLQTVRHNVVQLL 142
>gi|428305782|ref|YP_007142607.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428247317|gb|AFZ13097.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 815
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
E R+L H GTE IL+G++ EGTS+AAK L G L K R E KI+G+G F PE
Sbjct: 19 ETRRLGHTLVGTEQILLGLIGEGTSVAAKILVERGANLQKARKEVEKIIGRGSRFV--PE 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNS 89
P+T +R+ D A+ + G++
Sbjct: 77 QIPVTPKVKRIFDQALIESQQLGHN 101
>gi|427722144|ref|YP_007069421.1| ATPase [Leptolyngbya sp. PCC 7376]
gi|427353864|gb|AFY36587.1| ATPase AAA-2 domain protein [Leptolyngbya sp. PCC 7376]
Length = 820
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK------GDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGSG 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
S + P L E + A D KL G E+ +LG ++ +
Sbjct: 154 GSRSNKTPTLDEFGSNLTQLAKDSKLDPVVGRQKEIERVIQILGRRTKNN 203
>gi|170076773|ref|YP_001733411.1| endopeptidase Clp, ATP-binding subunit C [Synechococcus sp. PCC
7002]
gi|169884442|gb|ACA98155.1| endopeptidase Clp, ATP-binding chain C, protease regulatory subunit
[Synechococcus sp. PCC 7002]
Length = 821
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK------GDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAAGGG 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
S + P L E + A D KL G E+ +LG ++ +
Sbjct: 154 SSRSNKTPTLDEFGSNLTQLAKDGKLDPVVGRQNEIERVIQILGRRTKNN 203
>gi|166368696|ref|YP_001660969.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|425465251|ref|ZP_18844561.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
gi|166091069|dbj|BAG05777.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
gi|389832560|emb|CCI23740.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9809]
Length = 821
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLRDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|443311631|ref|ZP_21041257.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442778360|gb|ELR88627.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 829
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSP 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + SP
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVNAGSP 153
Query: 64 ----EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A D KL G + E+ +LG ++ +
Sbjct: 154 SGRTKTPTLDEFGSNLTQMAADGKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|11465497|ref|NP_045112.1| Clp protease ATP binding subunit [Cyanidium caldarium]
gi|14194537|sp|Q9TM05.1|CLPC_CYACA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|6466400|gb|AAF12982.1|AF022186_105 unknown [Cyanidium caldarium]
Length = 854
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+GIL EGT LAAK L + G+TL R E KI+G+G F
Sbjct: 46 LAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDARIEVEKIIGRGSGFV 105
Query: 61 FSPEHPPLTEDAQRVIDWAVDH-KLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+++++ A++ ++ + N V LLLG+ E + ++L LG
Sbjct: 106 AI--EIPFTPRAKKILELAIEESRILTHNY--VGTEHLLLGLIKEGEGVAARVLENLG 159
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
E+R L H GTE +L+G++ EG +AA+ L GV L K+R ++++G+
Sbjct: 125 ESRILTHNYVGTEHLLLGLIKEGEGVAARVLENLGVDLPKLRSNIIRMIGE 175
>gi|443316093|ref|ZP_21045553.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784324|gb|ELR94204.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 823
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|383323125|ref|YP_005383978.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326294|ref|YP_005387147.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492178|ref|YP_005409854.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437446|ref|YP_005652170.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451815537|ref|YP_007451989.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|1001555|dbj|BAA10182.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|339274478|dbj|BAK50965.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|359272444|dbj|BAL29963.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275614|dbj|BAL33132.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278784|dbj|BAL36301.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961235|dbj|BAM54475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
gi|451781506|gb|AGF52475.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803]
Length = 821
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|428223959|ref|YP_007108056.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983860|gb|AFY65004.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|428778441|ref|YP_007170227.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428692720|gb|AFZ48870.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 823
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|411117307|ref|ZP_11389794.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410713410|gb|EKQ70911.1| ATPase with chaperone activity, ATP-binding subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 822
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|425437952|ref|ZP_18818364.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
gi|389676952|emb|CCH94083.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9432]
Length = 821
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|148239871|ref|YP_001225258.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. WH 7803]
gi|147848410|emb|CAK23961.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. WH 7803]
Length = 844
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 2 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 61
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 62 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 118
Query: 121 EKAK 124
K +
Sbjct: 119 SKVR 122
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 81 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 131
>gi|186686024|ref|YP_001869220.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186468476|gb|ACC84277.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 822
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++ G+ SP
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRML--GETAEVSPG 151
Query: 64 ------EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A+D+KL G + E+ +LG ++ +
Sbjct: 152 GSSGRTKTPTLDEFGSNLTQMAIDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|81299071|ref|YP_399279.1| ATPase [Synechococcus elongatus PCC 7942]
gi|81167952|gb|ABB56292.1| ATPase [Synechococcus elongatus PCC 7942]
Length = 824
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|755163|gb|AAB67745.1| ClpC [Synechococcus elongatus PCC 7942]
Length = 839
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 30 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 89
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 90 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 146
Query: 121 EKAK 124
K +
Sbjct: 147 SKVR 150
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 109 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 159
>gi|427734429|ref|YP_007053973.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427369470|gb|AFY53426.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 831
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|75907133|ref|YP_321429.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75700858|gb|ABA20534.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 823
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + +
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQ 153
Query: 65 H-----PPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
P L E + A D+KL G + E+ +LG ++ +
Sbjct: 154 SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|17230491|ref|NP_487039.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 839
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 31 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 90
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 91 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 147
Query: 121 EKAK 124
K +
Sbjct: 148 SKVR 151
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + +
Sbjct: 110 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQ 169
Query: 65 H-----PPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
P L E + A D+KL G + E+ +LG ++ +
Sbjct: 170 SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 218
>gi|298492878|ref|YP_003723055.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298234796|gb|ADI65932.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 824
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK------GDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSPGGG 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A D+KL G + E+ +LG ++ +
Sbjct: 154 SSGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 203
>gi|427706010|ref|YP_007048387.1| ATPase [Nostoc sp. PCC 7107]
gi|427358515|gb|AFY41237.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 823
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + +
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQ 153
Query: 65 H-----PPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
P L E + A D+KL G + E+ +LG ++ +
Sbjct: 154 SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|334338866|ref|YP_004543846.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum ruminis
DSM 2154]
gi|334090220|gb|AEG58560.1| ATPase AAA-2 domain protein [Desulfotomaculum ruminis DSM 2154]
Length = 815
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+LK+P GTE IL+G++ E AA+ L G++ +V ++VG GD
Sbjct: 15 LAQEEARRLKYPLIGTEHILLGLIREDQGFAARALEQMGISADRVAQAVEQVVGVGDQAV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T A+RV++ AV+ + +S N V +LLG+ E + ++L +LG
Sbjct: 75 --PAEIPATARAKRVLELAVE-EARSLNHNYVGTEHILLGLIREGEGVAAQVLISLGADM 131
Query: 121 EKAKE 125
E+A++
Sbjct: 132 ERARQ 136
>gi|422414677|ref|ZP_16491634.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria innocua FSL J1-023]
gi|313625392|gb|EFR95175.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua FSL J1-023]
Length = 213
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISAEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|434393419|ref|YP_007128366.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
gi|428265260|gb|AFZ31206.1| ATPase AAA-2 domain protein [Gloeocapsa sp. PCC 7428]
Length = 825
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|332706083|ref|ZP_08426155.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332355175|gb|EGJ34643.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|428303861|ref|YP_007140686.1| ATPase [Crinalium epipsammum PCC 9333]
gi|428245396|gb|AFZ11176.1| ATPase AAA-2 domain protein [Crinalium epipsammum PCC 9333]
Length = 826
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKI------VGKGDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + +++ VG G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVGAGAS 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A D KL G S E+ +LG ++ +
Sbjct: 154 SQGRTKTPTLDEFGSNLTQMAADGKLDPVVGRSKEIERVIQILGRRTKNN 203
>gi|78043878|ref|YP_361153.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
gi|77995993|gb|ABB14892.1| negative regulator of genetic competence clpC/mecB
[Carboxydothermus hydrogenoformans Z-2901]
Length = 811
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EARK+ +P TE +L+GI+ EG S+AAK L G+ KVR++ +++VG G+
Sbjct: 15 MAQEEARKMNYPYVATEHLLLGIINEGESVAAKVLENLGIDGQKVREKILELVGPGEGPM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +VD + G++ V LLLG+ E + ++L +LG
Sbjct: 75 --PAEIAFTPRAKRVLELSVDEAARFGHN-YVGTEHLLLGLIREGEGVAARVLVSLGADL 131
Query: 121 EKAK 124
E+ +
Sbjct: 132 ERVR 135
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EA + H GTE +L+G++ EG +AA+ L + G L +VR E +++ G
Sbjct: 94 EAARFGHNYVGTEHLLLGLIREGEGVAARVLVSLGADLERVRAEITQVLSGG 145
>gi|422417724|ref|ZP_16494679.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria seeligeri FSL N1-067]
gi|313635095|gb|EFS01443.1| negative regulator of genetic competence ClpC/MecB [Listeria
seeligeri FSL N1-067]
Length = 619
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ GV+ KV+ E ++G GD + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGVSSEKVQQEVEGLIGHGDKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|300864107|ref|ZP_07109004.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
gi|300337892|emb|CBN54150.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|220910059|ref|YP_002485370.1| ATPase AAA [Cyanothece sp. PCC 7425]
gi|219866670|gb|ACL47009.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7425]
Length = 825
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|87303420|ref|ZP_01086208.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
gi|87282068|gb|EAQ74030.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 5701]
Length = 856
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|434396958|ref|YP_007130962.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428268055|gb|AFZ33996.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|119512929|ref|ZP_01631992.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
gi|119462425|gb|EAW43399.1| endopeptidase Clp ATP-binding chain [Nodularia spumigena CCY9414]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSP 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + P
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGP 153
Query: 64 ----EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + AVD+KL G + E+ +LG ++ +
Sbjct: 154 SGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|443329502|ref|ZP_21058087.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442790840|gb|ELS00342.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQIIRMLGE 144
>gi|428775828|ref|YP_007167615.1| ATPase [Halothece sp. PCC 7418]
gi|428690107|gb|AFZ43401.1| ATPase AAA-2 domain protein [Halothece sp. PCC 7418]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|440683788|ref|YP_007158583.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428680907|gb|AFZ59673.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 824
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++ G+ SP
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRML--GETAEVSPG 151
Query: 64 -------EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A D+KL G + E+ +LG ++ +
Sbjct: 152 GGPSGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 203
>gi|86605369|ref|YP_474132.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
gi|86553911|gb|ABC98869.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp. JA-3-3Ab]
Length = 824
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212631|dbj|BAC90005.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
Length = 819
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|282896301|ref|ZP_06304323.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
gi|281198797|gb|EFA73676.1| UvrB/UvrC protein [Raphidiopsis brookii D9]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++ G+ +P
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRML--GETAEVTPG 151
Query: 64 ------EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + AVD+KL G + E+ +LG ++ +
Sbjct: 152 GSSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|257059311|ref|YP_003137199.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256589477|gb|ACV00364.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGE 144
>gi|113476064|ref|YP_722125.1| ATPase [Trichodesmium erythraeum IMS101]
gi|110167112|gb|ABG51652.1| ATPase AAA-2 [Trichodesmium erythraeum IMS101]
Length = 825
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|427717814|ref|YP_007065808.1| ATPase [Calothrix sp. PCC 7507]
gi|427350250|gb|AFY32974.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + +
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGQ 153
Query: 65 H-----PPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
P L E + A D+KL G + E+ +LG ++ +
Sbjct: 154 SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|218246261|ref|YP_002371632.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218166739|gb|ACK65476.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGE 144
>gi|172039160|ref|YP_001805661.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp. ATCC
51142]
gi|354552562|ref|ZP_08971870.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
gi|171700614|gb|ACB53595.1| ATP-dependent Clp protease, regulatory subunit [Cyanothece sp. ATCC
51142]
gi|353555884|gb|EHC25272.1| ATPase AAA-2 domain protein [Cyanothece sp. ATCC 51472]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGE 144
>gi|434403231|ref|YP_007146116.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257486|gb|AFZ23436.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++ G+ SP
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRML--GETAEVSPG 151
Query: 64 ------EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + AVD+KL G + E+ +LG ++ +
Sbjct: 152 GPSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|427727388|ref|YP_007073625.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427363307|gb|AFY46028.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 856
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 48 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 107
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 108 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 164
Query: 121 EKAK 124
K +
Sbjct: 165 SKVR 168
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFS-- 62
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ +
Sbjct: 127 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVSATGS 186
Query: 63 ---PEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A D+KL G + E+ +LG ++ +
Sbjct: 187 SGRTKTPTLDEFGSNLTQMATDNKLDPVVGRAKEIERVIQILGRRTKNN 235
>gi|425451878|ref|ZP_18831697.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
gi|389766574|emb|CCI07823.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 7941]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|334118189|ref|ZP_08492279.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428317617|ref|YP_007115499.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
gi|333460174|gb|EGK88784.1| ATPase AAA-2 domain protein [Microcoleus vaginatus FGP-2]
gi|428241297|gb|AFZ07083.1| ATPase AAA-2 domain protein [Oscillatoria nigro-viridis PCC 7112]
Length = 825
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFS-- 62
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ +
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVAATGG 153
Query: 63 ---PEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + AVD KL G E+ +LG ++ +
Sbjct: 154 GARTKTPTLDEFGANLTQMAVDGKLDPVVGRQKEIERVIQILGRRTKNN 202
>gi|282900556|ref|ZP_06308498.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281194356|gb|EFA69311.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++ G+ +P
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRML--GETAEVTPG 151
Query: 64 ------EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + AVD+KL G + E+ +LG ++ +
Sbjct: 152 GSSGRTKTPTLDEFGSNLTQMAVDNKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|213965131|ref|ZP_03393329.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
gi|213952245|gb|EEB63629.1| ATPase family associated with various cellular activities (AAA)
protein [Corynebacterium amycolatum SK46]
Length = 910
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EG +AAK L + G++L VR E V I+G+G P
Sbjct: 19 EARELNHNYIGTEHILLGLISEGDGVAAKALESMGISLDAVRSEVVDIIGRGS----QPP 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 75 SGHVPFTPRAKKVLEYSLREALQLGHK-YIGTEHLLLGLIREGEGVAAQVLVKLG 128
>gi|425443940|ref|ZP_18824003.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|425455767|ref|ZP_18835478.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
gi|389732831|emb|CCI03294.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9443]
gi|389803296|emb|CCI17774.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9807]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|119487029|ref|ZP_01620901.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
gi|119455958|gb|EAW37092.1| ATP-dependent Clp protease regulatory subunit [Lyngbya sp. PCC
8106]
Length = 825
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|428220165|ref|YP_007104335.1| chaperone ATPase [Synechococcus sp. PCC 7502]
gi|427993505|gb|AFY72200.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 7502]
Length = 828
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|254414473|ref|ZP_05028239.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
gi|196178703|gb|EDX73701.1| ATPase, AAA family [Coleofasciculus chthonoplastes PCC 7420]
Length = 824
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|126657032|ref|ZP_01728203.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
gi|126621575|gb|EAZ92285.1| ATP-dependent Clp protease regulatory subunit [Cyanothece sp.
CCY0110]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGE 144
>gi|116073045|ref|ZP_01470307.1| ATPase [Synechococcus sp. RS9916]
gi|116068350|gb|EAU74102.1| ATPase [Synechococcus sp. RS9916]
Length = 859
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|428301853|ref|YP_007140159.1| ATPase [Calothrix sp. PCC 6303]
gi|428238397|gb|AFZ04187.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 823
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSP 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + P
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGETAEVTQGGP 153
Query: 64 ----EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A+D KL G + E+ +LG ++ +
Sbjct: 154 SSRTKTPTLDEFGSNLTQMAIDGKLDPVVGRAKEIERVIQILGRRTKNN 202
>gi|428313889|ref|YP_007124866.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428255501|gb|AFZ21460.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|427420614|ref|ZP_18910797.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425756491|gb|EKU97345.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|260435541|ref|ZP_05789511.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
gi|260413415|gb|EEX06711.1| chaperone protein ClpB 1 [Synechococcus sp. WH 8109]
Length = 846
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|88808913|ref|ZP_01124422.1| ATPase [Synechococcus sp. WH 7805]
gi|88786855|gb|EAR18013.1| ATPase [Synechococcus sp. WH 7805]
Length = 857
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|425438612|ref|ZP_18818956.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|425462269|ref|ZP_18841743.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|425470166|ref|ZP_18849036.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440752077|ref|ZP_20931280.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443661761|ref|ZP_21132789.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|159029700|emb|CAO87778.1| clpC [Microcystis aeruginosa PCC 7806]
gi|389720211|emb|CCH96065.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9717]
gi|389824679|emb|CCI26165.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9808]
gi|389884278|emb|CCI35401.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|440176570|gb|ELP55843.1| clp amino terminal domain protein [Microcystis aeruginosa TAIHU98]
gi|443332247|gb|ELS46866.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|78184962|ref|YP_377397.1| ATPase [Synechococcus sp. CC9902]
gi|78169256|gb|ABB26353.1| ATPase [Synechococcus sp. CC9902]
Length = 843
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK--------- 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVTAGGG 153
Query: 56 GDFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
G S + P L E + A + KL D ++G ++E D +++
Sbjct: 154 GGGAKGSTKTPTLDEFGTNLTQMATESKL-----------DPVVGRYNEID----RVIQI 198
Query: 116 LGFSDEKAKELESLSSEPG 134
LG + K L EPG
Sbjct: 199 LG---RRTKNNPVLIGEPG 214
>gi|422303962|ref|ZP_16391311.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
gi|389791002|emb|CCI13172.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9806]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|443476197|ref|ZP_21066115.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
gi|443018866|gb|ELS33048.1| ATPase AAA-2 domain protein [Pseudanabaena biceps PCC 7429]
Length = 829
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|428219225|ref|YP_007103690.1| ATPase [Pseudanabaena sp. PCC 7367]
gi|427991007|gb|AFY71262.1| ATPase AAA-2 domain protein [Pseudanabaena sp. PCC 7367]
Length = 831
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|318040228|ref|ZP_07972184.1| ATPase [Synechococcus sp. CB0101]
Length = 853
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|148241887|ref|YP_001227044.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Synechococcus sp. RCC307]
gi|147850197|emb|CAK27691.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Synechococcus sp. RCC307]
Length = 852
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|427714632|ref|YP_007063256.1| chaperone ATPase [Synechococcus sp. PCC 6312]
gi|427378761|gb|AFY62713.1| ATPase with chaperone activity, ATP-binding subunit [Synechococcus
sp. PCC 6312]
Length = 824
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|87124752|ref|ZP_01080600.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
gi|86167631|gb|EAQ68890.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. RS9917]
Length = 860
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|428211987|ref|YP_007085131.1| chaperone ATPase [Oscillatoria acuminata PCC 6304]
gi|428000368|gb|AFY81211.1| ATPase with chaperone activity, ATP-binding subunit [Oscillatoria
acuminata PCC 6304]
Length = 822
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|33865472|ref|NP_897031.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102]
Length = 846
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|307154665|ref|YP_003890049.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984893|gb|ADN16774.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|116072469|ref|ZP_01469736.1| ATPase [Synechococcus sp. BL107]
gi|116064991|gb|EAU70750.1| ATPase [Synechococcus sp. BL107]
Length = 843
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|337751755|ref|YP_004645917.1| protein ClpC [Paenibacillus mucilaginosus KNP414]
gi|336302944|gb|AEI46047.1| ClpC [Paenibacillus mucilaginosus KNP414]
Length = 814
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPSNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLGNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G + SP
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSSE--VVSPN 151
Query: 65 H 65
H
Sbjct: 152 H 152
>gi|255022726|ref|ZP_05294712.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-208]
Length = 139
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDE 48
EARKL H GTE IL+G++ EG +AA+ L G++L K R +
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQ 137
>gi|254431180|ref|ZP_05044883.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
gi|197625633|gb|EDY38192.1| ATPase, AAA family [Cyanobium sp. PCC 7001]
Length = 843
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK------GDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVAAGGG 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKL 84
S + P L E + A D KL
Sbjct: 154 GKGSTKTPTLDEFGSNLTQQAADGKL 179
>gi|218438847|ref|YP_002377176.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218171575|gb|ACK70308.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|379724697|ref|YP_005316828.1| protein ClpC [Paenibacillus mucilaginosus 3016]
gi|386727451|ref|YP_006193777.1| protein ClpC [Paenibacillus mucilaginosus K02]
gi|378573369|gb|AFC33679.1| ClpC [Paenibacillus mucilaginosus 3016]
gi|384094576|gb|AFH66012.1| protein ClpC [Paenibacillus mucilaginosus K02]
Length = 814
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPSNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLGNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G + SP
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSSE--VVSPN 151
Query: 65 H 65
H
Sbjct: 152 H 152
>gi|158335106|ref|YP_001516278.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
gi|158305347|gb|ABW26964.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris
marina MBIC11017]
Length = 822
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|78213152|ref|YP_381931.1| ATPase [Synechococcus sp. CC9605]
gi|78197611|gb|ABB35376.1| ATPase [Synechococcus sp. CC9605]
Length = 846
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|427701534|ref|YP_007044756.1| chaperone ATPase [Cyanobium gracile PCC 6307]
gi|427344702|gb|AFY27415.1| ATPase with chaperone activity, ATP-binding subunit [Cyanobium
gracile PCC 6307]
Length = 849
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK------GDF 58
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGETAEVTSGSS 153
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
S + P L E + A + KL D ++G +E D +++ LG
Sbjct: 154 GKGSTKTPTLDEFGSNLTQLAAESKL-----------DPVVGRQNEID----RVIQILG- 197
Query: 119 SDEKAKELESLSSEPG 134
+ K L EPG
Sbjct: 198 --RRTKNNPVLIGEPG 211
>gi|428210348|ref|YP_007094701.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428012269|gb|AFY90832.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 824
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKTMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|284929449|ref|YP_003421971.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
gi|284809893|gb|ADB95590.1| ATPase with chaperone activity, ATP-binding subunit [cyanobacterium
UCYN-A]
Length = 825
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRQLGE 144
>gi|113955104|ref|YP_730239.1| Clp protease ATP-binding subunit ClpC [Synechococcus sp. CC9311]
gi|113882455|gb|ABI47413.1| putative Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
CC9311]
Length = 860
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|359457125|ref|ZP_09245688.1| ATP-dependent protease, ATP-binding subunit ClpC [Acaryochloris sp.
CCMEE 5410]
Length = 822
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|352093666|ref|ZP_08954837.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
gi|351680006|gb|EHA63138.1| ATPase AAA-2 domain protein [Synechococcus sp. WH 8016]
Length = 860
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|414079261|ref|YP_007000685.1| ATP-dependent Clp family protein [Anabaena sp. 90]
gi|413972540|gb|AFW96628.1| ATP-dependent Clp family protein [Anabaena sp. 90]
Length = 838
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 31 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 90
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 91 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 147
Query: 121 EKAK 124
K +
Sbjct: 148 TKVR 151
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSP 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + P
Sbjct: 110 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGETAEVTPGGP 169
Query: 64 ----EHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
+ P L E + A+D+KL G + E+ +LG ++ +
Sbjct: 170 SGRTKTPTLDEFGSNLTQMAIDNKLDPVVGRAKEIERVIQILGRRTKNN 218
>gi|254422552|ref|ZP_05036270.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196190041|gb|EDX85005.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 826
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|422411601|ref|ZP_16488560.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria innocua FSL S4-378]
gi|313620951|gb|EFR92113.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua FSL S4-378]
Length = 214
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|258512699|ref|YP_003186133.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257479425|gb|ACV59744.1| ATPase AAA-2 domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 812
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA L HP GTE IL+G++ EG +AAK L GV KV+ E ++VG+G
Sbjct: 16 LAQEEASNLNHPGVGTEHILLGLIREGEGIAAKALQMLGVQADKVQQEIERMVGRGQTPV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V LLLG+ E + ++LA + +
Sbjct: 76 TAMTYTP---RAKKVIELSIDEARKLGHS-YVGTEHLLLGLIREGEGVAARVLANMNVNL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE +L+G++ EG +AA+ L V L K R + ++++G
Sbjct: 94 EARKLGHSYVGTEHLLLGLIREGEGVAARVLANMNVNLNKARQQVLQLLG 143
>gi|402813961|ref|ZP_10863555.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
alvei DSM 29]
gi|402507808|gb|EJW18329.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
alvei DSM 29]
Length = 283
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G P
Sbjct: 20 EAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQDEVETLIGRGQ---EQPL 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ T A++VI+ ++D K G++ V +LLG+ E + ++L LG S KA+
Sbjct: 77 NIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|307104044|gb|EFN52300.1| hypothetical protein CHLNCDRAFT_32555 [Chlorella variabilis]
Length = 844
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ E T +AAK L + GVTL R E KI+G+G F
Sbjct: 21 LAQEEARRLGHNFVGTEQILLGLIGESTGIAAKVLKSMGVTLKDARVEVEKIIGRGSGFV 80
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ G++ + +LLG+ E + ++L LG
Sbjct: 81 AV--EIPFTPRAKRVLELSLEEARALGHN-YIGTEHILLGLLREGEGVASRVLETLGADP 137
Query: 121 EKAK 124
+K +
Sbjct: 138 QKIR 141
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR L H GTE IL+G+L EG +A++ L G K+R + +++VG+
Sbjct: 100 EARALGHNYIGTEHILLGLLREGEGVASRVLETLGADPQKIRTQVIRMVGE 150
>gi|334136731|ref|ZP_08510188.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
gi|333605752|gb|EGL17109.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF7]
Length = 815
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPSNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|430748562|ref|YP_007211470.1| chaperone ATPase [Thermobacillus composti KWC4]
gi|430732527|gb|AGA56472.1| ATPase with chaperone activity, ATP-binding subunit [Thermobacillus
composti KWC4]
Length = 818
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALTALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPANIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|421858335|ref|ZP_16290606.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832093|dbj|GAC41043.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 812
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|428770031|ref|YP_007161821.1| ATPase [Cyanobacterium aponinum PCC 10605]
gi|428684310|gb|AFZ53777.1| ATPase AAA-2 domain protein [Cyanobacterium aponinum PCC 10605]
Length = 822
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLG 128
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFF--- 61
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ +
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLGKVRTQVIRMLGETETTAVGVG 153
Query: 62 ----SPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
S + P L E + AVD KL G E+ +LG ++ +
Sbjct: 154 GGSRSNKTPTLDEFGSNLTVLAVDGKLDPVVGRQKEIERVIQILGRRTKNN 204
>gi|357012846|ref|ZP_09077845.1| ClpC [Paenibacillus elgii B69]
Length = 814
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPSNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G + SP
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSSE--VVSPN 151
Query: 65 H 65
H
Sbjct: 152 H 152
>gi|434389096|ref|YP_007099707.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
gi|428020086|gb|AFY96180.1| ATPase with chaperone activity, ATP-binding subunit [Chamaesiphon
minutus PCC 6605]
Length = 833
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGINLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|406983152|gb|EKE04399.1| hypothetical protein ACD_20C00084G0019 [uncultured bacterium]
Length = 837
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L A GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKTLKAMGVNLKDSRVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ + D + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSWDEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 NKVR 135
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLNKVRSNVIRMLGE 144
>gi|374603227|ref|ZP_09676209.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
gi|374391096|gb|EHQ62436.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
dendritiformis C454]
Length = 812
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALVALGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|72382499|ref|YP_291854.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str.
NATL2A]
gi|72002349|gb|AAZ58151.1| ATPase [Prochlorococcus marinus str. NATL2A]
Length = 855
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSRVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + V+++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVVRMLGE 144
>gi|89100727|ref|ZP_01173582.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
gi|89084544|gb|EAR63690.1| class III stress response-related ATPase [Bacillus sp. NRRL
B-14911]
Length = 817
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHSNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQKEVENLIGRGQDSS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+P + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTPHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G D
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSND 146
>gi|423349871|ref|ZP_17327526.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
gi|393702363|gb|EJD64569.1| hypothetical protein HMPREF9156_01064 [Scardovia wiggsiae F0424]
Length = 894
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE +L+G++ EG +AAK L A GV L R + +++GKG
Sbjct: 15 LAQEEARALKHNYIGTEHLLLGLIREGEGVAAKALAAKGVELDAARSQIEEMIGKGS--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
SP H P T A++V++ ++ L+ G+S + LLLG+ E + G ++L +G
Sbjct: 72 ASPAGHIPFTPHARQVVELSLREALQLGHS-YIGTEHLLLGLIREGEGVGTQVLIKMG 128
>gi|354567441|ref|ZP_08986610.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
gi|353542713|gb|EHC12174.1| ATPase AAA-2 domain protein [Fischerella sp. JSC-11]
Length = 851
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 44 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 103
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L +G
Sbjct: 104 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENVGVDL 160
Query: 121 EKAK 124
K +
Sbjct: 161 SKVR 164
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSP 63
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+ + P
Sbjct: 123 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENVGVDLSKVRTQVIRMLGETAEVTQGGP 182
Query: 64 EH----PPLTEDAQRVIDWAVDHKLKS--GNSGEVTASDLLLGIWSETD 106
P L E + A+D KL G + E+ +LG ++ +
Sbjct: 183 SRGNKTPTLDEFGSNLTQMALDGKLDPVVGRAKEIERVIQILGRRTKNN 231
>gi|403382836|ref|ZP_10924893.1| protein ClpC [Paenibacillus sp. JC66]
Length = 807
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVEALIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPANFAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKEL--------ESLSSEPGSVDD 138
KA++ E +SS GS ++
Sbjct: 132 NKARQQVLQLLGSNEVVSSNHGSTNN 157
>gi|124026198|ref|YP_001015314.1| ClpC [Prochlorococcus marinus str. NATL1A]
gi|123961266|gb|ABM76049.1| ClpC [Prochlorococcus marinus str. NATL1A]
Length = 855
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSRVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + V+++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVVRMLGE 144
>gi|225175258|ref|ZP_03729254.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169434|gb|EEG78232.1| ATPase AAA-2 domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 818
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE ILMG++ EG +AAK L + G+ L VR E K++GKGD P+
Sbjct: 21 EAKRFNHSFVGTEHILMGLVREGEGIAAKVLLSLGMQLDSVRSEIEKLIGKGDQRSL-PQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
T A++VI+ A++ G++ V LLLG+ E + ++L +G +A+
Sbjct: 80 GVNYTPRAKKVIELAIEEGQNLGHN-YVGTEHLLLGLIREGEGIAAQVLTNMGVDLTRAR 138
Query: 125 ---------ELESLSSEPG 134
E E L EPG
Sbjct: 139 KSVLALLGDEDEPLPEEPG 157
>gi|383807762|ref|ZP_09963321.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
gi|383298505|gb|EIC91121.1| ATP-dependent protease, ATPase subunit [Candidatus Aquiluna sp.
IMCC13023]
Length = 825
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L A G+ L +VR++ I+G+G
Sbjct: 20 LAQEEAKLLNHNYIGTEHILLGLIHEGEGVAAKALEALGINLEQVREQVQDIIGQGQ--- 76
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
SP H P T A++V++ ++ L+ G+S + LLLG+ E + ++L LG
Sbjct: 77 QSPSGHIPFTPRAKKVLELSLREALQLGHS-YIGTEHLLLGLIREGEGVAAQVLTKLGAD 135
Query: 120 DEKAKE 125
K ++
Sbjct: 136 TNKVRQ 141
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE +L+G++ EG +AA+ L G KVR + ++++
Sbjct: 99 EALQLGHSYIGTEHLLLGLIREGEGVAAQVLTKLGADTNKVRQQVIQLL 147
>gi|33240557|ref|NP_875499.1| Clp protease ATP-binding subunit [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238085|gb|AAQ00152.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 856
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDSRVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|403743591|ref|ZP_10953143.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122621|gb|EJY56826.1| ATPase AAA-2 domain-containing protein [Alicyclobacillus hesperidum
URH17-3-68]
Length = 810
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L HP GTE IL+G++ EG +AA+ L GV KV+ E +I+GKG
Sbjct: 15 LAQEEATRLSHPGVGTEHILLGLVREGEGIAARALQMLGVQADKVQQEVERIIGKGQGQV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K N V +LLG+ E + ++LA + S
Sbjct: 75 SAMTYTP---RAKKVIELSIDEARKL-NHSYVGTEHILLGLIREGEGVAARVLANMNVSL 130
Query: 121 EKAKE 125
KA++
Sbjct: 131 NKARQ 135
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L V+L K R + ++++G
Sbjct: 93 EARKLNHSYVGTEHILLGLIREGEGVAARVLANMNVSLNKARQQVLQLLG 142
>gi|381184365|ref|ZP_09892990.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
gi|380315745|gb|EIA19239.1| ClpC ATPase [Listeriaceae bacterium TTU M1-001]
Length = 820
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G+G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISAEKVQQEVEGLIGQGEKTVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGVSLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQVLQLLGGGD 146
>gi|159903639|ref|YP_001550983.1| ClpC [Prochlorococcus marinus str. MIT 9211]
gi|159888815|gb|ABX09029.1| ClpC [Prochlorococcus marinus str. MIT 9211]
Length = 859
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSVGVNLKDSRVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE 144
>gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33634221|emb|CAE19547.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 842
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L G+ L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGIDLTKVRTQVIRMLGE 144
>gi|123966412|ref|YP_001011493.1| ClpC [Prochlorococcus marinus str. MIT 9515]
gi|123200778|gb|ABM72386.1| ClpC [Prochlorococcus marinus str. MIT 9515]
Length = 843
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L G+ L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGIDLTKVRTQVIRMLGE 144
>gi|456062009|ref|YP_007476253.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
gi|449327196|gb|AGE93752.1| Clp protease ATP binding subunit (chloroplast) [Pavlova lutheri]
Length = 845
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R+L H GTE IL+G++ EGT LA K L + GVTL R E K++G+G F
Sbjct: 15 LAQEESRRLGHNFVGTEQILLGLIGEGTGLAFKVLNSMGVTLKDARIEVEKVIGRGTGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIRENEGVATRVLENLG 128
>gi|409991063|ref|ZP_11274359.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567331|dbj|BAI89603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409938081|gb|EKN79449.1| ATPase [Arthrospira platensis str. Paraca]
Length = 824
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+GI+ EGTS+AAK L + L R E I+G+G F
Sbjct: 15 LSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTRREIESIIGRGSGFM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T A+RV + A+ + GN+ + +LLG+ + + K+L LG
Sbjct: 75 --PPEIPFTPRAKRVFEAAMKEARQLGNN-YIAPEHILLGLLQDEEGVAAKVLENLG 128
>gi|299821023|ref|ZP_07052911.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
gi|299816688|gb|EFI83924.1| ATPase with chaperone activity, ATP-binding subunit [Listeria grayi
DSM 20601]
Length = 821
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +LKH GTE IL+G++ EG +AAK L+ V+ KV+ E ++G+GD
Sbjct: 16 LSQEEAIRLKHSNLGTEHILLGLVREGEGIAAKALYELEVSSEKVQQEVEALIGEGDKTV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ ++ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S
Sbjct: 76 TTIQYTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G D
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGVSLNKARQQVLQLLGSSD 146
>gi|149071968|ref|YP_001293474.1| Clp protease ATP binding subunit [Rhodomonas salina]
gi|134302919|gb|ABO70723.1| Clp protease ATP binding subunit [Rhodomonas salina]
Length = 819
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLALDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLALDLSKVRTQVIRLLG 143
>gi|428774264|ref|YP_007166052.1| ATPase [Cyanobacterium stanieri PCC 7202]
gi|428688543|gb|AFZ48403.1| ATPase AAA-2 domain protein [Cyanobacterium stanieri PCC 7202]
Length = 824
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKPMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLG 128
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLGKVRTQVIRMLGE 144
>gi|428203900|ref|YP_007082489.1| chaperone ATPase [Pleurocapsa sp. PCC 7327]
gi|427981332|gb|AFY78932.1| ATPase with chaperone activity, ATP-binding subunit [Pleurocapsa
sp. PCC 7327]
Length = 821
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK--------ELESLSSEPGS 135
K + E +S+ PG+
Sbjct: 132 AKVRTQVIRMLGETAEVSTTPGA 154
>gi|336112769|ref|YP_004567536.1| ATPase AAA-2 domain-containing protein [Bacillus coagulans 2-6]
gi|335366199|gb|AEH52150.1| ATPase AAA-2 domain protein [Bacillus coagulans 2-6]
Length = 816
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +LKH GTE IL+G++ EG +AAK L+ G++ K+++E ++G G
Sbjct: 16 LSQEEAIRLKHNNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQEEVETLIGNGQEIS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLTNLGVSL 131
Query: 121 EKAKE--LESLSSEPGSV 136
KA++ L+ L + SV
Sbjct: 132 NKARQQVLQLLGNSEASV 149
>gi|11467609|ref|NP_050661.1| Clp protease ATP binding subunit [Guillardia theta]
gi|5921798|sp|O78410.1|CLPC_GUITH RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|3602934|gb|AAC35595.1| Clp protease ATP binding subunit (chloroplast) [Guillardia theta]
Length = 819
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLALDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLALDLTKVRTQVIRLLG 143
>gi|30468134|ref|NP_849021.1| Clp protease ATP binding subunit [Cyanidioschyzon merolae strain
10D]
gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit (chloroplast)
[Cyanidioschyzon merolae strain 10D]
Length = 821
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT LAA+ L GV L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGLAARALKTLGVDLKEARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDH-KLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ ++D ++ S N + LLLG+ E + ++L +LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLDEARILSHNY--IGTEHLLLGLIREGEGVAARVLESLG 128
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVR-------DESVKIVGKGD 57
EAR L H GTE +L+G++ EG +AA+ L + GV L +R DE+ ++V G
Sbjct: 94 EARILSHNYIGTEHLLLGLIREGEGVAARVLESLGVDLATLRSLVLRMLDETSEVVIGGG 153
Query: 58 F 58
+
Sbjct: 154 Y 154
>gi|347751623|ref|YP_004859188.1| ATPase AAA [Bacillus coagulans 36D1]
gi|347584141|gb|AEP00408.1| ATPase AAA-2 domain protein [Bacillus coagulans 36D1]
Length = 816
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +LKH GTE IL+G++ EG +AAK L+ G++ K+++E ++G G
Sbjct: 16 LSQEEAIRLKHNNIGTEHILLGLVREGEGIAAKALYGLGLSAEKIQEEVETLIGNGQEIS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLTNLGVSL 131
Query: 121 EKAKE--LESLSSEPGSV 136
KA++ L+ L + SV
Sbjct: 132 NKARQQVLQLLGNSEASV 149
>gi|149275671|gb|ABR23161.1| ATP-dependent Clp protease regulatory subunit ClpC [Ulva fasciata]
Length = 904
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R+L H GTE IL+G++ E T +AAK L GV L + R E KI+G+G F
Sbjct: 84 LAQEESRRLGHNFVGTEQILLGLIGEATGIAAKVLKQMGVNLKEARTEVEKIIGRGSGFV 143
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G+S + +LLG+ E + ++L ++G
Sbjct: 144 --AVEIPFTPRAKRVLELSLEEARQLGHS-YIGTEHILLGLLREGEGIAARVLESMGADS 200
Query: 121 EKAK 124
EK +
Sbjct: 201 EKIR 204
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE IL+G+L EG +AA+ L + G K+R + V++VG+
Sbjct: 163 EARQLGHSYIGTEHILLGLLREGEGIAARVLESMGADSEKIRHQVVRMVGE 213
>gi|221633020|ref|YP_002522245.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
gi|221155441|gb|ACM04568.1| ClpC ATPase [Thermomicrobium roseum DSM 5159]
Length = 817
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+ H GTE +L+G++ EG +AA+ L + GV L KVR I+G+G+
Sbjct: 18 LAQEEARRFNHNYIGTEHLLLGLVREGEGVAARVLQSMGVQLPKVRSAVEFIIGRGESTV 77
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT A++VI++AVD + G+ + LLLG+ E + +L +LG +
Sbjct: 78 VG--EIGLTPRARKVIEYAVDEARRLGHH-YIGTEHLLLGLVREGEGIAAGVLESLGVNL 134
Query: 121 EKAKE 125
EK ++
Sbjct: 135 EKVRQ 139
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EAR+L H GTE +L+G++ EG +AA L + GV L KVR + ++++ +G +
Sbjct: 97 EARRLGHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRQQVLQVLAQGTAY 151
>gi|357039780|ref|ZP_09101572.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357586|gb|EHG05359.1| ATPase AAA-2 domain protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 815
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ HP GTE IL+G++ EG +AAK L + GV KVR + +G+G+
Sbjct: 16 LAQEEAKRFNHPYVGTEHILLGLISEGEGVAAKALASLGVQADKVRAMVEQSIGQGE--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+P LT +RV++ +VD + G + V LLLG+ E + ++L AL +
Sbjct: 73 GTPREMALTPRVKRVLELSVDEARRMG-TNYVGTEHLLLGLIREGEGVAAQVLGALDVNQ 131
Query: 121 EKAKEL 126
E+ +++
Sbjct: 132 ERVRQI 137
>gi|357420234|ref|YP_004933226.1| ATPase AAA [Thermovirga lienii DSM 17291]
gi|355397700|gb|AER67129.1| ATPase AAA-2 domain protein [Thermovirga lienii DSM 17291]
Length = 820
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K+ H GTE IL+G+L EG +AA+ L + GV L VR ++VG+G+ P
Sbjct: 19 EALKMGHDVIGTEHILLGLLAEGEGIAARVLMSFGVELDDVRTRIEQVVGRGE-PKAKPI 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PL+ A+RV+D A+ G V +LLG+ SE + +IL +LG +K +
Sbjct: 78 DLPLSPRAKRVLDLAMREARNMG-VNYVGTEHMLLGLISEGEGIASQILQSLGLDLQKVR 136
>gi|386712438|ref|YP_006178760.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
gi|384071993|emb|CCG43483.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
halophilus DSM 2266]
Length = 819
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E K++GKG+
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKSLTALGLEASKIQQEVEKLIGKGEKVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHSY-VGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNE 146
>gi|289433587|ref|YP_003463459.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289169831|emb|CBH26369.1| ClpC ATPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 820
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ GV+ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGVSSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|194477237|ref|YP_002049416.1| endopeptidase Clp ATP-binding chain C [Paulinella chromatophora]
gi|171192244|gb|ACB43206.1| endopeptidase Clp ATP-binding chain C [Paulinella chromatophora]
Length = 993
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGMAAKMLRSMGLNLKETRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + + N+ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLE-EARQLNNNYIGTEHLLLGLTQEGEGVAARVLENLG 128
>gi|347547703|ref|YP_004854031.1| putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|346980774|emb|CBW84681.1| Putative endopeptidase Clp ATP-binding chain C [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 820
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISAEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|255026741|ref|ZP_05298727.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J2-003]
Length = 585
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|433461663|ref|ZP_20419269.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
gi|432189835|gb|ELK46900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Halobacillus
sp. BAB-2008]
Length = 819
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E K++GKG+
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLVSEGEGIAAKALTALGLESSKIQQEVEKLIGKGEKVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNE 146
>gi|310644235|ref|YP_003948994.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|309249186|gb|ADO58753.1| ATPase AAA-2 domain-containing protein [Paenibacillus polymyxa SC2]
gi|392304928|emb|CCI71291.1| ATP-dependent Clp protease ATP-binding subunit clpC [Paenibacillus
polymyxa M1]
Length = 814
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|374320677|ref|YP_005073806.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
gi|357199686|gb|AET57583.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
terrae HPL-003]
Length = 814
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|116871616|ref|YP_848397.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116740494|emb|CAK19614.1| ClpB ATPase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 820
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|308071007|ref|YP_003872612.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
gi|305860286|gb|ADM72074.1| Negative regulator of genetic competence clpC/mecB [Paenibacillus
polymyxa E681]
Length = 814
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|16799341|ref|NP_469609.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|423099292|ref|ZP_17086999.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
gi|16412693|emb|CAC95497.1| endopeptidase Clp ATP-binding chain C [Listeria innocua Clip11262]
gi|370794190|gb|EHN61972.1| negative regulator of genetic competence ClpC/MecB [Listeria
innocua ATCC 33091]
Length = 820
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|375310836|ref|ZP_09776101.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
gi|375077204|gb|EHS55447.1| ATPase aaa-2 domain-containing protein [Paenibacillus sp. Aloe-11]
Length = 814
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|304405673|ref|ZP_07387332.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304345712|gb|EFM11547.1| ATPase AAA-2 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 822
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVEALIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|390456410|ref|ZP_10241938.1| ATPase AAA [Paenibacillus peoriae KCTC 3763]
Length = 814
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|251799676|ref|YP_003014407.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247547302|gb|ACT04321.1| ATPase AAA-2 domain protein [Paenibacillus sp. JDR-2]
Length = 817
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVEALIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKEL--------ESLSSEPGS 135
KA++ E++SS GS
Sbjct: 132 NKARQQVLQLLGSSEAVSSSHGS 154
>gi|422808348|ref|ZP_16856759.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
gi|378753382|gb|EHY63966.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes FSL J1-208]
Length = 820
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|254853501|ref|ZP_05242849.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
gi|258606873|gb|EEW19481.1| ClpC ATPase [Listeria monocytogenes FSL R2-503]
Length = 821
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|46906465|ref|YP_012854.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47093952|ref|ZP_00231688.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|226222861|ref|YP_002756968.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825724|ref|ZP_05230725.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|254932450|ref|ZP_05265809.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|300764643|ref|ZP_07074635.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|386730997|ref|YP_006204493.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404279782|ref|YP_006680680.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404285599|ref|YP_006692185.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|405748575|ref|YP_006672041.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|405751449|ref|YP_006674914.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|405754317|ref|YP_006677781.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|406703005|ref|YP_006753359.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|417314282|ref|ZP_12100983.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|424713097|ref|YP_007013812.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
gi|424821963|ref|ZP_18246976.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|46879729|gb|AAT03031.1| ClpC ATPase [Listeria monocytogenes serotype 4b str. F2365]
gi|47017673|gb|EAL08470.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 4b H7858]
gi|225875323|emb|CAS04020.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293584007|gb|EFF96039.1| ClpC ATPase [Listeria monocytogenes HPB2262]
gi|293594968|gb|EFG02729.1| ClpC ATPase [Listeria monocytogenes FSL J1-194]
gi|300514750|gb|EFK41805.1| ClpC ATPase [Listeria monocytogenes FSL N1-017]
gi|328467843|gb|EGF38883.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J1816]
gi|332310643|gb|EGJ23738.1| Chaperone protein ClpB [Listeria monocytogenes str. Scott A]
gi|384389755|gb|AFH78825.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
07PF0776]
gi|404217775|emb|CBY69139.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes ATCC 19117]
gi|404220649|emb|CBY72012.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2378]
gi|404223517|emb|CBY74879.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2540]
gi|404226417|emb|CBY47822.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2755]
gi|404244528|emb|CBY02753.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360035|emb|CBY66308.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L312]
gi|424012281|emb|CCO62821.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes serotype 4b str. LL195]
Length = 820
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|329929240|ref|ZP_08282999.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
gi|328936799|gb|EGG33238.1| negative regulator of genetic competence ClpC/MecB [Paenibacillus
sp. HGF5]
Length = 818
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|255520324|ref|ZP_05387561.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes FSL
J1-175]
Length = 819
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|261409551|ref|YP_003245792.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286014|gb|ACX67985.1| ATPase AAA-2 domain protein [Paenibacillus sp. Y412MC10]
Length = 818
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|354585457|ref|ZP_09004344.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
gi|353188726|gb|EHB54246.1| ATPase AAA-2 domain protein [Paenibacillus lactis 154]
Length = 818
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|422408257|ref|ZP_16485218.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
gi|313611199|gb|EFR86009.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes FSL F2-208]
Length = 820
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|217965681|ref|YP_002351359.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290892627|ref|ZP_06555620.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|386006961|ref|YP_005925239.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|386025542|ref|YP_005946318.1| Clp endopeptidase ATP-binding subunit [Listeria monocytogenes M7]
gi|404406685|ref|YP_006689400.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
gi|217334951|gb|ACK40745.1| negative regulator of genetic competence ClpC/mecB [Listeria
monocytogenes HCC23]
gi|290557936|gb|EFD91457.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
J2-071]
gi|307569771|emb|CAR82950.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes L99]
gi|336022123|gb|AEH91260.1| Clp endopeptidase ATP-binding subunit; putative ClpB [Listeria
monocytogenes M7]
gi|404240834|emb|CBY62234.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2376]
Length = 820
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|16802278|ref|NP_463763.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47097423|ref|ZP_00234971.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|254828692|ref|ZP_05233379.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|254913462|ref|ZP_05263474.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|254937957|ref|ZP_05269654.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284800527|ref|YP_003412392.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284993713|ref|YP_003415481.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|386042568|ref|YP_005961373.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|386045869|ref|YP_005964201.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|386049161|ref|YP_005967152.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|386052509|ref|YP_005970067.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404282664|ref|YP_006683561.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404409465|ref|YP_006695053.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404412333|ref|YP_006697920.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|405757220|ref|YP_006686496.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|16409597|emb|CAD00759.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
EGD-e]
gi|47014200|gb|EAL05185.1| negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes str. 1/2a F6854]
gi|258601096|gb|EEW14421.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
N3-165]
gi|258610567|gb|EEW23175.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
F6900]
gi|284056089|gb|ADB67030.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5578]
gi|284059180|gb|ADB70119.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
08-5923]
gi|293591469|gb|EFF99803.1| endopeptidase Clp ATP-binding chain C [Listeria monocytogenes
J2818]
gi|345532860|gb|AEO02301.1| Clp protease ATP binding subunit [Listeria monocytogenes J0161]
gi|345535802|gb|AEO05242.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Listeria
monocytogenes 10403S]
gi|346423007|gb|AEO24532.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes FSL
R2-561]
gi|346645160|gb|AEO37785.1| endopeptidase subunit Clp ATP-binding C [Listeria monocytogenes
Finland 1998]
gi|404229291|emb|CBY50695.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC5850]
gi|404232166|emb|CBY53569.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2372]
gi|404235102|emb|CBY56504.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC2479]
gi|404238032|emb|CBY59433.1| ATP-dependent Clp protease ATP-binding subunit [Listeria
monocytogenes SLCC7179]
gi|441469781|emb|CCQ19536.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes]
gi|441472917|emb|CCQ22671.1| Negative regulator of genetic competence ClpC/MecB [Listeria
monocytogenes N53-1]
Length = 820
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|86608097|ref|YP_476859.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556639|gb|ABD01596.1| Clp protease, ATP-binding subunit ClpC [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 824
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|315649734|ref|ZP_07902818.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
gi|315274922|gb|EFU38298.1| ATPase AAA-2 domain protein [Paenibacillus vortex V453]
Length = 818
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGDGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|291533975|emb|CBL07088.1| ATPases with chaperone activity, ATP-binding subunit [Megamonas
hypermegale ART12/1]
Length = 848
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ LKH GTE IL+G+L EGT++AAK L + G+ L+ VR ++V K DF
Sbjct: 15 LAQYEAKHLKHAHVGTEHILLGLLHEGTNVAAKALSSIGIDLYTVRQRVHELVEKEDFDD 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
E + A+ ++++AV+ G+ + +LLGI +T+S +IL +L
Sbjct: 75 LETEEIGYSPKAKTIMEYAVEQAQALGHD-YIGTEHILLGIIYDTESIACEILISL 129
>gi|1314297|gb|AAC44446.1| ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ G++ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L+ LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLSNLGISLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G GD
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGD 146
>gi|376001877|ref|ZP_09779731.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|423062254|ref|ZP_17051044.1| ATPase AAA-2 [Arthrospira platensis C1]
gi|375329788|emb|CCE15484.1| ATP-dependent Clp protease regulatory subunit [Arthrospira sp. PCC
8005]
gi|406716162|gb|EKD11313.1| ATPase AAA-2 [Arthrospira platensis C1]
Length = 823
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|409992273|ref|ZP_11275473.1| ATPase [Arthrospira platensis str. Paraca]
gi|291567174|dbj|BAI89446.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arthrospira
platensis NIES-39]
gi|409936864|gb|EKN78328.1| ATPase [Arthrospira platensis str. Paraca]
Length = 823
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|205372096|ref|ZP_03224913.1| class III stress response-related ATPase [Bacillus coahuilensis
m4-4]
Length = 816
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G++ K++ E ++GKG
Sbjct: 16 LAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKALYALGLSSEKIQKEVETLIGKGKETT 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QNIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
>gi|75910545|ref|YP_324841.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
gi|75704270|gb|ABA23946.1| UvrB/UvrC protein [Anabaena variabilis ATCC 29413]
Length = 814
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTEMGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + GN+ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHNLGNN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|33863332|ref|NP_894892.1| protein ClpC [Prochlorococcus marinus str. MIT 9313]
gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313]
Length = 859
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|17229455|ref|NP_486003.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17131053|dbj|BAB73662.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
Length = 814
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTEMGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + GN+ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHNLGNN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|22297851|ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1]
Length = 824
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVR 135
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLSKVRTQVIRMLGE 144
>gi|423062414|ref|ZP_17051204.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
gi|406716322|gb|EKD11473.1| ATPase AAA-2 domain protein [Arthrospira platensis C1]
Length = 824
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+GI+ EGTS+AAK L + L R E I+G+G F
Sbjct: 15 LSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTRREIESIIGRGSGFM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T A+RV + A+ + GN+ + +LLG+ + + K+L G
Sbjct: 75 --PPEIPFTPRAKRVFESAMKEARQLGNN-YIAPEHILLGLLQDEEGVAAKVLENFG 128
>gi|326327732|pdb|2Y1R|A Chain A, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327733|pdb|2Y1R|B Chain B, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327734|pdb|2Y1R|C Chain C, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327735|pdb|2Y1R|D Chain D, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327736|pdb|2Y1R|E Chain E, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327737|pdb|2Y1R|F Chain F, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327738|pdb|2Y1R|G Chain G, Structure Of Meca121 & Clpc N-Domain Complex
gi|326327739|pdb|2Y1R|H Chain H, Structure Of Meca121 & Clpc N-Domain Complex
Length = 149
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G +
Sbjct: 20 EALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 135
Query: 125 E--LESL-SSEPGS 135
+ L+ L S+E GS
Sbjct: 136 QQVLQLLGSNETGS 149
>gi|124022698|ref|YP_001017005.1| protein ClpC [Prochlorococcus marinus str. MIT 9303]
gi|123962984|gb|ABM77740.1| ClpC [Prochlorococcus marinus str. MIT 9303]
Length = 859
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMSVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 AKVR 135
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L GV L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLAKVRTQVIRMLGE 144
>gi|425736428|ref|ZP_18854733.1| ATPase [Brevibacterium casei S18]
gi|425478261|gb|EKU45459.1| ATPase [Brevibacterium casei S18]
Length = 845
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ LKH GTE IL+G++ EG LAAK L ++L +VRD+ +I+G+G
Sbjct: 15 LAQEEAKLLKHNYIGTEHILLGLIHEGEGLAAKALEGMDISLEQVRDQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHS-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR E +K++
Sbjct: 94 EALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVIKLL 142
>gi|253577148|ref|ZP_04854468.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843392|gb|EES71420.1| ATPase AAA-2 domain-containing protein [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 814
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE +L+G++ EG +AAK L G+ L K++DE ++G+G
Sbjct: 16 LAQEEAVRLGHNNIGTEHVLLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 EQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLG 143
>gi|260906427|ref|ZP_05914749.1| ATPase [Brevibacterium linens BL2]
Length = 850
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ LKH GTE IL+G++ EG LAAK L ++L +VRD+ +I+G+G
Sbjct: 15 LAQEEAKLLKHNYIGTEHILLGLIHEGEGLAAKALEGMDISLEQVRDQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHS-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR E +K++
Sbjct: 94 EALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVIKLL 142
>gi|365157357|ref|ZP_09353630.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
gi|363625258|gb|EHL76300.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
Length = 811
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+ G++ K+++E ++GKG
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLSPEKIQNEVENLIGKGQGVA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L G++L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLGSNE 146
>gi|229816837|ref|ZP_04447119.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785853|gb|EEP21967.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 881
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + ++++GKG+
Sbjct: 15 LAQEEARSLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELEATRKQVIEMIGKGN--A 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
S H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 73 SSNGHIPFTSHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|295702321|ref|YP_003595396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
gi|294799980|gb|ADF37046.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium DSM 319]
Length = 813
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+GI+ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQKEVEALIGRGQELT 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + + ++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLHLLGSNE 146
>gi|384049297|ref|YP_005497314.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
gi|345446988|gb|AEN92005.1| Class III stress response ATPase, ClpC [Bacillus megaterium
WSH-002]
Length = 813
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+GI+ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQKEVEALIGRGQELT 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + + ++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLHLLGSNE 146
>gi|119025591|ref|YP_909436.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765175|dbj|BAF39354.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium adolescentis ATCC 15703]
Length = 864
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ASPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|294496954|ref|YP_003560654.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
gi|294346891|gb|ADE67220.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
megaterium QM B1551]
Length = 812
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+GI+ EG +AAK L A G++ K++ E ++G+G
Sbjct: 15 LAQEEALRLGHNNIGTEHILLGIVREGEGIAAKALSALGLSTEKIQKEVEALIGRGQELT 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 75 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 130
Query: 121 EKAKE 125
KA++
Sbjct: 131 NKARQ 135
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + + ++G +
Sbjct: 93 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLHLLGSNE 145
>gi|428300697|ref|YP_007139003.1| ATPase [Calothrix sp. PCC 6303]
gi|428237241|gb|AFZ03031.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 6303]
Length = 817
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EG +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGNGVAAKVLVDLGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P P T + + + A GN+ ++ LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQAFKEARSLGNN-YISTEHLLLGLTEAGEGVAAKVLQNLGI 129
>gi|383809434|ref|ZP_09964954.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
gi|383447786|gb|EID50763.1| ATP-dependent Clp protease ATP-binding subunit family protein
[Rothia aeria F0474]
Length = 856
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AA+ L + G+TL VR++ I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLVHEGEGIAARALESLGITLNSVREQVQDIIGPG---A 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ ++ N G + +LLG+ + +++LA LG
Sbjct: 72 NAPSGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRANEGVANQVLAKLGVE 130
Query: 120 DEKAKE--LESLSSEPGSVD 137
++ ++ +S PG+ D
Sbjct: 131 PAAVRQAVMDLISGYPGNGD 150
>gi|154487051|ref|ZP_02028458.1| hypothetical protein BIFADO_00889 [Bifidobacterium adolescentis
L2-32]
gi|154084914|gb|EDN83959.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium adolescentis L2-32]
Length = 864
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ASPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|254527057|ref|ZP_05139109.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
gi|221538481|gb|EEE40934.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
Length = 842
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLNIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGE 144
>gi|260893780|ref|YP_003239877.1| ATPase AAA-2 domain-containing protein [Ammonifex degensii KC4]
gi|260865921|gb|ACX53027.1| ATPase AAA-2 domain protein [Ammonifex degensii KC4]
Length = 812
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR++ +P GTE IL+G+L EG +AAK L G++ VR++ +IV +G+
Sbjct: 15 LAQEEARRMNYPFVGTEHILLGLLREGEGVAAKVLQNLGISADAVREKVEQIVERGEEPV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG--F 118
LT A+RV++ AVD + G++ V LLLG+ E + ++L G
Sbjct: 75 LH--EVTLTPRAKRVLELAVDEARQLGHN-YVGTEHLLLGLIREGEGVAAQVLTMFGADL 131
Query: 119 SDEKAKELESLSS-EPGS 135
+A+ LE LS+ PG+
Sbjct: 132 DKVRAQVLEMLSTGTPGA 149
>gi|157413559|ref|YP_001484425.1| ClpC [Prochlorococcus marinus str. MIT 9215]
gi|157388134|gb|ABV50839.1| ClpC [Prochlorococcus marinus str. MIT 9215]
Length = 842
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLNIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGE 144
>gi|283794929|ref|YP_003359282.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
gi|253981901|gb|ACT46818.1| Clp protease ATP binding subunit [Cryptomonas paramecium]
Length = 817
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR++ H GTE +L+GI+VEGT +AAK L + G+T+ R E K+VG+G
Sbjct: 15 LAQEEARRMNHNFVGTEQLLLGIIVEGTGVAAKVLKSMGITIKDARAEVEKLVGRGA--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
S P T A++V++ A++ G++ + +LLG+ + D ++L +L
Sbjct: 73 MSAVDIPFTPRAKKVLESALEESRMLGHN-YIGTEHILLGLLEDEDGVATQVLESL 127
>gi|126696533|ref|YP_001091419.1| ClpC [Prochlorococcus marinus str. MIT 9301]
gi|126543576|gb|ABO17818.1| ClpC [Prochlorococcus marinus str. MIT 9301]
Length = 841
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLNIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGE 144
>gi|428207100|ref|YP_007091453.1| ATPase [Chroococcidiopsis thermalis PCC 7203]
gi|428009021|gb|AFY87584.1| ATPase AAA-2 domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 828
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G+
Sbjct: 15 LAQEEARRLGHNLVGTEQILLGLIGEGTGIAAKVLTELGVTLQAARAEVEKIIGRGNRPA 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P T +RV + A G++ + +LLG+ E + K+L LG
Sbjct: 75 MA--EIPFTPKVKRVFEQAFTEARTLGHN-YIGPEHVLLGLLQEGEGVAGKVLQNLGVDL 131
Query: 121 EKAK 124
++A+
Sbjct: 132 DEAR 135
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR L H G E +L+G+L EG +A K L GV L + R +++ +G+
Sbjct: 94 EARTLGHNYIGPEHVLLGLLQEGEGVAGKVLQNLGVDLDEARGNTIRKLGE 144
>gi|123968727|ref|YP_001009585.1| ClpC [Prochlorococcus marinus str. AS9601]
gi|123198837|gb|ABM70478.1| ClpC [Prochlorococcus marinus str. AS9601]
Length = 842
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLNIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLNIDLTKVRTQVIRMLGE 144
>gi|78779482|ref|YP_397594.1| Clp protease ATP-binding subunit [Prochlorococcus marinus str. MIT
9312]
gi|78712981|gb|ABB50158.1| ATPase [Prochlorococcus marinus str. MIT 9312]
Length = 842
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSLGVNLKDSRIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENLSIDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 TKVR 135
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L + L KVR + ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLSIDLTKVRTQVIRMLGE 144
>gi|228311787|pdb|2K77|A Chain A, Nmr Solution Structure Of The Bacillus Subtilis Clpc N-
Domain
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G +
Sbjct: 21 EALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIH 80
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 81 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 136
Query: 125 E 125
+
Sbjct: 137 Q 137
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 144
>gi|227876310|ref|ZP_03994423.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269976114|ref|ZP_06183113.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307701521|ref|ZP_07638539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
gi|227843083|gb|EEJ53279.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
mulieris ATCC 35243]
gi|269935707|gb|EEZ92242.1| negative regulator of genetic competence ClpC/MecB [Mobiluncus
mulieris 28-1]
gi|307613313|gb|EFN92564.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris FB024-16]
Length = 915
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L GTE +L+G++ EG +AA+ L G++L VR + ++I+G+G+ P
Sbjct: 19 EARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGE----QPT 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ G++ + +LLG+ E D ++L LG
Sbjct: 75 TGHIPFTPRARKVLEYSMREALQLGHN-YIGTEHILLGLLREGDGVASQVLVNLG 128
>gi|420237566|ref|ZP_14742031.1| Clp protease [Parascardovia denticolens IPLA 20019]
gi|391879188|gb|EIT87700.1| Clp protease [Parascardovia denticolens IPLA 20019]
Length = 862
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE +L+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARALKHNYIGTEHLLLGLIREGEGVAAKSLASKGVELDAARQQVEEMIGKGS--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +G
Sbjct: 72 AAPTGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLVKMG 128
>gi|306817201|ref|ZP_07450948.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
gi|304650003|gb|EFM47281.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
mulieris ATCC 35239]
Length = 915
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L GTE +L+G++ EG +AA+ L G++L VR + ++I+G+G+ P
Sbjct: 19 EARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGE----QPT 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ G++ + +LLG+ E D ++L LG
Sbjct: 75 TGHIPFTPRARKVLEYSMREALQLGHN-YIGTEHILLGLLREGDGVASQVLVNLG 128
>gi|294791481|ref|ZP_06756638.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
gi|294457952|gb|EFG26306.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Scardovia
inopinata F0304]
Length = 882
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE +L+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLKHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRQQVEEMIGKGS--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +G
Sbjct: 72 AAPTGHIPFTPHARQVLELSLREALQLGHS-YIGTEHVLLGLIREGEGVGTQVLVKMG 128
>gi|377574374|ref|ZP_09803404.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
gi|377536930|dbj|GAB48569.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobilicoccus
pelagius NBRC 104925]
Length = 880
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+GKG
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVEEIIGKGQ--Q 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
S H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 73 ASSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLQKLG 128
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVIQLL 142
>gi|229917386|ref|YP_002886032.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229468815|gb|ACQ70587.1| ATPase AAA-2 domain protein [Exiguobacterium sp. AT1b]
Length = 811
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 14/145 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G+T K++ E ++G+G
Sbjct: 16 LAQEEAVRLGHHNIGTEHILLGLVREGEGIAAKALFALGLTSEKIQQEVESLIGRGSENG 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 STIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAK----------ELESLSSEPGS 135
KA+ E S +S+PG+
Sbjct: 132 TKARQQVLQLLGNTESSSNASQPGA 156
>gi|310287202|ref|YP_003938460.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|311064064|ref|YP_003970789.1| genetic competence regulator ClpC [Bifidobacterium bifidum PRL2010]
gi|421734040|ref|ZP_16173129.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|421737399|ref|ZP_16176009.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
gi|309251138|gb|ADO52886.1| ATP-dependent clp protease [Bifidobacterium bifidum S17]
gi|310866383|gb|ADP35752.1| ClpC Negative regulator of genetic competence [Bifidobacterium
bifidum PRL2010]
gi|407078036|gb|EKE50853.1| genetic competence regulator ClpC [Bifidobacterium bifidum LMG
13195]
gi|407295316|gb|EKF15088.1| genetic competence regulator ClpC [Bifidobacterium bifidum IPLA
20015]
Length = 858
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|390936556|ref|YP_006394115.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
gi|389890169|gb|AFL04236.1| putative ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium bifidum BGN4]
Length = 858
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|313139902|ref|ZP_07802095.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
gi|313132412|gb|EFR50029.1| ClpC [Bifidobacterium bifidum NCIMB 41171]
Length = 867
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 24 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 80
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 81 AAPNGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 136
>gi|226309775|ref|YP_002769669.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
gi|226092723|dbj|BAH41165.1| negative regulator of genetic competence [Brevibacillus brevis NBRC
100599]
Length = 815
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ EG +AAK L + G+ L K++ E ++G+G S
Sbjct: 19 EAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQSEVESLIGRGTEQSGSNY 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI+ ++D K G++ V +LLG+ E + +I+ LG S KA+
Sbjct: 79 TPNYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGIAARIMNNLGVSLNKAR 137
Query: 125 E 125
+
Sbjct: 138 Q 138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EARKL H GTE IL+G++ EG +AA+ + GV+L K R + ++++G +
Sbjct: 96 EARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVLQLLGSSEMM 150
>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. BC25]
Length = 816
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ EG +AAK L + G+ L K++ E ++G+G S
Sbjct: 20 EAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQSEVESLIGRGTEQSGSNY 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI+ ++D K G++ V +LLG+ E + +I+ LG S KA+
Sbjct: 80 TPNYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGIAARIMNNLGVSLNKAR 138
Query: 125 E 125
+
Sbjct: 139 Q 139
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EARKL H GTE IL+G++ EG +AA+ + GV+L K R + ++++G +
Sbjct: 97 EARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVLQLLGSSEMM 151
>gi|399055773|ref|ZP_10743423.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|433543324|ref|ZP_20499734.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
gi|398046636|gb|EJL39230.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
sp. CF112]
gi|432185453|gb|ELK42944.1| negative regulator of genetic competence [Brevibacillus agri
BAB-2500]
Length = 816
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ EG +AAK L + G+ L K++ E ++G+G S
Sbjct: 20 EAVRLGHKDIGTEHVLLGLIREGEGIAAKALQSLGLGLDKIQSEVESLIGRGTEQSGSNY 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI+ ++D K G++ V +LLG+ E + +I+ LG S KA+
Sbjct: 80 TPNYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGIAARIMNNLGVSLNKAR 138
Query: 125 E 125
+
Sbjct: 139 Q 139
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EARKL H GTE IL+G++ EG +AA+ + GV+L K R + ++++G +
Sbjct: 97 EARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGVSLNKARQQVLQLLGSSEMM 151
>gi|212716932|ref|ZP_03325060.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660217|gb|EEB20792.1| hypothetical protein BIFCAT_01876 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 858
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ATPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|294787498|ref|ZP_06752751.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315226925|ref|ZP_07868713.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|294484854|gb|EFG32489.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Parascardovia
denticolens F0305]
gi|315121057|gb|EFT84189.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 862
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE +L+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARALKHNYIGTEHLLLGLIREGEGVAAKSLASKGVELDAARQQVEEMIGKGS--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +G
Sbjct: 72 AAPTGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLVKMG 128
>gi|227834051|ref|YP_002835758.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|262183463|ref|ZP_06042884.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
gi|227455067|gb|ACP33820.1| ATP-dependent Clp protease [Corynebacterium aurimucosum ATCC
700975]
Length = 925
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLTKLG 128
>gi|225352751|ref|ZP_03743774.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156358|gb|EEG69927.1| hypothetical protein BIFPSEUDO_04381 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 861
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKALASKGVTLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ATPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|255325858|ref|ZP_05366950.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
gi|255297070|gb|EET76395.1| negative regulator of genetic competence ClpC/mecB [Corynebacterium
tuberculostearicum SK141]
Length = 922
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLTKLG 128
>gi|333980531|ref|YP_004518476.1| ATPase AAA [Desulfotomaculum kuznetsovii DSM 6115]
gi|333824012|gb|AEG16675.1| ATPase AAA-2 domain protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 828
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L +P GTE +L+G++ EG +AAK L + G+ KVR ++V K
Sbjct: 16 LAQEEARRLNYPYVGTEHLLLGLIREGEGVAAKTLASLGIDADKVRATVEQMVEKVSGPM 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P+ PLT A+RV++ AVD + G++ V LLLG+ E + + LA+LG
Sbjct: 76 --PQEIPLTPRAKRVLELAVDEARRMGHN-YVGTEHLLLGLIREGEGVAARALASLGADL 132
Query: 121 EKAKEL 126
K + +
Sbjct: 133 NKVRSV 138
>gi|171743328|ref|ZP_02919135.1| hypothetical protein BIFDEN_02459 [Bifidobacterium dentium ATCC
27678]
gi|171278942|gb|EDT46603.1| ATPase family associated with various cellular activities (AAA)
[Bifidobacterium dentium ATCC 27678]
Length = 863
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV+L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ASPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|283455701|ref|YP_003360265.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
dentium Bd1]
gi|283102335|gb|ADB09441.1| clpC Negative regulator of genetic competence clpC/mecB
[Bifidobacterium dentium Bd1]
Length = 863
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV+L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ASPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|373859602|ref|ZP_09602328.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
gi|372450597|gb|EHP24082.1| ATPase AAA-2 domain protein [Bacillus sp. 1NLA3E]
Length = 813
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLSHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQKEVENLIGRGQEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|306823273|ref|ZP_07456649.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|309801911|ref|ZP_07696026.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
gi|304553905|gb|EFM41816.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Bifidobacterium dentium ATCC 27679]
gi|308221467|gb|EFO77764.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
dentium JCVIHMP022]
Length = 863
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV+L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVSLDDTRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 ASPNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIHEGEGVGTQVLIKM 127
>gi|311740167|ref|ZP_07713999.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
gi|311304722|gb|EFQ80793.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium pseudogenitalium ATCC 33035]
Length = 918
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLTKLG 128
>gi|384190952|ref|YP_005576700.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384192096|ref|YP_005577843.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|289178444|gb|ADC85690.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis BB-12]
gi|340364833|gb|AEK30124.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
Length = 862
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L A GVTL R + +++GKG
Sbjct: 27 LAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDTRKQVEEMIGKGT--- 83
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL--G 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 84 AAPTGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKMDVD 142
Query: 118 FSDEKAKELESLSSEPGS 135
SD ++ ++ + G+
Sbjct: 143 LSDLRSTTIDMIRGNSGN 160
>gi|294101565|ref|YP_003553423.1| ATPase AAA-2 domain-containing protein [Aminobacterium colombiense
DSM 12261]
gi|293616545|gb|ADE56699.1| ATPase AAA-2 domain protein [Aminobacterium colombiense DSM 12261]
Length = 830
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA ++ H GTE IL+G+LVEG +AA+ L + GV +VR ++ ++VGKG P
Sbjct: 19 EALRMGHDVIGTEHILLGLLVEGEGVAAQVLNSLGVNFQEVRRQTEELVGKGQ-PILKPI 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
PL+ A+RV+D A+ G V +LLG+ +E + +IL + G
Sbjct: 78 DLPLSPRAKRVLDLAIKEARNMG-VNYVGTEHVLLGLLAEGEGVAAQILLSSG 129
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EAR + GTE +L+G+L EG +AA+ L ++GV V+ E + + +
Sbjct: 95 EARNMGVNYVGTEHVLLGLLAEGEGVAAQILLSSGVDTVIVQREISRFIANNE 147
>gi|218766945|pdb|3FH2|A Chain A, The Crystal Structure Of The Probable Atp-Dependent
Protease (Heat Shock Protein) From Corynebacterium
Glutamicum
Length = 146
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G P
Sbjct: 21 EARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGQGS----QPT 76
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 77 TGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 130
>gi|183601796|ref|ZP_02963166.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219683673|ref|YP_002470056.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|241190706|ref|YP_002968100.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196112|ref|YP_002969667.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|384193703|ref|YP_005579449.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|384195264|ref|YP_005581009.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|386866851|ref|YP_006279845.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|387820575|ref|YP_006300618.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|387822251|ref|YP_006302200.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
gi|423679232|ref|ZP_17654108.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|61679297|gb|AAX52926.1| ClpC [Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219402|gb|EDT90043.1| probable ATP-dependent Clp protease ATP-binding subunit
[Bifidobacterium animalis subsp. lactis HN019]
gi|219621323|gb|ACL29480.1| protease [Bifidobacterium animalis subsp. lactis AD011]
gi|240249098|gb|ACS46038.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240250666|gb|ACS47605.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|295793695|gb|ADG33230.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis V9]
gi|345282562|gb|AEN76416.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BLC1]
gi|366041343|gb|EHN17838.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. lactis BS 01]
gi|385700934|gb|AFI62882.1| ATP-dependent Clp protease ATP-binding subunit [Bifidobacterium
animalis subsp. animalis ATCC 25527]
gi|386653276|gb|AFJ16406.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Bifidobacterium animalis subsp. lactis B420]
gi|386654859|gb|AFJ17988.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Bifidobacterium animalis subsp. lactis Bi-07]
Length = 850
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L A GVTL R + +++GKG
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDTRKQVEEMIGKG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL--G 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPTGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKMDVD 130
Query: 118 FSDEKAKELESLSSEPGS 135
SD ++ ++ + G+
Sbjct: 131 LSDLRSTTIDMIRGNSGN 148
>gi|269836528|ref|YP_003318756.1| ATPase AAA-2 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269785791|gb|ACZ37934.1| ATPase AAA-2 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 817
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA + H GTE +L+G++ EG +AA+ L GV L KVR I+G+GD
Sbjct: 18 LAQEEAHRFNHNYIGTEHLLLGLVREGDGVAARVLSNMGVQLPKVRSAVEFIIGRGDSMI 77
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT A++VI+ AVD + N + LLLG+ E + +L +LG +
Sbjct: 78 VG--EIGLTPRAKKVIELAVDEA-RRLNHHYIGTEHLLLGLVREREGIAAGVLESLGVNL 134
Query: 121 EKAKE--LESLSSEPG 134
EK ++ L+ +S G
Sbjct: 135 EKVRQQVLQVVSQSSG 150
>gi|297627171|ref|YP_003688934.1| ATP-dependent Clp protease ATP-binding protein [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
gi|296922936|emb|CBL57518.1| chaperone clpC (Clp-family ATP-binding protease) (ATP-dependent Clp
protease ATP-binding subunit) [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 858
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE IL+G++ EG +AAK L G++L VR++ ++I+G+G +P
Sbjct: 19 EAKMLNHNYIGTEHILLGLIHEGEGVAAKALEQMGISLEAVREQVIEIIGQGS----TPP 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ N + +LLG+ E + ++L LG
Sbjct: 75 TGHIPFTPRAKKVLEYSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIKLG 128
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIKLGADLNRVRTTVLQLL 142
>gi|306836895|ref|ZP_07469849.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
gi|304567200|gb|EFM42811.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium accolens ATCC 49726]
Length = 958
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLTKLG 128
>gi|227502079|ref|ZP_03932128.1| ATPase with chaperone activity, ATP-binding subunit, partial
[Corynebacterium accolens ATCC 49725]
gi|227077234|gb|EEI15197.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium accolens ATCC 49725]
Length = 953
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLTKLG 128
>gi|390559270|ref|ZP_10243621.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
gi|390174147|emb|CCF82914.1| class III stress response-related ATPase, AAA+ superfamily
[Nitrolancetus hollandicus Lb]
Length = 817
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ H GTE +L+G++ EG +AA+ L GV L KVR I+G+GD
Sbjct: 18 LAQEEAQRFNHNYIGTEHLLLGLVREGDGVAARVLSNMGVQLPKVRSAVEFIIGRGDSMI 77
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT A++VI+ AVD + N + LLLG+ E + +L +LG +
Sbjct: 78 VG--ELGLTPRAKKVIELAVDEA-RRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNL 134
Query: 121 EKAKE 125
EK ++
Sbjct: 135 EKVRQ 139
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA L + GV L KVR + +++V +
Sbjct: 97 EARRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRQQVMQVVSQ 147
>gi|52078581|ref|YP_077372.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|319649145|ref|ZP_08003353.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|404487450|ref|YP_006711556.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423680479|ref|ZP_17655318.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52346444|gb|AAU39078.1| ATP-dependent Clp protease ClpC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317388845|gb|EFV69664.1| genetic competence ClpC/mecB negative regulatory protein [Bacillus
sp. BT1B_CT2]
gi|383441585|gb|EID49294.1| class III stress response-related ATPase [Bacillus licheniformis
WX-02]
Length = 810
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S + P A++V + A+D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QSIHYTP---RAKKVTELAMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|367467387|ref|ZP_09467329.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
gi|365817543|gb|EHN12499.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Patulibacter
sp. I11]
Length = 866
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE IL+G+L E LAA+ L + +T+ +VR + V+IVG G+
Sbjct: 15 LAQEEARTLKHNYIGTEHILLGLLREEEGLAARVLESLDITVERVRAQVVRIVGSGE--E 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P T A++V++ A+ L G++ + +LLG+ E + +IL
Sbjct: 73 VTSGQIPFTPRAKKVLELALREALSLGHN-YIGTEHILLGLVRENEGVAARILLDFDADS 131
Query: 121 EKAK-ELESLSSEPG 134
EK + E+ + S PG
Sbjct: 132 EKIRNEVIRMLSGPG 146
>gi|284043144|ref|YP_003393484.1| ATPase AAA [Conexibacter woesei DSM 14684]
gi|283947365|gb|ADB50109.1| ATPase AAA-2 domain protein [Conexibacter woesei DSM 14684]
Length = 868
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR LKH GTE IL+G+L E LAA+ L + +T+ +VR + V+IVG G+
Sbjct: 15 LAQEEARTLKHNYIGTEHILLGLLREEEGLAARVLESLDITVERVRAQVVRIVGSGE--E 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P T A++V++ A+ L G++ + +LLG+ E + +IL
Sbjct: 73 VTSGQIPFTPRAKKVLELALREALSLGHN-YIGTEHILLGLVRENEGVAARILLDFDADS 131
Query: 121 EKAK-ELESLSSEPG 134
EK + E+ + S PG
Sbjct: 132 EKIRNEVIRMLSGPG 146
>gi|452972567|gb|EME72396.1| ATP-dependent Clp protease ClpC [Bacillus sonorensis L12]
Length = 810
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S + P A++V + A+D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QSIHYTP---RAKKVTELAMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|319654839|ref|ZP_08008914.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
gi|317393402|gb|EFV74165.1| class III stress response-like ATPase [Bacillus sp. 2_A_57_CT2]
Length = 816
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGSDKIQKEVENLIGRGQDAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNESGS 149
>gi|333373136|ref|ZP_08465052.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
gi|332970715|gb|EGK09695.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Desmospora sp.
8437]
Length = 814
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ L KV+ E ++G+G
Sbjct: 16 LAQEEAVRLGHGNIGTEHILLGLVREGEGIAAKALMGLGLGLEKVQKEVESLIGRGQ--- 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + T A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 73 GQPTNIAYTPRAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 143
>gi|384250946|gb|EIE24424.1| hypothetical protein COCSUDRAFT_28166 [Coccomyxa subellipsoidea
C-169]
Length = 849
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ E T +AAK L + GV L R E KI+G+G F
Sbjct: 18 LAQEEARRLGHNFVGTEQILLGLIGESTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 77
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + +LLG+ E + ++L LG
Sbjct: 78 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHILLGLLREGEGVAARVLETLGADA 134
Query: 121 EKAK 124
K +
Sbjct: 135 SKIR 138
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE IL+G+L EG +AA+ L G K+R + +++VG+
Sbjct: 97 EARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADASKIRTQVIRMVGE 147
>gi|309810835|ref|ZP_07704636.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
gi|308435141|gb|EFP58972.1| negative regulator of genetic competence ClpC/MecB [Dermacoccus sp.
Ellin185]
Length = 874
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQEIIGQGQ--Q 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 73 TQSGHIPFTPRAKKVLELSLREGLQLGHS-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGD 57
E +L H GTE IL+G++ EG +AA+ L G L VR ++++ GKG+
Sbjct: 94 EGLQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGADLSTVRTTVIQLLSGYQGKGE 150
>gi|315656011|ref|ZP_07908909.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
gi|315490075|gb|EFU79702.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii ATCC 51333]
Length = 884
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L GTE +L+G++ EG +AA+ L G++L VR + ++I+G+G+ P
Sbjct: 19 EARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGE----QPT 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ G++ + +LLG+ E D ++L LG
Sbjct: 75 TGHIPFTPRARKVLEFSMREALQLGHN-YIGTEHILLGLLREGDGVAAQVLIKLG 128
>gi|209522992|ref|ZP_03271549.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
gi|209496579|gb|EDZ96877.1| ATPase AAA-2 domain protein [Arthrospira maxima CS-328]
Length = 824
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+GI+ EGTS+AAK L + L R E I+G+G
Sbjct: 15 LSQEEARRLGHNFVGTEQLLLGIIGEGTSIAAKVLSDQNLNLDNTRREIESIIGRGSGLM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T A+RV + A+ + GN+ + +LLG+ + + K+L G
Sbjct: 75 --PPEIPFTPRAKRVFESAMKEARQLGNN-YIAPEHILLGLLQDEEGVAAKVLENFG 128
>gi|429731906|ref|ZP_19266529.1| ATPase family protein [Corynebacterium durum F0235]
gi|429144702|gb|EKX87811.1| ATPase family protein [Corynebacterium durum F0235]
Length = 871
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARSFNHNYIGTEHILLGLIQEGECVAAKALESMGISLEAVRQEVEEIIGRGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPHVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|298345554|ref|YP_003718241.1| chaperone ATPase [Mobiluncus curtisii ATCC 43063]
gi|304391110|ref|ZP_07373062.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315656114|ref|ZP_07909005.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|298235615|gb|ADI66747.1| ATPase with chaperone activity, ATP-binding subunit [Mobiluncus
curtisii ATCC 43063]
gi|304325993|gb|EFL93239.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|315493116|gb|EFU82716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 884
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L GTE +L+G++ EG +AA+ L G++L VR + ++I+G+G+ P
Sbjct: 19 EARRLNQNYIGTEHLLLGLIHEGDGIAARALETMGISLEAVRAQVIEIIGEGE----QPT 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V+++++ L+ G++ + +LLG+ E D ++L LG
Sbjct: 75 TGHIPFTPRARKVLEFSMREALQLGHN-YIGTEHILLGLLREGDGVAAQVLIKLG 128
>gi|138893757|ref|YP_001124210.1| negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196251133|ref|ZP_03149812.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
gi|134265270|gb|ABO65465.1| Negative regulator of genetic competence ClpC/MecB [Geobacillus
thermodenitrificans NG80-2]
gi|196209374|gb|EDY04154.1| ATPase AAA-2 domain protein [Geobacillus sp. G11MC16]
Length = 811
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G+
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGNEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 HTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|308235068|ref|ZP_07665805.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis ATCC 14018 = JCM 11026]
gi|311114547|ref|YP_003985768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|415702808|ref|ZP_11458954.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|415705433|ref|ZP_11460704.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|415707392|ref|ZP_11462161.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
gi|417556993|ref|ZP_12208048.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|310946041|gb|ADP38745.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gardnerella
vaginalis ATCC 14019]
gi|333601924|gb|EGL13358.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 315-A]
gi|388052155|gb|EIK75179.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 75712]
gi|388053354|gb|EIK76345.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 284V]
gi|388053781|gb|EIK76745.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 0288E]
Length = 829
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L A GV L R + +++G G
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDNTRKQIKEMIGTGT--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|291006227|ref|ZP_06564200.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 210
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G +P
Sbjct: 19 EARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ---QAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG +
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGADLNRV 134
Query: 124 KE--LESLSSEPG 134
++ L+ LS G
Sbjct: 135 RQQVLQLLSGYQG 147
>gi|415709890|ref|ZP_11463469.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
gi|388055892|gb|EIK78777.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6420B]
Length = 867
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVDLEGTRKQVEEMIGKG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPAGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|269955171|ref|YP_003324960.1| ATPase AAA-2 domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269303852|gb|ACZ29402.1| ATPase AAA-2 domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 852
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDGVRSQVTEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P+ H P T A++V++ ++ L+ G++ + +LLG+ E + ++L +G
Sbjct: 72 QAPQGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLTKMGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLTKMGADLNKVRQQVIQLL 142
>gi|300780448|ref|ZP_07090304.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
gi|300534558|gb|EFK55617.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium genitalium ATCC 33030]
Length = 967
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR E +I+G+G
Sbjct: 15 LAQQEARDLNHNYIGTEHILLGLIQEGEGVAAKALESMGINLDDVRREVEEIIGRGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPHTGHVPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLIKLG 128
>gi|119511432|ref|ZP_01630543.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
gi|119463897|gb|EAW44823.1| UvrB/UvrC protein [Nodularia spumigena CCY9414]
Length = 817
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLAELGVTLKEARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREANSLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFS 62
EA L H TE +L+G+ G +AAK L GV L VR ++ +G+G F S
Sbjct: 94 EANSLGHNYINTEHLLLGLTEAGEGVAAKVLQNLGVDLKNVRTNVIRRLGEGGTVFAS 151
>gi|297243559|ref|ZP_06927490.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
gi|296888310|gb|EFH27051.1| ATP-binding subunits of Clp [Gardnerella vaginalis AMD]
Length = 873
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVDLEGTRKQVEEMIGKG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPAGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|376257826|ref|YP_005145717.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
gi|372120343|gb|AEX84077.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae VA01]
Length = 878
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|385801820|ref|YP_005838223.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
gi|333393443|gb|AEF31361.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis HMP9231]
Length = 829
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L A GV L R + +++G G
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDNTRKQIKEMIGTGT--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|326327969|pdb|3PXG|A Chain A, Structure Of Meca121 And Clpc1-485 Complex
gi|326327971|pdb|3PXG|B Chain B, Structure Of Meca121 And Clpc1-485 Complex
gi|326327973|pdb|3PXG|C Chain C, Structure Of Meca121 And Clpc1-485 Complex
gi|326327975|pdb|3PXG|D Chain D, Structure Of Meca121 And Clpc1-485 Complex
gi|326327977|pdb|3PXG|E Chain E, Structure Of Meca121 And Clpc1-485 Complex
gi|326327979|pdb|3PXG|F Chain F, Structure Of Meca121 And Clpc1-485 Complex
Length = 468
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|297582418|ref|YP_003698198.1| ATPase AAA-2 domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297140875|gb|ADH97632.1| ATPase AAA-2 domain protein [Bacillus selenitireducens MLS10]
Length = 815
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ K++DE K++G G+
Sbjct: 16 LAQEEASRLGHSNIGTEHILLGLIREGEGIAAKALKGLGLGADKIQDEVEKLIGVGEQPA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 GQVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G D
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNSD 146
>gi|311070733|ref|YP_003975656.1| ClpC protein [Bacillus atrophaeus 1942]
gi|419823202|ref|ZP_14346762.1| ClpC protein [Bacillus atrophaeus C89]
gi|310871250|gb|ADP34725.1| ClpC [Bacillus atrophaeus 1942]
gi|388472733|gb|EIM09496.1| ClpC protein [Bacillus atrophaeus C89]
Length = 812
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|16077154|ref|NP_387967.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307897|ref|ZP_03589744.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312218|ref|ZP_03594023.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317152|ref|ZP_03598446.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321415|ref|ZP_03602709.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402774329|ref|YP_006628273.1| class III stress response-related ATPase [Bacillus subtilis QB928]
gi|418034764|ref|ZP_12673233.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|452916619|ref|ZP_21965241.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
gi|586900|sp|P37571.1|CLPC_BACSU RecName: Full=Negative regulator of genetic competence ClpC/MecB
gi|442360|gb|AAA19233.1| ClpC adenosine triphosphatase [Bacillus subtilis]
gi|467474|dbj|BAA05320.1| clpA/clpB family [Bacillus subtilis]
gi|2632353|emb|CAB11862.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis subsp. subtilis str. 168]
gi|351468418|gb|EHA28638.1| class III stress response-related ATPase [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|402479515|gb|AFQ56024.1| Class III stress response-related ATPase, AAA+superfamily [Bacillus
subtilis QB928]
gi|407955777|dbj|BAM49017.1| class III stress response-related ATPase [Bacillus subtilis
BEST7613]
gi|407963048|dbj|BAM56287.1| class III stress response-related ATPase [Bacillus subtilis
BEST7003]
gi|452114528|gb|EME04928.1| negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis MB73/2]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|291457456|ref|ZP_06596846.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|57339190|gb|AAW49584.1| ClpC [Bifidobacterium breve UCC2003]
gi|291381291|gb|EFE88809.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve DSM 20213 = JCM 1192]
gi|339479561|gb|ABE96029.1| Negative regulator of genetic competence clpC/mecB [Bifidobacterium
breve UCC2003]
Length = 869
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|152968278|ref|YP_001364062.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151362795|gb|ABS05798.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 840
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + + ++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVITLL 142
>gi|282898552|ref|ZP_06306540.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
gi|281196420|gb|EFA71329.1| UvrB/UvrC protein [Cylindrospermopsis raciborskii CS-505]
Length = 817
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLTDLGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P P T + + + + G++ + LLLG+ + K+L +LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHGLGHN-YINTEHLLLGLTDAGEGVAAKVLKSLGI-- 129
Query: 121 EKAKELESLSSEPGSV 136
EL+++ S S+
Sbjct: 130 ----ELQTVRSRVMSI 141
>gi|213691598|ref|YP_002322184.1| ATPase AAA [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM
1222]
gi|384198734|ref|YP_005584477.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
gi|213523059|gb|ACJ51806.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|320457686|dbj|BAJ68307.1| Clp protease [Bifidobacterium longum subsp. infantis ATCC 15697 =
JCM 1222]
Length = 861
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|427708390|ref|YP_007050767.1| ATPase [Nostoc sp. PCC 7107]
gi|427360895|gb|AFY43617.1| ATPase AAA-2 domain protein [Nostoc sp. PCC 7107]
Length = 813
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLSELGVTLKEARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKNLFEQSFKEAHGLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|417941914|ref|ZP_12585194.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
gi|376167760|gb|EHS86584.1| ATP-dependent chaperone protein ClpB [Bifidobacterium breve CECT
7263]
Length = 863
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|384196661|ref|YP_005582405.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
gi|333109379|gb|AEF26395.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
breve ACS-071-V-Sch8b]
Length = 863
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|326327981|pdb|3PXI|A Chain A, Structure Of Meca108:clpc
gi|326327983|pdb|3PXI|B Chain B, Structure Of Meca108:clpc
gi|326327985|pdb|3PXI|C Chain C, Structure Of Meca108:clpc
Length = 758
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|428309817|ref|YP_007120794.1| chaperone ATPase [Microcoleus sp. PCC 7113]
gi|428251429|gb|AFZ17388.1| ATPase with chaperone activity, ATP-binding subunit [Microcoleus
sp. PCC 7113]
Length = 827
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 5/132 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ E +AA L + G+T+ +VR+E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEADGIAATVLQSLGITIQEVREEIEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T ++RV++ +++ G V LLLG+ + + ++L LG
Sbjct: 75 --AVEIPFTPRSKRVLELSLEESRTLGQD-YVGTEHLLLGLIRDGEGVAARVLLNLGVDS 131
Query: 121 E--KAKELESLS 130
+ +AK +E LS
Sbjct: 132 KEVRAKVIEMLS 143
>gi|398303898|ref|ZP_10507484.1| genetic competence negative regulator ClpC/MecB [Bacillus
vallismortis DV1-F-3]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|333918015|ref|YP_004491596.1| chaperone activity ATPase [Amycolicicoccus subflavus DQS3-9A1]
gi|333480236|gb|AEF38796.1| ATPase with chaperone activity, ATP-binding subunit
[Amycolicicoccus subflavus DQS3-9A1]
Length = 851
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRNQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQLL 142
>gi|403071334|ref|ZP_10912666.1| ATP-dependent Clp protease [Oceanobacillus sp. Ndiop]
Length = 809
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L + G+ + K+++E K++G G
Sbjct: 16 LSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQEEVEKLIGVGKQPM 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S + P A++V++ + D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QSIHYTP---RAKKVVELSQDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|152964564|ref|YP_001360348.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151359081|gb|ABS02084.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
Length = 851
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+G+G
Sbjct: 33 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQEIIGQGQ--- 89
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 90 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 146
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 112 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 160
>gi|154684604|ref|YP_001419765.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|375360776|ref|YP_005128815.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384263716|ref|YP_005419423.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387896613|ref|YP_006326909.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|394994757|ref|ZP_10387464.1| ClpC [Bacillus sp. 916]
gi|451348524|ref|YP_007447155.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452854149|ref|YP_007495832.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|154350455|gb|ABS72534.1| ClpC [Bacillus amyloliquefaciens FZB42]
gi|371566770|emb|CCF03620.1| ATP-dependent Clp protease ATP-binding subunit clpC [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380497069|emb|CCG48107.1| class III stress response-related ATPase ClpC [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387170723|gb|AFJ60184.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens Y2]
gi|393804324|gb|EJD65736.1| ClpC [Bacillus sp. 916]
gi|449852282|gb|AGF29274.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens IT-45]
gi|452078409|emb|CCP20159.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|429503620|ref|YP_007184804.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485210|gb|AFZ89134.1| Clp protease ATP-binding subunit [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|376288455|ref|YP_005161021.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
gi|371585789|gb|AEX49454.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae BH8]
Length = 877
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|296333083|ref|ZP_06875537.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305672785|ref|YP_003864456.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|350264184|ref|YP_004875491.1| genetic competence negative regulator ClpC/MecB [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|296149699|gb|EFG90594.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411028|gb|ADM36146.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. spizizenii str. W23]
gi|349597071|gb|AEP84859.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|443635019|ref|ZP_21119190.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345210|gb|ELS59276.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|312132327|ref|YP_003999666.1| clpa1 [Bifidobacterium longum subsp. longum BBMN68]
gi|311773667|gb|ADQ03155.1| ClpA1 [Bifidobacterium longum subsp. longum BBMN68]
Length = 869
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|427728669|ref|YP_007074906.1| chaperone ATPase [Nostoc sp. PCC 7524]
gi|427364588|gb|AFY47309.1| ATPase with chaperone activity, ATP-binding subunit [Nostoc sp. PCC
7524]
Length = 815
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTELGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG--F 118
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHSLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLGVDL 131
Query: 119 SDEKAKELESLSSEPGSV 136
+ ++ + L +P V
Sbjct: 132 RNVRSAVIRRLGEDPTVV 149
>gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|38200810|emb|CAE50514.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae]
Length = 883
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 20 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 76
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 77 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 133
>gi|376255026|ref|YP_005143485.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
gi|372118110|gb|AEX70580.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae PW8]
Length = 878
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|376252008|ref|YP_005138889.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
gi|372113512|gb|AEX79571.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC03]
Length = 878
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|376243534|ref|YP_005134386.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
gi|372106776|gb|AEX72838.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae CDCE 8392]
Length = 878
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|298253965|ref|ZP_06977552.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
gi|297532108|gb|EFH71083.1| ATP-binding subunits of Clp [Gardnerella vaginalis 5-1]
Length = 852
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 4 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVGLEGTRKQVEEMIGKG---T 60
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 61 VSPAGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 116
>gi|149174917|ref|ZP_01853541.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
gi|148846254|gb|EDL60593.1| negative regulator of genetic competence ClpC/MecB [Planctomyces
maris DSM 8797]
Length = 846
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-DFFFFSP 63
EA++ H GTE IL+G++ EG+ +AA L V L K+R E KIV G D
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIRLEVEKIVQSGPDMVTMG- 77
Query: 64 EHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
P T A++VI++A++ ++ N V LLLG+ E D ++L LG E+
Sbjct: 78 -KLPQTPRAKKVIEYAMEEA-RNLNHNYVGTEHLLLGLLREQDGVAAQVLMNLGLKLEEV 135
Query: 124 KE 125
+E
Sbjct: 136 RE 137
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G+L E +AA+ L G+ L +VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLLREQDGVAAQVLMNLGLKLEEVREEVLNLLGHG 146
>gi|23464638|ref|NP_695241.1| protease [Bifidobacterium longum NCC2705]
gi|23325195|gb|AAN23877.1| protease [Bifidobacterium longum NCC2705]
Length = 869
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|398309188|ref|ZP_10512662.1| genetic competence negative regulator ClpC/MecB [Bacillus
mojavensis RO-H-1]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|376291130|ref|YP_005163377.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
gi|372104526|gb|AEX68123.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae C7 (beta)]
Length = 878
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|384173746|ref|YP_005555131.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|386756665|ref|YP_006229881.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|428277501|ref|YP_005559236.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|430755612|ref|YP_007211173.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449092799|ref|YP_007425290.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
gi|291482458|dbj|BAI83533.1| class III stress response-related ATPase [Bacillus subtilis subsp.
natto BEST195]
gi|349592970|gb|AEP89157.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|384929947|gb|AFI26625.1| ATPase AAA-2 domain-containing protein [Bacillus sp. JS]
gi|430020132|gb|AGA20738.1| ATP-dependent Clp protease ClpC [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449026714|gb|AGE61953.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus subtilis XF-1]
Length = 810
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|321313756|ref|YP_004206043.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
gi|320020030|gb|ADV95016.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus subtilis BSn5]
Length = 810
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 7/138 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 132 NKARQQVLQLLGSNETGS 149
>gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum DJO10A]
gi|189438873|ref|YP_001953954.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227546736|ref|ZP_03976785.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. longum ATCC 55813]
gi|239620712|ref|ZP_04663743.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|317481706|ref|ZP_07940738.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689668|ref|YP_004209402.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|322691629|ref|YP_004221199.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|419847456|ref|ZP_14370628.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|419850517|ref|ZP_14373505.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|419852605|ref|ZP_14375472.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|419855456|ref|ZP_14378213.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
gi|189427308|gb|ACD97456.1| ATP-binding subunit of Clp protease [Bifidobacterium longum DJO10A]
gi|227212698|gb|EEI80579.1| ATP-dependent protease, ATPase subunit [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239516288|gb|EEQ56155.1| ClpC [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|291516227|emb|CBK69843.1| ATPases with chaperone activity, ATP-binding subunit
[Bifidobacterium longum subsp. longum F8]
gi|316916820|gb|EFV38210.1| ATPase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456485|dbj|BAJ67107.1| Clp protease [Bifidobacterium longum subsp. longum JCM 1217]
gi|320461004|dbj|BAJ71624.1| Clp protease [Bifidobacterium longum subsp. infantis 157F]
gi|386408907|gb|EIJ23792.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 35B]
gi|386410285|gb|EIJ25079.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 2-2B]
gi|386411010|gb|EIJ25774.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 1-6B]
gi|386415546|gb|EIJ30075.1| Clp amino terminal domain protein [Bifidobacterium longum subsp.
longum 44B]
Length = 869
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|375291593|ref|YP_005126133.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|376246431|ref|YP_005136670.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|376249217|ref|YP_005141161.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|376285444|ref|YP_005158654.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|376293971|ref|YP_005165645.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|419861512|ref|ZP_14384144.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|371578959|gb|AEX42627.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 31A]
gi|371581264|gb|AEX44931.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae 241]
gi|372109061|gb|AEX75122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC01]
gi|372111294|gb|AEX77354.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC02]
gi|372115785|gb|AEX81843.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae HC04]
gi|387981983|gb|EIK55504.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 878
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|384201060|ref|YP_005586807.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754067|gb|AEI97056.1| Clp protease [Bifidobacterium longum subsp. longum KACC 91563]
Length = 871
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|297181778|gb|ADI17958.1| ATPases with chaperone activity, ATP-binding subunit [uncultured
Chloroflexi bacterium HF0200_09I09]
Length = 836
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ H GTE +L+G++ EG +AAK L GV L KVR I+G+GD
Sbjct: 18 LAQEEAQRFNHNYIGTEHLLLGLVREGDGVAAKVLSNLGVELNKVRSAVEFIIGRGD--R 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ LT A+RVI+ AVD + + N + LLLG+ E + +L +LG +
Sbjct: 76 STSGEIGLTPRAKRVIELAVD-EARRLNHSYIGTEHLLLGLVREGEGIAAGVLESLGVNL 134
Query: 121 EKAK 124
E+ +
Sbjct: 135 ERVR 138
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA L + GV L +VR E+ +I+ +
Sbjct: 97 EARRLNHSYIGTEHLLLGLVREGEGIAAGVLESLGVNLERVRGETTRILAQ 147
>gi|375293788|ref|YP_005128328.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
gi|371583460|gb|AEX47126.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
diphtheriae INCA 402]
Length = 878
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E D ++L LG
Sbjct: 72 -EPPAGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGDGVAAQVLVKLG 128
>gi|283783197|ref|YP_003373951.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
gi|283441539|gb|ADB14005.1| negative regulator of genetic competence ClpC/MecB [Gardnerella
vaginalis 409-05]
Length = 862
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALSSKGVGLEGTRKQVEEMIGKG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPAGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|167629433|ref|YP_001679932.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
gi|167592173|gb|ABZ83921.1| clpc ATPase [Heliobacterium modesticaldum Ice1]
Length = 814
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA LKHP G+E +L+G++ EG + AK L + + L +VR + +++VG+G P
Sbjct: 19 EAVALKHPAVGSEHLLLGLIREGEGIGAKALLSMHLDLEQVRRQVIRLVGEG---ASEPS 75
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT A+R ++ A + + G + V +LLG+ E + ++LA LG + EK +
Sbjct: 76 EIGLTPRAKRALELANEEGRRQGVN-YVGTEHILLGLIREGEGVAARVLAELGLTLEKVR 134
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
E R+ GTE IL+G++ EG +AA+ L G+TL KVR + + ++G
Sbjct: 93 EGRRQGVNYVGTEHILLGLIREGEGVAARVLAELGLTLEKVRHQVMTLLG 142
>gi|296454596|ref|YP_003661739.1| ATPase domain-containing protein [Bifidobacterium longum subsp.
longum JDM301]
gi|296184027|gb|ADH00909.1| ATPase AAA-2 domain protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 881
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GV L R + +++GKG+
Sbjct: 15 LAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V+++++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPNGHIPFTPHAKQVLEFSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|440684474|ref|YP_007159269.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
gi|428681593|gb|AFZ60359.1| ATPase AAA-2 domain protein [Anabaena cylindrica PCC 7122]
Length = 832
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 34 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDARREVEKIIGRGSGFV 93
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 94 --PPEIPFTPKVKSLFEQSFREAHSLGHN-YINTEHLLLGLTESGEGVAAKVLQNLG 147
>gi|186683718|ref|YP_001866914.1| ATPase [Nostoc punctiforme PCC 73102]
gi|186466170|gb|ACC81971.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
Length = 817
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G + + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFKEAHSLGQN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|212637926|ref|YP_002314446.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
gi|212559406|gb|ACJ32461.1| Class III stress response-related ATPase, ClpC [Anoxybacillus
flavithermus WK1]
Length = 813
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G+
Sbjct: 19 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGNEVG 78
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 79 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 134
Query: 121 EKAKE 125
KA++
Sbjct: 135 NKARQ 139
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 97 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 149
>gi|149183498|ref|ZP_01861926.1| ClpC [Bacillus sp. SG-1]
gi|148848792|gb|EDL63014.1| ClpC [Bacillus sp. SG-1]
Length = 813
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++GKG
Sbjct: 16 LAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKGLTALGLSPEKIQKEVESLIGKGKENS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|433447284|ref|ZP_20410881.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
gi|431999948|gb|ELK20855.1| Class III stress response-related ATPase, ClpC subunit
[Anoxybacillus flavithermus TNO-09.006]
Length = 810
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G+
Sbjct: 16 LAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGNEVG 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 143
>gi|434403529|ref|YP_007146414.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257784|gb|AFZ23734.1| ATPase with chaperone activity, ATP-binding subunit
[Cylindrospermum stagnale PCC 7417]
Length = 817
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLTELGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHSLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|415720990|ref|ZP_11468234.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
gi|415724626|ref|ZP_11470004.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
gi|388061251|gb|EIK83908.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Bmash]
gi|388062422|gb|EIK85039.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703C2mash]
Length = 865
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L A GV L R + +++G G
Sbjct: 15 LAQEEARALQHNYIGTEHILLGLIREGEGIAAKALSAKGVDLDGTRKQVKEMIGTG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPNGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|415712066|ref|ZP_11464562.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|415715746|ref|ZP_11466169.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
gi|388057293|gb|EIK80125.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 55152]
gi|388058193|gb|EIK80991.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1400E]
Length = 829
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L A GV L R + +++G G
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGEGIAAKALNAKGVELDDTRKQIKEMIGTGT--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VSPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|242624367|ref|YP_003002285.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
gi|239997475|gb|ACS36997.1| ATP-dependent clp protease ATP-binding subunit [Aureoumbra
lagunensis]
Length = 833
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
E+R+L H GTE IL+G++ E +A K L + GVTL + R E +I+G+G F
Sbjct: 19 ESRRLGHNFVGTEQILLGLIGENGGVAYKVLRSLGVTLREARTEVERIIGRGSGFVAV-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P T A+RV++ A++ G+ G + +LL + E G ++L LG
Sbjct: 77 EIPFTPRAKRVLEIAIEEARDLGH-GYIGTEHILLALLEEEVGVGVRVLQQLGL 129
>gi|403718430|ref|ZP_10943315.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
gi|403208500|dbj|GAB97998.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kineosphaera
limosa NBRC 100340]
Length = 864
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ I+G+G
Sbjct: 15 LAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQDIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|289759754|ref|ZP_06519132.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289715318|gb|EFD79330.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length = 279
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P
Sbjct: 19 EARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG +
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAELTRV 134
Query: 124 KE 125
++
Sbjct: 135 RQ 136
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|425471008|ref|ZP_18849868.1| Similar to Q110X8_TRIEI TPR repeat containing protein [Microcystis
aeruginosa PCC 9701]
gi|389883206|emb|CCI36398.1| Similar to Q110X8_TRIEI TPR repeat containing protein [Microcystis
aeruginosa PCC 9701]
Length = 1612
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 7/113 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H G E I +G++ E T +A++ L G+TL R E KI+GKG
Sbjct: 15 LAQEEARRLGHNFVGAEFIFLGLIGEATGIASQVLRQQGITLKNARIEVEKILGKGS--G 72
Query: 61 FSPE-HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPG 109
SPE +P P TE A+ V++ A+ K G S + LL+GI+ + +S G
Sbjct: 73 ISPEMNPVDIPFTESAKLVLNSALSFADKLG-SESIDTEHLLIGIFQQRESTG 124
>gi|415726926|ref|ZP_11471154.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
gi|388062655|gb|EIK85260.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 00703Dmash]
Length = 868
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +AAK L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGDGIAAKALSSKGVDLESTRKQVEEMIGKG---A 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VAPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGIGTQVLIKM 127
>gi|357390336|ref|YP_004905176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kitasatospora
setae KM-6054]
gi|311896812|dbj|BAJ29220.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Kitasatospora setae KM-6054]
Length = 838
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|410454418|ref|ZP_11308357.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
gi|409932233|gb|EKN69200.1| Class III stress response-related ATPase, ClpC [Bacillus
bataviensis LMG 21833]
Length = 813
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+ G+ K++ E ++GKG
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYGLGLGSDKIQKEVENLIGKGQETS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|326327731|pdb|2Y1Q|A Chain A, Crystal Structure Of Clpc N-Terminal Domain
Length = 150
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+ +
Sbjct: 20 EALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRAQEMSQTIH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNE 146
>gi|284034301|ref|YP_003384232.1| ATPase AAA-2 domain-containing protein [Kribbella flavida DSM
17836]
gi|283813594|gb|ADB35433.1| ATPase AAA-2 domain protein [Kribbella flavida DSM 17836]
Length = 843
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|326383982|ref|ZP_08205665.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197142|gb|EGD54333.1| ATPase AAA-2 domain-containing protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 846
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|357412696|ref|YP_004924432.1| ATPase AAA [Streptomyces flavogriseus ATCC 33331]
gi|320010065|gb|ADW04915.1| ATPase AAA-2 domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|229821882|ref|YP_002883408.1| ATPase AAA-2 domain-containing protein [Beutenbergia cavernae DSM
12333]
gi|229567795|gb|ACQ81646.1| ATPase AAA-2 domain protein [Beutenbergia cavernae DSM 12333]
Length = 843
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + ++I+G+G
Sbjct: 15 LAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDIVRQQVIEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLGKLG 128
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + +++V
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLGKLGADLNRVRQQVLQLV 142
>gi|302535160|ref|ZP_07287502.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
gi|302444055|gb|EFL15871.1| ATP-dependent chaperone ClpB [Streptomyces sp. C]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|239988660|ref|ZP_04709324.1| putative ATP-dependent Clp protease [Streptomyces roseosporus NRRL
11379]
gi|291445649|ref|ZP_06585039.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
gi|411006538|ref|ZP_11382867.1| ATP-dependent Clp protease [Streptomyces globisporus C-1027]
gi|291348596|gb|EFE75500.1| ATP-dependent Clp protease [Streptomyces roseosporus NRRL 15998]
Length = 842
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|182437911|ref|YP_001825630.1| ATP-dependent Clp protease [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466427|dbj|BAG20947.1| putative ATP-dependent Clp protease [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 842
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|443625395|ref|ZP_21109840.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
gi|443341108|gb|ELS55305.1| putative ATP-dependent Clp protease [Streptomyces viridochromogenes
Tue57]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|414079572|ref|YP_007000996.1| ATP-dependent Clp protease [Anabaena sp. 90]
gi|413972851|gb|AFW96939.1| ATP-dependent Clp protease [Anabaena sp. 90]
Length = 816
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKEARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHGLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
mobile DSM 13181]
Length = 829
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G+L EG +AA L + G+ L +VR ++VGKG P
Sbjct: 19 EALRLGHDVIGTEHILLGLLAEGDGVAAHVLMSLGIDLDEVRKRVEQLVGKGQ-PKDKPI 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PL+ A+RV+D A+ G V +LLG+ +E + ++L ++G +K
Sbjct: 78 DLPLSPRAKRVLDLAMREARNMG-VNYVGTEHILLGLLAEGEGIAAQVLMSMGLDTQKVY 136
Query: 125 ----------ELESLSSEPG 134
E++ +S PG
Sbjct: 137 QEVIRYLSGGEVDQMSQSPG 156
>gi|386356248|ref|YP_006054494.1| ATP-dependent Clp protease [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806756|gb|AEW94972.1| putative ATP-dependent Clp protease [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 843
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|365866162|ref|ZP_09405787.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
gi|364004427|gb|EHM25542.1| putative ATP-dependent Clp protease [Streptomyces sp. W007]
Length = 842
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|374988711|ref|YP_004964206.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
gi|297159363|gb|ADI09075.1| putative ATP-dependent Clp protease [Streptomyces bingchenggensis
BCW-1]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|386384235|ref|ZP_10069633.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
gi|385668306|gb|EIF91651.1| ATPase AAA-2 domain-containing protein [Streptomyces tsukubaensis
NRRL18488]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|345016096|ref|YP_004818450.1| ATPase AAA [Streptomyces violaceusniger Tu 4113]
gi|344042445|gb|AEM88170.1| ATPase AAA-2 domain protein [Streptomyces violaceusniger Tu 4113]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|254386473|ref|ZP_05001776.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
gi|194345321|gb|EDX26287.1| clp-family ATP-binding protease [Streptomyces sp. Mg1]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase [Geobacillus kaustophilus HTA426]
gi|297528454|ref|YP_003669729.1| ATPase AAA [Geobacillus sp. C56-T3]
gi|375006890|ref|YP_004980520.1| negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448236388|ref|YP_007400446.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
gi|56378455|dbj|BAD74363.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus
HTA426]
gi|297251706|gb|ADI25152.1| ATPase AAA-2 domain protein [Geobacillus sp. C56-T3]
gi|359285736|gb|AEV17420.1| Negative regulator of genetic competence [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445205230|gb|AGE20695.1| ATP-dependent Clp protease [Geobacillus sp. GHH01]
Length = 810
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGSEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 HTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|418246284|ref|ZP_12872681.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
gi|354509829|gb|EHE82761.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 14067]
Length = 925
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPTTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|339006576|ref|ZP_08639151.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|421875241|ref|ZP_16306835.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
gi|338775785|gb|EGP35313.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus LMG 15441]
gi|372455709|emb|CCF16384.1| negative regulator of genetic competence ClpC/MecB [Brevibacillus
laterosporus GI-9]
Length = 820
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-----GDFF 59
EA +L H GTE +L+G++ EG +AAK L A G+ L K+++E ++G+ +
Sbjct: 20 EAVRLGHKDIGTEHVLLGLIREGEGIAAKALQALGLGLDKIQNEVESLIGRAPEQPANTT 79
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
++P + P A++VI+ ++D K G++ V +LLG+ E + +I+ LG S
Sbjct: 80 NYTPNYTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGIAARIMNNLGIS 135
Query: 120 DEKAKE 125
KA++
Sbjct: 136 LNKARQ 141
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EARKL H GTE IL+G++ EG +AA+ + G++L K R + ++++G +
Sbjct: 99 EARKLGHTYVGTEHILLGLIREGEGIAARIMNNLGISLNKARQQVLQLLGSSEMM 153
>gi|455652535|gb|EMF31161.1| Clp-family ATP-binding protease [Streptomyces gancidicus BKS 13-15]
Length = 841
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|417969541|ref|ZP_12610480.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
gi|344046258|gb|EGV41924.1| hypothetical protein CgS9114_00865 [Corynebacterium glutamicum
S9114]
Length = 925
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPTTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|345000382|ref|YP_004803236.1| ATPase AAA-2 domain-containing protein [Streptomyces sp. SirexAA-E]
gi|344316008|gb|AEN10696.1| ATPase AAA-2 domain protein [Streptomyces sp. SirexAA-E]
Length = 842
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|269793848|ref|YP_003313303.1| chaperone ATPase [Sanguibacter keddieii DSM 10542]
gi|269096033|gb|ACZ20469.1| ATPase with chaperone activity, ATP-binding subunit [Sanguibacter
keddieii DSM 10542]
Length = 858
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVRSQVTEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLTKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLTKLGADLNRVRQQVIQLL 142
>gi|269926455|ref|YP_003323078.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790115|gb|ACZ42256.1| ATPase AAA-2 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 820
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA + H GTE IL+G++ EG +AA+ L + GV L KVR I+G+G E
Sbjct: 25 EAARFNHNYIGTEHILLGLVREGDGVAARVLASMGVQLQKVRAAVEFIIGRG-------E 77
Query: 65 HPP-----LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
PP LT A+RVI+ A D + K N + LLLG+ E + +L +LG +
Sbjct: 78 RPPQGEIGLTPRARRVIELAFD-EAKRQNHHYIGTEHLLLGLVREGEGIAAGVLESLGVN 136
Query: 120 DEKAK 124
EK +
Sbjct: 137 LEKVR 141
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EA++ H GTE +L+G++ EG +AA L + GV L KVR + ++++ + +
Sbjct: 100 EAKRQNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRAQVLQVINQSSAY 154
>gi|298490318|ref|YP_003720495.1| ATPase AAA-2 domain-containing protein ['Nostoc azollae' 0708]
gi|298232236|gb|ADI63372.1| ATPase AAA-2 domain protein ['Nostoc azollae' 0708]
Length = 815
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLAELGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + LLLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFREAHSLGHN-YINTEHLLLGLTEAGEGVAAKVLQNLG 128
>gi|261417579|ref|YP_003251261.1| ATPase AAA [Geobacillus sp. Y412MC61]
gi|319765237|ref|YP_004130738.1| ATPase AAA [Geobacillus sp. Y412MC52]
gi|261374036|gb|ACX76779.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC61]
gi|317110103|gb|ADU92595.1| ATPase AAA-2 domain protein [Geobacillus sp. Y412MC52]
Length = 810
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPDKIQKEVESLIGRGSEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 HTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|297192907|ref|ZP_06910305.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
gi|197722625|gb|EDY66533.1| ATP-dependent Clp protease [Streptomyces pristinaespiralis ATCC
25486]
Length = 841
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|297201430|ref|ZP_06918827.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
gi|197713837|gb|EDY57871.1| ATP-dependent chaperone ClpB [Streptomyces sviceus ATCC 29083]
Length = 841
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|440705221|ref|ZP_20886021.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
gi|440273037|gb|ELP61838.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
turgidiscabies Car8]
Length = 842
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|83999833|emb|CAH60133.1| putative Clp-family ATP-binding protease [Streptomyces
tenjimariensis]
Length = 841
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|395769499|ref|ZP_10450014.1| Clp family ATP-binding protease [Streptomyces acidiscabies 84-104]
Length = 842
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|291452160|ref|ZP_06591550.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|359151484|ref|ZP_09184191.1| ATP-dependent Clp protease [Streptomyces sp. S4]
gi|421738771|ref|ZP_16177114.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
gi|291355109|gb|EFE82011.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|406692815|gb|EKC96493.1| ATPase with chaperone activity, ATP-binding subunit [Streptomyces
sp. SM8]
Length = 840
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|19553872|ref|NP_601874.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|62391515|ref|YP_226917.1| ATP-dependent protease [Corynebacterium glutamicum ATCC 13032]
gi|21325450|dbj|BAC00072.1| ATPases with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum ATCC 13032]
gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN)
[Corynebacterium glutamicum ATCC 13032]
gi|385144766|emb|CCH25805.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium glutamicum K051]
Length = 925
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPTTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|83316491|gb|ABC02421.1| ClpC [Bacillus weihenstephanensis]
Length = 346
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G +
Sbjct: 15 EAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVH 74
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 75 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 130
Query: 125 E--LESLSSEPGS 135
+ L+ L S S
Sbjct: 131 QQVLQLLGSNEAS 143
>gi|408826980|ref|ZP_11211870.1| ATPase AAA [Streptomyces somaliensis DSM 40738]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|418476245|ref|ZP_13045570.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
gi|371543153|gb|EHN71987.1| Clp-family ATP-binding protease [Streptomyces coelicoflavus ZG0656]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|427709493|ref|YP_007051870.1| Clp domain-containing protein [Nostoc sp. PCC 7107]
gi|427361998|gb|AFY44720.1| Clp domain protein [Nostoc sp. PCC 7107]
Length = 557
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ E T +AA+ L G+ L R E KI+G G F
Sbjct: 419 LAQEEARRLGHNFVGTEQILLGLIGEVTGVAAQVLKLKGINLRDTRIEVEKIIGLGSGFV 478
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T++A+RV D +++ + K+ ++ DLLLG + ++L LG +
Sbjct: 479 --AVEIPFTQNAKRVFDLSLE-EAKALKHNYISTGDLLLGCMRLEEGVAVRVLEILGINL 535
Query: 121 EKAKE 125
+ +E
Sbjct: 536 QNLRE 540
>gi|21221802|ref|NP_627581.1| Clp-family ATP-binding protease [Streptomyces coelicolor A3(2)]
gi|289770914|ref|ZP_06530292.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
gi|4585605|emb|CAB40873.1| putative Clp-family ATP-binding protease [Streptomyces coelicolor
A3(2)]
gi|289701113|gb|EFD68542.1| Clp-family ATP-binding protease [Streptomyces lividans TK24]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|453050790|gb|EME98316.1| putative ATP-dependent Clp protease [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|441154708|ref|ZP_20966583.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440618124|gb|ELQ81204.1| ATPase AAA [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 839
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|145296675|ref|YP_001139496.1| hypothetical protein cgR_2580 [Corynebacterium glutamicum R]
gi|140846595|dbj|BAF55594.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 925
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGQGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPTTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|29829142|ref|NP_823776.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 842
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|429194529|ref|ZP_19186617.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
gi|428669694|gb|EKX68629.1| negative regulator of genetic competence ClpC/MecB [Streptomyces
ipomoeae 91-03]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|408530234|emb|CCK28408.1| putative ATP-dependent Clp protease ATP-binding subunit
[Streptomyces davawensis JCM 4913]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|302553198|ref|ZP_07305540.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
gi|302470816|gb|EFL33909.1| ATP-dependent chaperone ClpB [Streptomyces viridochromogenes DSM
40736]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|295837256|ref|ZP_06824189.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
gi|197699938|gb|EDY46871.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. SPB74]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|386841647|ref|YP_006246705.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101948|gb|AEY90832.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794942|gb|AGF64991.1| Clp-family ATP-binding protease [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 840
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|290958398|ref|YP_003489580.1| Clp family ATP-binding protease [Streptomyces scabiei 87.22]
gi|260647924|emb|CBG71029.1| putative Clp-family ATP-binding protease [Streptomyces scabiei
87.22]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|302544384|ref|ZP_07296726.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
hygroscopicus ATCC 53653]
gi|302462002|gb|EFL25095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
himastatinicus ATCC 53653]
Length = 840
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|302521030|ref|ZP_07273372.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|318061546|ref|ZP_07980267.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actG]
gi|318076619|ref|ZP_07983951.1| ATP-dependent Clp protease [Streptomyces sp. SA3_actF]
gi|333025279|ref|ZP_08453343.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
gi|302429925|gb|EFL01741.1| ATP-dependent chaperone ClpB [Streptomyces sp. SPB78]
gi|332745131|gb|EGJ75572.1| putative ATP-dependent Clp protease [Streptomyces sp. Tu6071]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX]
gi|71917007|gb|AAZ56909.1| ATPase [Thermobifida fusca YX]
Length = 830
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|417749970|ref|ZP_12398347.1| ATPase family protein associated with various cellular activities
(AAA), partial [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336458510|gb|EGO37482.1| ATPase family protein associated with various cellular activities
(AAA) [Mycobacterium avium subsp. paratuberculosis S397]
Length = 340
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P
Sbjct: 19 EARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|256831690|ref|YP_003160417.1| ATPase AAA-2 domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256685221|gb|ACV08114.1| ATPase AAA-2 domain protein [Jonesia denitrificans DSM 20603]
Length = 842
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVRSQVTEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLTKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLTKLGADLNRVRQQVIQLL 142
>gi|291438069|ref|ZP_06577459.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291340964|gb|EFE67920.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|83316459|gb|ABC02403.1| ClpC [Bacillus weihenstephanensis]
Length = 336
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G +
Sbjct: 15 EAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVH 74
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 75 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 130
Query: 125 E--LESLSSEPGS 135
+ L+ L S S
Sbjct: 131 QQVLQLLGSNEAS 143
>gi|398783815|ref|ZP_10547185.1| ATPase AAA [Streptomyces auratus AGR0001]
gi|396995722|gb|EJJ06732.1| ATPase AAA [Streptomyces auratus AGR0001]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|239825665|ref|YP_002948289.1| ATPase AAA [Geobacillus sp. WCH70]
gi|239805958|gb|ACS23023.1| ATPase AAA-2 domain protein [Geobacillus sp. WCH70]
Length = 811
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQKEVESLIGRGHEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 HTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|387928140|ref|ZP_10130818.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
gi|387587726|gb|EIJ80048.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus PB1]
Length = 814
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L+A G+ K++ E ++G G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQKEVENLIGTGKEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|383651370|ref|ZP_09961776.1| ATP-dependent Clp protease [Streptomyces chartreusis NRRL 12338]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|254393706|ref|ZP_05008829.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294813216|ref|ZP_06771859.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
gi|326441673|ref|ZP_08216407.1| putative ATP-dependent Clp protease [Streptomyces clavuligerus ATCC
27064]
gi|197707316|gb|EDY53128.1| ATP-dependent Clp protease [Streptomyces clavuligerus ATCC 27064]
gi|294325815|gb|EFG07458.1| Clp-family ATP-binding protease [Streptomyces clavuligerus ATCC
27064]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|456391789|gb|EMF57147.1| Clp family ATP-binding protease [Streptomyces bottropensis ATCC
25435]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|441522288|ref|ZP_21003937.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
gi|441458115|dbj|GAC61898.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
sihwensis NBRC 108236]
Length = 846
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|329939478|ref|ZP_08288814.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
gi|329301707|gb|EGG45601.1| Clp-family ATP-binding protease [Streptomyces griseoaurantiacus
M045]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|311112373|ref|YP_003983595.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
gi|310943867|gb|ADP40161.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rothia
dentocariosa ATCC 17931]
Length = 850
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG + A+ L + GVTL VR++ IVG
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVREQVQSIVGP----- 69
Query: 61 FSPEHP----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP+ P P T A++V++ ++ ++ N G + +LLG+ ++ +++L+ +
Sbjct: 70 -SPQAPSGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRASEGVANQVLSKV 127
Query: 117 GFSDEKAKE--LESLSSEPGSVDD 138
G + ++ ++ +S PG+ ++
Sbjct: 128 GVQGAEVRQAVMDLISGYPGNNEN 151
>gi|302559271|ref|ZP_07311613.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
gi|302476889|gb|EFL39982.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
griseoflavus Tu4000]
Length = 841
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|83316475|gb|ABC02412.1| ClpC [Bacillus weihenstephanensis]
Length = 332
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G +
Sbjct: 15 EAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVH 74
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA+
Sbjct: 75 YTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKAR 130
Query: 125 E--LESLSSEPGS 135
+ L+ L S S
Sbjct: 131 QQVLQLLGSNEAS 143
>gi|297563907|ref|YP_003682880.1| ATPase AAA-2 domain-containing protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848356|gb|ADH70374.1| ATPase AAA-2 domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 836
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|269128670|ref|YP_003302040.1| ATPase AAA-2 domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268313628|gb|ACZ00003.1| ATPase AAA-2 domain protein [Thermomonospora curvata DSM 43183]
Length = 837
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|300742477|ref|ZP_07072498.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
gi|300381662|gb|EFJ78224.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Rothia
dentocariosa M567]
Length = 850
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 13/144 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG + A+ L + GVTL VR++ IVG
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVREQVQSIVGP----- 69
Query: 61 FSPEHP----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
SP+ P P T A++V++ ++ ++ N G + +LLG+ ++ +++L+ +
Sbjct: 70 -SPQAPSGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRASEGVANQVLSKV 127
Query: 117 GFSDEKAKE--LESLSSEPGSVDD 138
G + ++ ++ +S PG+ ++
Sbjct: 128 GVQGAEVRQAVMDLISGYPGNNEN 151
>gi|294630658|ref|ZP_06709218.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
gi|292833991|gb|EFF92340.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Streptomyces
sp. e14]
Length = 841
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|29831240|ref|NP_825874.1| ATP-dependent Clp protease [Streptomyces avermitilis MA-4680]
gi|29608355|dbj|BAC72409.1| putative ATP-dependent Clp protease [Streptomyces avermitilis
MA-4680]
Length = 841
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|326778547|ref|ZP_08237812.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
gi|326658880|gb|EGE43726.1| ATPase AAA-2 domain protein [Streptomyces griseus XylebKG-1]
Length = 863
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 36 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 92
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 93 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 149
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 115 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 163
>gi|345852637|ref|ZP_08805570.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
gi|345635897|gb|EGX57471.1| ATP-dependent Clp protease [Streptomyces zinciresistens K42]
Length = 841
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|302841992|ref|XP_002952540.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
gi|300262179|gb|EFJ46387.1| hypothetical protein VOLCADRAFT_75431 [Volvox carteri f.
nagariensis]
Length = 915
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+G++ E T +AAK L + GV L R E KI+G+G F
Sbjct: 89 LAQEEARRLGHNFVGTEQLLLGLIGESTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV 148
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +++ + G++ + +LLG+ E + ++L LG
Sbjct: 149 --AVEIPFTPRAKRVLEMSLEEARQLGHN-YIGTEHILLGLLREGEGVAARVLETLGADP 205
Query: 121 EKAK 124
K +
Sbjct: 206 AKIR 209
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE IL+G+L EG +AA+ L G K+R + +++VG+
Sbjct: 168 EARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADPAKIRTQVIRMVGE 218
>gi|408678941|ref|YP_006878768.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
gi|328883270|emb|CCA56509.1| ATP-dependent Clp protease [Streptomyces venezuelae ATCC 10712]
Length = 840
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|317126827|ref|YP_004093109.1| ATPase AAA [Bacillus cellulosilyticus DSM 2522]
gi|315471775|gb|ADU28378.1| ATPase AAA-2 domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 816
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++GKG+
Sbjct: 16 LAQEEAMRLGHNNIGTEHILLGLVREGEGIAAKALVALGLSPEKIQTEVENLIGKGEEKT 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P A++VI+ ++D K G+S V +LLG+ E + ++L +G S
Sbjct: 76 KQIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNVGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNVGVSLNKARQQVLQLLGSNE 146
>gi|256397471|ref|YP_003119035.1| ATPase AAA [Catenulispora acidiphila DSM 44928]
gi|256363697|gb|ACU77194.1| ATPase AAA-2 domain protein [Catenulispora acidiphila DSM 44928]
Length = 850
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|441518183|ref|ZP_20999908.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
gi|441454872|dbj|GAC57869.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
hirsuta DSM 44140 = NBRC 16056]
Length = 846
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNSVRQQVIQLL 142
>gi|296138309|ref|YP_003645552.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296026443|gb|ADG77213.1| ATPase AAA-2 domain protein [Tsukamurella paurometabola DSM 20162]
Length = 855
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +IVG+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIVGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|326504928|dbj|BAK06755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R+L H T G+E IL+G++ EGT +AAK L + G+ L R E K++G+G
Sbjct: 66 LAQEESRRLGHHTVGSEQILLGLVGEGTGIAAKVLRSAGLNLKDARAEVEKVLGRGPGLI 125
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKIL 113
P P T A++VI+ + + + G++ + LLLG+ E D +L
Sbjct: 126 --PVEIPFTASAKKVIESSNEESRQLGHN-YIGTEHLLLGLIREDDGAAAIVL 175
>gi|114567873|ref|YP_755027.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338808|gb|ABI69656.1| ATPases with chaperone activity, ATP-binding subunit
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 828
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L HP GTE IL+G+L EG + A+ L +G+ L KVR+E +++G P
Sbjct: 19 EARQLNHPAIGTEHILLGLLREGEGVGARALLNSGIDLEKVREEINRVIGANGEAVEKPA 78
Query: 65 HP-PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
P+T A++V + A D G V LLL + E + ++L ++G ++
Sbjct: 79 GDLPVTPRAKKVFNLAFDEARLQG-VNYVGTEHLLLAVLREEEGVAGQVLHSMGVKLDQI 137
Query: 124 KE 125
+E
Sbjct: 138 RE 139
>gi|271970316|ref|YP_003344512.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
gi|270513491|gb|ACZ91769.1| class III stress response-related ATPase [Streptosporangium roseum
DSM 43021]
Length = 835
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 SAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|443309789|ref|ZP_21039475.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
gi|442780161|gb|ELR90368.1| ATPase with chaperone activity, ATP-binding subunit [Synechocystis
sp. PCC 7509]
Length = 822
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H G+E +L+G++ E TS+AAK L G+ + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNLVGSEQVLLGLIGENTSIAAKVLNDLGINIKNARVEVEKIIGRGSRFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ P T +RV D + + + G++ + L LG+ E + K++ LG
Sbjct: 75 SA--EIPFTPKMKRVFDKSFEAARQLGDNF-IAPEHLFLGLIEEGEGVAIKVIENLGVDT 131
Query: 121 EKAKE--LESLSSEP 133
A++ L+ L +P
Sbjct: 132 AVARKAVLDELEKQP 146
>gi|359421709|ref|ZP_09213621.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
gi|358242425|dbj|GAB11690.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia araii
NBRC 100433]
Length = 848
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRTQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPAGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|409356843|ref|ZP_11235230.1| ATPases with chaperone activity, ATP-binding subunit [Dietzia
alimentaria 72]
Length = 884
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQLL 142
>gi|228995472|ref|ZP_04155141.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
gi|229003095|ref|ZP_04160946.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228758155|gb|EEM07349.1| Negative regulator of genetic competence [Bacillus mycoides
Rock1-4]
gi|228764276|gb|EEM13154.1| Negative regulator of genetic competence [Bacillus mycoides
Rock3-17]
Length = 811
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|383782938|ref|YP_005467505.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
gi|381376171|dbj|BAL92989.1| putative ATPase associated with various cellular activities
[Actinoplanes missouriensis 431]
Length = 840
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|386852989|ref|YP_006271002.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
gi|359840493|gb|AEV88934.1| Chaperone protein clpB [Actinoplanes sp. SE50/110]
Length = 840
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|453364329|dbj|GAC79902.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
malaquae NBRC 108250]
Length = 848
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|296271367|ref|YP_003653999.1| ATPase AAA-2 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296094154|gb|ADG90106.1| ATPase AAA-2 domain protein [Thermobispora bispora DSM 43833]
Length = 834
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 SAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|261337923|ref|ZP_05965807.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
gi|270277412|gb|EFA23266.1| negative regulator of genetic competence ClpC/MecB [Bifidobacterium
gallicum DSM 20093]
Length = 856
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK L + GVTL R + +++GKG
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASMGVTLDDTRKQVEEMIGKG---T 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 AAPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKM 127
>gi|228989289|ref|ZP_04149281.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
gi|228770442|gb|EEM19014.1| Negative regulator of genetic competence [Bacillus pseudomycoides
DSM 12442]
Length = 811
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|443294551|ref|ZP_21033645.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
gi|385882023|emb|CCH21911.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Micromonospora lupini str.
Lupac 08]
Length = 847
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|334335989|ref|YP_004541141.1| ATPase AAA-2 domain-containing protein [Isoptericola variabilis
225]
gi|334106357|gb|AEG43247.1| ATPase AAA-2 domain protein [Isoptericola variabilis 225]
Length = 855
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDGVRTQVTEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L +G
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLTKMGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLTKMGADLNKVRQQVIQLL 142
>gi|383777623|ref|YP_005462189.1| putative ATP-dependent Clp protease ATP-binding subunit
[Actinoplanes missouriensis 431]
gi|381370855|dbj|BAL87673.1| putative ATP-dependent Clp protease ATP-binding subunit
[Actinoplanes missouriensis 431]
Length = 763
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AA+ L + G+TL +VR++ I+G+G
Sbjct: 15 LAQEEARLLNHNYIGTEHVLLGLVREGEGVAARSLESLGITLDRVREQVEAIIGQGQ--L 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+ H P T A++V++ ++ L+ G++ + +LLG+ E D ++L +
Sbjct: 73 PASGHIPFTPRAKKVLEISLREALQLGHN-YIGTEHILLGLIREGDGVAVQVLTRM 127
>gi|289763775|ref|ZP_06523153.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis GM 1503]
gi|289711281|gb|EFD75297.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis GM 1503]
Length = 686
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|284989236|ref|YP_003407790.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
DSM 43160]
gi|284062481|gb|ADB73419.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
Length = 841
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|381208304|ref|ZP_09915375.1| ATP-dependent Clp protease [Lentibacillus sp. Grbi]
Length = 810
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L + G+ + K++ E K++G G
Sbjct: 16 LSQEEAVRLGHNNIGTEHILLGLVREGNGIAAKALESLGLEVTKIQQEVEKLIGTGKQPM 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++V++ + D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVVELSQDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|229083400|ref|ZP_04215749.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
gi|228699909|gb|EEL52545.1| Negative regulator of genetic competence [Bacillus cereus Rock3-44]
Length = 811
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEMS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|319948880|ref|ZP_08022993.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
gi|319437482|gb|EFV92489.1| ATPase AAA-2 domain-containing protein [Dietzia cinnamea P4]
Length = 883
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQLL 142
>gi|242620119|ref|YP_003002123.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
gi|239997364|gb|ACS36887.1| ATP-dependent clp protease ATP-binding subunit [Aureococcus
anophagefferens]
Length = 846
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R+L H GTE IL+G++ E +A K L GVTL + R E +I+G+G F
Sbjct: 15 LSQEESRRLGHNFVGTEQILLGLIGENGGVAYKVLRTFGVTLREARTEVERIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P T A+RV++ A++ G+ G + +LL + E G ++L LG
Sbjct: 75 AV--EIPFTPRAKRVLEIAIEEARDLGH-GYIGTEHVLLALLEEEVGVGVRVLQQLGL 129
>gi|379734094|ref|YP_005327599.1| putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
gi|378781900|emb|CCG01552.1| Putative ATP-dependent Clp protease ATP-binding subunit
[Blastococcus saxobsidens DD2]
Length = 842
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|305680627|ref|ZP_07403435.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
gi|305660158|gb|EFM49657.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Corynebacterium matruchotii ATCC 14266]
Length = 890
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGQGT--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|117927429|ref|YP_871980.1| ATPase [Acidothermus cellulolyticus 11B]
gi|117647892|gb|ABK51994.1| ATPase AAA-2 domain protein [Acidothermus cellulolyticus 11B]
Length = 839
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
>gi|389862461|ref|YP_006364701.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
gi|388484664|emb|CCH86202.1| ATP-dependent Clp protease ATP-binding subunit [Modestobacter
marinus]
Length = 847
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|258651101|ref|YP_003200257.1| ATPase AAA-2 domain-containing protein [Nakamurella multipartita
DSM 44233]
gi|258554326|gb|ACV77268.1| ATPase AAA-2 domain protein [Nakamurella multipartita DSM 44233]
Length = 846
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRAQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
SP H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QSPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|395237684|ref|ZP_10415722.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|423351385|ref|ZP_17329036.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
gi|394487003|emb|CCI83810.1| putative ATP-dependent Clp protease ATP-binding subunit [Turicella
otitidis ATCC 51513]
gi|404386569|gb|EJZ81723.1| hypothetical protein HMPREF9719_01331 [Turicella otitidis ATCC
51513]
Length = 925
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDDVRKEVEDIIGQGS--E 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 73 SQSGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLGADL 131
Query: 121 EKAKE 125
++ ++
Sbjct: 132 QRVRQ 136
>gi|255326112|ref|ZP_05367199.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
gi|255296823|gb|EET76153.1| negative regulator of genetic competence ClpC/mecB [Rothia
mucilaginosa ATCC 25296]
Length = 851
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG + A+ L + GVTL VR++ IVG G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVREQVQDIVGPG---- 70
Query: 61 FSPEHP----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P+ P P T A++V++ ++ ++ N G + +LLG+ + +++L L
Sbjct: 71 --PQAPNGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRANEGVANQVLVKL 127
Query: 117 GFSDEKAKE--LESLSSEPGS 135
G ++ ++ +S PG+
Sbjct: 128 GAEPAAVRQAVMDLISGYPGN 148
>gi|377565955|ref|ZP_09795231.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
gi|377526869|dbj|GAB40396.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
NBRC 100414]
Length = 847
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|345021357|ref|ZP_08784970.1| ATP-dependent Clp protease [Ornithinibacillus scapharcae TW25]
Length = 808
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L + G+ + K+++E K++G G
Sbjct: 16 LSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALESLGLEVSKIQEEVEKLIGTGKQPM 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++V++ + D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVVELSQDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|262200860|ref|YP_003272068.1| ATPase AAA [Gordonia bronchialis DSM 43247]
gi|262084207|gb|ACY20175.1| ATPase AAA-2 domain protein [Gordonia bronchialis DSM 43247]
Length = 848
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|159037791|ref|YP_001537044.1| ATPase [Salinispora arenicola CNS-205]
gi|157916626|gb|ABV98053.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 836
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
+ ++
Sbjct: 131 LNRVRQ 136
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|452958959|gb|EME64301.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
decaplanina DSM 44594]
Length = 852
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|330470478|ref|YP_004408221.1| ATPase aaa-2 domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813449|gb|AEB47621.1| atpase aaa-2 domain protein [Verrucosispora maris AB-18-032]
Length = 846
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|283457250|ref|YP_003361820.1| ATPase [Rothia mucilaginosa DY-18]
gi|283133235|dbj|BAI64000.1| ATPase with chaperone activity, ATP-binding subunit [Rothia
mucilaginosa DY-18]
Length = 856
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG + A+ L + GVTL VR++ IVG G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVREQVQDIVGPG---- 70
Query: 61 FSPEHP----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P+ P P T A++V++ ++ ++ N G + +LLG+ + +++L L
Sbjct: 71 --PQAPNGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRANEGVANQVLVKL 127
Query: 117 GFSDEKAKE--LESLSSEPGS 135
G ++ ++ +S PG+
Sbjct: 128 GAEPAAVRQAVMDLISGYPGN 148
>gi|302870292|ref|YP_003838929.1| ATPase AAA-2 domain-containing protein [Micromonospora aurantiaca
ATCC 27029]
gi|315503432|ref|YP_004082319.1| ATPase AAA-2 domain-containing protein [Micromonospora sp. L5]
gi|302573151|gb|ADL49353.1| ATPase AAA-2 domain protein [Micromonospora aurantiaca ATCC 27029]
gi|315410051|gb|ADU08168.1| ATPase AAA-2 domain protein [Micromonospora sp. L5]
Length = 845
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|225022124|ref|ZP_03711316.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
gi|224945057|gb|EEG26266.1| hypothetical protein CORMATOL_02157 [Corynebacterium matruchotii
ATCC 33806]
Length = 890
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G+G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGQGT--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|409388485|ref|ZP_11240462.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
gi|403201559|dbj|GAB83696.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rubripertincta NBRC 101908]
Length = 848
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|288920479|ref|ZP_06414787.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
gi|288348131|gb|EFC82400.1| ATPase AAA-2 domain protein [Frankia sp. EUN1f]
Length = 834
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPGSVD 137
+ ++ ++ LS G D
Sbjct: 131 LNRVRQQVIQLLSGYQGKGD 150
>gi|118472509|ref|YP_890312.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399990311|ref|YP_006570661.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
gi|118173796|gb|ABK74692.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
smegmatis str. MC2 155]
gi|399234873|gb|AFP42366.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
smegmatis str. MC2 155]
Length = 848
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|452960301|gb|EME65629.1| DNA binding ATP-dependent peptidase [Rhodococcus ruber BKS 20-38]
Length = 841
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|404424419|ref|ZP_11006001.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
gi|403651405|gb|EJZ06539.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
fortuitum subsp. fortuitum DSM 46621]
Length = 842
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|145596784|ref|YP_001161081.1| ATPase [Salinispora tropica CNB-440]
gi|145306121|gb|ABP56703.1| ATPase AAA-2 domain protein [Salinispora tropica CNB-440]
Length = 844
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
+ ++
Sbjct: 131 LNRVRQ 136
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|71842249|ref|YP_277337.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|52547750|gb|AAU81910.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|60101492|gb|AAX13836.1| Clp protease ATP binding subunit [Emiliania huxleyi]
gi|336286162|gb|AEI29498.1| Clp protease ATP binding subunit [Emiliania huxleyi]
Length = 817
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT + K L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIGPKILKSMGVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P T A+R+++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRILELSLEEARQLGHN-YIGTEHLLLGLIREGEGVAARVLENL 127
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+G++ EG +AA+ L V L KVR + ++ +G+
Sbjct: 94 EARQLGHNYIGTEHLLLGLIREGEGVAARVLENLEVDLSKVRSQIIRSLGE 144
>gi|407641646|ref|YP_006805405.1| Clp protease [Nocardia brasiliensis ATCC 700358]
gi|407304530|gb|AFT98430.1| Clp protease [Nocardia brasiliensis ATCC 700358]
Length = 772
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
+ ++
Sbjct: 131 LNRVRQ 136
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|317123796|ref|YP_004097908.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587884|gb|ADU47181.1| ATPase AAA-2 domain protein [Intrasporangium calvum DSM 43043]
Length = 874
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR + +I+G+G
Sbjct: 15 LAQEEARLLNHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVRAQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V+++++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 72 QAPTGHIPFTPRAKKVLEYSLREALQLGHS-YIGTEHILLGLIREGEGVAAQVLVKLGAE 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHSYIGTEHILLGLIREGEGVAAQVLVKLGAELNKVRQQVIQLL 142
>gi|159040200|ref|YP_001539453.1| ATPase [Salinispora arenicola CNS-205]
gi|157919035|gb|ABW00463.1| ATPase AAA-2 domain protein [Salinispora arenicola CNS-205]
Length = 844
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
+ ++
Sbjct: 131 LNRVRQ 136
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831]
gi|54035854|sp|Q8EU05.1|CLPB_OCEIH RecName: Full=Chaperone protein ClpB
gi|22775771|dbj|BAC12049.1| ATP-dependent Clp protease (ATP-binding subunit) [Oceanobacillus
iheyensis HTE831]
Length = 809
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L + G+ + K+++E K++G G
Sbjct: 16 LSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQEEVEKLIGVGKQPT 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S + P A++V++ + D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QSIHYTP---RAKKVVELSQDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|407978585|ref|ZP_11159414.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
gi|407414781|gb|EKF36407.1| class III stress response-related ATPase [Bacillus sp. HYC-10]
Length = 811
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQ--E 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++V + ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 74 VSQAIPHYTPRAKKVTELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 147
>gi|52145135|ref|YP_081693.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
gi|51978604|gb|AAU20154.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus E33L]
Length = 811
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|407277667|ref|ZP_11106137.1| DNA binding ATP-dependent peptidase [Rhodococcus sp. P14]
Length = 841
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|402299365|ref|ZP_10818976.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
gi|401725403|gb|EJS98688.1| class III stress response-related ATPase [Bacillus alcalophilus
ATCC 27647]
Length = 813
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++GKG
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGSEKIQKEVETLIGKGQEGS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 KTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDF 58
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEV 147
>gi|374610138|ref|ZP_09682931.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
gi|373551169|gb|EHP77798.1| ATPase AAA-2 domain protein [Mycobacterium tusciae JS617]
Length = 851
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|255087254|ref|XP_002505550.1| predicted protein [Micromonas sp. RCC299]
gi|226520820|gb|ACO66808.1| predicted protein [Micromonas sp. RCC299]
Length = 886
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE I++G++ EGT +AAK L + G++L + R E KI+G+G F
Sbjct: 62 LAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEARIEVEKIIGRGSGFV 121
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ A++ + G++
Sbjct: 122 AV--EIPFTPRAKRVLELALEEARQLGHN 148
>gi|145356586|ref|XP_001422509.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
gi|144582752|gb|ABP00826.1| chaperone, Hsp100 family, ClpC-type [Ostreococcus lucimarinus
CCE9901]
Length = 840
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE I++G++ EGT +AAK L + G++L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ A++ + G++
Sbjct: 75 AV--EIPFTPRAKRVLELALEEARQLGHN 101
>gi|404213401|ref|YP_006667576.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
gi|403644200|gb|AFR47440.1| ATPases with chaperone activity, ATP-binding subunit [Gordonia sp.
KTR9]
Length = 846
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|303288740|ref|XP_003063658.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454726|gb|EEH52031.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 839
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE I++G++ EGT +AAK L + G++L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ A++ + G++
Sbjct: 75 AV--EIPFTPRAKRVLELALEEARQLGHN 101
>gi|377561326|ref|ZP_09790784.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
gi|377521514|dbj|GAB35949.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
otitidis NBRC 100426]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|157690869|ref|YP_001485331.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194017457|ref|ZP_03056068.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
gi|157679627|gb|ABV60771.1| class III stress response-related ATPase [Bacillus pumilus
SAFR-032]
gi|194010729|gb|EDW20300.1| negative regulator of genetic competence ClpC/mecB [Bacillus
pumilus ATCC 7061]
Length = 811
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQ--E 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++V + ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 74 VSQAIPHYTPRAKKVTELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 147
>gi|377569546|ref|ZP_09798707.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
gi|377533283|dbj|GAB43872.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
terrae NBRC 100016]
Length = 846
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|343925825|ref|ZP_08765340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
gi|343764176|dbj|GAA12266.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
alkanivorans NBRC 16433]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|336180205|ref|YP_004585580.1| ATPase AAA-2 domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334861185|gb|AEH11659.1| ATPase AAA-2 domain protein [Frankia symbiont of Datisca glomerata]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPGSVD 137
+ ++ ++ LS G D
Sbjct: 131 LNRVRQQVIQLLSGYQGKGD 150
>gi|111226012|ref|YP_716806.1| ATP-dependent protease [Frankia alni ACN14a]
gi|111153544|emb|CAJ65303.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
with DnaK, DnaJ, and GrpE [Frankia alni ACN14a]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGD 57
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++ GKG+
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGE 150
>gi|86743058|ref|YP_483458.1| ATPase [Frankia sp. CcI3]
gi|86569920|gb|ABD13729.1| ATPase AAA-2 [Frankia sp. CcI3]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGD 57
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++ GKG+
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGE 150
>gi|392945929|ref|ZP_10311571.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
gi|392289223|gb|EIV95247.1| ATPase with chaperone activity, ATP-binding subunit [Frankia sp.
QA3]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGD 57
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++ GKG+
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGE 150
>gi|424827469|ref|ZP_18252273.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
gi|365980083|gb|EHN16120.1| negative regulator of genetic competence MecB/ClpC [Clostridium
sporogenes PA 3679]
Length = 811
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +G+T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIED-GVAKQLLNNSGITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ K
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDVERLK 136
Query: 125 E--LESLSSE 132
+ +++LS E
Sbjct: 137 KELIKNLSGE 146
>gi|400535256|ref|ZP_10798793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
gi|400331614|gb|EJO89110.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
colombiense CECT 3035]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|451339451|ref|ZP_21909968.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
gi|449417946|gb|EMD23570.1| ATP-dependent Clp protease [Amycolatopsis azurea DSM 43854]
Length = 852
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|433650481|ref|YP_007295483.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
gi|433300258|gb|AGB26078.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
smegmatis JS623]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|389573541|ref|ZP_10163615.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
gi|388426856|gb|EIL84667.1| negative regulator of genetic competence ClpC/mecB [Bacillus sp. M
2-6]
Length = 811
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQ--E 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++V + ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 74 VSQAIPHYTPRAKKVTELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 147
>gi|422324030|ref|ZP_16405067.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
gi|353344624|gb|EHB88930.1| ATP-dependent Clp protease ATP-binding subunit [Rothia mucilaginosa
M508]
Length = 855
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 13/141 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG + A+ L + GVTL VR++ IVG G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGIGARALESLGVTLNAVREQVQDIVGPG---- 70
Query: 61 FSPEHP----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P+ P P T A++V++ ++ ++ N G + +LLG+ + +++L L
Sbjct: 71 --PQAPNGHIPFTPRAKKVLELSMREAIQL-NHGYIGTEHILLGMVRANEGVANQVLVKL 127
Query: 117 GFSDEKAKE--LESLSSEPGS 135
G ++ ++ +S PG+
Sbjct: 128 GAEPAAVRQAVMDLISGYPGN 148
>gi|169627650|ref|YP_001701299.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus ATCC 19977]
gi|420862333|ref|ZP_15325729.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|420866918|ref|ZP_15330305.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|420876221|ref|ZP_15339597.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|420913205|ref|ZP_15376517.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|420919524|ref|ZP_15382823.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|420925292|ref|ZP_15388581.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|420964834|ref|ZP_15428051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
gi|420975640|ref|ZP_15438826.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|420981019|ref|ZP_15444192.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|421005578|ref|ZP_15468696.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|421011064|ref|ZP_15474163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|421016167|ref|ZP_15479237.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|421021609|ref|ZP_15484661.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|421027390|ref|ZP_15490429.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|421039150|ref|ZP_15502161.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|421046568|ref|ZP_15509568.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|169239617|emb|CAM60645.1| Probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus]
gi|392067696|gb|EIT93544.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RB]
gi|392075249|gb|EIU01083.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0726-RA]
gi|392077494|gb|EIU03325.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0303]
gi|392115199|gb|EIU40968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-R]
gi|392135367|gb|EIU61107.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-S]
gi|392140949|gb|EIU66675.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-1108]
gi|392173585|gb|EIU99252.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0212]
gi|392176817|gb|EIV02475.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0728-R]
gi|392204370|gb|EIV29958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0119-R]
gi|392213495|gb|EIV39051.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-R]
gi|392217460|gb|EIV42996.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0122-S]
gi|392217638|gb|EIV43172.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0731]
gi|392227364|gb|EIV52878.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-R]
gi|392233350|gb|EIV58849.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-R]
gi|392236021|gb|EIV61519.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0116-S]
gi|392258368|gb|EIV83814.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0810-R]
Length = 844
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|453073740|ref|ZP_21976539.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
gi|452765766|gb|EME24020.1| DNA binding ATP-dependent peptidase [Rhodococcus triatomae BKS
15-14]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|441508083|ref|ZP_20990008.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
gi|441448010|dbj|GAC47969.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
aichiensis NBRC 108223]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|404443896|ref|ZP_11009061.1| ATPase [Mycobacterium vaccae ATCC 25954]
gi|403654831|gb|EJZ09729.1| ATPase [Mycobacterium vaccae ATCC 25954]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|363419559|ref|ZP_09307659.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
gi|359737034|gb|EHK85969.1| DNA binding ATP-dependent peptidase [Rhodococcus pyridinivorans
AK37]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|296392867|ref|YP_003657751.1| ATPase AAA [Segniliparus rotundus DSM 44985]
gi|296180014|gb|ADG96920.1| ATPase AAA-2 domain protein [Segniliparus rotundus DSM 44985]
Length = 842
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QGPSVHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|302527020|ref|ZP_07279362.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302435915|gb|EFL07731.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 831
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLL 142
>gi|403721633|ref|ZP_10944535.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
gi|403207043|dbj|GAB88866.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
rhizosphera NBRC 16068]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|315446238|ref|YP_004079117.1| chaperone ATPase [Mycobacterium gilvum Spyr1]
gi|315264541|gb|ADU01283.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
gilvum Spyr1]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|120406306|ref|YP_956135.1| ATPase [Mycobacterium vanbaalenii PYR-1]
gi|119959124|gb|ABM16129.1| ATPase AAA-2 domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|359766456|ref|ZP_09270267.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|378719673|ref|YP_005284562.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
gi|359316093|dbj|GAB23100.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
polyisoprenivorans NBRC 16320]
gi|375754376|gb|AFA75196.1| putative ATP-dependent Clp protease, ATP-binding subunit ClpC
[Gordonia polyisoprenivorans VH2]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|359773810|ref|ZP_09277200.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
gi|359309092|dbj|GAB19978.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
effusa NBRC 100432]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|312138070|ref|YP_004005406.1| DNA binding ATP-dependent peptidase [Rhodococcus equi 103S]
gi|311887409|emb|CBH46721.1| putative DNA binding ATP-dependent peptidase [Rhodococcus equi
103S]
Length = 851
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|126437706|ref|YP_001073397.1| ATPase [Mycobacterium sp. JLS]
gi|126237506|gb|ABO00907.1| ATPase AAA-2 domain protein [Mycobacterium sp. JLS]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|145222022|ref|YP_001132700.1| ATPase [Mycobacterium gilvum PYR-GCK]
gi|145214508|gb|ABP43912.1| ATPase AAA-2 domain protein [Mycobacterium gilvum PYR-GCK]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|158312055|ref|YP_001504563.1| ATPase [Frankia sp. EAN1pec]
gi|158107460|gb|ABW09657.1| ATPase AAA-2 domain protein [Frankia sp. EAN1pec]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
>gi|412985529|emb|CCO18975.1| predicted protein [Bathycoccus prasinos]
Length = 944
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE I++G++ EGT +AAK L + G++L + R E KI+G+G F
Sbjct: 120 LAQEEARRLGHNFVGTEQIMLGLIGEGTGIAAKVLKSMGISLKEARVEVEKIIGRGSGFV 179
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ A++ + G++
Sbjct: 180 AV--EIPFTPRAKRVLELALEEARQLGHN 206
>gi|324998065|ref|ZP_08119177.1| putative ATP-dependent Clp protease [Pseudonocardia sp. P1]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|312194050|ref|YP_004014111.1| ATPase AAA-2 domain-containing protein [Frankia sp. EuI1c]
gi|311225386|gb|ADP78241.1| ATPase AAA-2 domain protein [Frankia sp. EuI1c]
Length = 836
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPGSVD 137
+ ++ ++ LS G D
Sbjct: 131 LNRVRQQVIQLLSGYQGKGD 150
>gi|408501309|ref|YP_006865228.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
gi|408466133|gb|AFU71662.1| transporter, probably Type VI secretion system, EvpA-P
[Bifidobacterium asteroides PRL2011]
Length = 882
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE +L+G++ EG +AAK + GV L R + +++GKG+
Sbjct: 15 LAQEEARTLQHNYIGTEHLLLGLIREGDGVAAKAQASKGVELDATRKQVEEMIGKGNAV- 73
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +G
Sbjct: 74 --PNGHIPFTPHARQVLELSLREALQLGHS-YIGTEHILLGLIREGEGVGTQVLIKMG 128
>gi|108801719|ref|YP_641916.1| ATPase [Mycobacterium sp. MCS]
gi|119870870|ref|YP_940822.1| ATPase [Mycobacterium sp. KMS]
gi|108772138|gb|ABG10860.1| ATPase AAA-2 [Mycobacterium sp. MCS]
gi|119696959|gb|ABL94032.1| ATPase AAA-2 domain protein [Mycobacterium sp. KMS]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|441512961|ref|ZP_20994794.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
gi|441452336|dbj|GAC52755.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amicalis NBRC 100051]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|358457648|ref|ZP_09167865.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
gi|357079193|gb|EHI88635.1| ATPase AAA-2 domain protein [Frankia sp. CN3]
Length = 836
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGD 57
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++ GKG+
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKGE 150
>gi|325675027|ref|ZP_08154714.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
gi|325554613|gb|EGD24288.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
equi ATCC 33707]
Length = 851
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 832
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G+L EG +AA L + G+ L +VR ++VGKG + +
Sbjct: 19 EALRLGHDVIGTEHILLGLLAEGDGVAAHVLMSLGIDLDEVRKRVEQLVGKGQ----AKD 74
Query: 65 HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDE 121
P PL+ A+RV+D A+ G V +LLG+ +E + ++L ++G +
Sbjct: 75 KPIDLPLSPRAKRVLDLAMREARNMG-VNYVGTEHILLGLLAEGEGIAAQVLTSMGLDMQ 133
Query: 122 K 122
K
Sbjct: 134 K 134
>gi|229494287|ref|ZP_04388050.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|453067540|ref|ZP_21970827.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
gi|226183250|dbj|BAH31354.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Rhodococcus erythropolis PR4]
gi|229318649|gb|EEN84507.1| ATPase family protein protein [Rhodococcus erythropolis SK121]
gi|452766831|gb|EME25074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
qingshengii BKS 20-40]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|418046563|ref|ZP_12684651.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
gi|353192233|gb|EHB57737.1| ATPase AAA-2 domain protein [Mycobacterium rhodesiae JS60]
Length = 845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|365868512|ref|ZP_09408063.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|397678519|ref|YP_006520054.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense str. GO 06]
gi|418252108|ref|ZP_12878120.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|419710796|ref|ZP_14238260.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|419713561|ref|ZP_14240985.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|420878246|ref|ZP_15341613.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|420935189|ref|ZP_15398459.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|420950195|ref|ZP_15413442.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|420995114|ref|ZP_15458260.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|420996080|ref|ZP_15459223.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|421047351|ref|ZP_15510349.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353448368|gb|EHB96773.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus 47J26]
gi|364000603|gb|EHM21801.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|382939686|gb|EIC64012.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M93]
gi|382946259|gb|EIC70545.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus M94]
gi|392083155|gb|EIU08980.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0304]
gi|392146696|gb|EIU72417.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-152-0914]
gi|392165281|gb|EIU90968.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0626]
gi|392181216|gb|EIV06868.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0307]
gi|392191900|gb|EIV17525.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-R]
gi|392243903|gb|EIV69386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense CCUG 48898]
gi|395456784|gb|AFN62447.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense str. GO 06]
Length = 844
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|381163390|ref|ZP_09872620.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
gi|418462066|ref|ZP_13033124.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|359737814|gb|EHK86734.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea SZMC 14600]
gi|379255295|gb|EHY89221.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora azurea NA-128]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|134097027|ref|YP_001102688.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133909650|emb|CAL99762.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 853
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|90994524|ref|YP_537014.1| Clp protease ATP binding subunit [Pyropia yezoensis]
gi|122194672|sp|Q1XDF4.1|CLPC_PORYE RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|90819088|dbj|BAE92457.1| Clp protease ATP binding subunit [Pyropia yezoensis]
Length = 821
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AA+ L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LL+G+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLMGLVREGEGVAARVLENLA 128
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR+L H GTE +LMG++ EG +AA+ L V + +R E ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLMGLVREGEGVAARVLENLAVDVSSIRAEVIQMLGEN 145
>gi|378787369|gb|AFC40000.1| Clp protease ATP binding subunit [Porphyra umbilicalis]
Length = 821
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AA+ L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LL+G+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLMGLVREGEGVAARVLENLA 128
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR+L H GTE +LMG++ EG +AA+ L V + +R E ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLMGLVREGEGVAARVLENLAVDVSSIRAEVIQMLGEN 145
>gi|384567728|ref|ZP_10014832.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
gi|384523582|gb|EIF00778.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora glauca K62]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|359426609|ref|ZP_09217692.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
gi|358238174|dbj|GAB07274.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
amarae NBRC 15530]
Length = 845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|317507816|ref|ZP_07965517.1| ATPase [Segniliparus rugosus ATCC BAA-974]
gi|316253858|gb|EFV13227.1| ATPase [Segniliparus rugosus ATCC BAA-974]
Length = 842
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QGPSVHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|291303744|ref|YP_003515022.1| ATPase AAA-2 domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290572964|gb|ADD45929.1| ATPase AAA-2 domain protein [Stackebrandtia nassauensis DSM 44728]
Length = 854
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLIKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|11465798|ref|NP_053942.1| Clp protease ATP binding subunit [Porphyra purpurea]
gi|1705925|sp|P51332.1|CLPC_PORPU RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1276798|gb|AAC08218.1| Clp protease ATP binding subunit (chloroplast) [Porphyra purpurea]
Length = 821
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AA+ L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LL+G+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLMGLVREGEGVAARVLENLA 128
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR+L H GTE +LMG++ EG +AA+ L V + +R E ++++G+
Sbjct: 94 EARQLGHNYIGTEHLLMGLVREGEGVAARVLENLAVDVSSIRAEVIQMLGEN 145
>gi|54022379|ref|YP_116621.1| Clp protease [Nocardia farcinica IFM 10152]
gi|54013887|dbj|BAD55257.1| putative Clp protease [Nocardia farcinica IFM 10152]
Length = 851
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|375102873|ref|ZP_09749136.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
gi|374663605|gb|EHR63483.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora cyanea NA-134]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|339633595|ref|YP_004725237.1| ATP-dependent protease ATP-binding subunit CLPC1 [Mycobacterium
africanum GM041182]
gi|339332951|emb|CCC28678.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium africanum GM041182]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|111021395|ref|YP_704367.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|384107232|ref|ZP_10008133.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|419966758|ref|ZP_14482676.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
gi|424854680|ref|ZP_18279038.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|110820925|gb|ABG96209.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
jostii RHA1]
gi|356664727|gb|EHI44820.1| ATP-dependent chaperone ClpB [Rhodococcus opacus PD630]
gi|383832621|gb|EID72092.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
imtechensis RKJ300]
gi|414567867|gb|EKT78642.1| ATP-binding subunit of ATP-dependent Clp protease [Rhodococcus
opacus M213]
Length = 845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|41406559|ref|NP_959395.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394908|gb|AAS02778.1| ClpC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 843
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|348173006|ref|ZP_08879900.1| putative ATP-dependent Clp protease [Saccharopolyspora spinosa NRRL
18395]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|15843209|ref|NP_338246.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
gi|13883563|gb|AAK48060.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Mycobacterium
tuberculosis CDC1551]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|15612666|ref|NP_240969.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans
C-125]
Length = 813
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++GKG
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGPEKIQKEVETLIGKGQDGA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 KTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|357152345|ref|XP_003576089.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 943
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E R+L H T G+E IL+G++ EGT +AA+ L + G+ L R E K +G+G
Sbjct: 114 LAQEETRRLGHNTVGSEQILLGLIGEGTGIAARALKSAGLNLKDARVEVEKALGRGTGLI 173
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKIL 113
P P T A++VI+++ + + G++ + + LLLG+ E D IL
Sbjct: 174 --PVEIPFTASAKKVIEFSAEESRQLGHN-YIGSEHLLLGLVREDDGAALIIL 223
>gi|296166661|ref|ZP_06849087.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295897996|gb|EFG77576.1| ATP-dependent protease, ATPase subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 844
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|118619352|ref|YP_907684.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
gi|118571462|gb|ABL06213.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
ulcerans Agy99]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|31794773|ref|NP_857266.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis AF2122/97]
gi|57117131|ref|YP_177995.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|121639516|ref|YP_979740.1| ATP-dependent Clp protease ATP-binding subunit clpC [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148663461|ref|YP_001284984.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148824802|ref|YP_001289556.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|167968197|ref|ZP_02550474.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis H37Ra]
gi|224992013|ref|YP_002646702.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253800637|ref|YP_003033638.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289445190|ref|ZP_06434934.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289747433|ref|ZP_06506811.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|294993716|ref|ZP_06799407.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis 210]
gi|297636272|ref|ZP_06954052.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN 4207]
gi|297733266|ref|ZP_06962384.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN R506]
gi|306791193|ref|ZP_07429495.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|307086394|ref|ZP_07495507.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|313660596|ref|ZP_07817476.1| probable ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis KZN V2475]
gi|340628561|ref|YP_004747013.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|375297863|ref|YP_005102130.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|378773377|ref|YP_005173110.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|383309326|ref|YP_005362137.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|385992823|ref|YP_005911121.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|385996461|ref|YP_005914759.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|386000382|ref|YP_005918681.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|392388189|ref|YP_005309818.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|392434075|ref|YP_006475119.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|397675551|ref|YP_006517086.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|422814849|ref|ZP_16863067.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|424806159|ref|ZP_18231590.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|424945484|ref|ZP_18361180.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|433628738|ref|YP_007262367.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|433632691|ref|YP_007266319.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|433636704|ref|YP_007270331.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|433643788|ref|YP_007289547.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|449065710|ref|YP_007432793.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
gi|61221148|sp|P0A522.1|CLPC_MYCTU RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|61221149|sp|P0A523.1|CLPC_MYCBO RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|31620370|emb|CAD95813.1| PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPC
[Mycobacterium bovis AF2122/97]
gi|121495164|emb|CAL73650.1| Probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148507613|gb|ABQ75422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Ra]
gi|148723329|gb|ABR07954.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis F11]
gi|224775128|dbj|BAH27934.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253322140|gb|ACT26743.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 1435]
gi|289418148|gb|EFD15349.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis CPHL_A]
gi|289687961|gb|EFD55449.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis 02_1987]
gi|308340222|gb|EFP29073.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu005]
gi|308364160|gb|EFP53011.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu012]
gi|323717705|gb|EGB26905.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CDC1551A]
gi|326905435|gb|EGE52368.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis W-148]
gi|328460368|gb|AEB05791.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 4207]
gi|339296415|gb|AEJ48526.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5079]
gi|339300016|gb|AEJ52126.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
tuberculosis CCDC5180]
gi|340006751|emb|CCC45939.1| putative ATP-dependent protease ATP-binding subunit CLPC1
[Mycobacterium canettii CIPT 140010059]
gi|341603537|emb|CCC66218.1| probable ATP-dependent clp proteasE ATP-binding subunit clpC
[Mycobacterium bovis BCG str. Moreau RDJ]
gi|344221429|gb|AEN02060.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
tuberculosis CTRI-2]
gi|356595698|gb|AET20927.1| Putative ATP-dependent Clp protease, ATP-binding subunit
[Mycobacterium bovis BCG str. Mexico]
gi|358229999|dbj|GAA43491.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis NCGM2209]
gi|378546740|emb|CCE39019.1| clpC1 [Mycobacterium tuberculosis UT205]
gi|379029983|dbj|BAL67716.1| ATP-dependent protease ATP-binding subunit [Mycobacterium
tuberculosis str. Erdman = ATCC 35801]
gi|380723279|gb|AFE18388.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium tuberculosis RGTB327]
gi|392055484|gb|AFM51042.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis KZN 605]
gi|395140456|gb|AFN51615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Mycobacterium
tuberculosis H37Rv]
gi|432156344|emb|CCK53602.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140060008]
gi|432160336|emb|CCK57659.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070008]
gi|432164284|emb|CCK61736.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070010]
gi|432168297|emb|CCK65831.1| Putative ATP-dependent Clp protease ATP-binding subunit ClpC1
[Mycobacterium canettii CIPT 140070017]
gi|440583104|emb|CCG13507.1| putative ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPC1
[Mycobacterium tuberculosis 7199-99]
gi|444897153|emb|CCP46419.1| Probable ATP-dependent protease ATP-binding subunit ClpC1
[Mycobacterium tuberculosis H37Rv]
gi|449034218|gb|AGE69645.1| ATP-dependent Clp protease ATP-binding subunit CLPC [Mycobacterium
bovis BCG str. Korea 1168P]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|383820312|ref|ZP_09975569.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
gi|383335314|gb|EID13745.1| chaperone ATPase [Mycobacterium phlei RIVM601174]
Length = 843
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|392418483|ref|YP_006455088.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
gi|390618259|gb|AFM19409.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
chubuense NBB4]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|256374490|ref|YP_003098150.1| ATPase AAA [Actinosynnema mirum DSM 43827]
gi|255918793|gb|ACU34304.1| ATPase AAA-2 domain protein [Actinosynnema mirum DSM 43827]
Length = 852
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYSG 147
>gi|383830025|ref|ZP_09985114.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
gi|383462678|gb|EID54768.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora xinjiangensis XJ-54]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|254823225|ref|ZP_05228226.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|427715740|ref|YP_007063734.1| ATPase [Calothrix sp. PCC 7507]
gi|427348176|gb|AFY30900.1| ATPase AAA-2 domain protein [Calothrix sp. PCC 7507]
Length = 815
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L GVTL R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLMGEGTGVAAKVLSELGVTLKDARREVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P P T + + + + G++ + +LLG+ + K+L LG
Sbjct: 75 --PPEIPFTPKVKSLFEQSFKEAHSLGHN-YINTEHVLLGLTEAGEGVAAKVLQNLG 128
>gi|443493153|ref|YP_007371300.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
gi|442585650|gb|AGC64793.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
liflandii 128FXT]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|379752482|ref|YP_005341154.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|379759922|ref|YP_005346319.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|387873864|ref|YP_006304168.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|443308784|ref|ZP_21038570.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
gi|378802698|gb|AFC46833.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-02]
gi|378807864|gb|AFC51998.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare MOTT-64]
gi|386787322|gb|AFJ33441.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
MOTT36Y]
gi|442763900|gb|ELR81899.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
H4Y]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|375139363|ref|YP_005000012.1| chaperone ATPase [Mycobacterium rhodesiae NBB3]
gi|359819984|gb|AEV72797.1| ATPase with chaperone activity, ATP-binding subunit [Mycobacterium
rhodesiae NBB3]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|302530766|ref|ZP_07283108.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
gi|302439661|gb|EFL11477.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLL 142
>gi|183985068|ref|YP_001853359.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
gi|183178394|gb|ACC43504.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
marinum M]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|385680704|ref|ZP_10054632.1| ATPase with chaperone activity, ATP-binding subunit [Amycolatopsis
sp. ATCC 39116]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|379745192|ref|YP_005336013.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
gi|378797556|gb|AFC41692.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
intracellulare ATCC 13950]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|375097571|ref|ZP_09743836.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
gi|374658304|gb|EHR53137.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora marina XMU15]
Length = 849
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|354612690|ref|ZP_09030634.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
gi|353222993|gb|EHB87286.1| ATPase AAA-2 domain protein [Saccharomonospora paurometabolica YIM
90007]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|331699829|ref|YP_004336068.1| ATPase [Pseudonocardia dioxanivorans CB1190]
gi|326954518|gb|AEA28215.1| ATPase AAA-2 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE--LESLSSEPG 134
+ ++ L+ LS G
Sbjct: 131 LNRVRQQVLQLLSGYQG 147
>gi|226363749|ref|YP_002781531.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
gi|226242238|dbj|BAH52586.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
opacus B4]
Length = 845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|257057497|ref|YP_003135329.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
gi|256587369|gb|ACU98502.1| ATPase with chaperone activity, ATP-binding subunit
[Saccharomonospora viridis DSM 43017]
Length = 851
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
>gi|298527075|ref|ZP_07014484.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298496869|gb|EFI32163.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 848
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|403737328|ref|ZP_10950162.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
gi|403192628|dbj|GAB76932.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Austwickia
chelonae NBRC 105200]
Length = 870
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR++ +I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQEIIGTGT--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQTVIQLL 142
>gi|298242789|ref|ZP_06966596.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
gi|297555843|gb|EFH89707.1| ATPase AAA-2 domain protein [Ktedonobacter racemifer DSM 44963]
Length = 843
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ +H GTE +L+G++ EG +AAK L GV L KVR I+G+GD
Sbjct: 20 LAQEEAQRFQHNYIGTEHLLLGLVREGEGVAAKVLANLGVELNKVRSAVEFIIGRGDRIV 79
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT A++VI+ AVD + + N + LLLG+ E + +L +LG +
Sbjct: 80 LG--EIGLTPRAKKVIELAVD-EARRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNL 136
Query: 121 EKAK 124
EK +
Sbjct: 137 EKVR 140
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ EG +AA L + GV L KVR ++++++ S
Sbjct: 99 EARRLNHHYIGTEHLLLGLVREGEGIAAGVLESLGVNLEKVRTQTIQVL--------SQS 150
Query: 65 HPPLTEDAQ 73
+PP DA+
Sbjct: 151 NPPHERDAK 159
>gi|302763781|ref|XP_002965312.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
gi|300167545|gb|EFJ34150.1| hypothetical protein SELMODRAFT_439163 [Selaginella moellendorffii]
Length = 937
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L + R E KI+G+G F
Sbjct: 117 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFV 176
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 177 AV--EIPFTPRAKRVLELSLEEARQLGHN 203
>gi|407475965|ref|YP_006789842.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
gi|407060044|gb|AFS69234.1| class III stress response-related ATPase [Exiguobacterium
antarcticum B7]
Length = 815
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEAVRLGHHNIGTEHILLGLVREGDGIAAKALTALGLSSDKIQMEVEALIGRGQDGA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V LLLG+ E + ++L LG S
Sbjct: 76 TTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHLLLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 SKARQ 136
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE +L+G++ EG +AA+ L G++L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHLLLGLIREGEGVAARVLNNLGISLSKARQQVLQLLGNSE 146
>gi|378549452|ref|ZP_09824668.1| hypothetical protein CCH26_05167 [Citricoccus sp. CH26A]
Length = 845
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESLSISLGAVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QTPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVIQLL 142
>gi|172056112|ref|YP_001812572.1| ATPase [Exiguobacterium sibiricum 255-15]
gi|171988633|gb|ACB59555.1| ATPase AAA-2 domain protein [Exiguobacterium sibiricum 255-15]
Length = 815
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LAQEEAVRLGHHNIGTEHILLGLVREGDGIAAKALTALGLSSDKIQMEVEALIGRGQDGA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V LLLG+ E + ++L LG S
Sbjct: 76 TTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHLLLGLIREGEGVAARVLNNLGISL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 SKARQ 136
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE +L+G++ EG +AA+ L G++L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHLLLGLIREGEGVAARVLNNLGISLSKARQQVLQLLGNSE 146
>gi|433602206|ref|YP_007034575.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
gi|407880059|emb|CCH27702.1| putative ATP-dependent Clp protease ATP-binding subunit
[Saccharothrix espanaensis DSM 44229]
Length = 856
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLL 142
>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
Length = 814
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L + G++ K++ E KI+G+G +
Sbjct: 20 EASRLGHSGIGTEHILLGLVREGDGIAAKALMSLGLSSEKIQREVEKIIGRGPGQGAAMT 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K G++ V +LLG+ E + ++L LG S KA+
Sbjct: 80 YTP---RAKKVIELSIDEARKLGHN-YVGTEHILLGLIREGEGVAARVLNNLGVSLPKAR 135
Query: 125 E 125
+
Sbjct: 136 Q 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G GD + E
Sbjct: 94 EARKLGHNYVGTEHILLGLIREGEGVAARVLNNLGVSLPKARQQVIQLLG-GDSAETNQE 152
Query: 65 H------PPLTEDAQRVIDWAVDHKL 84
+ P L A+ + A D KL
Sbjct: 153 NQQSANTPTLDSLARDLTQMARDGKL 178
>gi|260578411|ref|ZP_05846325.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
gi|258603433|gb|EEW16696.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium jeikeium ATCC 43734]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVRTEVKDIIGTGG--- 71
Query: 61 FSPEHP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
HP P T A++V++ A+ L+ G+ + +LLG+ E + ++L
Sbjct: 72 ----HPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVK 126
Query: 116 LG 117
LG
Sbjct: 127 LG 128
>gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
gi|56908137|dbj|BAD62664.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus
clausii KSM-K16]
Length = 818
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ K++ E +VGKG
Sbjct: 16 LSQEEAIRLSHHNIGTEHILLGLIREGEGIAAKALQQLGLGSEKLQKEVETLVGKGQEGQ 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
S P T A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 KSIHSTPHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVS 134
Query: 120 DEKAKE--LESLSSEPG 134
KA++ L+ L S G
Sbjct: 135 LNKARQQVLQLLGSNEG 151
>gi|383826095|ref|ZP_09981237.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
gi|383333857|gb|EID12305.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium
xenopi RIVM700367]
Length = 850
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|308175906|ref|YP_003915312.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
gi|307743369|emb|CBT74341.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter
arilaitensis Re117]
Length = 840
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AAK L + ++L VR++ +I+GKG
Sbjct: 18 LAQEEARMLNHNYIGTEHLLLGLIHEGDGVAAKALESLNISLGAVREQVQEIIGKGQ--- 74
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 75 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 131
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 97 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQQVIQLL 145
>gi|334564013|ref|ZP_08517004.1| ATP-dependent Clp protease [Corynebacterium bovis DSM 20582]
Length = 838
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRTEVEDIIGSGG--- 71
Query: 61 FSPEHP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
HP P T A++V++ A+ L+ G+ + +LLG+ E + ++L
Sbjct: 72 ----HPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVK 126
Query: 116 LG--FSDEKAKELESLSSEPGS 135
LG S + + ++ LS G+
Sbjct: 127 LGADLSRVRQQVIQLLSGYEGA 148
>gi|312109233|ref|YP_003987549.1| ATPase AAA [Geobacillus sp. Y4.1MC1]
gi|336233627|ref|YP_004586243.1| ATPase AAA-2 domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214334|gb|ADP72938.1| ATPase AAA-2 domain protein [Geobacillus sp. Y4.1MC1]
gi|335360482|gb|AEH46162.1| ATPase AAA-2 domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 812
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 17 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQKEVESLIGRGHEVS 76
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++V++ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 77 HTIHYTP---RAKKVLELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 147
>gi|168053476|ref|XP_001779162.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669421|gb|EDQ56008.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L + R E KI+G+G F
Sbjct: 115 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFV 174
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 175 AV--EIPFTPRAKRVLELSLEEARQLGHN 201
>gi|168007899|ref|XP_001756645.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692241|gb|EDQ78599.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 933
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L + R E KI+G+G F
Sbjct: 112 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFV 171
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 172 AV--EIPFTPRAKRVLELSLEEARQLGHN 198
>gi|397654739|ref|YP_006495422.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
gi|393403695|dbj|BAM28187.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 0102]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|336120464|ref|YP_004575249.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
gi|334688261|dbj|BAK37846.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Microlunatus
phosphovorus NM-1]
Length = 849
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQKVEEIIGHGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
SP H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 72 QSPSGHIPFTPRAKKVLELSLREALQI-NHSYIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQINHSYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRSQVLQLL 142
>gi|311029019|ref|ZP_07707109.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus sp. m3-13]
Length = 812
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALIALGLGPEKIQKEVENLIGRGQDSG 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S H T A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QSIPH--YTPRAKKVIELSMDEARKLGHS-YVGTEHVLLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EARKL H GTE +L+G++ EG +AA+ L GV+L K R + ++++
Sbjct: 95 EARKLGHSYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLL 143
>gi|423718349|ref|ZP_17692531.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365159|gb|EID42460.1| ATP-dependent Clp protease ATP-binding subunit clpA [Geobacillus
thermoglucosidans TNO-09.020]
Length = 810
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G+G
Sbjct: 15 LAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQKEVESLIGRGHEVS 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++V++ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 75 HTIHYTP---RAKKVLELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 130
Query: 121 EKAKE 125
KA++
Sbjct: 131 NKARQ 135
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 93 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 145
>gi|337291601|ref|YP_004630622.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
gi|334699907|gb|AEG84703.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans BR-AD22]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|25029085|ref|NP_739139.1| endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens
YS-314]
gi|259505920|ref|ZP_05748822.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium
efficiens YS-314]
gi|259166401|gb|EEW50955.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
efficiens YS-314]
Length = 927
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLDAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -KPTTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|386741076|ref|YP_006214256.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
gi|384477770|gb|AFH91566.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 31]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|68535364|ref|YP_250069.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVRTEVKDIIGTGG--- 71
Query: 61 FSPEHP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
HP P T A++V++ A+ L+ G+ + +LLG+ E + ++L
Sbjct: 72 ----HPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVK 126
Query: 116 LG 117
LG
Sbjct: 127 LG 128
>gi|383314945|ref|YP_005375800.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|384509550|ref|YP_005686218.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|385808249|ref|YP_005844646.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
gi|308277132|gb|ADO27031.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis I19]
gi|380870446|gb|AFF22920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis P54B96]
gi|383805642|gb|AFH52721.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 267]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|384507453|ref|YP_005684122.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|384511635|ref|YP_005691213.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|387137283|ref|YP_005693263.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302206878|gb|ADL11220.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis C231]
gi|341825574|gb|AEK93095.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis PAT10]
gi|348607728|gb|AEP71001.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 42/02-A]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|288554696|ref|YP_003426631.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
gi|288545856|gb|ADC49739.1| class III stress response-related ATPase [Bacillus pseudofirmus
OF4]
Length = 813
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE +L+G++ EG +AAK L A G+ K++ E ++GKG
Sbjct: 16 LAQEEAIRLGHNNIGTEHVLLGLIREGEGIAAKALQALGLGSEKIQKEVETLIGKGQEGS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 KTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDF 58
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEV 147
>gi|206972226|ref|ZP_03233173.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
gi|206732800|gb|EDZ49975.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH1134]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|227505957|ref|ZP_03936006.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
gi|227197479|gb|EEI77527.1| ATPase with chaperone activity, ATP-binding subunit
[Corynebacterium striatum ATCC 6940]
Length = 904
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPHTGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLIKLG 128
>gi|384516372|ref|YP_005711464.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
gi|334697573|gb|AEG82370.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
ulcerans 809]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|229027929|ref|ZP_04184082.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
gi|228733317|gb|EEL84146.1| Negative regulator of genetic competence [Bacillus cereus AH1271]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|392401263|ref|YP_006437863.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
gi|390532341|gb|AFM08070.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis Cp162]
Length = 874
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 4 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 60
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 61 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 117
>gi|384177987|ref|YP_005563749.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324324071|gb|ADY19331.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|163841921|ref|YP_001626326.1| hemolysin [Renibacterium salmoninarum ATCC 33209]
gi|162955397|gb|ABY24912.1| negative regulator of genetic competence [Renibacterium
salmoninarum ATCC 33209]
Length = 830
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGIAAKALESLSISLDAVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|300859188|ref|YP_003784171.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|384505360|ref|YP_005682030.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
gi|300686642|gb|ADK29564.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302331444|gb|ADL21638.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1002]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|295395582|ref|ZP_06805776.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
gi|294971601|gb|EFG47482.1| ATP-dependent protease, ATPase subunit [Brevibacterium mcbrellneri
ATCC 49030]
Length = 870
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ LKH GTE IL+G++ EG +AAK L ++L VR++ V I+G+G
Sbjct: 15 LAQEEAKLLKHNYIGTEHILLGLIHEGEGIAAKALEGMDISLEGVREQVVDIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPTGHIPFTPRAKKVLELSLREALQLGHT-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR E +K++
Sbjct: 94 EALQLGHTYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQEVIKLI 142
>gi|229159255|ref|ZP_04287279.1| Negative regulator of genetic competence [Bacillus cereus R309803]
gi|228624147|gb|EEK80949.1| Negative regulator of genetic competence [Bacillus cereus R309803]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|229170933|ref|ZP_04298534.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|423405194|ref|ZP_17382367.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|423462644|ref|ZP_17439438.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|423480037|ref|ZP_17456751.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
gi|228612473|gb|EEK69694.1| Negative regulator of genetic competence [Bacillus cereus MM3]
gi|401130823|gb|EJQ38479.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
gi|401645564|gb|EJS63219.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
gi|402424021|gb|EJV56217.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|168028746|ref|XP_001766888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681867|gb|EDQ68290.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EGT +AAK L + GV L + R E KI+G+G F
Sbjct: 19 EARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFVAV-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 77 EIPFTPRAKRVLELSLEEARQLGHN 101
>gi|203454812|ref|YP_002225128.1| gp251 [Mycobacterium phage Myrna]
gi|197311860|gb|ACH62218.1| gp251 [Mycobacterium phage Myrna]
Length = 235
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AAK L A + L +VR E +I+G G
Sbjct: 25 LAQEEARMLNHAYIGTEHLLLGLVHEGEGVAAKALQALDINLEEVRAEVEEIIGHGQ--- 81
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T+ ++RV++ ++ L+ G++ + LLL + E + G ++L G
Sbjct: 82 QAPTGHIPFTDRSKRVLELSLREALQLGHN-YIGTEHLLLALIREGEGVGCQVLVKRGAE 140
Query: 120 DEKAKEL 126
K +++
Sbjct: 141 LTKVRQV 147
>gi|218233784|ref|YP_002364931.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228919032|ref|ZP_04082411.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|229176682|ref|ZP_04304086.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|365164056|ref|ZP_09360142.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|423416018|ref|ZP_17393138.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|423428188|ref|ZP_17405192.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|423578489|ref|ZP_17554600.1| chaperone ClpB [Bacillus cereus VD014]
gi|423590631|ref|ZP_17566693.1| chaperone ClpB [Bacillus cereus VD045]
gi|218161741|gb|ACK61733.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
B4264]
gi|228606725|gb|EEK64142.1| Negative regulator of genetic competence [Bacillus cereus 172560W]
gi|228840557|gb|EEM85819.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|363613357|gb|EHL64874.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
gi|401094465|gb|EJQ02546.1| chaperone ClpB [Bacillus cereus BAG3O-2]
gi|401127110|gb|EJQ34839.1| chaperone ClpB [Bacillus cereus BAG4O-1]
gi|401220268|gb|EJR26910.1| chaperone ClpB [Bacillus cereus VD045]
gi|401221214|gb|EJR27838.1| chaperone ClpB [Bacillus cereus VD014]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|84497246|ref|ZP_00996068.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
gi|84382134|gb|EAP98016.1| putative ATP-dependent Clp protease [Janibacter sp. HTCC2649]
Length = 848
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +A+K L + G++L VR++ +I+G+G
Sbjct: 15 LAQEEARLLNHNYIGTEHILLGLIHEGEGVASKALESLGISLDAVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLGRVRQQVIQLI 142
>gi|228912821|ref|ZP_04076468.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228846757|gb|EEM91762.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|229148491|ref|ZP_04276747.1| Negative regulator of genetic competence [Bacillus cereus m1550]
gi|228634907|gb|EEK91480.1| Negative regulator of genetic competence [Bacillus cereus m1550]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|229188367|ref|ZP_04315415.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
gi|228595041|gb|EEK52812.1| Negative regulator of genetic competence [Bacillus cereus ATCC
10876]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|30260272|ref|NP_842649.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42779162|ref|NP_976409.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47525336|ref|YP_016685.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47569816|ref|ZP_00240486.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49183115|ref|YP_026367.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49481552|ref|YP_034434.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65317542|ref|ZP_00390501.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Bacillus anthracis str. A2012]
gi|118475852|ref|YP_893003.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|165873139|ref|ZP_02217755.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167635098|ref|ZP_02393415.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|167641960|ref|ZP_02400195.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|170689571|ref|ZP_02880757.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|170707575|ref|ZP_02898028.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|177655585|ref|ZP_02936966.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190568958|ref|ZP_03021859.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|196036353|ref|ZP_03103750.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196041747|ref|ZP_03109037.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|196047734|ref|ZP_03114935.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|206978371|ref|ZP_03239244.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217957658|ref|YP_002336200.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218901283|ref|YP_002449117.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|222093852|ref|YP_002527902.1| negative regulator of genetic competence clpc/mecb (ATP-dependent
clp protease) [Bacillus cereus Q1]
gi|225862134|ref|YP_002747512.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227812755|ref|YP_002812764.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228925335|ref|ZP_04088431.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228931584|ref|ZP_04094490.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228943888|ref|ZP_04106273.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228983337|ref|ZP_04143550.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229089213|ref|ZP_04220494.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|229119744|ref|ZP_04249005.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|229136928|ref|ZP_04265555.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|229153860|ref|ZP_04281990.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|229182476|ref|ZP_04309727.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|229194472|ref|ZP_04321275.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|229601409|ref|YP_002864733.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|254684415|ref|ZP_05148275.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CNEVA-9066]
gi|254724222|ref|ZP_05186007.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A1055]
gi|254733764|ref|ZP_05191479.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Western North America USA6153]
gi|254744615|ref|ZP_05202294.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Kruger B]
gi|254756320|ref|ZP_05208349.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Vollum]
gi|254758398|ref|ZP_05210425.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Australia 94]
gi|300119607|ref|ZP_07057151.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|301051819|ref|YP_003790030.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|375282179|ref|YP_005102614.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|376264109|ref|YP_005116821.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|386733948|ref|YP_006207129.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|402554332|ref|YP_006595603.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|421510407|ref|ZP_15957300.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|421640496|ref|ZP_16081078.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
gi|423357627|ref|ZP_17335222.1| chaperone ClpB [Bacillus cereus IS075]
gi|423376326|ref|ZP_17353640.1| chaperone ClpB [Bacillus cereus AND1407]
gi|423553984|ref|ZP_17530311.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|423572073|ref|ZP_17548287.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|423578066|ref|ZP_17554185.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|423608093|ref|ZP_17583986.1| chaperone ClpB [Bacillus cereus VD102]
gi|30253593|gb|AAP24135.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Ames]
gi|42735077|gb|AAS39017.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
ATCC 10987]
gi|47500484|gb|AAT29160.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. 'Ames Ancestor']
gi|47553509|gb|EAL11890.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Bacillus
cereus G9241]
gi|49177042|gb|AAT52418.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Sterne]
gi|49333108|gb|AAT63754.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|118415077|gb|ABK83496.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis str. Al Hakam]
gi|164711119|gb|EDR16680.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0488]
gi|167510091|gb|EDR85502.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0193]
gi|167529572|gb|EDR92322.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0442]
gi|170127571|gb|EDS96445.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0389]
gi|170666484|gb|EDT17261.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0465]
gi|172080049|gb|EDT65147.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0174]
gi|190559882|gb|EDV13866.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. Tsiankovskii-I]
gi|195990983|gb|EDX54954.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
W]
gi|196021437|gb|EDX60143.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB108]
gi|196027367|gb|EDX65984.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NVH0597-99]
gi|206743432|gb|EDZ54866.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
H3081.97]
gi|217064980|gb|ACJ79230.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH187]
gi|218540030|gb|ACK92428.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
AH820]
gi|221237900|gb|ACM10610.1| negative regulator of genetic competence clpC/mecB (ATP-dependent
Clp protease) [Bacillus cereus Q1]
gi|225787223|gb|ACO27440.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
03BB102]
gi|227007271|gb|ACP17014.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. CDC 684]
gi|228588938|gb|EEK46953.1| Negative regulator of genetic competence [Bacillus cereus m1293]
gi|228600931|gb|EEK58500.1| Negative regulator of genetic competence [Bacillus cereus BGSC 6E1]
gi|228629541|gb|EEK86238.1| Negative regulator of genetic competence [Bacillus cereus ATCC
4342]
gi|228646466|gb|EEL02673.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST26]
gi|228663645|gb|EEL19224.1| Negative regulator of genetic competence [Bacillus cereus 95/8201]
gi|228694052|gb|EEL47734.1| Negative regulator of genetic competence [Bacillus cereus Rock3-42]
gi|228776327|gb|EEM24680.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228815721|gb|EEM61957.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228828012|gb|EEM73740.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228834257|gb|EEM79798.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229265817|gb|ACQ47454.1| negative regulator of genetic competence ClpC/MecB [Bacillus
anthracis str. A0248]
gi|298723079|gb|EFI63977.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
SJ1]
gi|300373988|gb|ADK02892.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
biovar anthracis str. CI]
gi|358350702|dbj|BAL15874.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
NC7401]
gi|364509909|gb|AEW53308.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Bacillus
cereus F837/76]
gi|384383800|gb|AFH81461.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. H9401]
gi|401074493|gb|EJP82893.1| chaperone ClpB [Bacillus cereus IS075]
gi|401088783|gb|EJP96965.1| chaperone ClpB [Bacillus cereus AND1407]
gi|401182191|gb|EJQ89330.1| chaperone ClpB [Bacillus cereus ISP3191]
gi|401198795|gb|EJR05708.1| chaperone ClpB [Bacillus cereus MSX-A12]
gi|401203646|gb|EJR10482.1| chaperone ClpB [Bacillus cereus MSX-D12]
gi|401238776|gb|EJR45209.1| chaperone ClpB [Bacillus cereus VD102]
gi|401795542|gb|AFQ09401.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
FRI-35]
gi|401819489|gb|EJT18666.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. UR-1]
gi|403392312|gb|EJY89566.1| Negative regulator of genetic competence clpC/mecB [Bacillus
anthracis str. BF1]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|30018352|ref|NP_829983.1| negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228956523|ref|ZP_04118319.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229107768|ref|ZP_04237404.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|229125599|ref|ZP_04254631.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|229142888|ref|ZP_04271329.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|296500916|ref|YP_003662616.1| genetic competence negative regulator ClpC/MecB [Bacillus
thuringiensis BMB171]
gi|423631991|ref|ZP_17607737.1| chaperone ClpB [Bacillus cereus VD154]
gi|423638085|ref|ZP_17613737.1| chaperone ClpB [Bacillus cereus VD156]
gi|423646217|ref|ZP_17621787.1| chaperone ClpB [Bacillus cereus VD169]
gi|423653016|ref|ZP_17628315.1| chaperone ClpB [Bacillus cereus VD200]
gi|29893892|gb|AAP07184.1| Negative regulator of genetic competence clpC/mecB [Bacillus cereus
ATCC 14579]
gi|228640509|gb|EEK96898.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST24]
gi|228657791|gb|EEL13597.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-Cer4]
gi|228675617|gb|EEL30825.1| Negative regulator of genetic competence [Bacillus cereus Rock1-15]
gi|228803088|gb|EEM49910.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296321968|gb|ADH04896.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis BMB171]
gi|401262710|gb|EJR68848.1| chaperone ClpB [Bacillus cereus VD154]
gi|401271809|gb|EJR77812.1| chaperone ClpB [Bacillus cereus VD156]
gi|401287846|gb|EJR93613.1| chaperone ClpB [Bacillus cereus VD169]
gi|401303124|gb|EJS08687.1| chaperone ClpB [Bacillus cereus VD200]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|228950630|ref|ZP_04112764.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229067847|ref|ZP_04201164.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|423422315|ref|ZP_17399346.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|423439463|ref|ZP_17416401.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|423507892|ref|ZP_17484459.1| chaperone ClpB [Bacillus cereus HD73]
gi|449086748|ref|YP_007419189.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|228715206|gb|EEL67065.1| Negative regulator of genetic competence [Bacillus cereus F65185]
gi|228808981|gb|EEM55466.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401112817|gb|EJQ20691.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
gi|401120032|gb|EJQ27833.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
gi|402442679|gb|EJV74600.1| chaperone ClpB [Bacillus cereus HD73]
gi|449020505|gb|AGE75668.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|375289379|ref|YP_005123920.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
gi|371576668|gb|AEX40271.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 3/99-5]
Length = 885
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKLG 128
>gi|423614628|ref|ZP_17590485.1| chaperone ClpB [Bacillus cereus VD107]
gi|401237472|gb|EJR43924.1| chaperone ClpB [Bacillus cereus VD107]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|423399355|ref|ZP_17376553.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|423409869|ref|ZP_17387018.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
gi|401644455|gb|EJS62145.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
gi|401652409|gb|EJS69966.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|423480226|ref|ZP_17456916.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
gi|401149231|gb|EJQ56706.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|336324767|ref|YP_004604733.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336100749|gb|AEI08569.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 903
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
E R L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 34 EGRALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVRTEVKEIIGTGG------- 86
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
HP P T A++V++ A+ L+ G+ + LLLG+ E + ++L LG
Sbjct: 87 HPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHLLLGLIREGEGVAAQVLVKLG 143
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE +L+G++ EG +AA+ L G L +VR + ++++
Sbjct: 109 EALQLGHKYIGTEHLLLGLIREGEGVAAQVLVKLGADLARVRQQVIQLL 157
>gi|229074143|ref|ZP_04207189.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|229094804|ref|ZP_04225809.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|229100880|ref|ZP_04231685.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|229113758|ref|ZP_04243193.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|407708030|ref|YP_006831615.1| ATP/GTP hydrolase [Bacillus thuringiensis MC28]
gi|423381871|ref|ZP_17359154.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|423439740|ref|ZP_17416646.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|423450103|ref|ZP_17426981.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|423467997|ref|ZP_17444765.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|423537397|ref|ZP_17513815.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|423543125|ref|ZP_17519513.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|423543569|ref|ZP_17519927.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|423620310|ref|ZP_17596141.1| chaperone ClpB [Bacillus cereus VD115]
gi|423626976|ref|ZP_17602751.1| chaperone ClpB [Bacillus cereus VD148]
gi|228669629|gb|EEL25036.1| Negative regulator of genetic competence [Bacillus cereus Rock1-3]
gi|228682534|gb|EEL36606.1| Negative regulator of genetic competence [Bacillus cereus Rock3-28]
gi|228688547|gb|EEL42420.1| Negative regulator of genetic competence [Bacillus cereus Rock3-29]
gi|228708913|gb|EEL61040.1| Negative regulator of genetic competence [Bacillus cereus Rock4-18]
gi|401126726|gb|EJQ34460.1| chaperone ClpB [Bacillus cereus BAG5O-1]
gi|401166825|gb|EJQ74125.1| chaperone ClpB [Bacillus cereus HuB4-10]
gi|401187734|gb|EJQ94806.1| chaperone ClpB [Bacillus cereus HuB5-5]
gi|401248870|gb|EJR55191.1| chaperone ClpB [Bacillus cereus VD115]
gi|401250171|gb|EJR56475.1| chaperone ClpB [Bacillus cereus VD148]
gi|401628497|gb|EJS46338.1| chaperone ClpB [Bacillus cereus BAG1O-2]
gi|402411864|gb|EJV44227.1| chaperone ClpB [Bacillus cereus BAG6O-1]
gi|402421921|gb|EJV54165.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
gi|402459103|gb|EJV90841.1| chaperone ClpB [Bacillus cereus HuB2-9]
gi|407385715|gb|AFU16216.1| Negative regulator of genetic competence [Bacillus thuringiensis
MC28]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228898835|ref|ZP_04063117.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|434378724|ref|YP_006613368.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
gi|74491873|gb|EAO55060.1| Negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228860735|gb|EEN05113.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 4222]
gi|401877281|gb|AFQ29448.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-789]
Length = 811
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|152973929|ref|YP_001373446.1| ATPase [Bacillus cytotoxicus NVH 391-98]
gi|152022681|gb|ABS20451.1| ATPase AAA-2 domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 811
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ K++ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKIQKEVEALIGRGTEVS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|423645099|ref|ZP_17620715.1| chaperone ClpB [Bacillus cereus VD166]
gi|401267794|gb|EJR73850.1| chaperone ClpB [Bacillus cereus VD166]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|336321879|ref|YP_004601847.1| ATPase AAA [[Cellvibrio] gilvus ATCC 13127]
gi|336105460|gb|AEI13279.1| ATPase AAA-2 domain protein [[Cellvibrio] gilvus ATCC 13127]
Length = 860
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRAQVQEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLNKLG 128
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + +++V
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVIQLV 142
>gi|229009591|ref|ZP_04166817.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|229053928|ref|ZP_04195362.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|423370664|ref|ZP_17348069.1| chaperone ClpB [Bacillus cereus VD142]
gi|423456297|ref|ZP_17433150.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|423473107|ref|ZP_17449849.1| chaperone ClpB [Bacillus cereus BAG6O-2]
gi|423526416|ref|ZP_17502865.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|423556922|ref|ZP_17533225.1| chaperone ClpB [Bacillus cereus MC67]
gi|423602389|ref|ZP_17578389.1| chaperone ClpB [Bacillus cereus VD078]
gi|423665405|ref|ZP_17640544.1| chaperone ClpB [Bacillus cereus VDM022]
gi|228721346|gb|EEL72867.1| Negative regulator of genetic competence [Bacillus cereus AH603]
gi|228751613|gb|EEM01413.1| Negative regulator of genetic competence [Bacillus mycoides DSM
2048]
gi|401073400|gb|EJP81822.1| chaperone ClpB [Bacillus cereus VD142]
gi|401130896|gb|EJQ38551.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
gi|401163466|gb|EJQ70812.1| chaperone ClpB [Bacillus cereus HuA4-10]
gi|401194237|gb|EJR01229.1| chaperone ClpB [Bacillus cereus MC67]
gi|401225928|gb|EJR32472.1| chaperone ClpB [Bacillus cereus VD078]
gi|401290312|gb|EJR96007.1| chaperone ClpB [Bacillus cereus VDM022]
gi|402426605|gb|EJV58726.1| chaperone ClpB [Bacillus cereus BAG6O-2]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|218895217|ref|YP_002443628.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228905879|ref|ZP_04069776.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|228963182|ref|ZP_04124351.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402562827|ref|YP_006605551.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
gi|423364494|ref|ZP_17341984.1| chaperone ClpB [Bacillus cereus VD022]
gi|423565560|ref|ZP_17541836.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|218542156|gb|ACK94550.1| negative regulator of genetic competence ClpC/MecB [Bacillus cereus
G9842]
gi|228796440|gb|EEM43879.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228853694|gb|EEM98454.1| Negative regulator of genetic competence [Bacillus thuringiensis
IBL 200]
gi|401072913|gb|EJP81367.1| chaperone ClpB [Bacillus cereus VD022]
gi|401193762|gb|EJR00765.1| chaperone ClpB [Bacillus cereus MSX-A1]
gi|401791479|gb|AFQ17518.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis HD-771]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|228937384|ref|ZP_04100030.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228970270|ref|ZP_04130929.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228976840|ref|ZP_04137252.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|384184166|ref|YP_005570062.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410672453|ref|YP_006924824.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|423387432|ref|ZP_17364686.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|423526620|ref|ZP_17503065.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|452196459|ref|YP_007476540.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228782810|gb|EEM30976.1| Negative regulator of genetic competence [Bacillus thuringiensis
Bt407]
gi|228789379|gb|EEM37299.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228822217|gb|EEM68199.1| Negative regulator of genetic competence [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326937875|gb|AEA13771.1| negative regulator of genetic competence clpC/mecB [Bacillus
thuringiensis serovar chinensis CT-43]
gi|401629015|gb|EJS46843.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
gi|402455660|gb|EJV87441.1| chaperone ClpB [Bacillus cereus HuB1-1]
gi|409171582|gb|AFV15887.1| negative regulator of genetic competence ClpC/MecB [Bacillus
thuringiensis Bt407]
gi|452101852|gb|AGF98791.1| ATP-dependent Clp protease [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|229040987|ref|ZP_04189750.1| Negative regulator of genetic competence [Bacillus cereus AH676]
gi|228727284|gb|EEL78478.1| Negative regulator of genetic competence [Bacillus cereus AH676]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|365873228|ref|ZP_09412761.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
gi|363983315|gb|EHM09522.1| ATPase with chaperone activity, ATP-binding subunit
[Thermanaerovibrio velox DSM 12556]
Length = 817
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G+L EG +A++ L A G+ L ++R++ ++VG G+ P
Sbjct: 19 EALRLGHEVIGTEHILLGLLAEGEGVASQVLRAAGLELDEIREQVERVVGVGE-PKDKPV 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PL+ A+RV+D ++ G + V +LLG+ +E + +IL +G K +
Sbjct: 78 DLPLSPRAKRVLDLSMREARNMGVN-YVGTEHILLGLLAEGEGVAFQILNRMGLDPVKVR 136
Query: 125 E 125
+
Sbjct: 137 Q 137
>gi|44417|emb|CAA37573.1| unnamed protein product [Mycobacterium leprae]
Length = 649
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVRSQVEDIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|163938089|ref|YP_001642973.1| ATPase [Bacillus weihenstephanensis KBAB4]
gi|229131089|ref|ZP_04260001.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|229165070|ref|ZP_04292865.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|423485381|ref|ZP_17462063.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|423491106|ref|ZP_17467750.1| chaperone ClpB [Bacillus cereus CER057]
gi|423502098|ref|ZP_17478715.1| chaperone ClpB [Bacillus cereus CER074]
gi|423514654|ref|ZP_17491161.1| chaperone ClpB [Bacillus cereus HuA2-1]
gi|423514934|ref|ZP_17491415.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|423596971|ref|ZP_17572981.1| chaperone ClpB [Bacillus cereus VD048]
gi|423671531|ref|ZP_17646535.1| chaperone ClpB [Bacillus cereus VDM034]
gi|423672665|ref|ZP_17647604.1| chaperone ClpB [Bacillus cereus VDM062]
gi|163860286|gb|ABY41345.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
gi|228618333|gb|EEK75363.1| Negative regulator of genetic competence [Bacillus cereus AH621]
gi|228652302|gb|EEL08227.1| Negative regulator of genetic competence [Bacillus cereus
BDRD-ST196]
gi|401151492|gb|EJQ58943.1| chaperone ClpB [Bacillus cereus CER074]
gi|401162031|gb|EJQ69390.1| chaperone ClpB [Bacillus cereus CER057]
gi|401168435|gb|EJQ75698.1| chaperone ClpB [Bacillus cereus HuA2-4]
gi|401218148|gb|EJR24832.1| chaperone ClpB [Bacillus cereus VD048]
gi|401291920|gb|EJR97585.1| chaperone ClpB [Bacillus cereus VDM034]
gi|401311525|gb|EJS16820.1| chaperone ClpB [Bacillus cereus VDM062]
gi|402441572|gb|EJV73522.1| chaperone ClpB [Bacillus cereus BtB2-4]
gi|402442054|gb|EJV73998.1| chaperone ClpB [Bacillus cereus HuA2-1]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|332671844|ref|YP_004454852.1| ATPase AAA-2 domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332340882|gb|AEE47465.1| ATPase AAA-2 domain protein [Cellulomonas fimi ATCC 484]
Length = 860
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRAQVQEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLNKLG 128
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + +++V
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVIQLV 142
>gi|356513459|ref|XP_003525431.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 101 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 160
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++++++ + G++
Sbjct: 161 AV--EIPFTPRAKRVLEFSLEEARQLGHN 187
>gi|302872270|ref|YP_003840906.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302575129|gb|ADL42920.1| ATPase AAA-2 domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 829
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLHSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEK 122
++
Sbjct: 133 PQR 135
>gi|296118950|ref|ZP_06837523.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
gi|295968048|gb|EFG81300.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Corynebacterium ammoniagenes DSM 20306]
Length = 905
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIQEGEGVAAKALESMGISLEDVRGEVEAIIGHG---- 70
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 71 TQPHNGHVPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLTKLG 128
>gi|340793465|ref|YP_004758928.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
gi|340533375|gb|AEK35855.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
variabile DSM 44702]
Length = 874
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRTEVEDIIGTGG--- 71
Query: 61 FSPEHP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
HP P T A++V++ A+ L+ G+ + +LLG+ E + ++L
Sbjct: 72 ----HPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVK 126
Query: 116 LG 117
LG
Sbjct: 127 LG 128
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|257068481|ref|YP_003154736.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
gi|256559299|gb|ACU85146.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium faecium DSM 4810]
Length = 879
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ E + AK L A GVTL VR++ I+G+G+ +P
Sbjct: 19 EARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVREQVRDIIGEGN---QTPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
H P T A++V++ ++ L+ G++ + +LLG+ E + K+L+ L
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGTAVKVLSRL 127
>gi|172041364|ref|YP_001801078.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448824288|ref|YP_007417457.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
gi|171852668|emb|CAQ05644.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7109]
gi|448277785|gb|AGE37209.1| ATP-dependent Clp protease [Corynebacterium urealyticum DSM 7111]
Length = 894
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIQEGEGVAAKALESMGISLDAVRTEVKEIIGSGG--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P + P T A++V++ A+ L+ G+ + +LLG+ E + ++L LG
Sbjct: 72 -NPPSGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|15827032|ref|NP_301295.1| ATP-dependent Clp protease [Mycobacterium leprae TN]
gi|221229510|ref|YP_002502926.1| ATP-dependent Clp protease [Mycobacterium leprae Br4923]
gi|13432105|sp|P24428.2|CLPC_MYCLE RecName: Full=Probable ATP-dependent Clp protease ATP-binding
subunit
gi|13092579|emb|CAC29743.1| putative ATP-dependent Clp protease [Mycobacterium leprae]
gi|219932617|emb|CAR70328.1| putative ATP-dependent Clp protease [Mycobacterium leprae Br4923]
Length = 848
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVRSQVEDIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|415728266|ref|ZP_11471839.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
gi|388065404|gb|EIK87895.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 6119V5]
Length = 882
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +A+K L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGDGIASKALSSKGVDLEGARKQVEEMIGKG---A 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VAPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGIGTQVLIKM 127
>gi|293332601|ref|NP_001169540.1| uncharacterized protein LOC100383416 [Zea mays]
gi|224029989|gb|ACN34070.1| unknown [Zea mays]
gi|413916758|gb|AFW56690.1| cytokinin inducible protease1 [Zea mays]
Length = 921
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 104 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 164 AV--EIPFTPRAKRVLELSLEEARQLGHN 190
>gi|227497047|ref|ZP_03927298.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
gi|226833465|gb|EEH65848.1| ATP-dependent protease, ATPase subunit [Actinomyces urogenitalis
DSM 15434]
Length = 860
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L + ++L VR + V+I+G+G +P
Sbjct: 19 EARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDISLDAVRGQVVEIIGEGQ---AAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGVAAQVLTKLG 128
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G+L EG +AA+ L G L VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVMQML 142
>gi|415717998|ref|ZP_11467110.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
gi|388060353|gb|EIK83047.1| ATPase AAA-2 domain protein [Gardnerella vaginalis 1500E]
Length = 879
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L+H GTE IL+G++ EG +A+K L + GV L R + +++GKG
Sbjct: 15 LAQEEARSLQHNYIGTEHILLGLIREGDGIASKALSSKGVDLEGARKQVEEMIGKG---A 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G+S + +LLG+ E + G ++L +
Sbjct: 72 VAPSGHIPFTPHAKQVLELSLREALQLGHS-YIGTEHILLGLIREGEGIGTQVLIKM 127
>gi|386774044|ref|ZP_10096422.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium paraconglomeratum LC44]
Length = 862
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ E + AK L A GVTL VR++ I+G+G+
Sbjct: 15 LAQDEARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVREQVRDIIGEGN--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
+P H P T A++V++ ++ L+ G++ + +LLG+ E + K+L+ L
Sbjct: 72 QTPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGTAVKVLSRL 127
>gi|326328759|ref|ZP_08195095.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
gi|325953381|gb|EGD45385.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Nocardioidaceae bacterium Broad-1]
Length = 861
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVRNQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHS-YIGTEHILLGLIREGEGVAAQVLQKLG 128
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHSYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVIQLL 142
>gi|229015484|ref|ZP_04172482.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|229021693|ref|ZP_04178275.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|423393465|ref|ZP_17370691.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
gi|228739561|gb|EEL89975.1| Negative regulator of genetic competence [Bacillus cereus AH1272]
gi|228745771|gb|EEL95775.1| Negative regulator of genetic competence [Bacillus cereus AH1273]
gi|401629572|gb|EJS47385.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
Length = 811
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHVLLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|380302202|ref|ZP_09851895.1| ATPase with chaperone activity, ATP-binding subunit
[Brachybacterium squillarum M-6-3]
Length = 863
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ E + AK L A GVTL VR++ I+G+G+ +P
Sbjct: 19 EARLLNHNYIGTEHILLGLIHENEGVGAKALEALGVTLDAVREQVRDIIGEGN---QTPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
H P T A++V++ ++ L+ G++ + +LLG+ E + K+L+ L
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGTAVKVLSRL 127
>gi|328956590|ref|YP_004373976.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
gi|328672914|gb|AEB28960.1| class III stress response-like ATPase, AAA+ superfamily
[Carnobacterium sp. 17-4]
Length = 830
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EA+ +H + GTE IL+G+++E +A K L VT +R+E G G +
Sbjct: 15 MAQEEAKGFRHHSVGTEHILLGLIMEQDGIAGKTLRQFSVTEMDIREEIEHFTGYGTMKY 74
Query: 61 FSPEHP-PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
S P + A++ I +A D + G S V LLLG+ E D KIL L +
Sbjct: 75 LSKNAILPYSPRAKQAITFATDEARRMG-SALVGTEHLLLGLLREEDILSSKILNNLDIN 133
Query: 120 DEKAKEL 126
KA+++
Sbjct: 134 LNKARQI 140
>gi|20146162|dbj|BAB88968.1| stress-related ATPase [Bacillus cereus]
Length = 175
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 8 KLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEHPP 67
++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G + + P
Sbjct: 17 RIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHYTP 76
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAKE 125
A++VI+ ++D K G+S V +LLG+ E + ++L LG S KA++
Sbjct: 77 ---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQ 130
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 88 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 140
>gi|357589640|ref|ZP_09128306.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
nuruki S6-4]
Length = 869
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRTEVEDIIGTGG--- 71
Query: 61 FSPEHP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
HP P T A++V++ A+ L+ G+ + +LLG+ E + ++L
Sbjct: 72 ----HPPNGYIPFTPRAKKVLELALREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVK 126
Query: 116 LG 117
LG
Sbjct: 127 LG 128
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHKYIGTEHILLGLIREGEGVAAQVLVKLGADLSRVRQQVIQLL 142
>gi|358446330|ref|ZP_09156877.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
gi|356607742|emb|CCE55201.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
casei UCMA 3821]
Length = 905
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIQEGEGVAAKALESMGISLEDVRGEVEAIIGHG---- 70
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 71 TQPHNGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLTKLG 128
>gi|115487910|ref|NP_001066442.1| Os12g0230100 [Oryza sativa Japonica Group]
gi|122248633|sp|Q2QVG9.2|CLPC2_ORYSJ RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=Casein lytic proteinase C2;
Flags: Precursor
gi|108862366|gb|ABA96309.2| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|108862367|gb|ABG21929.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648949|dbj|BAF29461.1| Os12g0230100 [Oryza sativa Japonica Group]
Length = 919
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 102 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 161
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 162 AV--EIPFTPRAKRVLELSLEEARQLGHN 188
>gi|222616839|gb|EEE52971.1| hypothetical protein OsJ_35634 [Oryza sativa Japonica Group]
Length = 832
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN 101
>gi|423421752|ref|ZP_17398841.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
gi|401096871|gb|EJQ04908.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
Length = 811
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++ H GTE IL+G++ EG +AAK L A G++ KV+ E ++G+G
Sbjct: 16 LSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTVHYTP---RAKKVIELSMDEARKLGHS-YVGTEHVLLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|340359190|ref|ZP_08681685.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
gi|339885200|gb|EGQ74938.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 448 str. F0400]
Length = 853
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L + ++L VR + V+I+G+G +P
Sbjct: 19 EARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDISLDAVRGQVVEIIGEGQ---SAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGVAAQVLTKLG 128
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G+L EG +AA+ L G L VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVMQML 142
>gi|168026983|ref|XP_001766010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682653|gb|EDQ69069.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK + + GV L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMGVNLKEARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN 101
>gi|220911112|ref|YP_002486421.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857990|gb|ACL38332.1| ATPase AAA-2 domain protein [Arthrobacter chlorophenolicus A6]
Length = 830
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|357160412|ref|XP_003578756.1| PREDICTED: chaperone protein ClpC2, chloroplastic-like
[Brachypodium distachyon]
Length = 920
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 103 LAQEEARRLGHNFVGTEQILLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 162
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 163 AV--EIPFTPRAKRVLELSLEEARQLGHN 189
>gi|392958574|ref|ZP_10324083.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
gi|391875475|gb|EIT84086.1| Class III stress response-related ATPase, ClpC [Bacillus macauensis
ZFHKF-1]
Length = 810
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L G+ K++ E ++G+G
Sbjct: 16 LAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALHVLGLGPEKIQKEVETLIGRGQESV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE--LESLSSEPGS 135
KA++ L+ L S S
Sbjct: 132 NKARQQVLQLLGSNEAS 148
>gi|443669503|ref|ZP_21134716.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
gi|443330204|gb|ELS44939.1| clp amino terminal domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 1599
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H G E I +G++ E + +A++ L G+TL R E KI+GKG
Sbjct: 15 LAQEEARRLGHNFVGAEFIFLGLIGEASGIASQVLRQQGITLKNARIEVEKILGKGS--G 72
Query: 61 FSPE-HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDS 107
SPE +P P TE A+ V++ A+ K G S + LL+GI+ E +S
Sbjct: 73 ISPEMNPVDIPFTESAKLVLNSALSFADKLG-SESIDTEHLLIGIFQEGES 122
>gi|159027973|emb|CAO87136.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1602
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H G E I +G++ E + +A++ L G+TL R E KI+GKG
Sbjct: 15 LAQEEARRLGHNFVGAEFIFLGLIGEASGIASQVLRQQGITLKNARIEVEKILGKGS--G 72
Query: 61 FSPE-HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDS 107
SPE +P P TE A+ V++ A+ K G S + LL+GI+ E +S
Sbjct: 73 ISPEMNPVDIPFTESAKLVLNSALSFADKLG-SESIDTEHLLIGIFQEGES 122
>gi|420153551|ref|ZP_14660509.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
gi|394759147|gb|EJF41931.1| Clp amino terminal domain protein [Actinomyces massiliensis F0489]
Length = 851
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L + V+L VR + V I+G+G +P
Sbjct: 19 EARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDVSLDAVRAQVVDIIGEGQ---SAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLLREGEGVAAQVLTKLG 128
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G+L EG +AA+ L G L VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLLREGEGVAAQVLTKLGADLSTVRQTVMQML 142
>gi|379716065|ref|YP_005304402.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|387139348|ref|YP_005695327.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387141325|ref|YP_005697303.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|389851114|ref|YP_006353349.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
gi|349735826|gb|AEQ07304.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355393116|gb|AER69781.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377654771|gb|AFB73120.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 316]
gi|388248420|gb|AFK17411.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium
pseudotuberculosis 258]
Length = 885
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G
Sbjct: 15 LAQEEARGLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEAVRQEVEEIIGHGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L +G
Sbjct: 72 -EPPVGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLVKIG 128
>gi|218186618|gb|EEC69045.1| hypothetical protein OsI_37876 [Oryza sativa Indica Group]
Length = 1412
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 595 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 654
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 655 AV--EIPFTPRAKRVLELSLEEARQLGHN 681
>gi|399212|sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic; Flags: Precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A) [Solanum lycopersicum]
Length = 926
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 107 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFI 166
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 167 AV--EIPFTPRAKRVLELSLEEARQLGHN 193
>gi|359775853|ref|ZP_09279175.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
gi|359306869|dbj|GAB13004.1| putative ATP-dependent Clp protease ATP-binding subunit ClpC
[Arthrobacter globiformis NBRC 12137]
Length = 830
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|116668736|ref|YP_829669.1| ATPase [Arthrobacter sp. FB24]
gi|116608845|gb|ABK01569.1| ATPase AAA-2 domain protein [Arthrobacter sp. FB24]
Length = 830
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|119961353|ref|YP_945989.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
aurescens TC1]
gi|119948212|gb|ABM07123.1| putative ATP-dependent Clp protease, ATP-binding subunit
[Arthrobacter aurescens TC1]
Length = 830
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|227489371|ref|ZP_03919687.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090744|gb|EEI26056.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 870
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +++G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRKEVEELIGPGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPPSGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLVREGEGVAARVLVKLG 128
>gi|421733018|ref|ZP_16172133.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407073059|gb|EKE46057.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 811
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +A K L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 TSV--PHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 133 NKARQQVLQLLGSNETGS 150
>gi|184201561|ref|YP_001855768.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
gi|183581791|dbj|BAG30262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Kocuria
rhizophila DC2201]
Length = 872
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AAK L + GVTL R++ I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGVAAKALESMGVTLSAAREQVQDIIGPGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLGI + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLEHSLREALQLGHN-YIGTEHILLGIIRAGEGVASQVLVKLGAD 130
Query: 120 DEKAK 124
K +
Sbjct: 131 PAKVR 135
>gi|356527573|ref|XP_003532383.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 919
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 101 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 160
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 161 AV--EIPFTSRAKRVLELSLEEARQLGHN 187
>gi|227540962|ref|ZP_03971011.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183222|gb|EEI64194.1| ATP-dependent protease, ATPase subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 870
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR E +++G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRKEVEELIGPGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 72 -QPPSGHIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLVREGEGVAARVLVKLG 128
>gi|385267113|ref|ZP_10045200.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
gi|385151609|gb|EIF15546.1| ATPase AAA-2 domain-containing protein [Bacillus sp. 5B6]
Length = 811
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 6/138 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +A K L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQEST 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 TSV--PHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE--LESL-SSEPGS 135
KA++ L+ L S+E GS
Sbjct: 133 NKARQQVLQLLGSNETGS 150
>gi|11467441|ref|NP_043587.1| Clp protease ATP binding subunit [Odontella sinensis]
gi|1352089|sp|P49574.1|CLPC_ODOSI RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog
gi|1185136|emb|CAA91619.1| caseinolytic-like Clp protease [Odontella sinensis]
Length = 885
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR++ H GTE +L+GI+ + + A+ L VTL K R E +G+G F
Sbjct: 15 LSQEEARRMGHNFVGTEQLLLGIIGQRHGIGARALKKQKVTLKKARREIELYIGRGTGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A+RV++ AV H+ K V +LL + SE+D + L LG +
Sbjct: 75 AS--EIPFTPRAKRVLEMAV-HEGKDLGQNFVGTEHILLALISESDGVAMRTLDKLGVNI 131
Query: 121 EKAKEL 126
K + L
Sbjct: 132 PKLRNL 137
>gi|289705692|ref|ZP_06502076.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
gi|289557532|gb|EFD50839.1| negative regulator of genetic competence ClpC/MecB [Micrococcus
luteus SK58]
Length = 851
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ + +G+G
Sbjct: 15 LAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESMDISLGAVREKVQEDIGQGQ--Q 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 73 NPPGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVQLG 128
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVQLGADLNRVRQTVIQLL 142
>gi|1168972|sp|P46523.1|CLPA_BRANA RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog, chloroplastic; Flags: Precursor
gi|406311|emb|CAA53077.1| clpA [Brassica napus]
Length = 874
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 55 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 114
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 115 AV--EIPFTPRAKRVLELSLEEARQLGHN 141
>gi|399213|sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
Length = 923
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 165 AV--EIPFTPRAKRVLELSLEEARQLGHN 191
>gi|118488171|gb|ABK95905.1| unknown [Populus trichocarpa]
Length = 835
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 75 AV--EIPFTPRAKRVLELSLEEARQLGHN 101
>gi|256372657|ref|YP_003110481.1| ATPase AAA-2 domain-containing protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009241|gb|ACU54808.1| ATPase AAA-2 domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 829
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV--GKGDF 58
+ + EA+ L H GTE IL+G++ EG +AAK L + GV+L ++R+E + G
Sbjct: 15 LAQEEAKLLHHNYIGTEHILLGLVHEGEGIAAKALESLGVSLDQLREEVTRQSEPSPGP- 73
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
+P P T A++V+++++ L+ G++ + +LLG+ E + G K+L ALG
Sbjct: 74 ---TPNSPAFTVRAKKVLEYSLREALQLGHN-YIGTEHMLLGLVREGEGTGAKVLLALGV 129
Query: 119 SDEKAKE--LESLSSEPG 134
+ ++ ++ LSS G
Sbjct: 130 DLTRVRQQVMQILSSTEG 147
>gi|379058467|ref|ZP_09848993.1| Clp-family ATP-binding protease [Serinicoccus profundi MCCC
1A05965]
Length = 841
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AAK L + ++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHEGEGVAAKALESLDISLDAVRQQVQEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
SP H P T A++V++ ++ L+ G++ + LLLG+ E + ++L LG
Sbjct: 72 QSPTGHIPFTPRAKKVLELSLREGLQLGHN-YIGTEHLLLGLIREGEGVAAQVLVKLG 128
>gi|428298989|ref|YP_007137295.1| Clp domain-containing protein [Calothrix sp. PCC 6303]
gi|428235533|gb|AFZ01323.1| Clp domain protein [Calothrix sp. PCC 6303]
Length = 585
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ E S+A++ L + GV L R E +I+G+G
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEEKSIASQILTSVGVDLKDARIEVERIIGRGSDVV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T A+RV++ +V + G S ++T LLLG+ E + ++L LG
Sbjct: 75 --GVDIPFTHRAKRVLELSVQQADRLGAS-DITPEHLLLGLIREGEGVAVQVLEILGVDL 131
Query: 121 EKAK 124
K +
Sbjct: 132 SKVQ 135
>gi|356516495|ref|XP_003526929.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Glycine max]
Length = 922
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 165 AV--EIPFTPRAKRVLELSLEEARQLGHN 191
>gi|224136316|ref|XP_002322299.1| predicted protein [Populus trichocarpa]
gi|222869295|gb|EEF06426.1| predicted protein [Populus trichocarpa]
Length = 932
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 AV--EIPFTPRAKRVLELSLEEARQLGHN 192
>gi|167044665|gb|ABZ09336.1| putative Clp, partial [uncultured marine microorganism
HF4000_APKG7H23]
Length = 568
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ H GTE IL+G+ E +AA+ L + GV L K+R I+G+G+
Sbjct: 18 LAQEEAQRFNHNYIGTEHILLGLARETDGVAARVLNSLGVELSKIRSAVEFIIGRGE--R 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
SP LT A++VI+ AVD + + + LL+GI E + +L +LG S
Sbjct: 76 PSPGDIGLTPRAKKVIELAVDEARRLSHH-YIGTEHLLIGIMREGEGVAAGVLESLGVSL 134
Query: 121 EKAK 124
EK +
Sbjct: 135 EKVR 138
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK 55
EAR+L H GTE +L+GI+ EG +AA L + GV+L KVR E+ +I+ +
Sbjct: 97 EARRLSHHYIGTEHLLIGIMREGEGVAAGVLESLGVSLEKVRSETTRILNQ 147
>gi|357520587|ref|XP_003630582.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
gi|355524604|gb|AET05058.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[Medicago truncatula]
Length = 926
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 109 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 168
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 169 AV--EIPFTPRAKRVLELSLEEARQLGHN 195
>gi|415886308|ref|ZP_11548131.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
gi|387588961|gb|EIJ81282.1| Class III stress response-related ATPase, ClpC [Bacillus
methanolicus MGA3]
Length = 814
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A G+ K++ E ++G G
Sbjct: 16 LAQEEAIRLGHNNIGTEHILLGLVREGEGIAAKALNALGLGSEKIQKEVENLIGTGKEVA 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 146
>gi|356508861|ref|XP_003523172.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 1
[Glycine max]
gi|356508863|ref|XP_003523173.1| PREDICTED: chaperone protein ClpC, chloroplastic-like isoform 2
[Glycine max]
Length = 922
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 165 AV--EIPFTPRAKRVLELSLEEARQLGHN 191
>gi|38347158|emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa Japonica Group]
Length = 888
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 71 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 130
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 131 AV--EIPFTPRAKRVLELSLEEARQLGHN 157
>gi|307136002|gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
Length = 929
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 AV--EIPFTPRAKRVLELSLEEARQLGHN 192
>gi|242075576|ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
gi|241938907|gb|EES12052.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
Length = 921
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 104 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 164 AV--EIPFTPRAKRVLELSLEEARQLGHN 190
>gi|255540075|ref|XP_002511102.1| ATP-dependent clp protease, putative [Ricinus communis]
gi|223550217|gb|EEF51704.1| ATP-dependent clp protease, putative [Ricinus communis]
Length = 924
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 AV--EIPFTPRAKRVLELSLEEARQLGHN 192
>gi|187251928|ref|YP_001876410.1| ATPase [Elusimicrobium minutum Pei191]
gi|186972088|gb|ACC99073.1| ATPases with chaperone activity, ATP-binding subunit
[Elusimicrobium minutum Pei191]
Length = 839
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ H GTE +L+G++ S + K L + G+ +VR E K+VG GD
Sbjct: 15 IAQEEAKRFNHDYVGTEHLLLGLVSIEDSASYKMLSSLGIGYKRVRAEIEKMVGIGDTIM 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V++++++ +G + V LLLGI E + +IL LG S
Sbjct: 75 LVGE-IPFTPRAKKVLEYSLEESQNAG-ADYVGTEHLLLGIIREEEGVAVRILDGLGLSP 132
Query: 121 EKAKE 125
E +E
Sbjct: 133 ETIRE 137
>gi|163791642|ref|ZP_02186039.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
gi|159873091|gb|EDP67198.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Carnobacterium sp. AT7]
Length = 830
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EA+ +H + GTE IL+G+++E +A K L VT VR+E G G +
Sbjct: 15 MAQEEAKGFRHHSVGTEHILLGLIMEQEGIAGKTLRQFSVTEMDVREEIEHFTGYGTMKY 74
Query: 61 FSPEHP-PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
S P + A++ I +A D + G S V LLLG+ E D KIL+ L
Sbjct: 75 LSKNAILPYSPRAKQAITFATDEARRMG-SVFVGTEHLLLGLLREEDILSSKILSNLDID 133
Query: 120 DEKAKEL 126
KA+++
Sbjct: 134 LNKARQI 140
>gi|357149204|ref|XP_003575035.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 921
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 104 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 164 AV--EIPFTPRAKRVLELSLEEARQLGHN 190
>gi|347602486|sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
Flags: Precursor
Length = 918
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 101 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 160
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 161 AV--EIPFTPRAKRVLELSLEEARQLGHN 187
>gi|225456471|ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 165 AV--EIPFTPRAKRVLELSLEEARQLGHN 191
>gi|406573371|ref|ZP_11049123.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
gi|404557303|gb|EKA62753.1| Clp-family ATP-binding protease [Janibacter hoylei PVAS-1]
Length = 839
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +A+K L + GV+L VR++ I+G G
Sbjct: 15 LAQEEARLLNHNYIGTEHILLGLIHEGEGVASKALESLGVSLDAVREQVQDIIGPGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVATQVLVKLG 128
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +A + L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVATQVLVKLGADLGRVRQTVIQLI 142
>gi|308171976|ref|YP_003918681.1| class III stress response-like ATPase, AAA+ superfamily [Bacillus
amyloliquefaciens DSM 7]
gi|384157699|ref|YP_005539772.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|384162492|ref|YP_005543871.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|384166714|ref|YP_005548092.1| class III stress response-related ATPase [Bacillus
amyloliquefaciens XH7]
gi|307604840|emb|CBI41211.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens DSM 7]
gi|328551787|gb|AEB22279.1| class III stress response-related ATPase, AAA+ superfamily protein
[Bacillus amyloliquefaciens TA208]
gi|328910047|gb|AEB61643.1| class III stress response ATPase [Bacillus amyloliquefaciens LL3]
gi|341825993|gb|AEK87244.1| class III stress response-related ATPase, AAA+ superfamily
[Bacillus amyloliquefaciens XH7]
Length = 811
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +A K L A G+ K++ E ++G+G
Sbjct: 16 LAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQEST 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 TSV--PHYTPRAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNE 147
>gi|125590233|gb|EAZ30583.1| hypothetical protein OsJ_14634 [Oryza sativa Japonica Group]
Length = 1033
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 216 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 275
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 276 AV--EIPFTPRAKRVLELSLEEARQLGHN 302
>gi|239916715|ref|YP_002956273.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|281414827|ref|ZP_06246569.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
gi|239837922|gb|ACS29719.1| ATPase with chaperone activity, ATP-binding subunit [Micrococcus
luteus NCTC 2665]
Length = 851
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ + +G+G
Sbjct: 15 LAQEEARMLNHSYIGTEHILLGLIHEGEGVAAKALESMDISLGAVREKVQEDIGQGQ--Q 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 73 NPPGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVIQLL 142
>gi|147866973|emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
Length = 890
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 79 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 138
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 139 AV--EIPFTPRAKRVLELSLEEARQLGHN 165
>gi|218194777|gb|EEC77204.1| hypothetical protein OsI_15716 [Oryza sativa Indica Group]
Length = 785
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 101 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 160
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 161 AV--EIPFTPRAKRVLELSLEEARQLGHN 187
>gi|449440498|ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 AV--EIPFTPRAKRVLELSLEEARQLGHN 192
>gi|357149201|ref|XP_003575034.1| PREDICTED: chaperone protein ClpC1, chloroplastic-like
[Brachypodium distachyon]
Length = 879
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 62 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 121
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 122 AV--EIPFTPRAKRVLELSLEEARQLGHN 148
>gi|326514880|dbj|BAJ99801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 920
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE +L+G++ EGT +AAK L + G+ L R E KI+G+G+ F
Sbjct: 103 LAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFV 162
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 163 AV--EIPFTPRAKRVLELSLEEARQLGHN 189
>gi|297815698|ref|XP_002875732.1| hypothetical protein ARALYDRAFT_484935 [Arabidopsis lyrata subsp.
lyrata]
gi|297321570|gb|EFH51991.1| hypothetical protein ARALYDRAFT_484935 [Arabidopsis lyrata subsp.
lyrata]
Length = 369
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
E+R+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 19 ESRRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFCAL-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLL 98
PLT +RV+D +++ + G V ++L
Sbjct: 77 EIPLTPRTKRVLDLSLEEARQLGEGIAVRVLEIL 110
>gi|406028809|ref|YP_006727700.1| Negative regulator of genetic competence ClpC/mecB [Mycobacterium
indicus pranii MTCC 9506]
gi|405127356|gb|AFS12611.1| Negative regulator of genetic competence ClpC/mecB [Mycobacterium
indicus pranii MTCC 9506]
Length = 558
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 142
>gi|215400791|ref|YP_002327552.1| caseinolytic-like Clp protease [Vaucheria litorea]
gi|194441241|gb|ACF70969.1| caseinolytic-like Clp protease [Vaucheria litorea]
Length = 862
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+G+ E+R+L H GTE IL+G++ E T +A + L + VTL R E +++G+G
Sbjct: 15 LGQEESRRLGHNFVGTEQILLGLIGENTGVAYRALKSFRVTLKDARLEVERMLGRGRGTT 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
F P T A+++++ +++ K N + LLL I +T+ + IL LG
Sbjct: 75 FPAGEIPFTPRAKKILEMSMEQGRKY-NHSYINTEHLLLAIIEDTNGAANNILIQLG 130
>gi|307150870|ref|YP_003886254.1| ATPase AAA-2 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981098|gb|ADN12979.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7822]
Length = 790
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+ H GTE +L+G++ E TS+AA L G+ L + R I G+G +SP
Sbjct: 19 EARRTGHNVVGTEHLLLGVIGEETSIAATVLRDLGINLPQTRRTIENITGRGP--GYSPA 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ P T +R+ + A + GN ++ LLL I S+ +S K+L G
Sbjct: 77 NIPFTPKVKRIFEAAFQEARQLGNR-VISPVHLLLAISSDQESLAAKVLTQQG 128
>gi|119714730|ref|YP_921695.1| ATPase [Nocardioides sp. JS614]
gi|119535391|gb|ABL80008.1| ATPase AAA-2 domain protein [Nocardioides sp. JS614]
Length = 861
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR + +I+G+G
Sbjct: 15 LAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVRAQVEEIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G+S + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHS-YIGTEHILLGLIREGEGVAAQVLQKLG 128
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHSYIGTEHILLGLIREGEGVAAQVLQKLGADLNRVRQQVIQLL 142
>gi|2921158|gb|AAC04687.1| ClpC [Arabidopsis thaliana]
Length = 928
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 107 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 166
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 167 AV--EIPFTPRAKRVLELSLEATRQLGHN 193
>gi|449470390|ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
gi|449505877|ref|XP_004162592.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 924
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGGGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 AV--EIPFTPRAKRVLELSLEEARQLGHN 192
>gi|220930935|ref|YP_002507843.1| ATPase AAA-2 domain-containing protein [Halothermothrix orenii H
168]
gi|219992245|gb|ACL68848.1| ATPase AAA-2 domain protein [Halothermothrix orenii H 168]
Length = 806
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ E EA KH GTE IL+G++ EG +AAK L G++ KV+++ K++G+G+
Sbjct: 15 LAEKEAVGFKHNYVGTEHILLGLVKEGQGVAAKALKDVGISEEKVKEQITKLIGEGNQEV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P LT +++V++ A+D + G++ + +LLG+ E + +ILA L D
Sbjct: 75 SGP--ISLTPRSKKVLNLALDEARRLGHN-YIGTEHILLGLIREGEGVAVRILANLNNGD 131
>gi|312879531|ref|ZP_07739331.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
gi|310782822|gb|EFQ23220.1| ATPase AAA-2 domain protein [Aminomonas paucivorans DSM 12260]
Length = 835
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G+L EG +AA+ L A G+ L ++R + VGKG E
Sbjct: 19 EALRLGHDVIGTEHILLGLLAEGEGVAAQVLGAFGLDLEELRGQIESTVGKGQ----PRE 74
Query: 65 HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDE 121
P PL+ A+RV+D ++ + + V +LLG+ +E + ++L +LG
Sbjct: 75 RPVDLPLSPRAKRVLDLSM-REARGMGVNYVGTEHILLGLLAEGEGVAAQVLGSLGLDLP 133
Query: 122 KAKE 125
K ++
Sbjct: 134 KVRQ 137
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDE 48
EAR + GTE IL+G+L EG +AA+ L + G+ L KVR E
Sbjct: 95 EARGMGVNYVGTEHILLGLLAEGEGVAAQVLGSLGLDLPKVRQE 138
>gi|359459996|ref|ZP_09248559.1| ATPase AAA [Acaryochloris sp. CCMEE 5410]
Length = 822
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA LK GTE IL+GI+ EGT +AAK L ++G L +VR E VK +G
Sbjct: 15 LAQQEATHLKQKCVGTELILLGIIAEGTGIAAKILKSSGANLKEVRIE-VKKLGISGTSS 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ E P T ++RV+D A++ + G++ V+ LLLG+ + S +IL LG
Sbjct: 74 ANIE-IPFTPRSKRVLDIALEESRQLGHN-YVSTEHLLLGLIQDEQSVAAQILVNLG 128
>gi|403225132|gb|AFR24744.1| ATP-dependent clp protease ATP-binding subunit [uncultured
Pelagomonas]
Length = 833
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R+L H GTE IL+G++ E +A K L GVTL + R E +I+G+G F
Sbjct: 15 LSQEESRRLGHNFVGTEQILLGLVGENGGVAYKVLRTFGVTLREARTEVERIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P T A+RV++ A++ G+ G + +LL + E G ++L LG
Sbjct: 75 --AVEIPFTPRAKRVLEIAIEEARDLGH-GYIGTEHILLALLEEEVGVGVRVLQQLGL 129
>gi|146297365|ref|YP_001181136.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410941|gb|ABP67945.1| ATPase AAA-2 domain protein [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 830
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQSAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLG-STYISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
+K E
Sbjct: 133 PQKLFE 138
>gi|414587486|tpg|DAA38057.1| TPA: hypothetical protein ZEAMMB73_563254, partial [Zea mays]
Length = 188
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 108 EARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV--AV 165
Query: 65 HPPLTEDAQRVIDWAVDHKLKSG 87
P T A+RV++ +++ + G
Sbjct: 166 EIPFTPRAKRVLELSLEEARQLG 188
>gi|413918180|gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
Length = 921
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK + + G+ L R E KI+G+G F
Sbjct: 104 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVMKSMGINLKDARVEVEKIIGRGSGFV 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 164 AV--EIPFTPRAKRVLELSLEEARQLGHN 190
>gi|335039209|ref|ZP_08532387.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180907|gb|EGL83494.1| ATPase AAA-2 domain protein [Caldalkalibacillus thermarum TA2.A1]
Length = 811
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG---- 56
+ + EA +L H GTE IL+G++ EG +AAK L A + + K+R E ++G+G
Sbjct: 16 LAQEEAMRLGHNNIGTEHILLGLVREGEGIAAKALQALNLDMEKIRKEVETLIGRGTQTT 75
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A++VI+ ++D K G++ V +LLG+ E + ++L L
Sbjct: 76 DNIHYTPR-------AKKVIELSMDEARKLGHT-YVGTEHVLLGLIREGEGVAARVLNNL 127
Query: 117 GFSDEKAKE 125
G S KA++
Sbjct: 128 GVSLNKARQ 136
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EARKL H GTE +L+G++ EG +AA+ L GV+L K R + ++++G + +P+
Sbjct: 94 EARKLGHTYVGTEHVLLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEAMAATPQ 153
>gi|334185828|ref|NP_001190035.1| Clp ATPase [Arabidopsis thaliana]
gi|332644946|gb|AEE78467.1| Clp ATPase [Arabidopsis thaliana]
Length = 921
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 101 EARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAV-- 158
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 159 EIPFTPRAKRVLELSLEEARQLGHN 183
>gi|449528185|ref|XP_004171086.1| PREDICTED: chaperone protein ClpC, chloroplastic-like, partial
[Cucumis sativus]
Length = 475
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 106 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 165
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 166 --AVEIPFTPRAKRVLELSLEEARQLGHN 192
>gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
gi|50657654|gb|AAT79639.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var.
liui]
Length = 823
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AA+ L + V L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAQVLKSMNVNLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A+RV++ +++ + G++ + LL+G+ E + ++L L
Sbjct: 75 --AVEIPFTPRAKRVLELSLEEARQLGHN-YIGTEHLLMGLVREGEGVAARVLENLA 128
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR+L H GTE +LMG++ EG +AA+ L V + +R E ++++G
Sbjct: 94 EARQLGHNYIGTEHLLMGLVREGEGVAARVLENLAVNVASIRTEVIQMLG 143
>gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana]
Length = 952
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 132 EARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAV-- 189
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 190 EIPFTPRAKRVLELSLEEARQLGHN 214
>gi|186510816|ref|NP_566912.2| Clp ATPase [Arabidopsis thaliana]
gi|75213256|sp|Q9SXJ7.1|CLPC2_ARATH RecName: Full=Chaperone protein ClpC2, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 2; AltName: Full=AtClpC; AltName: Full=Casein
lytic proteinase C2; Flags: Precursor
gi|5360574|dbj|BAA82062.1| AtClpC [Arabidopsis thaliana]
gi|332644945|gb|AEE78466.1| Clp ATPase [Arabidopsis thaliana]
Length = 952
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 132 EARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFVAV-- 189
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 190 EIPFTPRAKRVLELSLEEARQLGHN 214
>gi|344996728|ref|YP_004799071.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964947|gb|AEM74094.1| ATPase AAA-2 domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 829
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
++ E
Sbjct: 133 PQRLFE 138
>gi|312793061|ref|YP_004025984.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180201|gb|ADQ40371.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 829
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
++ E
Sbjct: 133 PQRLFE 138
>gi|452990568|emb|CCQ98240.1| class III stress response-related ATPase, AAA+ superfamily
[Clostridium ultunense Esp]
Length = 812
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 16/131 (12%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG---- 56
+ + EA++L+H GTE IL+G+L EG +AA L GV L VR+E +K +G+G
Sbjct: 17 LAQEEAKRLRHNYVGTEHILLGLLAEGEGVAATSLNKRGVDLEIVRNEVIKAIGEGSYNA 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGE--VTASDLLLGIWSETDSPGHKILA 114
D F+P +R+ + + L++ N G V +LLG+ E++ IL
Sbjct: 77 DIMGFTPR-------TKRIFELSF---LEARNLGHNYVGTEHILLGLLEESEGVAVAILK 126
Query: 115 ALGFSDEKAKE 125
LG K ++
Sbjct: 127 KLGVDTLKLRD 137
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 4 LEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
LEAR L H GTE IL+G+L E +A L GV K+RD+ + ++ G
Sbjct: 94 LEARNLGHNYVGTEHILLGLLEESEGVAVAILKKLGVDTLKLRDDILSMLSDG 146
>gi|397669226|ref|YP_006510761.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
gi|395143331|gb|AFN47438.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium propionicum F0230a]
Length = 831
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L G++L R++ V+I+G+G
Sbjct: 19 EAKLLNHNYIGTEHLLLGLIHEGEGVAAKALEQMGISLQAAREQVVEIMGQGQ--QVPSG 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P + A+RV++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 77 HIPFSPRAKRVLELSLREALQM-NHNYIGTEHILLGLVREGEGVAAQVLLKLG 128
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV----GKGDFFF 60
EA ++ H GTE IL+G++ EG +AA+ L G L +VR ++++ GK
Sbjct: 94 EALQMNHNYIGTEHILLGLVREGEGVAAQVLLKLGADLGRVRSTVIQLLAGYQGKEASMA 153
Query: 61 FSPEHPPLTEDAQRVIDW 78
+PE P +Q V+D
Sbjct: 154 GAPEAGPEKSSSQ-VLDQ 170
>gi|461753|sp|P35100.1|CLPC_PEA RecName: Full=Chaperone protein ClpC, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog; AltName: Full=Casein lytic proteinase C; Flags:
Precursor
gi|169128|gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum]
Length = 922
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 105 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 164
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ + + + G++
Sbjct: 165 AV--EIPFTPRAKRVLELSQEEARQLGHN 191
>gi|37521637|ref|NP_925014.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC
7421]
gi|35212635|dbj|BAC90009.1| gll2068 [Gloeobacter violaceus PCC 7421]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL ++ EGT AA L + GV+L + R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILCALVGEGTGNAAHVLKSAGVSLKRARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P T +RV++ ++ G++ + LL+G+ E + ++L +G +
Sbjct: 75 AV--EIPFTPRTKRVLELSLQEARYLGHN-HIGTEHLLIGLLQEGEGVASRVLENMGVN- 130
Query: 121 EKAKELESLSS 131
A+ LE + S
Sbjct: 131 -LAQLLEQIRS 140
>gi|222529809|ref|YP_002573691.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|222456656|gb|ACM60918.1| ATPase AAA-2 domain protein [Caldicellulosiruptor bescii DSM 6725]
Length = 829
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
++ E
Sbjct: 133 PQRLFE 138
>gi|312621967|ref|YP_004023580.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202434|gb|ADQ45761.1| ATPase AAA-2 domain protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 829
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLQSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
++ E
Sbjct: 133 PQRLFE 138
>gi|187776547|ref|ZP_02993020.1| hypothetical protein CLOSPO_00059 [Clostridium sporogenes ATCC
15579]
gi|187775206|gb|EDU39008.1| ATPase family associated with various cellular activities (AAA)
[Clostridium sporogenes ATCC 15579]
Length = 814
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +G+T KVR + GKG+ + E
Sbjct: 23 EAEKFKHGYVGTEHILLGILIE-DGVAKQLLNNSGITEDKVRQLIERYEGKGEMDLYKNE 81
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ K
Sbjct: 82 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDVERLK 139
Query: 125 E--LESLSSE 132
+ +++LS E
Sbjct: 140 KELIKNLSGE 149
>gi|312127146|ref|YP_003992020.1| ATPase AAA-2 domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777165|gb|ADQ06651.1| ATPase AAA-2 domain protein [Caldicellulosiruptor hydrothermalis
108]
Length = 829
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + A +L H GTE +L+G++ EG +AA+ L + GVT KV DE +++G+GD+
Sbjct: 16 LAQQAAAELGHNYVGTEHLLLGLIREGGGIAARVLHSQGVTEEKVIDEIEELIGRGDYQL 75
Query: 61 FSPEHPP-LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P+ P T +RV + A + G+S ++ +LL I E +S +IL LG
Sbjct: 76 --PQPPTGFTPRTKRVFEIAFMEARRLGSS-YISTEHILLAIMREGESVAVRILMDLGVD 132
Query: 120 DEKAKE 125
++ E
Sbjct: 133 PQRLFE 138
>gi|302790788|ref|XP_002977161.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
gi|300155137|gb|EFJ21770.1| hypothetical protein SELMODRAFT_176012 [Selaginella moellendorffii]
Length = 901
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + GV L + R E KI+G+G F
Sbjct: 81 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKEARVEVEKIIGRGSGFV 140
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 141 --AVEIPFTPRAKRVLELSLEEARQLGHN 167
>gi|397903987|ref|ZP_10504920.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
gi|343178731|emb|CCC57819.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Caloramator
australicus RC3]
Length = 818
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+GI+ EG A+K L G+ K+R+ ++I GKG+ FF E
Sbjct: 19 EAKRLNHNYIGTEHLLLGIIREGGQ-ASKVLKDLGIDDEKIRNLIIEIEGKGEEFFNFHE 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+I+ A ++ ++ N V ++L + E + ILA LG KA+
Sbjct: 78 -IPLTPRTKRIIELA-RNEARNLNHNFVAPEHMMLALLREGEGVAIAILAKLGIDIVKAR 135
>gi|28493032|ref|NP_787193.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
gi|28572245|ref|NP_789025.1| Clp-family ATP-binding protease/regulator [Tropheryma whipplei
TW08/27]
gi|28410376|emb|CAD66762.1| putative Clp-family ATP-binding protease/regulator [Tropheryma
whipplei TW08/27]
gi|28476072|gb|AAO44162.1| ATP-dependent Clp protease ATP-binding subunit [Tropheryma whipplei
str. Twist]
Length = 840
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AA+ L + +TL + R+ +++G+G
Sbjct: 19 LAQEEARTLSHNYIGTEHVLLGLISEGDGIAAQALESLDITLERAREGVAELIGRGQ--N 76
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ H P T A++V++ ++ L+ G++ + +LLGI E + ++L +G
Sbjct: 77 ATSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGILHEGEGIAAQVLVNMG 132
>gi|227547923|ref|ZP_03977972.1| conserved hypothetical protein, partial [Corynebacterium
lipophiloflavum DSM 44291]
gi|227080008|gb|EEI17971.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 180
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AAK L + G+ L VR E +++G G P
Sbjct: 35 EARALNHNYMGTEHILLGLIKEGEGVAAKALESMGINLEDVRREVEELIGHGT----QPV 90
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 91 TGYIPFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLIKLG 144
>gi|443315779|ref|ZP_21045253.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
gi|442784616|gb|ELR94482.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 6406]
Length = 824
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L+H GTE +L+GIL +G S AA L G+TL R E I+G+G P
Sbjct: 19 EARRLQHNFVGTEQLLLGILKQGNSQAASVLADLGITLESARQEVEAIIGRGS--GNPPV 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T ++V + A K ++ + LLL + +S ++++ LG K +
Sbjct: 77 EVPFTPKVKQVFEQAFQEARKL-DADYIGPEHLLLSLTQSDESVAYRVIENLGVPPTKLR 135
Query: 125 -----ELESLSSEPGSVD 137
EL +++ P VD
Sbjct: 136 TRLIQELGEVAAVPAGVD 153
>gi|374249468|ref|YP_005088687.1| clpC gene product [Phaeocystis antarctica]
gi|340008159|gb|AEK26791.1| Clp protease ATP binding subunit [Phaeocystis antarctica]
Length = 830
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EG+ + K L + GV L R E KI+G+G F
Sbjct: 15 LAQEEARRLGHNFVGTEQILLGLIGEGSGVGPKILKSMGVKLKDARIEVEKIIGRGSGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P T A+R ++ +++ + G++ + LLLG+ E + ++L L
Sbjct: 75 AV--EIPFTPRAKRCLELSLEEARQLGHN-YIGTEHLLLGLIVEGEGVAARVLEQL 127
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-----DFF 59
EAR+L H GTE +L+G++VEG +AA+ L V L K+R E ++ +G+ D
Sbjct: 94 EARQLGHNYIGTEHLLLGLIVEGEGVAARVLEQLDVNLPKLRTEIIRALGENTKVNSDSN 153
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKL 84
+ P L E + A+D KL
Sbjct: 154 ANRSKSPTLDEFGTNLTQKALDGKL 178
>gi|315301154|ref|ZP_07872427.1| negative regulator of genetic competence ClpC/MecB, partial
[Listeria ivanovii FSL F6-596]
gi|313630479|gb|EFR98339.1| negative regulator of genetic competence ClpC/MecB [Listeria
ivanovii FSL F6-596]
Length = 119
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE IL+G++ EG +AAK L+ GV+ KV+ E ++G G+ + +
Sbjct: 20 EAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGVSAEKVQQEVEGLIGHGEKAVTTIQ 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETD 106
+ P A++VI+ ++D K G++ V +LLG+ E +
Sbjct: 80 YTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGE 117
>gi|125974293|ref|YP_001038203.1| ATPase AAA-2 [Clostridium thermocellum ATCC 27405]
gi|256003489|ref|ZP_05428479.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281418347|ref|ZP_06249367.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|385779762|ref|YP_005688927.1| ATPase [Clostridium thermocellum DSM 1313]
gi|419722358|ref|ZP_14249502.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
gi|419725938|ref|ZP_14252972.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|125714518|gb|ABN53010.1| ATPase AAA-2 domain protein [Clostridium thermocellum ATCC 27405]
gi|255992513|gb|EEU02605.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 2360]
gi|281409749|gb|EFB40007.1| ATPase AAA-2 domain protein [Clostridium thermocellum JW20]
gi|316941442|gb|ADU75476.1| ATPase AAA-2 domain protein [Clostridium thermocellum DSM 1313]
gi|380770714|gb|EIC04600.1| ATPase AAA-2 domain protein [Clostridium thermocellum YS]
gi|380781543|gb|EIC11197.1| ATPase AAA-2 domain protein [Clostridium thermocellum AD2]
Length = 818
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A +L H GTE +L+G++ EG+ +AA+ L + GVT KV E +++G+G+ +
Sbjct: 20 AIELGHNYVGTEHLLLGLVKEGSGVAARVLQSQGVTEEKVIREIEELIGRGEMMGQPLDF 79
Query: 66 PPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK-AK 124
P T +RV++ + + G++ + LLLGI E +S +IL LG +K +
Sbjct: 80 TPRT---KRVLELSYREARRMGHN-YIGTEHLLLGIMKEGESVAVRILKDLGVEHQKLVQ 135
Query: 125 ELESLSSE 132
E+ ++ SE
Sbjct: 136 EIMNMLSE 143
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGV 40
EAR++ H GTE +L+GI+ EG S+A + L GV
Sbjct: 93 EARRMGHNYIGTEHLLLGIMKEGESVAVRILKDLGV 128
>gi|218437024|ref|YP_002375353.1| ATPase AAA [Cyanothece sp. PCC 7424]
gi|218169752|gb|ACK68485.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 7424]
Length = 792
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+ H GTE +L+G++ E TSLAA L G+ L + R + G+G +SP
Sbjct: 19 EARRTGHNVVGTEHLLLGVIGEETSLAASVLRDLGINLPQTRRIIEDMTGRGP--GYSPA 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P T +R+ + A + G+ +T LLL I +E +S KIL G +K +
Sbjct: 77 NIPFTPKVKRIFEGAFQEARQLGDR-VITPVHLLLAITTEKESLAGKILTQQGVDLKKLR 135
>gi|297734500|emb|CBI15747.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 153 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 212
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 213 --AVEIPFTPRAKRVLELSLEEARQLGHN 239
>gi|427740130|ref|YP_007059674.1| chaperone ATPase [Rivularia sp. PCC 7116]
gi|427375171|gb|AFY59127.1| ATPase with chaperone activity, ATP-binding subunit [Rivularia sp.
PCC 7116]
Length = 852
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G+L E T +AAK L GVTL R E KI+G+G F
Sbjct: 50 LAQEEARRLGHNFVGTEQILLGLLGEETGVAAKVLTDMGVTLRDARREVEKIIGRGSGFV 109
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
P P T + + + + G++ + LLLG+ + K+L L
Sbjct: 110 --PPEIPFTPKVKTLFEQSFKEARSLGHN-YIGTEHLLLGLTEAGEGVAAKVLQNL 162
>gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 104 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 163
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 164 --AVEIPFTPRAKRVLELSLEEARQLGHN 190
>gi|254425327|ref|ZP_05039045.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
gi|196192816|gb|EDX87780.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
Length = 822
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H G+E +L+GI+ E TS+AAK L G+ L R E I+G+G P
Sbjct: 19 EARRLGHNFVGSEQLLLGIIKENTSIAAKVLDEFGINLANARTEVESIIGRGS--GNGPV 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T ++V + A K + + LLL + ++S ++++A L EK +
Sbjct: 77 EIPFTPKVKQVFEQAFQEARKLDHP-YIEPEHLLLSLTQNSESVAYRVIANLDVDPEKIR 135
>gi|227494485|ref|ZP_03924801.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
gi|226832219|gb|EEH64602.1| ATPase with chaperone activity, ATP-binding subunit [Actinomyces
coleocanis DSM 15436]
Length = 880
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ EG +AAK L V +VR+ ++++G+G
Sbjct: 15 LAQNEARSLNHNYIGTEHLLLGLIQEGEGVAAKALEMANVDGEQVRESIIEMIGEGK--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + K+L LG
Sbjct: 72 NAPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVASKVLVKLG 128
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +A+K L G L ++R ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVASKVLVKLGADLAELRQSVIQLL 142
>gi|406982183|gb|EKE03537.1| ATP-dependent Clp protease ATP-binding subunit clpA-like protein
[uncultured bacterium]
Length = 464
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF- 59
+ + EAR+L H GTE IL+GIL EG + A L G+TL R E+ K+VG G+ +
Sbjct: 325 LAKEEARRLGHNMVGTEQILLGILGEGMGIGAIVLKNLGITLKDARIETEKLVGYGNEYS 384
Query: 60 ----FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
F+P L E I W+ K K N + + LLLGI E + K+L
Sbjct: 385 ETELTFTPRVKKLLE-----IAWS---KAKKFNHPRIESEHLLLGIIKEKECMAMKVLEN 436
Query: 116 LG 117
G
Sbjct: 437 FG 438
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA KH E IL+GIL EGT +AA+FL A+G+ L +R++ +IV S E
Sbjct: 19 EALNAKHSKLYPEHILLGILREGTGIAARFLKASGLNLETLREKVDEIVVMKQQGNLSAE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P + ++++ A D + KS + + L L + + +S K+L L + ++ K
Sbjct: 79 NLPFSSATKKILKEAWD-EAKSLGANYINTEHLFLSLLKDKNSSVTKLLDELDINKDRIK 137
Query: 125 E 125
+
Sbjct: 138 D 138
>gi|296130887|ref|YP_003638137.1| ATPase AAA-2 domain-containing protein [Cellulomonas flavigena DSM
20109]
gi|296022702|gb|ADG75938.1| ATPase AAA-2 domain protein [Cellulomonas flavigena DSM 20109]
Length = 858
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRAQVQEIIGEGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGRIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLNKLG 128
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + +++V
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLNKLGADLNRVRQQVIQLV 142
>gi|407797861|ref|ZP_11144776.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
gi|407017624|gb|EKE30381.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Salimicrobium
sp. MJ3]
Length = 821
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE +L+G++ EG +AAK L A G+ ++ E ++G G+
Sbjct: 16 LSQEEAVRLGHSNIGTEHVLLGLVKEGEGIAAKALTALGLEAETIQTEVENLIGAGEQKS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHSY-VGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGNNE 146
>gi|297795893|ref|XP_002865831.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
gi|297311666|gb|EFH42090.1| heat shock protein 93-V [Arabidopsis lyrata subsp. lyrata]
Length = 929
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 108 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 167
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 168 --AVEIPFTPRAKRVLELSLEEARQLGHN 194
>gi|333922411|ref|YP_004495991.1| ATPase AAA-2 domain-containing protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333747972|gb|AEF93079.1| ATPase AAA-2 domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 818
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L++P GTE IL+G++ +G S AAK L G+T KV ++V KG
Sbjct: 15 LAQEEARRLRYPNIGTEHILLGLIKQGDSFAAKALEQLGITADKVSAVLEQMVEKGTQPI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ PP T A+RV++ AV+ G++ V LLLG+ E + ++L +LG
Sbjct: 75 LG-DIPP-TPRAKRVLELAVEESRMLGHN-YVGTEHLLLGLIREGEGVAAQVLKSLGADL 131
Query: 121 EKAKE 125
++ ++
Sbjct: 132 DRVRQ 136
>gi|18423214|ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
gi|75170759|sp|Q9FI56.1|CLPC1_ARATH RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 1; AltName: Full=Casein lytic proteinase C1;
AltName: Full=Protein DE-REGULATED CAO ACCUMULATION 1;
AltName: Full=Protein IRON-RESCUED MUTANT 1; Flags:
Precursor
gi|9758239|dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana]
gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana]
gi|110742601|dbj|BAE99213.1| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008628|gb|AED96011.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis
thaliana]
Length = 929
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 108 LAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFV 167
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 168 --AVEIPFTPRAKRVLELSLEEARQLGHN 194
>gi|323703791|ref|ZP_08115429.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531260|gb|EGB21161.1| ATPase AAA-2 domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 818
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L++P GTE IL+G++ +G S AAK L G+T KV ++V KG
Sbjct: 15 LAQEEARRLRYPNIGTEHILLGLIKQGDSFAAKALEQLGITADKVSAVLEQMVEKGTQPI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ PP T A+RV++ AV+ G++ V LLLG+ E + ++L +LG
Sbjct: 75 LG-DIPP-TPRAKRVLELAVEESRMLGHN-YVGTEHLLLGLIREGEGVAAQVLKSLGADL 131
Query: 121 EKAKE 125
++ ++
Sbjct: 132 DRVRQ 136
>gi|307150856|ref|YP_003886240.1| Clp domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981084|gb|ADN12965.1| Clp domain protein [Cyanothece sp. PCC 7822]
Length = 1493
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H G E I +G++ E T +AA+ L G+ L R E KI+G+G
Sbjct: 15 LAQEEARRLGHNYVGAEFIFLGLIGEATGIAAQVLRQQGIKLKNARIEVEKIIGRGSGMI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDS 107
P TE A+ V++ A+ + G S + LL+GI+ E +S
Sbjct: 75 --TVDIPFTESAKLVLNGALSFAEQLG-SESINTEHLLMGIFQERES 118
>gi|156741993|ref|YP_001432122.1| ATPase [Roseiflexus castenholzii DSM 13941]
gi|156233321|gb|ABU58104.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
Length = 847
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR HP GTE IL+G++ EG +AA+ L GV L + R IVG G E
Sbjct: 23 EARAFNHPYIGTEHILLGLIREGEGVAARVLDELGVKLAQARHAVEFIVGHG-------E 75
Query: 65 HPP-----LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
PP LT A++VI +AV+ + K N + LLLG+ + +L LG S
Sbjct: 76 GPPRQDQDLTARAKKVIAYAVE-EAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVS 134
Query: 120 DEKAK 124
E+ +
Sbjct: 135 LEQVR 139
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EA++L H GTE +L+G++ G +A L GV+L +VR ++++ +G
Sbjct: 98 EAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRTNVMRVLRQG 149
>gi|311743343|ref|ZP_07717150.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
gi|311313411|gb|EFQ83321.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Aeromicrobium
marinum DSM 15272]
Length = 837
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR + I+G+G
Sbjct: 15 LAQEEARMLSHNYIGTEHILLGLIHEGEGVAAKALESLDISLEAVRAQVEDIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + +++V
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLV 142
>gi|237784954|ref|YP_002905659.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
gi|237757866|gb|ACR17116.1| ATP-dependent Clp protease [Corynebacterium kroppenstedtii DSM
44385]
Length = 903
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++ VR E I+G+G
Sbjct: 15 LAQEEARALNHNYIGTEHILLGLIREGEGVAAKALESMGISREAVRSEVEDIIGEGS--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P + P T A++V++ ++ L+ G+ + +LLG+ E + ++L LG
Sbjct: 72 -QPPSGYIPFTPRAKKVLELSLREALQLGHK-YIGTEHILLGLIREGEGVAAQVLVKLG 128
>gi|15983763|gb|AAL10478.1| AT3g48870/T21J18_140 [Arabidopsis thaliana]
Length = 558
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 128 LSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFV 187
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 188 --AVEIPFTPRAKRVLELSLEEARQLGHN 214
>gi|227872597|ref|ZP_03990933.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
gi|227841598|gb|EEJ51892.1| ATPase with chaperone activity, ATP-binding subunit [Oribacterium
sinus F0268]
Length = 827
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A + H GTE IL+G++ EGT++A K L ANGVT K+ D K + G+ +
Sbjct: 22 AEECHHQYIGTEHILLGLVREGTAVAGKVLKANGVTEEKIADMIAKFMVSGESGVSLADP 81
Query: 66 PPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T A+RV++ A+ + + G S V LL+ I + + +I++ LG S +K
Sbjct: 82 SGYTPSAKRVLEQAM-QEAREGQSRLVGTEHLLMAILKDGNCVASRIISTLGVSMQK 137
>gi|443327349|ref|ZP_21055976.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
gi|442793055|gb|ELS02515.1| ATPase with chaperone activity, ATP-binding subunit [Xenococcus sp.
PCC 7305]
Length = 787
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR + G+E +L+G++ EG+S+AAK L G+T+ K+R + VGKG
Sbjct: 15 LAQEEARNAGYNLVGSEHLLLGLIGEGSSVAAKILANQGLTIQKIRQVIAETVGKGG--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
FSP++ P T + + + A ++ + + +LL I S TD+ ++L G +
Sbjct: 73 FSPQNIPFTPKVKSIFEQAFTEA-RNLSINYIGPEHILLAITSLTDTLASRLLRDQGIN 130
>gi|297618415|ref|YP_003703574.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146252|gb|ADI03009.1| ATPase AAA-2 domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 830
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L HP GTE IL+G++ EG + AK + A GV L VR+E K++G S
Sbjct: 19 EARNLGHPAVGTEHILLGLIREGEGVGAKAILALGVDLETVRNELKKVLGDVGERKESAT 78
Query: 65 HP--PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
P+T A++V++ A + G V LLL + E S ++L +LG +
Sbjct: 79 STDLPITPRAKKVLNLAFEEARLQG-VNYVGTEHLLLALLREEQSVAAQVLNSLGIRPDA 137
Query: 123 AKE 125
+E
Sbjct: 138 VRE 140
>gi|357400203|ref|YP_004912128.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766612|emb|CCB75323.1| class III stress response-related ATPase, AAA+ superfamily
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 822
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|297819504|ref|XP_002877635.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
gi|297323473|gb|EFH53894.1| AtClpC [Arabidopsis lyrata subsp. lyrata]
Length = 953
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H GTE IL+G++ EGT +AAK L + G+ L R E KI+G+G F
Sbjct: 128 LSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEVEKIIGRGSGFV 187
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P T A+RV++ +++ + G++
Sbjct: 188 --AVEIPFTPRAKRVLELSLEEARQLGHN 214
>gi|452910065|ref|ZP_21958747.1| ATP-dependent Clp protease [Kocuria palustris PEL]
gi|452834683|gb|EME37482.1| ATP-dependent Clp protease [Kocuria palustris PEL]
Length = 884
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE +L+G++ E +AAK L + G+TL R++ I+G G
Sbjct: 15 LAQEEARMLNHNYIGTEHLLLGLIHENEGVAAKALDSLGITLNGAREQVQDIIGPGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLGI + ++L LG
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGIIRAGEGVAAQVLTKLGTE 130
Query: 120 DEKAK 124
+K +
Sbjct: 131 PQKVR 135
>gi|403510030|ref|YP_006641668.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402799243|gb|AFR06653.1| sigma-54 interaction domain protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 813
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|433457230|ref|ZP_20415238.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
gi|432195128|gb|ELK51687.1| ATP-dependent Clp protease, ATP-binding subunit [Arthrobacter
crystallopoietes BAB-32]
Length = 812
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L GV+L VR++ +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALEFLGVSLNGVREQVQEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVATQVLVKLG 107
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +A + L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVATQVLVKLGADLNRVRQQVIQLL 121
>gi|217076366|ref|YP_002334082.1| ClpC ATPase [Thermosipho africanus TCF52B]
gi|217036219|gb|ACJ74741.1| ClpC ATPase [Thermosipho africanus TCF52B]
Length = 819
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-DFF 59
M + EA++L H GTE +L+ IL + L G+T K+R+E + IVG G F
Sbjct: 15 MAQEEAKELGHSYVGTEHLLLAILKINDNKIKSILENYGITYTKIRNEVISIVGMGMRGF 74
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
SP+ P A+RV + A + KS ++ L LGI E + IL +G
Sbjct: 75 IMSPQMTP---RAKRVTELAYEEA-KSLGENKIKPIHLFLGILREGEGIAVHILRKMGID 130
Query: 120 DE 121
D+
Sbjct: 131 DQ 132
>gi|421837624|ref|ZP_16271750.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
gi|409740190|gb|EKN40561.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001627]
Length = 164
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|134298058|ref|YP_001111554.1| ATPase [Desulfotomaculum reducens MI-1]
gi|134050758|gb|ABO48729.1| ATPase AAA-2 domain protein [Desulfotomaculum reducens MI-1]
Length = 812
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+LK+P GTE IL+G++ EG +AA+ L + KV+ +IV G+
Sbjct: 15 LAQEEARRLKYPYIGTEHILLGLIREGEGIAARALEQMNINADKVKTTVEQIVEIGN-EA 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S E PP T A++V++ AV+ G++ V LLLG+ E + ++L +LG
Sbjct: 74 VSGEIPP-TPRAKKVLELAVEESRSMGHN-YVGTEHLLLGLVKEGEGVAAQVLVSLGADL 131
Query: 121 EKAKE 125
K ++
Sbjct: 132 GKVRQ 136
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
E+R + H GTE +L+G++ EG +AA+ L + G L KVR + + ++
Sbjct: 94 ESRSMGHNYVGTEHLLLGLVKEGEGVAAQVLVSLGADLGKVRQQVINML 142
>gi|386811802|ref|ZP_10099027.1| ATPase [planctomycete KSU-1]
gi|386404072|dbj|GAB61908.1| ATPase [planctomycete KSU-1]
Length = 826
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+ H GTE IL+G++ EG+ +AA L + L K+R E KIV G S
Sbjct: 19 EARRFNHEYIGTEHILLGLVKEGSGVAANVLQNLDIELKKIRLEVEKIVQSGS-DLVSVG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T ++V+++A++ G++ + LLLG+ E + ++L LG E +
Sbjct: 78 QLPFTPRVKKVLEYAMEEARALGHN-YIGTEHLLLGLLREQEGVAAQVLLNLGVKLEDVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR L H GTE +L+G+L E +AA+ L GV L VR+E + ++G
Sbjct: 95 EARALGHNYIGTEHLLLGLLREQEGVAAQVLLNLGVKLEDVREEVIGLLG 144
>gi|425455355|ref|ZP_18835075.1| Similar to Q110X8_TRIEI TPR repeat containing protein (fragment)
[Microcystis aeruginosa PCC 9807]
gi|389803788|emb|CCI17334.1| Similar to Q110X8_TRIEI TPR repeat containing protein (fragment)
[Microcystis aeruginosa PCC 9807]
Length = 1373
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H G E I +G++ E + +A++ L G+TL R E KI+G+G
Sbjct: 15 LAQEEAHRLGHNFVGAEFIFLGLIGEASGVASQVLRQQGITLKNARIEVEKILGRGS--G 72
Query: 61 FSPE-HP---PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDS 107
SPE +P P TE A+ V++ A+ K G S + LL+GI+ E +S
Sbjct: 73 ISPEMNPVDIPFTESAKLVLNSALSFADKLG-SESIDTEHLLIGIFQEGES 122
>gi|407985354|ref|ZP_11165952.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
gi|407373047|gb|EKF22065.1| istB-like ATP binding family protein [Mycobacterium hassiacum DSM
44199]
Length = 822
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEAVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|134099493|ref|YP_001105154.1| ATP-dependent Clp protease [Saccharopolyspora erythraea NRRL 2338]
gi|133912116|emb|CAM02229.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 174
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + GV+ VR + +I+G+GD
Sbjct: 4 LAQEEARTLNHNYIGTEHILLGLVHEGEGVAAKALESLGVSPEGVRRQVEEIIGRGD--Q 61
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
SP + P T ++V++ ++ L+ G++ + +LLG+ E + ++L L
Sbjct: 62 DSPSGNIPFTPRGKKVLELSLREALQLGHN-YIGTEHILLGLIREAEGVAAQVLVKLDAD 120
Query: 120 -DEKAKELESLSSEPG 134
D +E+ L S+ G
Sbjct: 121 LDRVRREVNRLISDSG 136
>gi|300790533|ref|YP_003770824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|384154066|ref|YP_005536882.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|399542411|ref|YP_006555073.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|299800047|gb|ADJ50422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei U32]
gi|340532220|gb|AEK47425.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
gi|398323181|gb|AFO82128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amycolatopsis
mediterranei S699]
Length = 831
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G+ L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAKE-- 125
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG + ++
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQV 117
Query: 126 LESLSSEPG 134
L+ LS G
Sbjct: 118 LQLLSGYQG 126
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLL 121
>gi|238061431|ref|ZP_04606140.1| ATPase [Micromonospora sp. ATCC 39149]
gi|237883242|gb|EEP72070.1| ATPase [Micromonospora sp. ATCC 39149]
Length = 818
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|390564544|ref|ZP_10245341.1| hypothetical protein NITHO_3720001 [Nitrolancetus hollandicus Lb]
gi|390172208|emb|CCF84664.1| hypothetical protein NITHO_3720001 [Nitrolancetus hollandicus Lb]
Length = 465
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+KL H GTE +L+GIL EG +AA L + GV L +VR + + ++G+
Sbjct: 93 LADREAQKLHHHFIGTEHLLLGILTEGQGIAAGVLASLGVPLAEVRQQILSVIGQT---- 148
Query: 61 FSPEHP-------PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKIL 113
+ PE TE A+ V+ +A + + N + LLLG+ E D ++L
Sbjct: 149 YVPEDSETPDKFQKFTERAREVLRYAQEEAQRL-NHTYIGPEHLLLGLVREGDGVAARVL 207
Query: 114 AALGFSDEKAK 124
+ +G K +
Sbjct: 208 SNMGVDLRKVR 218
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE +L+G++ E +AA+ L GV L K R I+G+GD +
Sbjct: 22 EAQRFNHNYIGTEHLLLGLVREEGGVAARVLRNMGVDLVKARTAVEFIIGRGDSMIV--D 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
LT A+RVI+ A D + + + + LLLGI +E +LA+LG
Sbjct: 80 EMRLTPRAKRVIELA-DREAQKLHHHFIGTEHLLLGILTEGQGIAAGVLASLG 131
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H G E +L+G++ EG +AA+ L GV L KVR I+G D +
Sbjct: 177 EAQRLNHTYIGPEHLLLGLVREGDGVAARVLSNMGVDLRKVRAAVASIIGPRD--SAAVH 234
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
LT A++VI+ AVD + + N + LLLG+ +E S +L +L
Sbjct: 235 ELGLTPRAKQVIELAVD-EARRLNHRYIGTEHLLLGLLAEGQSVAVGVLESL 285
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFF 59
EAR+L H GTE +L+G+L EG S+A L + V V ++++G+G F
Sbjct: 252 EARRLNHRYIGTEHLLLGLLAEGQSVAVGVLESLRVCQPDVGRRVMQVIGQGGVF 306
>gi|441216366|ref|ZP_20976990.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
gi|440624518|gb|ELQ86380.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium smegmatis MKD8]
Length = 827
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|378824547|ref|YP_005089717.1| clpC gene product (chloroplast) [Synedra acus]
gi|371572746|gb|AEX37842.1| Clp protease ATP binding subunit (chloroplast) [Synedra acus]
Length = 1107
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR++ H GTE +L+G++ + + AK L V+L K R E +G+G F
Sbjct: 15 LSQEEARRMGHNFVGTEQLLLGVIGQRHGIGAKALKKMKVSLKKARKEIEMYIGRGTGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A+RV++ AV+ G + V +LL + ETD + L LG
Sbjct: 75 AS--EIPFTPRAKRVLEMAVNEGKDLGQNF-VGTEHILLALLGETDGVAMRTLDKLGVDT 131
Query: 121 EKAKEL 126
+K +++
Sbjct: 132 KKLRDI 137
>gi|453382789|dbj|GAC82697.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
paraffinivorans NBRC 108238]
Length = 827
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|420914407|ref|ZP_15377714.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|420987968|ref|ZP_15451124.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|421034730|ref|ZP_15497751.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
gi|392125407|gb|EIU51163.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 6G-0125-S]
gi|392182247|gb|EIV07898.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 4S-0206]
gi|392228051|gb|EIV53564.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 3A-0930-S]
Length = 823
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|443671357|ref|ZP_21136469.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
gi|443416090|emb|CCQ14806.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Rhodococcus
sp. AW25M09]
Length = 825
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|414579681|ref|ZP_11436824.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|420886598|ref|ZP_15349958.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|420889758|ref|ZP_15353106.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|420892602|ref|ZP_15355946.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|420899862|ref|ZP_15363193.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|420908077|ref|ZP_15371395.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|420934689|ref|ZP_15397962.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|420939997|ref|ZP_15403264.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|420945254|ref|ZP_15408507.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|420959184|ref|ZP_15422418.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|420960066|ref|ZP_15423297.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
gi|420970045|ref|ZP_15433246.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|421000598|ref|ZP_15463731.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392082361|gb|EIU08187.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0421]
gi|392087506|gb|EIU13328.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0422]
gi|392097223|gb|EIU23017.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0817]
gi|392105981|gb|EIU31767.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1212]
gi|392108483|gb|EIU34263.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0708]
gi|392124205|gb|EIU49966.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-1215]
gi|392133101|gb|EIU58846.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-151-0930]
gi|392156859|gb|EIU82557.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-153-0915]
gi|392158462|gb|EIU84158.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 1S-154-0310]
gi|392175983|gb|EIV01644.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium abscessus 5S-0921]
gi|392202752|gb|EIV28348.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0912-S]
gi|392248910|gb|EIV74386.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-0107]
gi|392257278|gb|EIV82732.1| putative ATP-dependent Clp protease ATP-binding subunit
[Mycobacterium massiliense 2B-1231]
Length = 823
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|220927785|ref|YP_002504694.1| ATPase AAA [Clostridium cellulolyticum H10]
gi|219998113|gb|ACL74714.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
Length = 810
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEHPPL 68
L H GTE IL+G++ EGT +AA+ L G+T K+ E +++GKGD P
Sbjct: 23 LGHNYVGTEHILLGLVKEGTGVAARVLQGQGITEEKILKEIEELIGKGDAEGTQP--VGF 80
Query: 69 TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK-AKELE 127
T +RV++ A + G G + LLLGI E +S +IL LG +K EL
Sbjct: 81 TPRTKRVLELAFKEARRMGQ-GYIGTEHLLLGIMKEGESVAVRILMDLGVDPQKLLNELV 139
Query: 128 SLSSE--PGS 135
+ +E PGS
Sbjct: 140 KILTEETPGS 149
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EAR++ GTE +L+GI+ EG S+A + L GV K+ +E VKI+
Sbjct: 94 EARRMGQGYIGTEHLLLGIMKEGESVAVRILMDLGVDPQKLLNELVKIL 142
>gi|404257466|ref|ZP_10960792.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
gi|403404139|dbj|GAB99201.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
namibiensis NBRC 108229]
Length = 827
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|418418717|ref|ZP_12991902.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
gi|364001890|gb|EHM23082.1| ATP-dependent Clp protease ATP-binding subunit [Mycobacterium
abscessus subsp. bolletii BD]
Length = 823
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|296120872|ref|YP_003628650.1| ATPase AAA [Planctomyces limnophilus DSM 3776]
gi|296013212|gb|ADG66451.1| ATPase AAA-2 domain protein [Planctomyces limnophilus DSM 3776]
Length = 852
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E KIV G PE
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIRLEVEKIVQSG------PE 72
Query: 65 -----HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI++A++ + ++ N V LLLG+ E + ++L LG
Sbjct: 73 LVTMGKLPQTPRAKKVIEYAME-EARNLNHNYVGTEHLLLGLIREQEGVAAQVLMNLGLK 131
Query: 120 DEKAKE 125
E +E
Sbjct: 132 LEDVRE 137
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G++ E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLIREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 146
>gi|432350661|ref|ZP_19594017.1| ATP-binding subunit of ATP-dependent Clp protease, partial
[Rhodococcus wratislaviensis IFP 2016]
gi|430770005|gb|ELB86004.1| ATP-binding subunit of ATP-dependent Clp protease, partial
[Rhodococcus wratislaviensis IFP 2016]
Length = 584
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|451945151|ref|YP_007465787.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
gi|451904538|gb|AGF73425.1| endopeptidase Clp ATP-binding chain C [Corynebacterium halotolerans
YIM 70093 = DSM 44683]
Length = 884
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE--HP 66
L H GTE IL+G++ EG +AAK L + G++L VR E +I+G G P H
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESMGISLEDVRREVEEIIGHGS----QPHTGHI 57
Query: 67 PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T A++V++ ++ L+ G+ + LLLG+ E + ++L LG
Sbjct: 58 PFTPRAKKVLELSLREGLQMGHK-YIGTEFLLLGLIREGEGVAAQVLTKLG 107
>gi|357019920|ref|ZP_09082155.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
gi|356479956|gb|EHI13089.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
thermoresistibile ATCC 19527]
Length = 831
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|108804998|ref|YP_644935.1| ATPase [Rubrobacter xylanophilus DSM 9941]
gi|108766241|gb|ABG05123.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
Length = 834
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR H GTE +L+G+L E +AA+ L GVTL VR++ IVG G+
Sbjct: 15 LAQEEARHFNHNYIGTEHLLLGLLREEDGVAAQALNHLGVTLDDVREQVESIVGYGE--E 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T +++V++ A+ L+ G++ + +LLG+ E++ ++L+ L
Sbjct: 73 GSGSQAPFTPRSKKVLELALREALQLGHN-YIGTEHILLGLVRESEGVAARVLSNLDVDP 131
Query: 121 EKAK 124
+K +
Sbjct: 132 DKVR 135
>gi|83589034|ref|YP_429043.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
gi|83571948|gb|ABC18500.1| ATPases with chaperone activity, ATP-binding subunit [Moorella
thermoacetica ATCC 39073]
Length = 840
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA L+HP GTE IL+GIL EG S+AA+ L GV + VR+E K++ G+
Sbjct: 14 LAQEEALALRHPAIGTEHILLGILREGDSVAARALTNLGVNIKAVREEVRKVIRPGEAVV 73
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT A+RV++ A + + G + V LLLG+ E + ++L LG S
Sbjct: 74 GG--ELGLTPRAKRVLELANEEARRQGVN-YVGTEHLLLGLLEEGEGLAAQVLGGLGLSP 130
Query: 121 EKAKE 125
EK +E
Sbjct: 131 EKIRE 135
>gi|340356808|ref|ZP_08679449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
gi|339620146|gb|EGQ24717.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Sporosarcina
newyorkensis 2681]
Length = 817
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD--- 57
+ + EA +LKH + GTE IL+G++ EG +AAK L A V + E +VG G
Sbjct: 18 LAQEEAIRLKHESIGTEHILLGLIREGGGIAAKALDAISVNADTIEREVEALVGVGSKDV 77
Query: 58 --FFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
++P A+RVI+ +VD K G+S + +LL + E + ++L
Sbjct: 78 GPIVHYTPR-------AKRVIELSVDESRKLGHS-YIGTEHILLALIREGEGVAARVLNN 129
Query: 116 LGFSDEKAKE--LESLSSEPGSV 136
G S KA++ L+ L ++ SV
Sbjct: 130 AGVSLNKARQQVLQLLGNDESSV 152
>gi|333992525|ref|YP_004525139.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
gi|333488493|gb|AEF37885.1| ATP-dependent protease ATP-binding subunit ClpC1 [Mycobacterium sp.
JDM601]
Length = 821
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLTRVRQQVIQLL 121
>gi|379706683|ref|YP_005261888.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
gi|374844182|emb|CCF61244.1| protein disaggregation chaperone [Nocardia cyriacigeorgica GUH-2]
Length = 830
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|444433681|ref|ZP_21228818.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
gi|443885471|dbj|GAC70539.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia soli
NBRC 108243]
Length = 828
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|308232509|ref|ZP_07416289.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308371394|ref|ZP_07424826.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308372592|ref|ZP_07429192.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308373956|ref|ZP_07434280.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308374925|ref|ZP_07442106.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308376170|ref|ZP_07437892.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308378380|ref|ZP_07482390.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308379552|ref|ZP_07486731.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308380740|ref|ZP_07490948.2| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
gi|308213724|gb|EFO73123.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu001]
gi|308328891|gb|EFP17742.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu003]
gi|308332729|gb|EFP21580.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu004]
gi|308343544|gb|EFP32395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu006]
gi|308348011|gb|EFP36862.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu007]
gi|308351952|gb|EFP40803.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu008]
gi|308352738|gb|EFP41589.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu009]
gi|308356587|gb|EFP45438.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu010]
gi|308360544|gb|EFP49395.1| ATP-dependent protease ATP-binding subunit clpC1 [Mycobacterium
tuberculosis SUMu011]
Length = 827
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|397734515|ref|ZP_10501221.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
gi|396929638|gb|EJI96841.1| negative regulator of genetic competence clpC/mecB [Rhodococcus sp.
JVH1]
Length = 824
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|118466434|ref|YP_879836.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
gi|254773513|ref|ZP_05215029.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium subsp. avium ATCC 25291]
gi|118167721|gb|ABK68618.1| negative regulator of genetic competence ClpC/mecB [Mycobacterium
avium 104]
Length = 822
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + G++L VR + +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLL 121
>gi|374294995|ref|YP_005045186.1| chaperone ATPase [Clostridium clariflavum DSM 19732]
gi|359824489|gb|AEV67262.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
clariflavum DSM 19732]
Length = 810
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A L H GTE +L+G++ EG+ +AAK L G+T KV E +++G G+ ++ E
Sbjct: 20 AMALGHNYVGTEHLLLGLIKEGSGVAAKVLQNQGITEEKVLKEIEELIGHGE---YTGEQ 76
Query: 66 P-PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
P T +RV++ + + G++ + LL+GI E +S +IL LG +K
Sbjct: 77 PLGFTPRTKRVLELSFREARRMGHN-YIGTEHLLIGILKEGESVAVRILMDLGLEPQK 133
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKI 52
EAR++ H GTE +L+GIL EG S+A + L G+ K+ E +K+
Sbjct: 94 EARRMGHNYIGTEHLLIGILKEGESVAVRILMDLGLEPQKLYSEVLKM 141
>gi|421611123|ref|ZP_16052274.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
gi|408497937|gb|EKK02445.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SH28]
Length = 859
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSG------PE 72
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ ++ N V +LLG+ E + ++L LG
Sbjct: 73 MVTVGKLPQTPRAKKVIEYSMEEA-RNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLK 131
Query: 120 DEKAKE 125
E +E
Sbjct: 132 LEDVRE 137
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 146
>gi|118411220|ref|YP_874614.1| ATP-dependent clp protease ATP-binding subunit [Thalassiosira
pseudonana]
gi|116739967|gb|ABK20837.1| ATP-dependent clp protease ATP-binding subunit [Thalassiosira
pseudonana]
Length = 904
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+R++ H GTE +L+GIL + +A + L VTL K R E K +G+G F
Sbjct: 15 LAQEESRRMGHNFVGTEQVLLGILGQRHGIAGRALAQLNVTLKKTRKEVEKYIGRGTGFV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A+RV++ ++ H+ + V +LL + +E D + L L +
Sbjct: 75 AS--EIPFTPRAKRVLEMSI-HEAQDLGVNYVGTEHILLSLLNEADGIALRTLDRLRVNI 131
Query: 121 EKAKEL 126
K + L
Sbjct: 132 PKLRHL 137
>gi|417304237|ref|ZP_12091266.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|440716927|ref|ZP_20897429.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
gi|327539449|gb|EGF26064.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica WH47]
gi|436437995|gb|ELP31577.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
baltica SWK14]
Length = 847
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 7 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSG------PE 60
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ ++ N V +LLG+ E + ++L LG
Sbjct: 61 MVTVGKLPQTPRAKKVIEYSMEEA-RNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLK 119
Query: 120 DEKAKE 125
E +E
Sbjct: 120 LEDVRE 125
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 83 EARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 134
>gi|449134535|ref|ZP_21770031.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
gi|448886810|gb|EMB17203.1| negative regulator of genetic competence clpC/mecB [Rhodopirellula
europaea 6C]
Length = 847
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 7 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSG------PE 60
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ ++ N V +LLG+ E + ++L LG
Sbjct: 61 MVTVGKLPQTPRAKKVIEYSMEEA-RNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLK 119
Query: 120 DEKAKE 125
E +E
Sbjct: 120 LEDVRE 125
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 83 EARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 134
>gi|32474446|ref|NP_867440.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula
baltica SH 1]
Length = 859
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKLVQSG------PE 72
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ ++ N V +LLG+ E + ++L LG
Sbjct: 73 MVTVGKLPQTPRAKKVIEYSMEEA-RNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLK 131
Query: 120 DEKAKE 125
E +E
Sbjct: 132 LEDVRE 137
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHSYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 146
>gi|365825915|ref|ZP_09367863.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces
graevenitzii C83]
gi|365257396|gb|EHM87440.1| ATP-dependent Clp protease ATP-binding subunit [Actinomyces
graevenitzii C83]
Length = 848
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L + VTL K R + V+I+G+G +P
Sbjct: 19 EARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDVTLDKARAQVVEIIGEGQ---SAPS 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSE 104
H P T A++V++ ++ L+ ++ + +LLG+ E
Sbjct: 76 GHIPFTPRAKKVLELSLREALQLSHN-YIGTEHILLGLLRE 115
>gi|91200776|emb|CAJ73829.1| strongly similar to negative regulator of genetic competence
ClpC/MecB [Candidatus Kuenenia stuttgartiensis]
Length = 826
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+ H GTE IL+G++ EG+ +AA L V L K+R E KIV +G S
Sbjct: 19 EARRFNHEYIGTEHILLGLVKEGSGVAANVLQNLDVELKKIRIEIEKIV-QGGSDLVSVG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T ++V+++A++ G++ + LLLG+ E + ++L LG + +
Sbjct: 78 QLPFTPRVKKVLEYAMEEARALGHN-YIGTEHLLLGLLKEQEGVAAQVLLNLGVKPAEVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR L H GTE +L+G+L E +AA+ L GV +VR+E + ++G
Sbjct: 95 EARALGHNYIGTEHLLLGLLKEQEGVAAQVLLNLGVKPAEVREEVIGLLG 144
>gi|345858493|ref|ZP_08810886.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
gi|344328512|gb|EGW39897.1| negative regulator of genetic competence clpC/mecB
[Desulfosporosinus sp. OT]
Length = 813
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+++ H GTE IL+G++ EG +AA+ L G+ L K+R + +I G G F
Sbjct: 19 EAKRMGHQVVGTEHILLGLIQEGEGIAAQALTGMGLDLDKIRGQVEQIAGVGQPFNGE-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
LT +RV++ A + + + + LLLG+ E + +ILA L S EK
Sbjct: 77 -VGLTPRVKRVLELA-NEETHRQDVNYIGTEHLLLGLIMEGEGIAARILANLNVSPEK 132
>gi|312144275|ref|YP_003995721.1| ATPase AAA-2 domain-containing protein [Halanaerobium
hydrogeniformans]
gi|311904926|gb|ADQ15367.1| ATPase AAA-2 domain protein [Halanaerobium hydrogeniformans]
Length = 817
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ E EA KLKH GTE IL G++ EG +AA+ L NG++ V ++ ++GKG
Sbjct: 15 IAEQEALKLKHSYVGTEHILYGLIAEGQGIAARALIDNGISRDIVENKIEDMIGKGQNEV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
LT +++V++ A+D K G++ + LLLG+ E + +IL L
Sbjct: 75 KGS--IGLTPRSKKVLNLAMDEARKMGHNY-IGTEHLLLGLIREGEGVAVRILMDLNSDI 131
Query: 121 EKAKE 125
+ KE
Sbjct: 132 KNIKE 136
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARK+ H GTE +L+G++ EG +A + L + +++E V ++G
Sbjct: 94 EARKMGHNYIGTEHLLLGLIREGEGVAVRILMDLNSDIKNIKEEVVDLLG 143
>gi|404330422|ref|ZP_10970870.1| class III stress response-related ATPase [Sporolactobacillus vineae
DSM 21990 = SL153]
Length = 815
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A ++ K++ E ++G+G
Sbjct: 16 LSQEEAIRLGHNNIGTEHILLGLVREGDGIAAKALLALNLSPEKIQKEVEALIGRGSETV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+P + P A+RVI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QNPHYTP---RAKRVIELSMDEARKIGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARK+ H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 94 EARKIGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 143
>gi|15896437|ref|NP_349786.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
gi|337738395|ref|YP_004637842.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
gi|384459905|ref|YP_005672325.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|15026259|gb|AAK81126.1|AE007814_4 ATPases with chaperone activity clpC, two ATP-binding domain
[Clostridium acetobutylicum ATCC 824]
gi|325510594|gb|ADZ22230.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium acetobutylicum EA 2018]
gi|336293592|gb|AEI34726.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
Length = 813
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ KH GTE IL+GIL + A L GVT+ KVR + G GD + E
Sbjct: 20 EAQNFKHGYVGTEHILLGILRDENGKAQSLLANMGVTIEKVRRLIEEYEGFGDSDLYK-E 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PPLT +R+++ ++ + ++ N + +LL + E++ IL LG E+ +
Sbjct: 79 EPPLTPRTKRLLEISL-LEARNLNHNYINPEHVLLALIRESEGVAFTILGNLGVDFERLR 137
Query: 125 E--LESLS 130
+ L+SLS
Sbjct: 138 KEILDSLS 145
>gi|113476358|ref|YP_722419.1| hypothetical protein Tery_2763 [Trichodesmium erythraeum IMS101]
gi|110167406|gb|ABG51946.1| TPR repeat containing protein [Trichodesmium erythraeum IMS101]
Length = 1711
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L H TE IL+G++ EGT +AAK L GV L R E KI+G+G
Sbjct: 173 LAQDEARRLGHDFVETEQILLGLIGEGTGVAAKVLKYMGVNLKDARIEVEKIIGRGSGDV 232
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P A+ V++++++ + G++ + LLLG+ E + ++L LG
Sbjct: 233 --EAEIPFAPRAKTVLEFSLEEAQQLGHN-YIGTEHLLLGLIREGEGVAVRVLENLGVDL 289
Query: 121 EKAKEL 126
K L
Sbjct: 290 SKVPTL 295
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H TE IL+G++ EGT +AAK L + GV+L R E KI+G+G
Sbjct: 15 LAQHEAGRLGHNFVDTEQILLGLIGEGTGVAAKVLKSMGVSLKDARIEVEKIIGRGSGDV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P A+ V++++ + + G++ + LLLG+ E + ++L LG
Sbjct: 75 --EAEIPFAPRAKTVLEFSSEEAQQLGHN-YIGTEHLLLGLIREGEGVAVRVLENLGVDL 131
Query: 121 EKAKEL 126
K L
Sbjct: 132 SKVPTL 137
>gi|219848346|ref|YP_002462779.1| ATPase AAA-2 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219542605|gb|ACL24343.1| ATPase AAA-2 domain protein [Chloroflexus aggregans DSM 9485]
Length = 834
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR HP GTE IL+G++ E +AA+ L GV L + R IVG G+ + +
Sbjct: 22 EARAFNHPYIGTEHILLGLIRESEGIAARVLDELGVKLPQARSAVEFIVGPGESTLVTDQ 81
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT AQ+VI +A++ + N + LLLG+ + +L LG S E+ +
Sbjct: 82 E--LTARAQKVIKYAIEEANRL-NHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVR 138
>gi|427734209|ref|YP_007053753.1| transcriptional regulator [Rivularia sp. PCC 7116]
gi|427369250|gb|AFY53206.1| putative transcriptional regulator [Rivularia sp. PCC 7116]
Length = 394
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFS-PE 64
R+L + GTE IL+G L E T +A + L GV VR+ VK++GK + PE
Sbjct: 263 VRELNYDFYGTEGILLGFLAEDTGVATQVLKTAGVDFETVRNLIVKLLGKRTLGELTLPE 322
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPG 109
P +RV + A + KSG + + DLLLGI E G
Sbjct: 323 KIPFAPRMKRVFELARESANKSGKE-RIDSGDLLLGILEEAKRGG 366
>gi|430747124|ref|YP_007206253.1| chaperone ATPase [Singulisphaera acidiphila DSM 18658]
gi|430018844|gb|AGA30558.1| ATPase with chaperone activity, ATP-binding subunit [Singulisphaera
acidiphila DSM 18658]
Length = 842
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE +L+G++ EG+ +AA L V L K+R+E KIV G +
Sbjct: 19 EAQRFNHEYVGTEHVLLGLIKEGSGVAANVLKNLDVDLRKIRNEVEKIVQAGP-DMVTMG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI++A++ + ++ N V LLLG+ E + ++L L ++ +
Sbjct: 78 KLPQTPRAKKVIEYAIE-EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLNLKLDEVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G+L E +AA+ L + L +VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLNLKLDEVREEVLNLLGHG 146
>gi|428223611|ref|YP_007107708.1| ATPase [Geitlerinema sp. PCC 7407]
gi|427983512|gb|AFY64656.1| ATPase AAA-2 domain protein [Geitlerinema sp. PCC 7407]
Length = 822
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE IL+G+L +S AA+ L GVT R E I+G+G P
Sbjct: 19 EARRLGHSFIGTEQILLGVLRVESSPAARLLTDMGVTAAAARREVEGIIGRGSGIV--PA 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T ++V + A+ ++ + VT +LL + DS K+L LG + +
Sbjct: 77 DIPPTPRTRQVFEQAL-QGVQQESQAYVTPEHILLSLVQAGDSVAAKVLTNLGVDLAEVR 135
Query: 125 E-LESLSSEPGSV 136
+ L++L ++P +
Sbjct: 136 DRLQALMADPAEM 148
>gi|408355460|ref|YP_006843991.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
gi|407726231|dbj|BAM46229.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Amphibacillus
xylanus NBRC 15112]
Length = 811
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A + K+++E ++G G
Sbjct: 16 LSQEEAIRLGHHNIGTEHILLGLIREGEGIAAKALHALNLEKDKIQEEVEALIGVGSQTS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G++ V +LLG+ E + ++L LG S
Sbjct: 76 QALHYTP---RAKKVIELSMDEARKLGHT-YVGTEHILLGLIREGEGIAARVLNNLGVSL 131
Query: 121 EKAKE 125
+A++
Sbjct: 132 NRARQ 136
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ EG +AA+ L GV+L + R + ++++G +
Sbjct: 94 EARKLGHTYVGTEHILLGLIREGEGIAARVLNNLGVSLNRARQQVLQLLGSNE 146
>gi|159465053|ref|XP_001690745.1| hypothetical protein CHLREDRAFT_110360 [Chlamydomonas
reinhardtii]
gi|158269117|gb|EDO95778.1| predicted protein [Chlamydomonas reinhardtii]
Length = 97
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G++ E T +AAK L + GV L R E KI+G+G F
Sbjct: 19 EARRLGHNFVGTEQLLLGLIGESTGIAAKVLKSMGVNLKDARVEVEKIIGRGSGFV--AV 76
Query: 65 HPPLTEDAQRVIDWAVDH 82
P T A+RV++ +++
Sbjct: 77 EIPFTPRAKRVLEMSLEE 94
>gi|147676618|ref|YP_001210833.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
gi|146272715|dbj|BAF58464.1| ATPase with chaperone activity, ATP-binding subunit [Pelotomaculum
thermopropionicum SI]
Length = 810
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV--GKGDFFFFS 62
EA+ +P GTE +L+G++ EG +AA+ L + GV KVR ++V KG
Sbjct: 19 EAKSASYPYVGTEHLLLGLIREGEGVAARALASLGVDADKVRTAVAQMVEPAKGQ----P 74
Query: 63 PEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
P LT A+RV++ +VD + G++ V LLLG+ E + +IL A G K
Sbjct: 75 PVELVLTPRAKRVLELSVDEARRMGHN-YVGTEHLLLGLIREGEGVAAQILNAFGADYRK 133
Query: 123 AKEL 126
+ +
Sbjct: 134 VRTI 137
>gi|163848025|ref|YP_001636069.1| ATPase [Chloroflexus aurantiacus J-10-fl]
gi|222525912|ref|YP_002570383.1| ATPase AAA-2 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669314|gb|ABY35680.1| ATPase AAA-2 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222449791|gb|ACM54057.1| ATPase AAA-2 domain protein [Chloroflexus sp. Y-400-fl]
Length = 833
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR HP GTE IL+G++ E +AA+ L GV L + R IVG G+ + +
Sbjct: 22 EARAFNHPYIGTEHILLGLIRESEGIAARVLDELGVKLPQARSAVEFIVGPGESTMVTDQ 81
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT AQ+VI +A++ + N + LLLG+ + +L LG S E+ +
Sbjct: 82 E--LTARAQKVIKYAIEEANRL-NHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVR 138
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EA +L H GTE +L+G++ G +A L GV+L +VR++ ++++ G
Sbjct: 97 EANRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRNQVMRVLRHG 148
>gi|20808693|ref|NP_623864.1| chaperone ATPase [Thermoanaerobacter tengcongensis MB4]
gi|254478740|ref|ZP_05092109.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
gi|20517331|gb|AAM25468.1| ATPases with chaperone activity, ATP-binding subunit
[Thermoanaerobacter tengcongensis MB4]
gi|214035305|gb|EEB76010.1| ATPase, AAA family [Carboxydibrachium pacificum DSM 12653]
Length = 816
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYEATREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ V +LLG+ E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYVGTEHILLGLLREGEGVAVRILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEPGS 135
G + +E ++ LS EP +
Sbjct: 129 GIDFNRVREEIVKMLSEEPAA 149
>gi|414153535|ref|ZP_11409858.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411454933|emb|CCO07762.1| Negative regulator of genetic competence ClpC/MecB
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 814
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+LK+P GTE IL+G++ EG +AAK L ++ KVR ++V G+
Sbjct: 15 LAQEEARRLKYPYIGTEHILLGLIREGEGIAAKVLAQLNISADKVRTAVEQMVETGNQTV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNS 89
P P T A+RV++ AV+ + G++
Sbjct: 75 --PADIPPTPRAKRVLELAVEESRRLGHN 101
>gi|256826231|ref|YP_003150191.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
gi|256689624|gb|ACV07426.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
sedentarius DSM 20547]
Length = 866
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD-----FF 59
EAR L H GTE IL+G++ EG +AA+ L G++L VR++ +++G+G
Sbjct: 19 EARMLNHNYLGTEHILLGLIHEGEGIAAQALENLGISLDAVREQVQEVIGQGKQAPSGHI 78
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG-- 117
FSP A++V++ ++ L+ G+ + +LLG+ E + ++L LG
Sbjct: 79 SFSPR-------AKKVLELSLREGLQLGHQ-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 118 FSDEKAKELESLSSEPG 134
S + + +E LS G
Sbjct: 131 LSTVRQQVIELLSGYQG 147
>gi|434398661|ref|YP_007132665.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
gi|428269758|gb|AFZ35699.1| ATPase AAA-2 domain protein [Stanieria cyanosphaera PCC 7437]
Length = 788
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR H G+E +L+G++ EGTS+AA L G+ + + R + G+G
Sbjct: 15 LAQEEARSTGHNLVGSEHLLLGVIGEGTSIAATVLADKGINVNQTRKLIEQYSGRGS--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
FSP + P T + + D A+ + + + +T + +LL I ++DS K+L G
Sbjct: 73 FSPANLPFTPKVKSIFDQALI-EARQLDRKNITPAHILLAIAKDSDSVAAKVLIQQG 128
>gi|385653550|ref|ZP_10048103.1| ATP-dependent Clp protease, ATP-binding subunit [Leucobacter
chromiiresistens JG 31]
Length = 841
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L ++L VR + I+G G
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALEQLEISLDAVRAQVTDIIGTGQ--- 71
Query: 61 FSPE--HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 -QPPAGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQTVIQLL 142
>gi|338813698|ref|ZP_08625791.1| clpc ATPase [Acetonema longum DSM 6540]
gi|337274331|gb|EGO62875.1| clpc ATPase [Acetonema longum DSM 6540]
Length = 811
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ EA + +H GTE +L+G++ EG +AAK L A V V+++ + +G G
Sbjct: 15 LARQEAIRFRHGYIGTEHLLLGLIKEGGGVAAKALEALDVDAETVQEQIEQAIGYGQ--- 71
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P LT +++V++ AV H + G++ V LLLG+ SE D ++L +LG
Sbjct: 72 EQPGEVVLTPRSKKVLELAVQHAQQMGHN-YVGTEHLLLGLISEGDGVAAQVLVSLG 127
>gi|325109333|ref|YP_004270401.1| ATPase AAA [Planctomyces brasiliensis DSM 5305]
gi|324969601|gb|ADY60379.1| ATPase AAA-2 domain protein [Planctomyces brasiliensis DSM 5305]
Length = 849
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E KIV G +
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKIVQTGP-DMVTMG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI++A++ + ++ N V LLLG+ E + ++L LG E +
Sbjct: 78 KLPQTPRAKKVIEYAME-EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLGMKLEDVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLGMKLEDVREEVLNLLGHG 146
>gi|403525254|ref|YP_006660141.1| ATP-dependent Clp protease ATP-binding subunit [Arthrobacter sp.
Rue61a]
gi|403227681|gb|AFR27103.1| putative ATP-dependent Clp protease ATP-binding subunit
[Arthrobacter sp. Rue61a]
Length = 809
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|148655866|ref|YP_001276071.1| ATPase [Roseiflexus sp. RS-1]
gi|148567976|gb|ABQ90121.1| ATPase AAA-2 domain protein [Roseiflexus sp. RS-1]
Length = 845
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR HP GTE +L+G++ EG +AA+ L GV L + R IVG G+ +P
Sbjct: 23 EARAFNHPYIGTEHLLLGLIREGEGVAARVLDELGVKLVQARHAVEFIVGHGE---GAPR 79
Query: 65 HP-PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
LT A++VI +AV+ + K N + LLLG+ + +L LG S E+
Sbjct: 80 QDLELTARAKKVIAYAVE-EAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQV 138
Query: 124 K 124
+
Sbjct: 139 R 139
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EA++L H GTE +L+G++ G +A L GV+L +VR ++++ +G
Sbjct: 98 EAKRLNHHYIGTEHLLLGLVRNGEGVATGVLDILGVSLEQVRTNVMRVLRQG 149
>gi|444306034|ref|ZP_21141807.1| ATPase [Arthrobacter sp. SJCon]
gi|443481608|gb|ELT44530.1| ATPase [Arthrobacter sp. SJCon]
Length = 809
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE-HPP 67
L H GTE IL+G++ EG +AAK L + ++L VR++ +I+G+G +P H P
Sbjct: 2 LNHNYIGTEHILLGLIHEGEGVAAKALESLSISLDGVREQVQEIIGQGQ---QAPSGHIP 58
Query: 68 LTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 59 FTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 107
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 73 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 121
>gi|410867351|ref|YP_006981962.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
gi|410823992|gb|AFV90607.1| Negative regulator of genetic competence ClpC/MecB
[Propionibacterium acidipropionici ATCC 4875]
Length = 841
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G+ +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGN---NTPA 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
>gi|222152129|ref|YP_002561289.1| stress response-related Clp ATPase ClpC [Macrococcus caseolyticus
JCSC5402]
gi|222121258|dbj|BAH18593.1| truncated stress response-related Clp ATPase ClpC [Macrococcus
caseolyticus JCSC5402]
Length = 226
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L A +T KV E +++G G + +
Sbjct: 19 EAIRLNHNNIGTEHLLLGLVKEPDGIAAKVLAAYNITEDKVVSEVEQLIGHGTDMGGTIQ 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K N V +LLG+ E + ++LA L + KA+
Sbjct: 79 YTP---RAKKVIELSLDEARKL-NHNFVGTEHILLGLIRENEGVAARVLANLDLNITKAR 134
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDF------ 58
EARKL H GTE IL+G++ E +AA+ L + + K R + VK++G +
Sbjct: 93 EARKLNHNFVGTEHILLGLIRENEGVAARVLANLDLNITKARSQVVKLLGSPEMAGKDAN 152
Query: 59 FFFSPEHPPLTEDAQRVIDWAVDHKLKS--GNSGEVT 93
S P L E A+ + A D L G S E+T
Sbjct: 153 ASKSQNTPTLDELARDLTVIAKDGTLDPVIGRSAEIT 189
>gi|366163201|ref|ZP_09462956.1| ATPase AAA-2 [Acetivibrio cellulolyticus CD2]
Length = 810
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A L H GTE +L+G++ EG+ +AAK L G+T KV E +++G GD S
Sbjct: 20 AMTLGHNYVGTEHLLLGLIKEGSGVAAKVLQNQGITEDKVLKEIEELIGHGD----STGE 75
Query: 66 PPL--TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
PL T +RV++ + + G++ + LL+GI E +S +IL LG +K
Sbjct: 76 QPLGFTPRTKRVLELSFREARRMGHN-YIGTEHLLVGILKEGESVAVRILMDLGLEPQK 133
>gi|376259729|ref|YP_005146449.1| chaperone ATPase [Clostridium sp. BNL1100]
gi|373943723|gb|AEY64644.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
sp. BNL1100]
Length = 810
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEHPPL 68
L H GTE IL+G++ EGT +AA+ L G+T K+ E +++GKGD P
Sbjct: 23 LGHNYVGTEHILLGLVKEGTGVAARVLQGQGITEEKILKEIEELIGKGDAEGTQP--VGF 80
Query: 69 TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T +RV++ A + G G + LLLGI E +S +I+ LG +K
Sbjct: 81 TPRTKRVLELAFKEARRMGQ-GYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQK 133
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EAR++ GTE +L+GI+ EG S+A + + GV K+ +E VKI+
Sbjct: 94 EARRMGQGYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQKLLNELVKIL 142
>gi|406830128|ref|ZP_11089722.1| ATPase AAA [Schlesneria paludicola DSM 18645]
Length = 838
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E KIV G +
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLEVDLRKIRLEVEKIVQSGP-DMVTMG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++V+++A++ + ++ N V LLLG+ E + ++L LG E +
Sbjct: 78 KLPQTPRAKKVVEYAME-EARNLNHNYVGTEHLLLGLIREQEGVAAQVLMNLGLKLEDVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G++ E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLIREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 146
>gi|297171252|gb|ADI22259.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_36I24]
gi|297171364|gb|ADI22368.1| hypothetical protein [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 827
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ EG +AA L V L +V D + V KG+
Sbjct: 15 MAREEAIRLQHDYVGTEHILLGLIREGEGVAAAVLANFDVDLNQVHDRVEESVKKGNATI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V+++A+ + + N V +LLG+ E ++L +LG +
Sbjct: 75 ALGE-LPYTSRAKKVLEFAM-AEAREFNHSYVGTEHMLLGLIREERGIAAQVLDSLGVNL 132
Query: 121 E--KAKELESLSSEPGS 135
E +A+ ++ L SE GS
Sbjct: 133 ETARAEVVKILGSEFGS 149
>gi|257057942|ref|YP_003135830.1| AAA ATPase [Cyanothece sp. PCC 8802]
gi|256588108|gb|ACU98994.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8802]
Length = 789
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+ GTE +L+G++ EGTS+ + L G+TL + R +I GKG
Sbjct: 15 LSQEEARRTGQNLVGTEHLLLGLIGEGTSITSMVLEEFGLTLAQTRYTIDQIRGKGG--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
FSP + P T +R+++ A ++ + G+ V +LL + S++++ K+L G
Sbjct: 73 FSPANIPFTPIVKRILEQAFNNSRQEGDR-YVNPEHILLALISDSNTVAAKVLNLQG 128
>gi|218244917|ref|YP_002370288.1| ATPase AAA [Cyanothece sp. PCC 8801]
gi|218165395|gb|ACK64132.1| ATPase AAA-2 domain protein [Cyanothece sp. PCC 8801]
Length = 789
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+ GTE +L+G++ EGTS+ + L G+TL + R +I GKG
Sbjct: 15 LSQEEARRTGQNLVGTEHLLLGLIGEGTSITSMVLEEFGLTLAQTRYTIDQIRGKGG--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
FSP + P T +R+++ A ++ + G+ V +LL + S++++ K+L G
Sbjct: 73 FSPANIPFTPIVKRILEQAFNNSRQEGDR-YVNPEHILLALISDSNTVAAKVLNLQG 128
>gi|433607762|ref|YP_007040131.1| hypothetical protein BN6_60020 [Saccharothrix espanaensis DSM
44229]
gi|407885615|emb|CCH33258.1| hypothetical protein BN6_60020 [Saccharothrix espanaensis DSM
44229]
Length = 273
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA L H GTE +L+G+L+E + AA+ L + G++ V IVG+G
Sbjct: 19 EAELLHHGYIGTEHLLIGLLLERSGSAARVLMSLGLSPQHCVRHVVDIVGRGREQVRG-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
H P T A+R +D AV G+ G ++ LLLG+ E + ++L S + A+
Sbjct: 77 HLPFTPRAKRAMDQAVRQATALGH-GRISTEHLLLGVLDEDEGVAAEVLVRSAVSLDDAR 135
Query: 125 E 125
E
Sbjct: 136 E 136
>gi|427421597|ref|ZP_18911780.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
gi|425757474|gb|EKU98328.1| ATPase with chaperone activity, ATP-binding subunit [Leptolyngbya
sp. PCC 7375]
Length = 820
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H G+E +L+GI+ EG+S+AA+ L GV L R E I+G+G P
Sbjct: 19 EARRLGHNFVGSEQLLLGIVKEGSSIAARVLSDFGVNLANSRAEVESIIGRGS--GNGPT 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P T ++V + A K + + LLL + +S +++L LG
Sbjct: 77 EIPFTPKVKQVFEQAFQEARKLDHP-YIEPEHLLLSLTQNLESVAYRVLTNLG 128
>gi|428208439|ref|YP_007092792.1| Clp domain-containing protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010360|gb|AFY88923.1| Clp domain protein [Chroococcidiopsis thermalis PCC 7203]
Length = 289
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E+++LKH GTE +L+GI+ E + + + L A GV R E K +G+G
Sbjct: 161 LAQYESKRLKHHYIGTEQLLLGIIGEQSGMTTRVLTAMGVNFENTRAEVEKRIGRGT--- 217
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
SP P T A++ ++ A+ + + + LLLGI E +L LG
Sbjct: 218 GSPPEIPFTPRARQCLELALT-EAREFKHRHIGTEHLLLGILREGQGMAVIVLGNLG 273
>gi|419760923|ref|ZP_14287185.1| ClpC ATPase [Thermosipho africanus H17ap60334]
gi|407514014|gb|EKF48882.1| ClpC ATPase [Thermosipho africanus H17ap60334]
Length = 819
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-DFF 59
M + EA++L H GTE +L+ IL + L G+T K+R+E + IVG G F
Sbjct: 15 MAQEEAKELGHSYVGTEHLLLAILKINDNKIKSILENYGITYTKIRNEVISIVGMGMRGF 74
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
SP+ P A+RV + A + KS ++ L LGI E + IL +G
Sbjct: 75 IMSPQMTP---RAKRVTELAYEEA-KSLGENKIKPIHLFLGILREGEGIAVHILRKMGI 129
>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
inulinus CASD]
Length = 816
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A + K++ E ++G+G
Sbjct: 16 LSQEEAMRLGHNNIGTEHILLGLVREGDGIAAKALLALNLDPEKIQKEVEALIGRGTDEV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+P + P A+RVI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTPHYTP---RAKRVIELSMDEARKIGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARK+ H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 94 EARKIGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 143
>gi|297545353|ref|YP_003677655.1| ATPase [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296843128|gb|ADH61644.1| ATPase AAA-2 domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 816
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETTREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ + +LLGI E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYIGTEHILLGILREGEGVAVRILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEP 133
G + +E ++ L+ EP
Sbjct: 129 GIDFNRVREEIVKMLNEEP 147
>gi|283779663|ref|YP_003370418.1| ATPase AAA [Pirellula staleyi DSM 6068]
gi|283438116|gb|ADB16558.1| ATPase AAA-2 domain protein [Pirellula staleyi DSM 6068]
Length = 852
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDVDLRKIRLEVEKLVQSG------PE 72
Query: 65 -----HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ + ++ N V +LLG+ E + ++L LG
Sbjct: 73 MVTMGKLPQTPRAKKVIEYSME-EARNLNHNYVGTEHILLGLLREQEGVAAQVLMNLGLK 131
Query: 120 DEKAKE 125
E+ +E
Sbjct: 132 LEEVRE 137
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L +VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHILLGLLREQEGVAAQVLMNLGLKLEEVREEVLNLLGHG 146
>gi|383765463|ref|YP_005444444.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
gi|381385731|dbj|BAM02547.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Phycisphaera
mikurensis NBRC 102666]
Length = 877
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-DFFFFSP 63
EA++ H GTE +L+G++ EG+ + A L V L +VR E K+V G D
Sbjct: 19 EAQRFNHEYIGTEHVLLGLVKEGSGVGANVLKNLDVDLRRVRLEVEKLVKSGPDMVTMG- 77
Query: 64 EHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
P T A++VI+++++ ++ N V LLLG+ E + ++L LG ++
Sbjct: 78 -KLPQTPRAKKVIEYSIEEA-RNLNHNYVGTEHLLLGLLREHEGVAAQVLMNLGLKLDEV 135
Query: 124 KE 125
+E
Sbjct: 136 RE 137
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE +L+G+L E +AA+ L G+ L +VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHLLLGLLREHEGVAAQVLMNLGLKLDEVREEVLNLLGAG 146
>gi|289579183|ref|YP_003477810.1| ATPase AAA [Thermoanaerobacter italicus Ab9]
gi|289528896|gb|ADD03248.1| ATPase AAA-2 domain protein [Thermoanaerobacter italicus Ab9]
Length = 816
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKENEGIAARTLKKLGVTYETTREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ + +LLGI E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYIGTEHILLGILREGEGVAVRILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEP 133
G + +E ++ L+ EP
Sbjct: 129 GIDFNRVREEIVKMLNEEP 147
>gi|317123126|ref|YP_004103129.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315593106|gb|ADU52402.1| ATPase AAA-2 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 839
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L + GTE +L+G++ EGT +AAK L + G+ L +VR E KI+G+G+
Sbjct: 15 LAQEEARRLNYNYVGTEHLLLGLIREGTGIAAKALQSLGINLEQVRAEVEKIIGRGN--- 71
Query: 61 FSPEHPPL--TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P + T A++V+ + + V +LLG+ E + K+L +G
Sbjct: 72 -GPIQGEIGYTPRAKKVVMELAPEEARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGA 130
Query: 119 SDEKAKE 125
++ ++
Sbjct: 131 DLDRVRQ 137
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR L H GTE IL+G++ EG +AAK L G L +VR +K++G
Sbjct: 95 EARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGADLDRVRQTVIKLLG 144
>gi|256752490|ref|ZP_05493347.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748625|gb|EEU61672.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 816
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETTREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ V +LLG+ E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYVGTEHILLGLLREGEGVAARILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEPG 134
G + +E ++ L+ EP
Sbjct: 129 GIDFNRVREEIVKMLNEEPA 148
>gi|427419135|ref|ZP_18909318.1| ClpA/ClpB family protein [Leptolyngbya sp. PCC 7375]
gi|425761848|gb|EKV02701.1| ClpA/ClpB family protein [Leptolyngbya sp. PCC 7375]
Length = 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR++ H GTE IL+G+L + + AA L +TL R E +I+G G F+
Sbjct: 19 EARRMGHNFVGTEQILLGMLADSDNAAANVLSERAITLEDARQEVEQIIGLGT--GFTDT 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSE 104
P T A+RV++ + K G+ + + LLLGI E
Sbjct: 77 QIPFTPRAKRVLEIGFEEAKKLGDE-HIEPNHLLLGIILE 115
>gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
gi|51857957|dbj|BAD42115.1| class III stress response-related ATPase [Symbiobacterium
thermophilum IAM 14863]
Length = 833
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 12/125 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDF-----F 59
EAR+L + GTE +L+G++ EG +AAK L + G+ L +VR E K++GKG
Sbjct: 19 EARRLNYDYVGTEHLLLGLIREGEGIAAKALQSLGIQLEQVRAEVEKMIGKGSASSRGEI 78
Query: 60 FFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
F+P + +++ A++ G++ V +LLG+ E + ++L LG
Sbjct: 79 GFTPRAKKV------MVELAIEEARLLGHN-YVGTEHILLGLIREGEGVAAQVLQNLGAD 131
Query: 120 DEKAK 124
E+ +
Sbjct: 132 LERVR 136
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE IL+G++ EG +AA+ L G L +VR++ + ++G
Sbjct: 95 EARLLGHNYVGTEHILLGLIREGEGVAAQVLQNLGADLERVRNQVIHLLG-------GVP 147
Query: 65 HPP 67
HPP
Sbjct: 148 HPP 150
>gi|298250036|ref|ZP_06973840.1| DNA binding domain protein, excisionase family [Ktedonobacter
racemifer DSM 44963]
gi|297548040|gb|EFH81907.1| DNA binding domain protein, excisionase family [Ktedonobacter
racemifer DSM 44963]
Length = 279
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA L H GTE +L+G++ E +A + L GV+L +V + I+GKGD
Sbjct: 97 LAQKEAVGLNHNYIGTEHLLLGLIKEEGGIAGRVLHEQGVSLEQVHERITSIIGKGD--K 154
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKIL 113
S LT +++VI++AVD + G+S V +LLG+ E + +L
Sbjct: 155 PSAGEGTLTPRSRKVIEYAVDEARRLGHSF-VGTEHILLGLIREGEGIAAHVL 206
>gi|410666747|ref|YP_006919118.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
gi|409104494|gb|AFV10619.1| chaperone protein ClpB [Thermacetogenium phaeum DSM 12270]
Length = 820
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L HP GTE +L+G+L EG +AA+ L A GV L KVR E KIV G+
Sbjct: 20 EARRLGHPAVGTEHLLLGLLREGEGIAARALQALGVDLDKVRKEVEKIVAPGEARLIG-- 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT A++V++ A + + G S V +LLG+ E + +IL A G S +K +
Sbjct: 78 EVGLTPRAKKVLELAQEEGRRQGVS-YVGTEHILLGLIREGEGVAARILLAQGLSLDKVR 136
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E R+ GTE IL+G++ EG +AA+ L A G++L KVR + + ++ G
Sbjct: 91 LAQEEGRRQGVSYVGTEHILLGLIREGEGVAARILLAQGLSLDKVRRQVLMLL--GGIGP 148
Query: 61 FSPEHP 66
SP HP
Sbjct: 149 VSPGHP 154
>gi|410582488|ref|ZP_11319594.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
gi|410505308|gb|EKP94817.1| ATPase with chaperone activity, ATP-binding subunit
[Thermaerobacter subterraneus DSM 13965]
Length = 834
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L + GTE +L+G++ EGT +AAK L + G+ L +VR E KI+G+G+
Sbjct: 15 LAQEEARRLNYNYVGTEHLLLGLIREGTGIAAKALQSLGINLEQVRAEVEKIIGRGN--- 71
Query: 61 FSPEHPPL--TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
P + T A++V+ + + V +LLG+ E + K+L +G
Sbjct: 72 -GPIQGEIGYTPRAKKVVMELAPEEARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGA 130
Query: 119 SDEKAKE 125
++ ++
Sbjct: 131 DLDRVRQ 137
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR L H GTE IL+G++ EG +AAK L G L +VR +K++G
Sbjct: 95 EARLLGHNYVGTEHILLGLIREGEGVAAKVLENMGADLDRVRQTVIKLLG 144
>gi|403669832|ref|ZP_10935008.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC8E]
Length = 817
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG-----K 55
+ + EA ++KH GTE IL+G++ EGT +AAK L A VT + + K+VG
Sbjct: 16 LAQEEAIRMKHEAIGTEHILLGLIREGTGIAAKALEAIEVTPEMIEEGIEKLVGVGTKDS 75
Query: 56 GDFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
G ++P A++VI+ +VD K G++ + +LL + E + ++L
Sbjct: 76 GPVVHYTPR-------AKKVIELSVDESRKLGHT-YIGTEHILLALIREGEGVAARVLNN 127
Query: 116 LGFSDEKAKE 125
G S KA++
Sbjct: 128 EGVSLSKARQ 137
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE IL+ ++ EG +AA+ L GV+L K R + ++++G D
Sbjct: 95 ESRKLGHTYIGTEHILLALIREGEGVAARVLNNEGVSLSKARQQVLQLLGSHD 147
>gi|385800597|ref|YP_005837001.1| ATPase [Halanaerobium praevalens DSM 2228]
gi|309389961|gb|ADO77841.1| ATPase AAA-2 domain protein [Halanaerobium praevalens DSM 2228]
Length = 806
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ E EA KLKH GTE IL G++ EG ++AA+ L NG+ V + ++++G+G+
Sbjct: 15 IAEQEALKLKHSYVGTEHILYGLVAEGQAIAARSLIDNGLKEEIVESKIIEMIGEGEDEV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
LT +++V++ A+D K G++ + LLLG+ E + +IL L
Sbjct: 75 EGS--IGLTPRSKKVLNLAMDEARKMGHNY-IGTEHLLLGLIREGEGVAVRILMDL 127
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARK+ H GTE +L+G++ EG +A + L + +++E + ++G
Sbjct: 94 EARKMGHNYIGTEHLLLGLIREGEGVAVRILMDLDTDISNIKEEIIDLLG 143
>gi|326391133|ref|ZP_08212679.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|345018568|ref|YP_004820921.1| ATPase AAA-2 domain-containing protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|392939610|ref|ZP_10305254.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
gi|325992832|gb|EGD51278.1| ATPase AAA-2 domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|344033911|gb|AEM79637.1| ATPase AAA-2 domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291360|gb|EIV99803.1| ATPase with chaperone activity, ATP-binding subunit
[Thermoanaerobacter siderophilus SR4]
Length = 816
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETTREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ V +LLG+ E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYVGTEHILLGLLREGEGVAVRILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEPG 134
G + +E ++ L+ EP
Sbjct: 129 GIDFNRVREEIVKMLNEEPA 148
>gi|297171206|gb|ADI22214.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
gi|297171322|gb|ADI22327.1| hypothetical protein [uncultured actinobacterium HF0500_01C15]
Length = 826
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ E ++AA+ L V L ++ D + V KG
Sbjct: 15 MAREEAIRLQHDYVGTEHILLGLIREEEAVAAQVLINLSVDLEQIHDRVEESVRKGKATI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V+++A+ + + N V LLLG+ E ++L +LG +
Sbjct: 75 ALGE-LPYTSRAKKVLEFAM-AEARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTL 132
Query: 121 EKAKE--LESLSSE 132
++A+E L+ L SE
Sbjct: 133 DEAREDTLKILGSE 146
>gi|335045358|ref|ZP_08538381.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
gi|333759144|gb|EGL36701.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 108 str. F0425]
Length = 818
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSPE 64
A + +H GTE IL+G++ EGT++A K L AN ++ K+ + K + G P
Sbjct: 19 AEECRHQYIGTEHILLGLVREGTAVAGKVLKANAISEDKIMEMIAKFISTDGKLSVADP- 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T A+RV++ A+ SG S V LLL I + + +I++ LG S +K
Sbjct: 78 -SGYTPSAKRVLEQAMQESRDSG-SRLVGTEHLLLAILKDGNCVASRIISTLGASTQK 133
>gi|167036769|ref|YP_001664347.1| ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039489|ref|YP_001662474.1| ATPase [Thermoanaerobacter sp. X514]
gi|307725185|ref|YP_003904936.1| ATPase [Thermoanaerobacter sp. X513]
gi|320115191|ref|YP_004185350.1| ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166853729|gb|ABY92138.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X514]
gi|166855603|gb|ABY94011.1| ATPase AAA-2 domain protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|307582246|gb|ADN55645.1| ATPase AAA-2 domain protein [Thermoanaerobacter sp. X513]
gi|319928282|gb|ADV78967.1| ATPase AAA-2 domain protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 816
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----G 56
+ + EAR H GTE IL+G+L E +AA+ L GVT R++ + ++G G
Sbjct: 17 LAQEEARSFYHNYVGTEHILLGLLKEDEGIAARVLKKLGVTYETTREKVLSLIGMGNIPG 76
Query: 57 DFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAAL 116
D ++P A+RV++ ++ + N+ V +LLG+ E + +IL
Sbjct: 77 DVVGYTPR-------AKRVLELSLSEA-RRFNTSYVGTEHILLGLLREGEGVAVRILMEQ 128
Query: 117 GFSDEKAKE--LESLSSEPG 134
G + +E ++ L+ EP
Sbjct: 129 GIDFNRVREEIVKMLNEEPA 148
>gi|379335397|gb|AFD03378.1| ATP-dependent Clp protease ATP-binding subunit ClpC, partial
[uncultured bacterium W5-51b]
Length = 438
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ EG +AA L V L V+++ + V KG
Sbjct: 16 MAREEASRLQHEYVGTEHILLGLIREGEGVAAAVLTNLNVDLDDVQEKIEETVKKGK--A 73
Query: 61 FSPEHP--PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
+P+ P P T A++V++ A+ + + N V LLLG+ E ++L+ G
Sbjct: 74 PAPDGPDLPYTTRAKKVLELAMS-EARELNHSYVGTEHLLLGLLREEKGIAAQVLSDAGV 132
Query: 119 SDEKAK--ELESLSSE 132
S EKA+ L L SE
Sbjct: 133 SLEKARAETLRLLGSE 148
>gi|320102509|ref|YP_004178100.1| ATPase AAA-2 domain-containing protein [Isosphaera pallida ATCC
43644]
gi|319749791|gb|ADV61551.1| ATPase AAA-2 domain protein [Isosphaera pallida ATCC 43644]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+G++ EG+ +AA L V L K+R E K+V G PE
Sbjct: 19 EAQRLNHEFIGTEHLLLGLVKEGSGVAANVLKNLDVDLKKIRIEVEKLVQPG------PE 72
Query: 65 -----HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++ ++A++ + ++ N V LLLG+ E + ++L L
Sbjct: 73 VVTIGRLPQTPRAKKATEYAIE-EARNFNHNYVGTEHLLLGLLREQEGVAAQVLINLNLK 131
Query: 120 DEKAKE 125
E+ +E
Sbjct: 132 LEEVRE 137
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR H GTE +L+G+L E +AA+ L + L +VR+E + ++G G
Sbjct: 95 EARNFNHNYVGTEHLLLGLLREQEGVAAQVLINLNLKLEEVREEVLNLLGHG 146
>gi|422468632|ref|ZP_16545163.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA3]
gi|314982588|gb|EFT26680.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA3]
Length = 783
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|168181833|ref|ZP_02616497.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|237796972|ref|YP_002864524.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Ba4 str. 657]
gi|182674884|gb|EDT86845.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum Bf]
gi|229263581|gb|ACQ54614.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum Ba4 str. 657]
Length = 811
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|168178801|ref|ZP_02613465.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
gi|182670016|gb|EDT81992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum NCTC 2916]
Length = 811
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|153940994|ref|YP_001392864.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|384463825|ref|YP_005676420.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
gi|152936890|gb|ABS42388.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. Langeland]
gi|295320842|gb|ADG01220.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum F str. 230613]
Length = 811
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|148381451|ref|YP_001255992.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 3502]
gi|153932782|ref|YP_001385826.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. ATCC 19397]
gi|153936468|ref|YP_001389233.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A str. Hall]
gi|387819793|ref|YP_005680140.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
gi|148290935|emb|CAL85071.1| negative regulator of genetic competence [Clostridium botulinum A
str. ATCC 3502]
gi|152928826|gb|ABS34326.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. ATCC 19397]
gi|152932382|gb|ABS37881.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A str. Hall]
gi|322807837|emb|CBZ05412.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB [Clostridium
botulinum H04402 065]
Length = 811
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|373253679|ref|ZP_09541797.1| ATP-dependent Clp protease ATP-binding subunit [Nesterenkonia sp.
F]
Length = 868
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + ++L VR++ + +G G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLDISLGGVREKVQEKIGPGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L L
Sbjct: 72 NAPSGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVELNAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVELNADLNKVRQQVIQLL 142
>gi|417932743|ref|ZP_12576081.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
gi|340774379|gb|EGR96866.1| Clp amino terminal domain protein [Propionibacterium acnes
SK182B-JCVI]
Length = 842
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G
Sbjct: 15 LAQDEAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+P H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 72 STPTGHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|350568861|ref|ZP_08937259.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
gi|348661104|gb|EGY77800.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Propionibacterium avidum ATCC 25577]
Length = 843
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|297171669|gb|ADI22663.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0500_22O06]
Length = 827
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ EG +A+ L V L ++ + + V KG
Sbjct: 15 MAREEAIRLQHDYVGTEHILLGLIREGDGVASAVLITLNVDLEQIHEHVEESVRKGKATI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V+++A+ + + N V LLLG+ E ++L +LG +
Sbjct: 75 ALGEL-PYTSRAKKVLEFAMS-EARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTL 132
Query: 121 EKAK 124
EKA+
Sbjct: 133 EKAR 136
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EAR H GTE +L+G+L E +AA+ L + GVTL K R E++K++G +
Sbjct: 95 EARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTLEKARGETLKVLGSSN 147
>gi|170757820|ref|YP_001783151.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum B1 str. Okra]
gi|429246823|ref|ZP_19210119.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
gi|169123032|gb|ACA46868.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum B1 str. Okra]
gi|428756157|gb|EKX78733.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum CFSAN001628]
Length = 811
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|422528562|ref|ZP_16604544.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
gi|314974734|gb|EFT18829.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA1]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|395203114|ref|ZP_10394348.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium humerusii P08]
gi|422441695|ref|ZP_16518504.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA3]
gi|422473020|ref|ZP_16549501.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA2]
gi|422573302|ref|ZP_16648864.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL044PA1]
gi|313835678|gb|EFS73392.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA2]
gi|314928349|gb|EFS92180.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL044PA1]
gi|314970279|gb|EFT14377.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA3]
gi|328908068|gb|EGG27827.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium humerusii P08]
Length = 842
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|50841767|ref|YP_054994.1| Clp family ATP-binding protease [Propionibacterium acnes KPA171202]
gi|289424196|ref|ZP_06425979.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289428978|ref|ZP_06430658.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|295129846|ref|YP_003580509.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|335050407|ref|ZP_08543373.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335054183|ref|ZP_08547003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|342212083|ref|ZP_08704808.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|354606251|ref|ZP_09024222.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365961999|ref|YP_004943565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365964241|ref|YP_004945806.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365973180|ref|YP_004954739.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|386023229|ref|YP_005941532.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|387502650|ref|YP_005943879.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|407934659|ref|YP_006850301.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|417931045|ref|ZP_12574418.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|419420498|ref|ZP_13960727.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|422384263|ref|ZP_16464404.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|422387113|ref|ZP_16467230.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|422391910|ref|ZP_16471984.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|422394956|ref|ZP_16474997.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|422425099|ref|ZP_16502045.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|422427037|ref|ZP_16503955.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|422429131|ref|ZP_16506036.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|422432061|ref|ZP_16508931.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|422434917|ref|ZP_16511775.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|422436826|ref|ZP_16513673.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|422442639|ref|ZP_16519442.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|422446431|ref|ZP_16523176.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|422447675|ref|ZP_16524407.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|422450219|ref|ZP_16526936.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|422453070|ref|ZP_16529766.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|422456626|ref|ZP_16533290.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|422460620|ref|ZP_16537254.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|422474118|ref|ZP_16550588.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|422476581|ref|ZP_16553020.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|422479506|ref|ZP_16555916.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|422481731|ref|ZP_16558130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|422484002|ref|ZP_16560381.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|422487811|ref|ZP_16564142.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|422491570|ref|ZP_16567881.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|422494356|ref|ZP_16570651.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|422497810|ref|ZP_16574083.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|422500239|ref|ZP_16576495.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|422504740|ref|ZP_16580974.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|422509213|ref|ZP_16585371.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|422511361|ref|ZP_16587504.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|422514198|ref|ZP_16590319.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|422515417|ref|ZP_16591529.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|422517986|ref|ZP_16594058.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|422520633|ref|ZP_16596675.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|422523564|ref|ZP_16599576.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|422526127|ref|ZP_16602126.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|422531493|ref|ZP_16607441.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|422535148|ref|ZP_16611071.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|422536019|ref|ZP_16611927.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|422538510|ref|ZP_16614384.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|422541293|ref|ZP_16617151.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|422543842|ref|ZP_16619682.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|422546341|ref|ZP_16622168.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|422550764|ref|ZP_16626561.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|422552944|ref|ZP_16628731.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|422554827|ref|ZP_16630597.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|422557534|ref|ZP_16633277.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|422559213|ref|ZP_16634941.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|422562339|ref|ZP_16638017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|422567557|ref|ZP_16643183.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|422570683|ref|ZP_16646278.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|422578082|ref|ZP_16653611.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|50839369|gb|AAT82036.1| putative Clp-family ATP-binding protease [Propionibacterium acnes
KPA171202]
gi|289154893|gb|EFD03575.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK187]
gi|289157979|gb|EFD06202.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J165]
gi|291377338|gb|ADE01193.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes SK137]
gi|313765265|gb|EFS36629.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA1]
gi|313772820|gb|EFS38786.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL074PA1]
gi|313793158|gb|EFS41225.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA1]
gi|313802753|gb|EFS43971.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA2]
gi|313806411|gb|EFS44918.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA2]
gi|313810960|gb|EFS48674.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA1]
gi|313814541|gb|EFS52255.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA1]
gi|313815263|gb|EFS52977.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA1]
gi|313817439|gb|EFS55153.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA2]
gi|313821974|gb|EFS59688.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA1]
gi|313824130|gb|EFS61844.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA2]
gi|313826497|gb|EFS64211.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA1]
gi|313828678|gb|EFS66392.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL063PA2]
gi|313831726|gb|EFS69440.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL007PA1]
gi|313834393|gb|EFS72107.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL056PA1]
gi|313840416|gb|EFS78130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL086PA1]
gi|314916082|gb|EFS79913.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA4]
gi|314917003|gb|EFS80834.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA1]
gi|314921279|gb|EFS85110.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA3]
gi|314926635|gb|EFS90466.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL036PA3]
gi|314931059|gb|EFS94890.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL067PA1]
gi|314954988|gb|EFS99394.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA1]
gi|314959028|gb|EFT03130.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA1]
gi|314961301|gb|EFT05402.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA2]
gi|314964571|gb|EFT08671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA1]
gi|314969669|gb|EFT13767.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL037PA1]
gi|314977070|gb|EFT21165.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL045PA1]
gi|314980355|gb|EFT24449.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA2]
gi|314985530|gb|EFT29622.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA1]
gi|314987356|gb|EFT31447.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA2]
gi|314989103|gb|EFT33194.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL005PA3]
gi|315078414|gb|EFT50445.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL053PA2]
gi|315082119|gb|EFT54095.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL078PA1]
gi|315086096|gb|EFT58072.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL002PA3]
gi|315087681|gb|EFT59657.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL072PA1]
gi|315097365|gb|EFT69341.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL038PA1]
gi|315099470|gb|EFT71446.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL059PA2]
gi|315102025|gb|EFT74001.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL046PA1]
gi|315106363|gb|EFT78339.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA1]
gi|315110110|gb|EFT82086.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL030PA2]
gi|327331349|gb|EGE73088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA2]
gi|327333335|gb|EGE75055.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL096PA3]
gi|327334854|gb|EGE76565.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL097PA1]
gi|327445648|gb|EGE92302.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL013PA2]
gi|327447270|gb|EGE93924.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA1]
gi|327449698|gb|EGE96352.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL043PA2]
gi|327454548|gb|EGF01203.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA3]
gi|327456619|gb|EGF03274.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL083PA2]
gi|327457104|gb|EGF03759.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL092PA1]
gi|328755603|gb|EGF69219.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL087PA1]
gi|328756683|gb|EGF70299.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL025PA2]
gi|328761872|gb|EGF75382.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL099PA1]
gi|332674685|gb|AEE71501.1| putative ATP-dependent Clp protease ATP-binding subunit
[Propionibacterium acnes 266]
gi|333765299|gb|EGL42653.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 434-HC2]
gi|333769680|gb|EGL46777.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium sp. 409-HC1]
gi|335276695|gb|AEH28600.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes 6609]
gi|340767627|gb|EGR90152.1| Clp amino terminal domain protein [Propionibacterium sp. CC003-HC2]
gi|340769368|gb|EGR91892.1| Clp amino terminal domain protein [Propionibacterium acnes SK182]
gi|353557658|gb|EHC27026.1| ATP-dependent Clp protease ATP-binding subunit [Propionibacterium
sp. 5_U_42AFAA]
gi|365738680|gb|AEW82882.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn31]
gi|365740922|gb|AEW80616.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn17]
gi|365743179|gb|AEW78376.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes TypeIA2 P.acn33]
gi|379978872|gb|EIA12196.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes PRP-38]
gi|407903240|gb|AFU40070.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes C1]
gi|456740409|gb|EMF64930.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes FZ1/2/0]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|422504031|ref|ZP_16580268.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA2]
gi|315082738|gb|EFT54714.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL027PA2]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|282853334|ref|ZP_06262671.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|386070819|ref|YP_005985715.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
gi|422389730|ref|ZP_16469827.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|422458087|ref|ZP_16534745.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|422463757|ref|ZP_16540370.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|422466893|ref|ZP_16543455.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|422566068|ref|ZP_16641707.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|422576859|ref|ZP_16652396.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|282582787|gb|EFB88167.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes J139]
gi|314922364|gb|EFS86195.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL001PA1]
gi|314965312|gb|EFT09411.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL082PA2]
gi|315091112|gb|EFT63088.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL110PA4]
gi|315094198|gb|EFT66174.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL060PA1]
gi|315104854|gb|EFT76830.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL050PA2]
gi|327329257|gb|EGE71017.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL103PA1]
gi|353455185|gb|AER05704.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes ATCC 11828]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|422489253|ref|ZP_16565580.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
gi|328758387|gb|EGF72003.1| negative regulator of genetic competence ClpC/MecB
[Propionibacterium acnes HL020PA1]
Length = 844
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L H GTE +L+G++ EG +AAK L + ++L VR + +I+G G +P
Sbjct: 19 EAKALNHNYIGTEHLLLGLISEGEGVAAKALESLDISLEAVRAQVEEIIGHGT---STPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
H P T A++V++ ++ L+ N + +LLG+ E + ++L LG
Sbjct: 76 GHIPFTPRAKKVLELSLREALQM-NHSYIGTEHILLGLIREGEGVAAQVLIRLG 128
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA ++ H GTE IL+G++ EG +AA+ L G L VR+ ++++
Sbjct: 94 EALQMNHSYIGTEHILLGLIREGEGVAAQVLIRLGADLNTVRNSVLQLL 142
>gi|393198912|ref|YP_006460754.1| chaperone ATPase [Solibacillus silvestris StLB046]
gi|327438243|dbj|BAK14608.1| ATPase with chaperone activity, ATP-binding subunit [Solibacillus
silvestris StLB046]
Length = 814
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD--- 57
+ + EA +LKH GTE IL+G++ EG +AAK L A ++ + ++VGKG
Sbjct: 16 LAQEEAIRLKHKEIGTEHILLGLIREGGGIAAKALEAINISPQMIETGIEELVGKGTEDV 75
Query: 58 --FFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
++P A++VI+ ++D K G++ V +LL + E + ++LA
Sbjct: 76 GPIVHYTPR-------AKKVIELSLDESRKLGHA-YVGTEHILLALIREGEGVAARVLAN 127
Query: 116 LGFSDEKAKE 125
G S KA++
Sbjct: 128 TGVSINKARQ 137
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE IL+ ++ EG +AA+ L GV++ K R + + ++G D
Sbjct: 95 ESRKLGHAYVGTEHILLALIREGEGVAARVLANTGVSINKARQQVLLLLGNND 147
>gi|225570736|ref|ZP_03779759.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
gi|225160198|gb|EEG72817.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
15053]
Length = 812
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGV---TLFKVRDESVKIVGKGDFFFFS 62
AR+L HP GTE +L+G+ T +A + L ANGV + KV DE V VG +
Sbjct: 18 ARELDHPYVGTEHLLLGLRKVYTGVAGQVLAANGVDEENILKVVDELVSPVG-NTTVAHN 76
Query: 63 PEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
PE P Q +++ + L+ S +V +LL + E D +IL LG S +K
Sbjct: 77 PEFSP---RLQYILEESKGEALRF-RSSDVGTEHMLLALLKEVDCVAARILLTLGISLQK 132
>gi|406666957|ref|ZP_11074720.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
gi|405385240|gb|EKB44676.1| Negative regulator of genetic competence ClpC/MecB [Bacillus
isronensis B3W22]
Length = 814
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD--- 57
+ + EA +LKH GTE IL+G++ EG +AAK L A ++ + ++VGKG
Sbjct: 16 LAQEEAIRLKHKEIGTEHILLGLIREGGGIAAKALEAINISPQMIETGIEELVGKGTEDV 75
Query: 58 --FFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
++P A++VI+ ++D K G++ V +LL + E + ++LA
Sbjct: 76 GPIVHYTPR-------AKKVIELSLDESRKLGHA-YVGTEHILLALIREGEGVAARVLAN 127
Query: 116 LGFSDEKAKE 125
G S KA++
Sbjct: 128 TGVSINKARQ 137
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE IL+ ++ EG +AA+ L GV++ K R + + ++G D
Sbjct: 95 ESRKLGHAYVGTEHILLALIREGEGVAARVLANTGVSINKARQQVLLLLGNND 147
>gi|418323135|ref|ZP_12934424.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
gi|365230228|gb|EHM71338.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
pettenkoferi VCU012]
Length = 827
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + G+T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMREPEGIAAKVLESFGITEDKVIEEVEKLIGHGQEQMGALH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTPR---AKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G D
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPD 146
>gi|326203327|ref|ZP_08193192.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986585|gb|EGD47416.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 810
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 9 LKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEHPPL 68
L H GTE IL+G++ EGT +A++ L G+T K+ E +++GKGD P
Sbjct: 23 LGHNYVGTEHILLGLVKEGTGVASRVLLGQGITEEKILKEIEELIGKGDAEGTQP--VGF 80
Query: 69 TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T +RV++ A + G G + LLLGI E +S +I+ LG +K
Sbjct: 81 TPRTKRVLELAFKEARRMGQ-GYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQK 133
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EAR++ GTE +L+GI+ EG S+A + + GV K+ +E +KI+
Sbjct: 94 EARRMGQGYIGTEHLLLGIMKEGESVAVRIMMDLGVDPQKLLNELIKIL 142
>gi|226950963|ref|YP_002806054.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
gi|226843529|gb|ACO86195.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A2 str. Kyoto]
Length = 811
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ + E
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKELLNNFSITEDKVRQLIERYEGKGEMDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ +
Sbjct: 79 -IPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLR 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELVKNLSGQETPKDE 152
>gi|323490586|ref|ZP_08095791.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
gi|323395678|gb|EGA88519.1| Class III stress response-related ATPase, ClpC [Planococcus
donghaensis MPA1U2]
Length = 820
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++KH + GTE IL+G++ EG +AAK L A V + + ++VG G+
Sbjct: 16 LAQEEAIRMKHESIGTEHILLGLIREGGGIAAKALEAIEVNTQLIEEGVKELVGVGEKEV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
H T A++VI+ +VD K G+S + LLL + E + ++L G S
Sbjct: 76 GPIVH--YTPRAKKVIELSVDESRKLGHS-YIGTEHLLLALIREGEGVAARVLGNAGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE +L+ ++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 95 ESRKLGHSYIGTEHLLLALIREGEGVAARVLGNAGVSLNKARQQVLQLLGSNE 147
>gi|170760517|ref|YP_001788851.1| negative regulator of genetic competence MecB/ClpC [Clostridium
botulinum A3 str. Loch Maree]
gi|169407506|gb|ACA55917.1| putative negative regulator of genetic competence MecB/ClpC
[Clostridium botulinum A3 str. Loch Maree]
Length = 811
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA K KH GTE IL+GIL+E +A + L +T KVR + GKG+ S
Sbjct: 20 EAEKFKHGYVGTEHILLGILIE-DGVAKQLLNNFSITEDKVRQLIERYEGKGE-MDLSKN 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
PLT +R+++ ++ + ++ N +T +LLG+ E + IL+ LG E+ K
Sbjct: 78 EIPLTPRTKRLLEMSL-LEARNLNHNYITPEHILLGLIREAEGVAFTILSNLGLDAERLK 136
Query: 125 E--LESLSSEPGSVDD 138
+ +++LS + D+
Sbjct: 137 KELIKNLSGQETPKDE 152
>gi|87309320|ref|ZP_01091456.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
gi|87287959|gb|EAQ79857.1| negative regulator of genetic competence ClpC/MecB [Blastopirellula
marina DSM 3645]
Length = 849
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L V L K+R E K+V G +
Sbjct: 19 EAQRFNHEYIGTEHILLGLIKEGSGVAANVLKTLEVDLRKIRLEVEKLVQSGP-DMVTMG 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
P T A++VI+++++ + ++ N V +LLG+ E + ++L LG E +
Sbjct: 78 KLPQTPRAKKVIEYSME-EARNLNHNYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVR 136
Query: 125 E 125
E
Sbjct: 137 E 137
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L E +AA+ L G+ L VR+E + ++G G
Sbjct: 95 EARNLNHNYVGTEHILLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLGHG 146
>gi|389816088|ref|ZP_10207275.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
gi|388465352|gb|EIM07670.1| Class III stress response-related ATPase, ClpC [Planococcus
antarcticus DSM 14505]
Length = 818
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD--- 57
+ + EA ++KH + GTE IL+G++ EG +AAK L A V + + ++VG G+
Sbjct: 15 LAQEEAIRMKHESIGTEHILLGLIREGGGIAAKALEAIEVNTQLIEEGVKELVGVGEKDV 74
Query: 58 --FFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAA 115
++P A++VI+ +VD K G+S + LLL + E + ++L
Sbjct: 75 GPIVHYTPR-------AKKVIELSVDESRKLGHS-YIGTEHLLLALIREGEGVAARVLGN 126
Query: 116 LGFSDEKAKE 125
G S KA++
Sbjct: 127 AGVSLNKARQ 136
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE +L+ ++ EG +AA+ L GV+L K R + ++++G +
Sbjct: 94 ESRKLGHSYIGTEHLLLALIREGEGVAARVLGNAGVSLNKARQQVLQLLGSNE 146
>gi|291008732|ref|ZP_06566705.1| putative ATP-dependent Clp protease [Saccharopolyspora erythraea
NRRL 2338]
Length = 111
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + GV+ VR + +I+G+GD
Sbjct: 15 LAQEEARTLNHNYIGTEHILLGLVHEGEGVAAKALESLGVSPEGVRRQVEEIIGRGD--Q 72
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNS 89
SP + P T ++V++ ++ L+ GN+
Sbjct: 73 DSPSGNIPFTPRGKKVLELSLREALQLGNT 102
>gi|332295188|ref|YP_004437111.1| ATPase AAA [Thermodesulfobium narugense DSM 14796]
gi|332178291|gb|AEE13980.1| ATPase AAA-2 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 812
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++L H GTE IL+G+L EGT +A K + + + +R E +++G+G
Sbjct: 15 LAQEEAKRLGHNFVGTEHILLGLLAEGTGIANKVINSMDIEPQDIRREVERLIGRGGGTL 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
S P T A+RV++ + + G++ + +LLG+ E + G ++L +
Sbjct: 75 IS--EIPFTPRAKRVLELSWEEARLLGHN-HIGTEHILLGLLREGEGIGARVLKSFNM 129
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EAR L H GTE IL+G+L EG + A+ L + + + KVR + ++I+ G
Sbjct: 94 EARLLGHNHIGTEHILLGLLREGEGIGARVLKSFNMDIGKVRSQIIQIISGG 145
>gi|320095436|ref|ZP_08027113.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977629|gb|EFW09295.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 822
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR LKH GTE +L+G++ EG +AAK L G+ VR ++I+G+G+ P
Sbjct: 19 EARGLKHNYIGTEHLLLGLITEGEGVAAKALETMGIKGDAVRKSVIEIIGEGE----KPV 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNS 89
H P T A+RV + ++ L+ G++
Sbjct: 75 EGHIPFTPRAKRVFELSLREALQLGHN 101
>gi|422012810|ref|ZP_16359452.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
gi|394752669|gb|EJF36341.1| Clp amino terminal domain protein [Actinomyces georgiae F0490]
Length = 822
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR LKH GTE +L+G++ EG +AAK L G+ VR ++I+G+G+ P
Sbjct: 19 EARGLKHNYIGTEHLLLGLITEGEGVAAKALETMGIKGDAVRKSVIEIIGEGE----KPV 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNS 89
H P T A+RV + ++ L+ G++
Sbjct: 75 EGHIPFTPRAKRVFELSLREALQLGHN 101
>gi|309790848|ref|ZP_07685392.1| ATPase [Oscillochloris trichoides DG-6]
gi|308227135|gb|EFO80819.1| ATPase [Oscillochloris trichoides DG6]
Length = 840
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR HP GTE IL+G++ E +AA+ L GV L + R IVG G+ + +
Sbjct: 22 EARSFNHPYIGTEHILLGLIRESEGIAARVLDDLGVKLAQARSAVEFIVGVGEGATVNDQ 81
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
LT AQ+VI +A++ + N + LLLG+ + +L +G S E+ +
Sbjct: 82 E--LTARAQKVIKYAIEEANRL-NHHYIGTEHLLLGLVRNGEGVATGVLDIMGVSLEQVR 138
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG 56
EA +L H GTE +L+G++ G +A L GV+L +VR++ ++++ G
Sbjct: 97 EANRLNHHYIGTEHLLLGLVRNGEGVATGVLDIMGVSLEQVRNQVMRVLRHG 148
>gi|416386179|ref|ZP_11684917.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
gi|357264720|gb|EHJ13568.1| ATP-dependent Clp protease regulatory subunit [Crocosphaera
watsonii WH 0003]
Length = 789
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+++ GTE +L+G+L +G SL+A+ L + G+ L R ++ GKG
Sbjct: 15 LAQEEAQRMGQNLVGTEHLLLGLLSQGNSLSARVLQSMGLNLTSTRQTIERLRGKGA--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
FSP + P T ++ ++ + + + S ++ VT +L+ + S+ ++ K+L + G
Sbjct: 73 FSPSNLPFTPTVKQTLEKSFE--IASKDNSFVTPEYILMVLLSDANTVAVKVLISQGI 128
>gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
gi|67856440|gb|EAM51682.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
[Crocosphaera watsonii WH 8501]
Length = 789
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+++ GTE +L+G+L +G SL+A+ L + G+ L R ++ GKG
Sbjct: 15 LAQEEAQRMGQNLVGTEHLLLGLLSQGNSLSARVLQSMGLNLTSTRQTIERLRGKGA--G 72
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
FSP + P T ++ ++ + + + S ++ VT +L+ + S+ ++ K+L + G
Sbjct: 73 FSPSNLPFTPTVKQTLEKSFE--IASKDNSFVTPEYILMVLLSDANTVAVKVLISQGI 128
>gi|428779009|ref|YP_007170795.1| chaperone ATPase [Dactylococcopsis salina PCC 8305]
gi|428693288|gb|AFZ49438.1| ATPase with chaperone activity, ATP-binding subunit
[Dactylococcopsis salina PCC 8305]
Length = 793
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR++K G+E +L+G++ E +S AAK L GV L R +VG G
Sbjct: 15 LAQEEARRMKQNLVGSEQVLLGLIAEASSDAAKLLNQMGVKLKDARQVVEGLVGSGSGNV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
P + P T A+R+ + A++ + S E + +L + + K+L+ LG
Sbjct: 75 --PSNIPFTPRAKRIFEQALE--IARQRSHESILPEHILLAMTREEGVATKVLSQLGVDP 130
Query: 121 EK-AKELESLSSEPGSVDD 138
++ A LE P S DD
Sbjct: 131 KQVANGLEESLDNPSSGDD 149
>gi|339626578|ref|YP_004718221.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|379006033|ref|YP_005255484.1| ATPase AAA-2 domain-containing protein [Sulfobacillus acidophilus
DSM 10332]
gi|339284367|gb|AEJ38478.1| class III stress response-related ATPase [Sulfobacillus acidophilus
TPY]
gi|361052295|gb|AEW03812.1| ATPase AAA-2 domain protein [Sulfobacillus acidophilus DSM 10332]
Length = 823
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSP- 63
EAR++ H GTE +L+G++ E SL AK L + G+ L VR E +K G+G P
Sbjct: 19 EARRMGHNFVGTEHLLLGLIRESNSLPAKILQSIGLDLETVRSEVLKATGRGP--AIGPN 76
Query: 64 EHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKA 123
E T A++V+ + ++ N + LLLG+ E + ++L A G K
Sbjct: 77 EEVVFTPRAKKVVLELAGEEARALNQNYIGPEHLLLGLIREGEGVAAQVLLAAGADLNKV 136
Query: 124 K 124
+
Sbjct: 137 R 137
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVK 51
EAR L G E +L+G++ EG +AA+ L A G L KVR + ++
Sbjct: 96 EARALNQNYIGPEHLLLGLIREGEGVAAQVLLAAGADLNKVRHQLIQ 142
>gi|332710153|ref|ZP_08430106.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
gi|332351111|gb|EGJ30698.1| ATPase with chaperone activity, ATP-binding subunit [Moorea
producens 3L]
Length = 795
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + E R+L H GTE +L+G++ + T++AA+ L GVTL R VG+G
Sbjct: 15 LAQEETRRLGHSLVGTEQLLLGLIAQRTAVAARVLRDFGVTLEDARYSVENTVGRGSRMV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
S P T A+ V + + G++ + LLL I + +S ++L LG
Sbjct: 75 SS--ELPFTPKAKEVFQQSFQEAKQLGHN-YIDTEHLLLAIIHDKNSVASQVLVNLG 128
>gi|352516241|ref|YP_004885558.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
gi|348600348|dbj|BAK93394.1| ATP-dependent Clp protease ATP-binding subunit ClpC
[Tetragenococcus halophilus NBRC 12172]
Length = 830
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA++ KH T G+E +L+ +L+E +A K L V +R+E + G G
Sbjct: 15 IAQEEAKRFKHQTVGSEHVLLALLIEPNGIAGKTLREMNVNENDIREEIEHLTGYGTMTS 74
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
+ + P + A+++ +A D + G+S +V LLLG+ + + +I+ LG S
Sbjct: 75 YPVSGYLPYSPRARQIFAYAGDEAKRLGSS-QVGTEHLLLGLLRDEEILASRIMLNLGLS 133
Query: 120 DEKAKEL 126
K ++L
Sbjct: 134 LAKMRQL 140
>gi|400975586|ref|ZP_10802817.1| ATP-dependent Clp protease, ATP-binding subunit [Salinibacterium
sp. PAMC 21357]
Length = 825
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDSVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++G
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLLG 143
>gi|148269862|ref|YP_001244322.1| ATPase [Thermotoga petrophila RKU-1]
gi|147735406|gb|ABQ46746.1| ATPase AAA-2 domain protein [Thermotoga petrophila RKU-1]
Length = 820
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+ IL S A + L G + KVR E + +VG G F P
Sbjct: 19 EAKELGHSYVGTEHLLLAILKVDRSPAVELLEEMGASYSKVRSEIISMVGMG-MRGFVP- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P +T A+RV + A + K S ++ LLLGI E + IL LG
Sbjct: 77 SPQMTPRAKRVTELAYEEA-KILGSDKINPEHLLLGILREGEGIAIHILRKLG 128
>gi|297172680|gb|ADI23647.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF4000_15H13]
Length = 826
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ EG +AA L V L +V + + V KG
Sbjct: 15 MAREEAIRLQHDYVGTEHILLGLIREGEGVAAAVLTNLDVDLEQVHERVEESVRKGKATI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V+++A+ + + N V LLLG+ E ++L +LG +
Sbjct: 75 ALGEL-PYTSRAKKVLEFAM-AEARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTL 132
Query: 121 EKAK 124
E+A+
Sbjct: 133 EEAR 136
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR H GTE +L+G+L E +AA+ L + GVTL + R E+VK++G
Sbjct: 95 EARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTLEEARGETVKVLG 144
>gi|88854764|ref|ZP_01129430.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
gi|88815925|gb|EAR25781.1| ATP-dependent Clp protease, ATP-binding subunit [marine
actinobacterium PHSC20C1]
Length = 825
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDSVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++G
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLLG 143
>gi|149918|gb|AAA25352.1| ORFIII, partial [Mycobacterium leprae]
Length = 97
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR L H GTE IL+G++ EG +AAK L + G++L VR + I+G+G
Sbjct: 15 LAQEEARMLNHNYIGTEHILLGLIPEGEGVAAKSLDSLGISLEAVRSQVEDIIGQGQ--- 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLK 85
+P H P T A++V++ ++ L+
Sbjct: 72 QAPSGHIPFTPRAKKVLELSLREALQ 97
>gi|170288547|ref|YP_001738785.1| ATPase [Thermotoga sp. RQ2]
gi|170176050|gb|ACB09102.1| ATPase AAA-2 domain protein [Thermotoga sp. RQ2]
Length = 820
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+ IL S A + L G + KVR E + +VG G F P
Sbjct: 19 EAKELGHSYVGTEHLLLAILKVDRSPAVELLEEMGASYSKVRSEIISMVGMG-MRGFVP- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P +T A+RV + A + K S ++ LLLGI E + IL LG
Sbjct: 77 SPQMTPRAKRVTELAYEEA-KILGSDKINPEHLLLGILREGEGIAIHILRKLG 128
>gi|363897398|ref|ZP_09323937.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
gi|361958895|gb|EHL12192.1| hypothetical protein HMPREF9624_00499 [Oribacterium sp. ACB7]
Length = 818
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSPE 64
A + H GTE IL+G++ EGT++A K L AN ++ K+ + K + G P
Sbjct: 19 AEECHHQYIGTEHILLGLVREGTAVAGKVLKANAISEDKIMEMIAKFISTDGKLSVADP- 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T A+RV++ A+ SG S V LLL I + + +I++ LG S +K
Sbjct: 78 -SGYTPSAKRVLEQAMQESRDSG-SRLVGTEHLLLAILKDGNCVASRIISTLGASTQK 133
>gi|15642971|ref|NP_228013.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima
MSB8]
gi|403252997|ref|ZP_10919302.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga sp. EMP]
gi|418046134|ref|ZP_12684228.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|4980695|gb|AAD35290.1|AE001705_1 ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima
MSB8]
gi|351675687|gb|EHA58847.1| ATPase AAA-2 domain protein [Thermotoga maritima MSB8]
gi|402811759|gb|EJX26243.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga sp. EMP]
Length = 820
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+ IL S A + L G + KVR E + +VG G F P
Sbjct: 19 EAKELGHSYVGTEHLLLAILKVDRSPAVELLEEMGASYSKVRSEIISMVGMG-MRGFVP- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P +T A+RV + A + K S ++ LLLGI E + IL LG
Sbjct: 77 SPQMTPRAKRVTELAYEEA-KILGSDKINPEHLLLGILREGEGIAIHILRKLG 128
>gi|323357510|ref|YP_004223906.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
gi|323273881|dbj|BAJ74026.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
testaceum StLB037]
Length = 841
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|115485055|ref|NP_001067671.1| Os11g0267400 [Oryza sativa Japonica Group]
gi|75269548|sp|Q53LY0.1|CLPC3_ORYSJ RecName: Full=Chaperone protein ClpC3, chloroplastic; AltName:
Full=ATP-dependent Clp protease ATP-binding subunit ClpC
homolog 3; AltName: Full=Casein lytic proteinase C3;
Flags: Precursor
gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|77549794|gb|ABA92591.1| ATP-dependent Clp protease ATP-binding subunit clpA
CD4B,chloroplast precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113644893|dbj|BAF28034.1| Os11g0267400 [Oryza sativa Japonica Group]
Length = 932
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EAR+L H G+E +L+G++ EGT + AK L G++L R E K+ G+G
Sbjct: 112 MAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARAEVEKMAGRGPGMV 171
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSE 104
P T A+ V+ + + + G++ V + LLLG+ E
Sbjct: 172 --PMEIKFTPAAKNVLQASQEEAHQLGHN-YVGSEHLLLGLLRE 212
>gi|410461714|ref|ZP_11315360.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
gi|409925481|gb|EKN62692.1| Class III stress response-related ATPase, ClpC [Bacillus
azotoformans LMG 9581]
Length = 807
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 4/125 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA +L H GTE IL+G++ EG +AAK L A + K+++E ++G+GD
Sbjct: 16 LAQEEAVRLGHSNIGTEHILLGLIREGEGIAAKALLALNLGPEKIQEEVEALIGRGDEAS 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
+ + P A++VI+ ++D K G+S V +LLG+ E + ++L LG S
Sbjct: 76 QTIHYTP---RAKKVIELSMDEARKLGHS-YVGTEHILLGLIREGEGVAARVLNNLGVSL 131
Query: 121 EKAKE 125
KA++
Sbjct: 132 NKARQ 136
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ EG +AA+ L GV+L K R + ++++G
Sbjct: 94 EARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLG 143
>gi|420213021|ref|ZP_14718362.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
gi|394277269|gb|EJE21595.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM001]
Length = 817
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKESEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|381398100|ref|ZP_09923508.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
gi|380774766|gb|EIC08062.1| ATPase AAA-2 domain protein [Microbacterium laevaniformans OR221]
Length = 841
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLGAD 130
Query: 120 DEKAKE 125
K ++
Sbjct: 131 LNKVRQ 136
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L KVR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLL 142
>gi|168701713|ref|ZP_02733990.1| negative regulator of genetic competence ClpC/MecB [Gemmata
obscuriglobus UQM 2246]
Length = 842
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++ H GTE IL+G++ EG+ +AA L + L K+R E KIV G E
Sbjct: 19 EAQRFNHEYIGTEHILLGLVKEGSGVAANVLKNLDIDLRKIRLEVEKIVQHGP----GGE 74
Query: 65 HP-----PLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS 119
P T A++VI+++++ + ++ N V LLLG+ E + ++L LG
Sbjct: 75 QVVMGRLPHTPRAKKVIEYSIE-EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLGLK 133
Query: 120 DEKAKE 125
E +E
Sbjct: 134 LEDVRE 139
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EAR L H GTE +L+G+L E +AA+ L G+ L VR+E + ++G
Sbjct: 97 EARNLNHNYVGTEHLLLGLLREQEGVAAQVLMNLGLKLEDVREEVLNLLG 146
>gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa Japonica Group]
gi|125576822|gb|EAZ18044.1| hypothetical protein OsJ_33590 [Oryza sativa Japonica Group]
Length = 959
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EAR+L H G+E +L+G++ EGT + AK L G++L R E K+ G+G
Sbjct: 112 MAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARAEVEKMAGRGPGMV 171
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSE 104
P T A+ V+ + + + G++ V + LLLG+ E
Sbjct: 172 --PMEIKFTPAAKNVLQASQEEAHQLGHN-YVGSEHLLLGLLRE 212
>gi|125534026|gb|EAY80574.1| hypothetical protein OsI_35755 [Oryza sativa Indica Group]
Length = 959
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M + EAR+L H G+E +L+G++ EGT + AK L G++L R E K+ G+G
Sbjct: 112 MAQEEARRLGHHAAGSEQLLLGVIGEGTGIGAKVLRGAGLSLKAARAEVEKMAGRGPGMV 171
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSE 104
P T A+ V+ + + + G++ V + LLLG+ E
Sbjct: 172 --PMEIKFTPAAKNVLQASQEEAHQLGHN-YVGSEHLLLGLLRE 212
>gi|399525068|ref|ZP_10765545.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
gi|398373543|gb|EJN51465.1| Clp amino terminal domain protein [Atopobium sp. ICM58]
Length = 822
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR LKH GTE +L+G++ EG +AAK L G+ VR ++I+G+G+ P
Sbjct: 19 EARGLKHNYIGTEHLLLGLISEGEGVAAKALETMGIKGEAVRASVIEIIGEGE----KPV 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNS 89
H P T A+RV + ++ L+ G++
Sbjct: 75 EGHIPFTPRAKRVFELSLREALQLGHN 101
>gi|396583892|ref|ZP_10484401.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
gi|395548567|gb|EJG15807.1| Clp amino terminal domain protein [Actinomyces sp. ICM47]
Length = 822
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR LKH GTE +L+G++ EG +AAK L G+ VR ++I+G+G+ P
Sbjct: 19 EARGLKHNYIGTEHLLLGLISEGEGVAAKALETMGIKGEAVRASVIEIIGEGE----KPV 74
Query: 65 --HPPLTEDAQRVIDWAVDHKLKSGNS 89
H P T A+RV + ++ L+ G++
Sbjct: 75 EGHIPFTPRAKRVFELSLREALQLGHN 101
>gi|390934090|ref|YP_006391595.1| ATPase [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569591|gb|AFK85996.1| ATPase AAA-2 domain protein [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 810
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----GDFFF 60
EAR L H GTE IL+G++ E +A++ L + GVT +R + ++G GD
Sbjct: 21 EARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDIRSKVESLIGMGNVPGDVVG 80
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
++P A+RV++ + + + N+ + +LLG+ E + +IL LG
Sbjct: 81 YTPR-------AKRVLELSF-AEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDF 132
Query: 121 EKAKE--LESLSSEP 133
+ +E ++ +S EP
Sbjct: 133 NRVREEIVKMVSEEP 147
>gi|257432644|ref|ZP_05609004.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
gi|257282059|gb|EEV12194.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
Length = 818
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGVMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|121535702|ref|ZP_01667506.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
gi|121305733|gb|EAX46671.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
Length = 814
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ EG +AA+ L + ++L VR + ++G+G+ E
Sbjct: 19 EAMRLGHNYIGTEHLLLGLIHEGEGVAARALASLNISLQTVRAQVEAMIGRGE---GPQE 75
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A+RV++ AV G++ + +LLG+ E + ++L++LG
Sbjct: 76 QIGYTPRAKRVLELAVQEAAALGHN-YIGTEHILLGLIREGEGVAAQVLSSLG 127
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EA L H GTE IL+G++ EG +AA+ L + G + VR ++++G
Sbjct: 93 EAAALGHNYIGTEHILLGLIREGEGVAAQVLSSLGANINVVRQRVIELLG 142
>gi|255527257|ref|ZP_05394138.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296187235|ref|ZP_06855631.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
gi|255509042|gb|EET85401.1| ATPase AAA-2 domain protein [Clostridium carboxidivorans P7]
gi|296048106|gb|EFG87544.1| negative regulator of genetic competence ClpC/MecB [Clostridium
carboxidivorans P7]
Length = 812
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ L+H GTE IL+GIL E +A + L +T+ VRD + GKGD + E
Sbjct: 20 EAQVLQHGYVGTEHILLGILKE-QGIAKQLLNDINITVDDVRDLVEEYEGKGDIDLYKNE 78
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFS-DEKA 123
PLT +R+++ ++ + ++ N ++ +LL + E + IL LG D+
Sbjct: 79 -IPLTPRTKRLLELSL-FEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFDKLR 136
Query: 124 KEL-ESLSSE 132
KEL E+LS E
Sbjct: 137 KELTEALSGE 146
>gi|188584788|ref|YP_001916333.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349475|gb|ACB83745.1| ATPase AAA-2 domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 814
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG-----KGDFF 59
EAR++ H GTE +L+G++ EG +AAK L GV L K R+E +KI+G KG
Sbjct: 94 EARRMGHNYIGTEHLLLGLVKEGEGIAAKVLQELGVDLDKAREEVLKIIGGSQQPKGQAN 153
Query: 60 FFSPEHPPL 68
F ++P +
Sbjct: 154 FGQAQNPKM 162
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA++L H GTE +L+G++ EG +AA+ GV L +VR+ +V G+
Sbjct: 19 EAKRLNHNYIGTEHLLLGLIREGEGIAAQTFKNLGVDLEEVREAVENLVQPGEEQVSG-- 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ T + VI+ +++ + G++ + LLLG+ E + K+L LG +KA+
Sbjct: 77 NVGYTPRVKTVIELSMEEARRMGHNY-IGTEHLLLGLVKEGEGIAAKVLQELGVDLDKAR 135
Query: 125 E 125
E
Sbjct: 136 E 136
>gi|150019935|ref|YP_001305289.1| ATPase [Thermosipho melanesiensis BI429]
gi|149792456|gb|ABR29904.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429]
Length = 818
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKG-DFFFFSP 63
EA++L H GTE +L+ IL K L G+T KV++E + +VG G F SP
Sbjct: 19 EAKELGHSYVGTEHLLLAILKLNDKNLRKMLEGYGLTYSKVKNEVISVVGMGMRGFIMSP 78
Query: 64 EHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGF 118
+ P A+RV + A + KS ++ LLLGI E + IL +G
Sbjct: 79 QMTP---RAKRVTEIAYEEA-KSMGDEKIKPIHLLLGILREGEGIAVHILRKIGI 129
>gi|257424638|ref|ZP_05601065.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427306|ref|ZP_05603705.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429942|ref|ZP_05606326.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257435548|ref|ZP_05611596.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282913357|ref|ZP_06321146.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|282923274|ref|ZP_06330954.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|293500403|ref|ZP_06666254.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|293509348|ref|ZP_06668059.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
gi|293523935|ref|ZP_06670622.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|257272208|gb|EEV04331.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275499|gb|EEV06972.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279139|gb|EEV09740.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257284739|gb|EEV14858.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
subsp. aureus M876]
gi|282314142|gb|EFB44532.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C101]
gi|282322389|gb|EFB52711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M899]
gi|290920898|gb|EFD97959.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus M1015]
gi|291095408|gb|EFE25669.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus 58-424]
gi|291467445|gb|EFF09960.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus M809]
Length = 818
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGVMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|291542191|emb|CBL15301.1| ATPases with chaperone activity, ATP-binding subunit [Ruminococcus
bromii L2-63]
Length = 821
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A +++H GTE IL G++ EG+ +AA L GVT +R++ I G +P+
Sbjct: 22 AEEMRHNYVGTEHILYGLVKEGSGVAATALNECGVTEDALREKLESINGTMSLVELTPDD 81
Query: 66 PPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T +RV+ AV K+G + V LLL I SE+DS L LG S E+
Sbjct: 82 --FTPRTKRVLRAAVIISSKTGYT-YVGTEHLLLAILSESDSYAVAFLEELGVSVER 135
>gi|325283323|ref|YP_004255864.1| ATPase AAA-2 domain protein [Deinococcus proteolyticus MRP]
gi|324315132|gb|ADY26247.1| ATPase AAA-2 domain protein [Deinococcus proteolyticus MRP]
Length = 752
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
E +L H G E +L+G++ EG S A L GVTL +R+ +I+G+G+ + +
Sbjct: 20 EGNRLGHAMVGPEHLLLGLMREGGS-AYTVLSEFGVTLESLRERVEEIIGRGEGSRLN-D 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASD-LLLGIWSETDSPGHKIL 113
P +T A+RV++ A G VT+++ LLLGI E D ++IL
Sbjct: 78 APAITPRARRVMELATAE--ARGLGAAVTSTEHLLLGILREGDGVAYRIL 125
>gi|315320555|ref|YP_004072612.1| chaperonin ClpC [Thalassiosira oceanica CCMP1005]
gi|315320594|ref|YP_004072651.1| chaperonin ClpC [Thalassiosira oceanica CCMP1005]
gi|283569028|gb|ADB27565.1| chaperonin ClpC [Thalassiosira oceanica CCMP1005]
gi|283569067|gb|ADB27604.1| chaperonin ClpC [Thalassiosira oceanica CCMP1005]
Length = 932
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+G+ EAR++ H GTE +L+G + + +A + L +TL K R E K +G+G +
Sbjct: 15 LGQEEARRMGHNFVGTEQLLLGSIGQRHGIAGRALAQLNITLKKTRKEVEKYIGRGKGYV 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
S P T A+RV++ ++ H+ + V +LL I +E + + L L +
Sbjct: 75 AS--EIPFTPRAKRVLEMSI-HEGQDLGVNYVGTEHILLSILTEGEGIAIRTLDVLRVNI 131
Query: 121 EKAKEL 126
K + L
Sbjct: 132 PKLRHL 137
>gi|417902906|ref|ZP_12546767.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
gi|341850525|gb|EGS91643.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21269]
Length = 818
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVSTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|417643008|ref|ZP_12293079.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
warneri VCU121]
gi|445060498|ref|YP_007385902.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
gi|330686262|gb|EGG97874.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU121]
gi|443426555|gb|AGC91458.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus warneri SG1]
Length = 817
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQAPMATLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|239636922|ref|ZP_04677920.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
gi|239597470|gb|EEQ79969.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
warneri L37603]
Length = 817
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQAPMATLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|254426097|ref|ZP_05039814.1| MerR, DNA binding family [Synechococcus sp. PCC 7335]
gi|196188520|gb|EDX83485.1| MerR, DNA binding family [Synechococcus sp. PCC 7335]
Length = 401
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG------ 54
+GE+ R++ GTE L+GIL EG S+AA+ L + GV+ +V +K +G
Sbjct: 258 LGEIPIREINFDILGTECALLGILAEGKSIAARALTSVGVSYERVHPIVIKWLGTRPAPP 317
Query: 55 KGDFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGI---WSETDSPG 109
+G F P P +RVI+ A+D K ++ LLL I + E +PG
Sbjct: 318 EGTF----PPTLPFAPRMKRVIELALDEA-KQQEKSQIAPEHLLLAILEEYKEAPAPG 370
>gi|296276956|ref|ZP_06859463.1| endopeptidase [Staphylococcus aureus subsp. aureus MR1]
Length = 258
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|148272036|ref|YP_001221597.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829966|emb|CAN00893.1| ATP-dependent protease, ATPase subunit [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 836
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|379794996|ref|YP_005324994.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356871986|emb|CCE58325.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVVEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|50952128|gb|AAT89829.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 839
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|242372741|ref|ZP_04818315.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
gi|242349514|gb|EES41115.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|333896156|ref|YP_004470030.1| ATPase AAA [Thermoanaerobacterium xylanolyticum LX-11]
gi|333111421|gb|AEF16358.1| ATPase AAA-2 domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 810
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK----GDFFF 60
EAR L H GTE IL+G++ E +A++ L + GVT +R + ++G GD
Sbjct: 21 EARSLYHNYVGTEHILLGLIKEEDGIASRVLKSLGVTYEDIRAKVESLIGMGNVPGDVVG 80
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
++P A+RV++ + + + N+ + +LLG+ E + +IL LG
Sbjct: 81 YTPR-------AKRVLELSF-AEARRFNTNYIGTEHILLGLIREGEGVAVRILMELGVDF 132
Query: 121 EKAKE--LESLSSEP 133
+ +E ++ +S EP
Sbjct: 133 NRVREEIVKMVSEEP 147
>gi|170780568|ref|YP_001708900.1| Clp family ATP-binding protease [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155136|emb|CAQ00236.1| putative Clp-family ATP-binding protease [Clavibacter michiganensis
subsp. sepedonicus]
Length = 836
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA+ L H GTE IL+G++ EG +AAK L + G++L VR++ +
Sbjct: 15 LAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQ---VQDIIGQGQ 71
Query: 61 FSPE-HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
P H P T A++V++ ++ L+ G++ + +LLG+ E + ++L LG
Sbjct: 72 QQPTGHIPFTPRAKKVLELSLREALQLGHN-YIGTEHILLGLIREGEGVAAQVLVKLG 128
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
EA +L H GTE IL+G++ EG +AA+ L G L +VR + ++++
Sbjct: 94 EALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLL 142
>gi|314932748|ref|ZP_07840117.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
gi|313654429|gb|EFS18182.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
caprae C87]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTPR---AKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|223042918|ref|ZP_03612966.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
gi|222443772|gb|EEE49869.1| ATPase family associated with various cellular activities (AAA)
protein [Staphylococcus capitis SK14]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTPR---AKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|448744005|ref|ZP_21725910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
gi|445562744|gb|ELY18910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus KT/Y21]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|418871544|ref|ZP_13425920.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|418949170|ref|ZP_13501429.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
gi|375368097|gb|EHS72024.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-125]
gi|375369614|gb|EHS73487.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-157]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|283769680|ref|ZP_06342572.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
gi|283459827|gb|EFC06917.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus H19]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|418578415|ref|ZP_13142510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|418902788|ref|ZP_13456829.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
gi|377696442|gb|EHT20797.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1114]
gi|377741803|gb|EHT65788.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1770]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|253315634|ref|ZP_04838847.1| endopeptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|82750232|ref|YP_415973.1| endopeptidase [Staphylococcus aureus RF122]
gi|282915846|ref|ZP_06323611.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
gi|122063322|sp|Q2YSD6.1|CLPC_STAAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|82655763|emb|CAI80163.1| endopeptidase [Staphylococcus aureus RF122]
gi|282320142|gb|EFB50487.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus D139]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|403385695|ref|ZP_10927752.1| negative regulator of genetic competence clpC/mecB [Kurthia sp.
JC30]
Length = 820
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EA ++KH GTE IL+G++ EG +AAK L A VT + + K+VG G
Sbjct: 16 LAQEEAIRMKHDAIGTEHILLGLIREGGGIAAKALEAIEVTPEVIEEGIEKLVGVGTKDV 75
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
H T A++VI+ +VD K G++ + +LL + E + ++L G S
Sbjct: 76 GPVVH--YTPRAKKVIELSVDESRKLGHT-YIGTEHILLALIREGEGVAARVLNNAGVSL 132
Query: 121 EKAKE 125
KA++
Sbjct: 133 NKARQ 137
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
E+RKL H GTE IL+ ++ EG +AA+ L GV+L K R + ++++G D
Sbjct: 95 ESRKLGHTYIGTEHILLALIREGEGVAARVLNNAGVSLNKARQQVLQLLGNHD 147
>gi|418954707|ref|ZP_13506663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
gi|375372472|gb|EHS76212.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-189]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|297172541|gb|ADI23511.1| hypothetical protein [uncultured Gemmatimonadales bacterium
HF0770_41L09]
Length = 827
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
M EA +L+H GTE IL+G++ EG +A+ L V L ++ + + V KG
Sbjct: 15 MAREEAIRLQHDYVGTEHILLGLIREGDGVASAVLITLTVDLEQIHERVEESVRKGKATI 74
Query: 61 FSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSD 120
E P T A++V+++A+ + + N V LLLG+ E ++L +LG +
Sbjct: 75 ALGEL-PYTSRAKKVLEFAMS-EARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTL 132
Query: 121 EKAK 124
E+A+
Sbjct: 133 EEAR 136
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGD 57
EAR H GTE +L+G+L E +AA+ L + GVTL + R E++K++G D
Sbjct: 95 EARDFNHSYVGTEHLLLGLLREEKGIAAQVLNSLGVTLEEARGETLKVLGSSD 147
>gi|418950315|ref|ZP_13502500.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
gi|375377281|gb|EHS80761.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-160]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|418282574|ref|ZP_12895339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
gi|365169575|gb|EHM60821.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21202]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|418286169|ref|ZP_12898820.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|418924752|ref|ZP_13478655.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
gi|365167723|gb|EHM59100.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21209]
gi|377746047|gb|EHT70018.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG2018]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|384546805|ref|YP_005736058.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|416840758|ref|ZP_11903945.1| endopeptidase [Staphylococcus aureus O11]
gi|416846026|ref|ZP_11906369.1| endopeptidase [Staphylococcus aureus O46]
gi|298693856|gb|ADI97078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus ED133]
gi|323439794|gb|EGA97511.1| endopeptidase [Staphylococcus aureus O11]
gi|323443104|gb|EGB00724.1| endopeptidase [Staphylococcus aureus O46]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|15923515|ref|NP_371049.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926202|ref|NP_373735.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|49482754|ref|YP_039978.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49485389|ref|YP_042610.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|87161024|ref|YP_493213.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194286|ref|YP_499078.1| endopeptidase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148266984|ref|YP_001245927.1| ATPase [Staphylococcus aureus subsp. aureus JH9]
gi|150393031|ref|YP_001315706.1| ATPase [Staphylococcus aureus subsp. aureus JH1]
gi|151220699|ref|YP_001331521.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156978853|ref|YP_001441112.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508764|ref|YP_001574423.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141039|ref|ZP_03565532.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253731128|ref|ZP_04865293.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732532|ref|ZP_04866697.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005318|ref|ZP_05143919.2| endopeptidase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795377|ref|ZP_05644356.1| endopeptidase [Staphylococcus aureus A9781]
gi|258408936|ref|ZP_05681217.1| endopeptidase [Staphylococcus aureus A9763]
gi|258420427|ref|ZP_05683370.1| endopeptidase [Staphylococcus aureus A9719]
gi|258439347|ref|ZP_05690279.1| endopeptidase [Staphylococcus aureus A9299]
gi|258444087|ref|ZP_05692424.1| endopeptidase [Staphylococcus aureus A8115]
gi|258446355|ref|ZP_05694513.1| endopeptidase [Staphylococcus aureus A6300]
gi|258448448|ref|ZP_05696563.1| endopeptidase [Staphylococcus aureus A6224]
gi|258452743|ref|ZP_05700741.1| endopeptidase [Staphylococcus aureus A5948]
gi|258453804|ref|ZP_05701778.1| endopeptidase [Staphylococcus aureus A5937]
gi|269202147|ref|YP_003281416.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|282894957|ref|ZP_06303180.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|282903112|ref|ZP_06311003.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282904902|ref|ZP_06312760.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282907852|ref|ZP_06315687.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910165|ref|ZP_06317969.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282918312|ref|ZP_06326049.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282928860|ref|ZP_06336451.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|283957322|ref|ZP_06374775.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|284023534|ref|ZP_06377932.1| ClpA-related protein [Staphylococcus aureus subsp. aureus 132]
gi|294850300|ref|ZP_06791034.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|295406901|ref|ZP_06816704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295427062|ref|ZP_06819698.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|297208762|ref|ZP_06925190.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297246275|ref|ZP_06930124.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297590586|ref|ZP_06949225.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|304381877|ref|ZP_07364524.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379013806|ref|YP_005290042.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|379020295|ref|YP_005296957.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|384549389|ref|YP_005738641.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|384861187|ref|YP_005743907.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384863853|ref|YP_005749212.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|384868552|ref|YP_005748748.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869110|ref|YP_005751824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|385780790|ref|YP_005756961.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|386728282|ref|YP_006194665.1| hemolysin [Staphylococcus aureus subsp. aureus 71193]
gi|386830168|ref|YP_006236822.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387142214|ref|YP_005730607.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|387149685|ref|YP_005741249.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|387601879|ref|YP_005733400.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|387779664|ref|YP_005754462.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|404477910|ref|YP_006709340.1| stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|415684080|ref|ZP_11449235.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688911|ref|ZP_11452426.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693998|ref|ZP_11455603.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|417648357|ref|ZP_12298183.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|417650784|ref|ZP_12300549.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|417654130|ref|ZP_12303857.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|417796780|ref|ZP_12443984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|417798480|ref|ZP_12445646.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|417801347|ref|ZP_12448440.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|417889316|ref|ZP_12533407.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|417893562|ref|ZP_12537588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|417895979|ref|ZP_12539955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|417899762|ref|ZP_12543663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|417902183|ref|ZP_12546052.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|418279368|ref|ZP_12892731.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|418310656|ref|ZP_12922192.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|418312992|ref|ZP_12924490.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|418315148|ref|ZP_12926612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|418318082|ref|ZP_12929496.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|418320331|ref|ZP_12931692.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|418423697|ref|ZP_12996844.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426641|ref|ZP_12999667.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429567|ref|ZP_13002498.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432462|ref|ZP_13005262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436176|ref|ZP_13007993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439075|ref|ZP_13010796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442055|ref|ZP_13013672.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445183|ref|ZP_13016674.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448123|ref|ZP_13019528.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|418450947|ref|ZP_13022289.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|418453964|ref|ZP_13025237.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418456868|ref|ZP_13028083.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561558|ref|ZP_13126046.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|418566028|ref|ZP_13130417.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|418566752|ref|ZP_13131120.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|418570503|ref|ZP_13134771.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|418573446|ref|ZP_13137640.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|418581200|ref|ZP_13145283.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418595404|ref|ZP_13159018.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|418599346|ref|ZP_13162835.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|418601623|ref|ZP_13165043.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|418639547|ref|ZP_13201792.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|418642050|ref|ZP_13204251.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|418643846|ref|ZP_13206001.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|418646212|ref|ZP_13208323.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|418651241|ref|ZP_13213249.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|418654853|ref|ZP_13216746.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|418656945|ref|ZP_13218729.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|418658745|ref|ZP_13220454.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|418662543|ref|ZP_13224087.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|418874542|ref|ZP_13428808.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|418877374|ref|ZP_13431613.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|418880231|ref|ZP_13434451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|418883158|ref|ZP_13437358.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|418885818|ref|ZP_13439968.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|418891128|ref|ZP_13445245.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418893984|ref|ZP_13448085.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|418896910|ref|ZP_13450983.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|418899874|ref|ZP_13453933.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418905107|ref|ZP_13459136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|418908279|ref|ZP_13462287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|418913715|ref|ZP_13467688.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|418916334|ref|ZP_13470297.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418919339|ref|ZP_13473285.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|418922157|ref|ZP_13476074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418930554|ref|ZP_13484402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|418933455|ref|ZP_13487279.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|418980365|ref|ZP_13528148.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|418981392|ref|ZP_13529107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418985025|ref|ZP_13532715.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|418990419|ref|ZP_13538080.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|419774829|ref|ZP_14300783.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|419785934|ref|ZP_14311678.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|421149287|ref|ZP_15608945.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422744661|ref|ZP_16798616.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|422745104|ref|ZP_16799050.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|424775944|ref|ZP_18202931.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|424784378|ref|ZP_18211188.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|440707559|ref|ZP_20888254.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|440733999|ref|ZP_20913612.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637217|ref|ZP_21121302.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443638292|ref|ZP_21122339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|448741467|ref|ZP_21723431.1| endopeptidase [Staphylococcus aureus KT/314250]
gi|81649908|sp|Q6GBW3.1|CLPC_STAAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81651703|sp|Q6GJE4.1|CLPC_STAAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81706177|sp|Q7A797.1|CLPC_STAAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81782085|sp|Q99W78.1|CLPC_STAAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063320|sp|Q2FJB5.1|CLPC_STAA3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063321|sp|Q2G0P5.1|CLPC_STAA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|122063323|sp|P0C281.1|CLPC_STAAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|13700415|dbj|BAB41713.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
gi|14246293|dbj|BAB56687.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
gi|49240883|emb|CAG39550.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243832|emb|CAG42257.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|87126998|gb|ABD21512.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87201844|gb|ABD29654.1| endopeptidase, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740053|gb|ABQ48351.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH9]
gi|149945483|gb|ABR51419.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
JH1]
gi|150373499|dbj|BAF66759.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156720988|dbj|BAF77405.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367573|gb|ABX28544.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725142|gb|EES93871.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729461|gb|EES98190.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789349|gb|EEV27689.1| endopeptidase [Staphylococcus aureus A9781]
gi|257840287|gb|EEV64750.1| endopeptidase [Staphylococcus aureus A9763]
gi|257843617|gb|EEV68023.1| endopeptidase [Staphylococcus aureus A9719]
gi|257847684|gb|EEV71683.1| endopeptidase [Staphylococcus aureus A9299]
gi|257850757|gb|EEV74702.1| endopeptidase [Staphylococcus aureus A8115]
gi|257854949|gb|EEV77894.1| endopeptidase [Staphylococcus aureus A6300]
gi|257858317|gb|EEV81204.1| endopeptidase [Staphylococcus aureus A6224]
gi|257859616|gb|EEV82466.1| endopeptidase [Staphylococcus aureus A5948]
gi|257864060|gb|EEV86814.1| endopeptidase [Staphylococcus aureus A5937]
gi|262074437|gb|ACY10410.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
gi|269940097|emb|CBI48473.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus TW20]
gi|282317446|gb|EFB47818.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus subsp. aureus C427]
gi|282325557|gb|EFB55865.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328236|gb|EFB58514.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331727|gb|EFB61238.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282589468|gb|EFB94557.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A10102]
gi|282596067|gb|EFC01028.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus C160]
gi|282762639|gb|EFC02776.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A8117]
gi|283469817|emb|CAQ49028.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
aureus subsp. aureus ST398]
gi|283790773|gb|EFC29588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus A017934/97]
gi|285816224|gb|ADC36711.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus aureus 04-02981]
gi|294822812|gb|EFG39247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A9754]
gi|294968132|gb|EFG44158.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8819]
gi|295128850|gb|EFG58480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus EMRSA16]
gi|296886707|gb|EFH25612.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297176873|gb|EFH36131.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus A8796]
gi|297576885|gb|EFH95600.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
gi|302332238|gb|ADL22431.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750416|gb|ADL64593.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339663|gb|EFM05610.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312439057|gb|ADQ78128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829020|emb|CBX33862.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315128816|gb|EFT84815.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193888|gb|EFU24282.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196665|gb|EFU27012.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141611|gb|EFW33450.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320141761|gb|EFW33589.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313245|gb|AEB87658.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus T0131]
gi|329727906|gb|EGG64355.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21172]
gi|329731020|gb|EGG67393.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21189]
gi|329731944|gb|EGG68300.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21193]
gi|334268166|gb|EGL86611.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21305]
gi|334275810|gb|EGL94085.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21310]
gi|334276873|gb|EGL95116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21318]
gi|341841185|gb|EGS82648.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21235]
gi|341843778|gb|EGS84999.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21266]
gi|341844370|gb|EGS85587.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21259]
gi|341851726|gb|EGS92637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21195]
gi|341854333|gb|EGS95204.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21201]
gi|344176766|emb|CCC87228.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus LGA251]
gi|359829604|gb|AEV77582.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus aureus subsp. aureus M013]
gi|364521779|gb|AEW64529.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus 11819-97]
gi|365170702|gb|EHM61663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21178]
gi|365227517|gb|EHM68711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus VCU006]
gi|365236360|gb|EHM77256.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21331]
gi|365236933|gb|EHM77809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21334]
gi|365243778|gb|EHM84446.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21340]
gi|365244323|gb|EHM84984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21232]
gi|371971902|gb|EHO89294.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21264]
gi|371977415|gb|EHO94686.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21262]
gi|371981811|gb|EHO98973.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21333]
gi|371983497|gb|EHP00639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21272]
gi|371984012|gb|EHP01140.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21283]
gi|374362503|gb|AEZ36608.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
gi|374397453|gb|EHQ68663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21343]
gi|374398042|gb|EHQ69240.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21345]
gi|374401543|gb|EHQ72609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21342]
gi|375014250|gb|EHS07942.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-99]
gi|375017187|gb|EHS10809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-3]
gi|375017827|gb|EHS11430.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-24]
gi|375026147|gb|EHS19533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-91]
gi|375027272|gb|EHS20637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-55]
gi|375031945|gb|EHS25205.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-105]
gi|375033412|gb|EHS26605.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-88]
gi|375036042|gb|EHS29129.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-122]
gi|375037645|gb|EHS30664.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-111]
gi|377696082|gb|EHT20438.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1165]
gi|377698332|gb|EHT22680.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1057]
gi|377704956|gb|EHT29264.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377707212|gb|EHT31505.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377708157|gb|EHT32448.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377711984|gb|EHT36207.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377716271|gb|EHT40454.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1769]
gi|377716421|gb|EHT40603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1750]
gi|377722541|gb|EHT46666.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1096]
gi|377727116|gb|EHT51223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1150]
gi|377732085|gb|EHT56136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377732669|gb|EHT56719.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1213]
gi|377735480|gb|EHT59510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377751686|gb|EHT75614.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377755618|gb|EHT79516.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG149]
gi|377758321|gb|EHT82206.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC340D]
gi|377761689|gb|EHT85558.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377766647|gb|EHT90480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC345D]
gi|377767304|gb|EHT91102.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC348]
gi|377771235|gb|EHT94989.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC128]
gi|377771882|gb|EHT95635.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIGC93]
gi|379991893|gb|EIA13355.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus DR10]
gi|383361743|gb|EID39109.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-M]
gi|383971330|gb|EID87408.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus CO-23]
gi|384229575|gb|AFH68822.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
aureus subsp. aureus 71193]
gi|385195560|emb|CCG15169.1| putative stress response-related Clp ATPase [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|387720914|gb|EIK08805.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721079|gb|EIK08966.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722489|gb|EIK10287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727528|gb|EIK15041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729536|gb|EIK16971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731576|gb|EIK18858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS6]
gi|387738379|gb|EIK25422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS8]
gi|387739630|gb|EIK26626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739792|gb|EIK26775.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746895|gb|EIK33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS10]
gi|387748305|gb|EIK34994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387749110|gb|EIK35754.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330204|gb|EJE56296.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|402346723|gb|EJU81800.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
gi|404439399|gb|AFR72592.1| putative stress response-related Clp ATPase [Staphylococcus aureus
08BA02176]
gi|408422956|emb|CCJ10367.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408424944|emb|CCJ12331.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408426933|emb|CCJ14296.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408428921|emb|CCJ26086.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
aureus ST228]
gi|408430909|emb|CCJ18224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408432903|emb|CCJ20188.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408434892|emb|CCJ22152.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|408436877|emb|CCJ24120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus ST228]
gi|421956977|gb|EKU09301.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
gi|436431894|gb|ELP29246.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505881|gb|ELP41740.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21282]
gi|443406095|gb|ELS64680.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21236]
gi|443409729|gb|ELS68221.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21196]
gi|445547768|gb|ELY16030.1| endopeptidase [Staphylococcus aureus KT/314250]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57866102|ref|YP_187761.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242241856|ref|ZP_04796301.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|293367900|ref|ZP_06614538.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417658249|ref|ZP_12307885.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|417910375|ref|ZP_12554097.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|418604270|ref|ZP_13167628.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|418606457|ref|ZP_13169734.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|418609533|ref|ZP_13172675.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|418611880|ref|ZP_13174943.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|418626332|ref|ZP_13188945.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|420166780|ref|ZP_14673460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|420175670|ref|ZP_14682104.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|420193494|ref|ZP_14699346.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|420196769|ref|ZP_14702508.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|420218753|ref|ZP_14723807.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|420222653|ref|ZP_14727570.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|420225510|ref|ZP_14730340.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|420226413|ref|ZP_14731197.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|420228732|ref|ZP_14733449.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|420231100|ref|ZP_14735755.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
gi|81675398|sp|Q5HRM8.1|CLPC_STAEQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|81843102|sp|Q8CQ88.1|CLPC_STAES RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|27314747|gb|AAO03884.1|AE016744_287 endopeptidase [Staphylococcus epidermidis ATCC 12228]
gi|57636760|gb|AAW53548.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis RP62A]
gi|242234634|gb|EES36946.1| ClpB ATPase [Staphylococcus epidermidis W23144]
gi|291317929|gb|EFE58337.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329738043|gb|EGG74264.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU045]
gi|341650550|gb|EGS74370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU037]
gi|374405287|gb|EHQ76229.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU041]
gi|374406860|gb|EHQ77735.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU065]
gi|374407864|gb|EHQ78709.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU057]
gi|374821395|gb|EHR85458.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU117]
gi|374832889|gb|EHR96592.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU126]
gi|394232700|gb|EJD78313.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM088]
gi|394242848|gb|EJD88226.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM061]
gi|394259936|gb|EJE04764.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM023]
gi|394267271|gb|EJE11872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM020]
gi|394288915|gb|EJE32813.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH08001]
gi|394291827|gb|EJE35612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04008]
gi|394293577|gb|EJE37291.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH06004]
gi|394298789|gb|EJE42351.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05003]
gi|394300195|gb|EJE43711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH04003]
gi|394303175|gb|EJE46603.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051668]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLVSFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|21282209|ref|NP_645297.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300912852|ref|ZP_07130294.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|418987425|ref|ZP_13535098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
gi|81762804|sp|Q8NXY8.1|CLPC_STAAW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
gi|300885956|gb|EFK81159.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
gi|377719213|gb|EHT43383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1835]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|418614178|ref|ZP_13177162.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
gi|374821459|gb|EHR85520.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU118]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|258422629|ref|ZP_05685535.1| endopeptidase [Staphylococcus aureus A9635]
gi|417890327|ref|ZP_12534404.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|418308157|ref|ZP_12919810.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|418559680|ref|ZP_13124215.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|418888425|ref|ZP_13442562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
gi|418993239|ref|ZP_13540878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|257847201|gb|EEV71209.1| endopeptidase [Staphylococcus aureus A9635]
gi|341855054|gb|EGS95908.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21200]
gi|365241637|gb|EHM82381.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21194]
gi|371974523|gb|EHO91853.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus 21252]
gi|377747202|gb|EHT71168.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG290]
gi|377754877|gb|EHT78782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1524]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|251809941|ref|ZP_04824414.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875025|ref|ZP_06283900.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|417646131|ref|ZP_12296010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|417657343|ref|ZP_12307008.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|417911486|ref|ZP_12555191.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|417914018|ref|ZP_12557673.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|418326361|ref|ZP_12937547.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|418412965|ref|ZP_12986212.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
gi|418617569|ref|ZP_13180460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|418621530|ref|ZP_13184299.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|418624700|ref|ZP_13187370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|418629608|ref|ZP_13192105.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|418664665|ref|ZP_13226132.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|419770348|ref|ZP_14296428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|419772786|ref|ZP_14298812.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|420169340|ref|ZP_14675941.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|420171652|ref|ZP_14678190.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|420172258|ref|ZP_14678768.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|420182216|ref|ZP_14688354.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|420186453|ref|ZP_14692521.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|420188161|ref|ZP_14694175.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|420195785|ref|ZP_14701572.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|420203004|ref|ZP_14708590.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|420207055|ref|ZP_14712558.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|420208689|ref|ZP_14714147.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|420213834|ref|ZP_14719116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|420218208|ref|ZP_14723306.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|421607888|ref|ZP_16049122.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|251806484|gb|EES59141.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296353|gb|EFA88872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis SK135]
gi|329729477|gb|EGG65880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU144]
gi|329734648|gb|EGG70955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU028]
gi|341653063|gb|EGS76836.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU105]
gi|341653849|gb|EGS77614.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU109]
gi|365225772|gb|EHM67010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU071]
gi|374410321|gb|EHQ81080.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU081]
gi|374817996|gb|EHR82168.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU120]
gi|374826897|gb|EHR90773.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU125]
gi|374828761|gb|EHR92586.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU123]
gi|374833371|gb|EHR97059.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU127]
gi|383357294|gb|EID34769.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-250]
gi|383358879|gb|EID36321.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
aureus subsp. aureus IS-K]
gi|394231370|gb|EJD77000.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM087]
gi|394237114|gb|EJD82609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM070]
gi|394242898|gb|EJD88275.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM067]
gi|394250200|gb|EJD95394.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM049]
gi|394252169|gb|EJD97210.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM040]
gi|394255421|gb|EJE00372.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM039]
gi|394262906|gb|EJE07658.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM021]
gi|394268877|gb|EJE13428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM018]
gi|394276375|gb|EJE20716.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM008]
gi|394281390|gb|EJE25639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM003]
gi|394284232|gb|EJE28386.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05005]
gi|394284688|gb|EJE28790.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH05001]
gi|406656502|gb|EKC82907.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
[Staphylococcus epidermidis AU12-03]
gi|410879558|gb|EKS27399.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
epidermidis BVS058A4]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|440785432|ref|ZP_20962189.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
gi|440218328|gb|ELP57550.1| ATPase with chaperone activity clpC, two ATP-binding domain protein
[Clostridium pasteurianum DSM 525]
Length = 812
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+ +H GTE IL+GIL E ++ K L G+T+ VR+ + GKGD + E
Sbjct: 20 EAQMFQHGYIGTEHILLGILKEENGISKKILNNLGITIDAVRNLIAEYEGKGDVDLYRNE 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG--FSDEK 122
PLT +R+++ + + + N ++ +LL + E + IL L F +
Sbjct: 80 -VPLTPRTKRLLEISA-LEATNLNHNYISPEHILLALIREGEGVAFTILGNLNADFDRLR 137
Query: 123 AKELESLSSEPGSV 136
+ LE L++ G+V
Sbjct: 138 KEILEKLAAGEGNV 151
>gi|282924437|ref|ZP_06332109.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|418911193|ref|ZP_13465176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|418927840|ref|ZP_13481726.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
gi|282592848|gb|EFB97852.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
aureus A9765]
gi|377724571|gb|EHT48686.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG547]
gi|377737752|gb|EHT61761.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
aureus subsp. aureus CIG1612]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|262049567|ref|ZP_06022436.1| endopeptidase [Staphylococcus aureus D30]
gi|259162307|gb|EEW46880.1| endopeptidase [Staphylococcus aureus D30]
Length = 818
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|416127894|ref|ZP_11597159.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|418328513|ref|ZP_12939624.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418631361|ref|ZP_13193825.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|418634140|ref|ZP_13196536.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|420178488|ref|ZP_14684819.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|420179587|ref|ZP_14685875.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|420191066|ref|ZP_14697002.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|420200939|ref|ZP_14706577.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|420203524|ref|ZP_14709086.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|420233736|ref|ZP_14738315.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
gi|319399727|gb|EFV87976.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
epidermidis FRI909]
gi|365231831|gb|EHM72848.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374835462|gb|EHR99072.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU128]
gi|374837442|gb|EHS01006.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis VCU129]
gi|394246423|gb|EJD91681.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM057]
gi|394253576|gb|EJD98581.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM053]
gi|394258024|gb|EJE02919.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM037]
gi|394267420|gb|EJE12013.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM031]
gi|394274485|gb|EJE18901.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM015]
gi|394304910|gb|EJE48301.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIH051475]
Length = 817
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|291459189|ref|ZP_06598579.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291418443|gb|EFE92162.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 828
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPEH 65
A L H GTE IL+G+ EGT+LAAK L ANG+ K+ D + + D +
Sbjct: 19 AESLHHNYIGTEHILLGLRREGTALAAKVLAANGIEEEKILDMISRFLSP-DSNVTVADR 77
Query: 66 PPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
T A+RV+D A+ + S V +L+ I E S +I+ LG
Sbjct: 78 SGYTPSARRVLDAAI-QEANRNRSKLVGTEHILISILKEPSSAASRIITTLG 128
>gi|420164359|ref|ZP_14671089.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
gi|394231748|gb|EJD77371.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
epidermidis NIHLM095]
Length = 773
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQMGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|217967862|ref|YP_002353368.1| ATPase [Dictyoglomus turgidum DSM 6724]
gi|217336961|gb|ACK42754.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
Length = 823
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFF 60
+ + EAR+L + T GTE IL+G++ E +AA+ L G+ L ++R+E +++G+GD
Sbjct: 15 LAQEEARRLNYSTVGTEHILLGLIREEGGIAAQVLINLGLDLNQLRNEIERLIGRGDGTS 74
Query: 61 FSPEHPPLTEDAQRVIDWA 79
+ P T A++V+++A
Sbjct: 75 YGA--LPFTSRAKKVLEYA 91
>gi|374992943|ref|YP_004968442.1| chaperone ATPase [Desulfosporosinus orientis DSM 765]
gi|357211309|gb|AET65927.1| ATPase with chaperone activity, ATP-binding subunit
[Desulfosporosinus orientis DSM 765]
Length = 813
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA+++ H GTE IL+G++ EG +AA+ L V L K+R + ++ G G P
Sbjct: 19 EAKRMGHQVVGTEHILLGLIQEGEGIAAQALLGMNVDLAKIRTQVEQLTGVG-----QPH 73
Query: 65 HPPL--TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
+ + T ++V++ A + + + LLLG+ E + +ILA L S E+
Sbjct: 74 NAEVGFTPRVKKVLELANEEAYRQ-EVNYIGTEHLLLGLIMEGEGIAARILANLNVSPER 132
>gi|332800110|ref|YP_004461609.1| ATPase AAA-2 domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438003416|ref|YP_007273159.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
gi|332697845|gb|AEE92302.1| ATPase AAA-2 domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|432180210|emb|CCP27183.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Tepidanaerobacter acetatoxydans Re1]
Length = 813
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+L H GTE +L+G+L EG +AA+ L GV KVR + ++G G F P
Sbjct: 19 EARRLNHNVVGTEHLLLGLLREGEGVAARALINLGVDADKVRSQVEMMIGVGPF----PI 74
Query: 65 HPPL--TEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
P+ T A+RV++ A+D + G++ V +LLG+ E + ++LA LG S +K
Sbjct: 75 QGPIGYTPRAKRVMELAIDESRRLGHN-YVGTEHILLGLIREGEGVAAQVLANLGVSLDK 133
Query: 123 AKE 125
A+E
Sbjct: 134 ARE 136
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIV 53
E+R+L H GTE IL+G++ EG +AA+ L GV+L K R+E + ++
Sbjct: 94 ESRRLGHNYVGTEHILLGLIREGEGVAAQVLANLGVSLDKAREEVLNLL 142
>gi|414161188|ref|ZP_11417449.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876450|gb|EKS24356.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 821
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + G+T V E K++G+G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFGITEDLVVTEVEKLIGQGQEHIGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|363899121|ref|ZP_09325632.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|395209294|ref|ZP_10398388.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
gi|361959451|gb|EHL12738.1| hypothetical protein HMPREF9625_00292 [Oribacterium sp. ACB1]
gi|394704925|gb|EJF12454.1| negative regulator of genetic competence ClpC/MecB [Oribacterium
sp. ACB8]
Length = 818
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 6 ARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGK-GDFFFFSPE 64
A + H GTE IL+G++ EGT++A K L AN VT K+ + K + G P
Sbjct: 19 AEECHHQYIGTEHILLGLVREGTAVAGKVLKANNVTEDKIIEMIAKFISTDGKLSIADP- 77
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEK 122
T A+R+++ A+ +SG S V LLL + + + +I++ LG S +K
Sbjct: 78 -SGYTPSAKRLLEQAMQEAKESG-SHLVGTEHLLLAMLKDGNCVASRIISTLGASAQK 133
>gi|417907371|ref|ZP_12551144.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
gi|341596264|gb|EGS38880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
capitis VCU116]
Length = 817
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEQVGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTPR---AKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|425469734|ref|ZP_18848646.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
gi|389880387|emb|CCI38853.1| ATP-dependent Clp protease ATP-binding subunit clpA homolog
[Microcystis aeruginosa PCC 9701]
Length = 795
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR+ H GTE +L+G++ E T+ AA L VTL + R + G+G +SP
Sbjct: 19 EARRTGHSVVGTEHLLLGLIGEATATAALILKDLKVTLHESRRLIEGMTGRGT--GYSPV 76
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALG 117
+ P T A+++ + A + G + LLL I S+ +S KIL G
Sbjct: 77 NIPFTPKAKKMFEQAFQEARQLGEQA-IAPEHLLLAITSDPESLAAKILIMQG 128
>gi|319891481|ref|YP_004148356.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|386320177|ref|YP_006016340.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
gi|317161177|gb|ADV04720.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
regulator of genetic competence clcC/mecB
[Staphylococcus pseudintermedius HKU10-03]
gi|323465348|gb|ADX77501.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
pseudintermedius ED99]
Length = 819
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFDITEDKVIEEVEKLIGHGQEQMGALH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTP---RAKKVIELSMDEARKLQHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL+H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLQHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|400293862|ref|ZP_10795699.1| Clp amino terminal domain protein, partial [Actinomyces naeslundii
str. Howell 279]
gi|399901043|gb|EJN83961.1| Clp amino terminal domain protein, partial [Actinomyces naeslundii
str. Howell 279]
Length = 184
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EAR L H GTE +L+G++ EG +AAK L + ++L VR + ++I+G+G +P
Sbjct: 19 EARALNHNYIGTEHLLLGLIHEGEGVAAKALESMDISLDAVRGQVIEIIGEGQ---SAPT 75
Query: 65 -HPPLTEDAQRVIDWAVDHKLKSGNS 89
H P T ++V + ++ L+ G++
Sbjct: 76 GHIPFTPRGKKVFELSMREALQLGHN 101
>gi|314937170|ref|ZP_07844517.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
gi|313655789|gb|EFS19534.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
hominis subsp. hominis C80]
Length = 823
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVGKGDFFFFSPE 64
EA +L H GTE +L+G++ E +AAK L + +T KV +E K++G G +
Sbjct: 20 EAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQEHSGTLH 79
Query: 65 HPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKILAALGFSDEKAK 124
+ P A++VI+ ++D K ++ V +LLG+ E + ++ A L + KA+
Sbjct: 80 YTPR---AKKVIELSMDEARKLHHNF-VGTEHILLGLIRENEGVAARVFANLDLNITKAR 135
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 5 EARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDESVKIVG 54
EARKL H GTE IL+G++ E +AA+ + + K R + VK +G
Sbjct: 94 EARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALG 143
>gi|315640281|ref|ZP_07895398.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
italicus DSM 15952]
gi|315483943|gb|EFU74422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Enterococcus
italicus DSM 15952]
Length = 826
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 1 MGELEARKLKHPTTGTEAILMGILVEGTSLAAKFLWANGVTLFKVRDE--------SVKI 52
+ + EA+ KH + G+E +L+ +++E +A K L V VR+E VK+
Sbjct: 15 IAQEEAKYFKHQSVGSEHLLLALIIEQEGIAGKVLREMNVQENDVREEIEHLTGYGMVKV 74
Query: 53 VGKGDFFFFSPEHPPLTEDAQRVIDWAVDHKLKSGNSGEVTASDLLLGIWSETDSPGHKI 112
+G F +SP A+++ +A D + G S ++ LLLG+ + + +I
Sbjct: 75 YPEGSFLPYSPR-------ARQIFAYAGDEAKRFG-SQQIGTEHLLLGLMRDEEILASRI 126
Query: 113 LAALGFSDEKAKEL 126
+ LGFS K ++L
Sbjct: 127 VLNLGFSLAKVRQL 140
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,325,891,647
Number of Sequences: 23463169
Number of extensions: 91537530
Number of successful extensions: 157062
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 153625
Number of HSP's gapped (non-prelim): 3269
length of query: 138
length of database: 8,064,228,071
effective HSP length: 103
effective length of query: 35
effective length of database: 9,942,488,960
effective search space: 347987113600
effective search space used: 347987113600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)