Query 032559
Match_columns 138
No_of_seqs 21 out of 23
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 04:12:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032559.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032559hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s9ca2 d.38.1.4 (A:10-163) 2- 62.6 2.8 0.0002 27.7 3.0 37 58-98 108-144 (154)
2 d1fmka3 d.144.1.7 (A:249-533) 43.3 6.5 0.00047 28.1 2.5 32 68-106 4-39 (285)
3 d1kkha2 d.58.26.3 (A:181-317) 41.2 3.8 0.00028 27.8 0.8 17 83-99 92-108 (137)
4 d1kvka2 d.58.26.3 (A:226-394) 35.4 6.2 0.00045 26.8 1.2 18 83-100 100-117 (169)
5 d1u59a_ d.144.1.7 (A:) Tyrosin 31.9 7.8 0.00057 27.6 1.3 29 67-104 1-29 (285)
6 d1pn2a1 d.38.1.4 (A:4-151) 2-e 27.2 31 0.0023 22.9 3.8 34 58-91 99-134 (148)
7 d1ryp2_ d.153.1.4 (2:) Proteas 26.5 21 0.0015 24.4 2.8 34 52-87 11-51 (233)
8 d1iruk_ d.153.1.4 (K:) Proteas 25.5 49 0.0036 20.7 4.3 16 72-87 29-44 (199)
9 d2adza1 b.55.1.1 (A:1-43,A:117 23.5 22 0.0016 24.4 2.3 39 88-130 14-56 (105)
10 g1rtf.1 b.47.1.2 (A:,B:) Two-c 22.7 42 0.003 21.6 3.6 41 55-104 207-247 (260)
11 d2dj4a1 b.1.18.10 (A:8-108) Fi 22.4 77 0.0056 19.1 4.7 33 96-129 61-93 (101)
12 d1yarh1 d.153.1.4 (H:1-203) Pr 21.1 47 0.0034 21.9 3.7 17 71-87 27-43 (203)
13 d2paga1 d.369.1.1 (A:1-135) Hy 20.6 29 0.0021 23.3 2.5 62 2-66 36-100 (135)
14 d1q5qh_ d.153.1.4 (H:) Proteas 20.1 59 0.0043 21.4 4.1 17 71-87 27-43 (224)
No 1
>d1s9ca2 d.38.1.4 (A:10-163) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.60 E-value=2.8 Score=27.72 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=18.3
Q ss_pred ecccceEEEEEeeccCCCCceEEeeceeEEeeeccCCCCcc
Q 032559 58 DIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFS 98 (138)
Q Consensus 58 DiGGGLvl~R~I~i~k~~pki~~I~SsI~ArsVGAgSGGfS 98 (138)
|-|.|.+...++..-.+.-.++...++++.| |+|||+
T Consensus 108 dk~~g~~~~~~~~~~~~ge~v~t~~~t~~~R----G~Gg~g 144 (154)
T d1s9ca2 108 DKGSGVVIIMDVYSYSEKELICHNQFSLFLV----GSGGFG 144 (154)
T ss_dssp -----CEEEEEEEEESSSSEEEEEEEEEEC-----------
T ss_pred EcCCcceeEEEEEEccCCcEEEEEEEEEEEE----cCCCCC
Confidence 3456666666666655667788888888888 457774
No 2
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.33 E-value=6.5 Score=28.10 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=21.9
Q ss_pred EeeccCCCCce----EEeeceeEEeeeccCCCCcceeEEeeeC
Q 032559 68 KLTIPKDNPKI----FKIDSKILARKVGAGSGGFSRKFSSVSS 106 (138)
Q Consensus 68 ~I~i~k~~pki----~~I~SsI~ArsVGAgSGGfSrlftaig~ 106 (138)
.|.+.||...| ++|...| |+||||..|.+...
T Consensus 4 ~~~~~~~~~~i~~~~~~i~~~i-------G~G~fg~Vy~~~~~ 39 (285)
T d1fmka3 4 TQGLAKDAWEIPRESLRLEVKL-------GQGCFGEVWMGTWN 39 (285)
T ss_dssp CSSSSTTCSBCCGGGEEEEEEE-------EECSSCEEEEEEET
T ss_pred CCCCCCcceEcCHHHEEEeeEE-------eeCCCeEEEEEEEC
Confidence 45566666654 5555544 88999999998843
No 3
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=41.19 E-value=3.8 Score=27.77 Aligned_cols=17 Identities=35% Similarity=0.407 Sum_probs=13.5
Q ss_pred ceeEEeeeccCCCCcce
Q 032559 83 SKILARKVGAGSGGFSR 99 (138)
Q Consensus 83 SsI~ArsVGAgSGGfSr 99 (138)
..+-||-.|||.|||-=
T Consensus 92 ~g~GaKitGAGgGG~~i 108 (137)
T d1kkha2 92 FGFGAKLTGAGGGGCVI 108 (137)
T ss_dssp HSSEEEECSSSSSEEEE
T ss_pred cCCCcccccCCCCcEEE
Confidence 34689999999999743
No 4
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=35.41 E-value=6.2 Score=26.85 Aligned_cols=18 Identities=28% Similarity=0.516 Sum_probs=14.5
Q ss_pred ceeEEeeeccCCCCccee
Q 032559 83 SKILARKVGAGSGGFSRK 100 (138)
Q Consensus 83 SsI~ArsVGAgSGGfSrl 100 (138)
...-||-.|||-|||.=.
T Consensus 100 ~g~gaKltGAGgGGc~ia 117 (169)
T d1kvka2 100 HGLHSKLTGAGGGGCGIT 117 (169)
T ss_dssp TTCEEEECSSCSSSEEEE
T ss_pred cCccccccCCCCCCeEEE
Confidence 346799999999998754
No 5
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.86 E-value=7.8 Score=27.56 Aligned_cols=29 Identities=34% Similarity=0.540 Sum_probs=19.2
Q ss_pred EEeeccCCCCceEEeeceeEEeeeccCCCCcceeEEee
Q 032559 67 RKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSV 104 (138)
Q Consensus 67 R~I~i~k~~pki~~I~SsI~ArsVGAgSGGfSrlftai 104 (138)
|++.|.+++..+..+ .| |.|||+..|.+.
T Consensus 1 k~l~l~~~~~~~~~~--~i-------G~G~fg~Vy~~~ 29 (285)
T d1u59a_ 1 KKLFLKRDNLLIADI--EL-------GCGNFGSVRQGV 29 (285)
T ss_dssp CCCBCCGGGEEEEEE--EE-------ECCTTEEEEEEE
T ss_pred CceeecccCeEECCc--EE-------ecccCeEEEEEE
Confidence 456666666555432 12 789999999886
No 6
>d1pn2a1 d.38.1.4 (A:4-151) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=27.23 E-value=31 Score=22.92 Aligned_cols=34 Identities=12% Similarity=0.283 Sum_probs=20.6
Q ss_pred ecccceE-EEEEeecc-CCCCceEEeeceeEEeeec
Q 032559 58 DIGGGLI-LQRKLTIP-KDNPKIFKIDSKILARKVG 91 (138)
Q Consensus 58 DiGGGLv-l~R~I~i~-k~~pki~~I~SsI~ArsVG 91 (138)
|-|.|.+ ..+..... .+.-.+...-|+++.|..|
T Consensus 99 dKg~galv~~~~~~~d~~~Gelv~t~~st~~iRG~g 134 (148)
T d1pn2a1 99 PKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQ 134 (148)
T ss_dssp EETTEEEEEEEEEEEETTTCCEEEEEEEEEEETTCE
T ss_pred EcCCCcEEEEEEEEEECCCCcEEEEEEEEEEEECCC
Confidence 3344444 33333333 3457899999999999443
No 7
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.50 E-value=21 Score=24.40 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=22.8
Q ss_pred eEEEeeecccceEEEEE-------eeccCCCCceEEeeceeEE
Q 032559 52 SLMLEGDIGGGLILQRK-------LTIPKDNPKIFKIDSKILA 87 (138)
Q Consensus 52 ~l~lEgDiGGGLvl~R~-------I~i~k~~pki~~I~SsI~A 87 (138)
+|.|.++ +|.||+=+ +..+++.+||++||+.|..
T Consensus 11 ivgi~~~--dgVvlaaD~r~s~g~~~~~~~~~KI~~i~~~i~~ 51 (233)
T d1ryp2_ 11 VISMKYD--NGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV 51 (233)
T ss_dssp EEEEEET--TEEEEEEECCEEETTEEEESCCCCEEEETTTEEE
T ss_pred EEEEEEC--CEEEEEECCCcccCCeeecCCcceEEEeCCCEEE
Confidence 4555554 45666522 3456778999999998775
No 8
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=25.49 E-value=49 Score=20.65 Aligned_cols=16 Identities=44% Similarity=0.713 Sum_probs=12.8
Q ss_pred cCCCCceEEeeceeEE
Q 032559 72 PKDNPKIFKIDSKILA 87 (138)
Q Consensus 72 ~k~~pki~~I~SsI~A 87 (138)
.++.+||++|+..|..
T Consensus 29 ~~~~~Ki~~i~~~i~~ 44 (199)
T d1iruk_ 29 KDDHDKMFKMSEKILL 44 (199)
T ss_dssp ESSCCCEEECSSSEEE
T ss_pred cCCcceEEEecCcEEE
Confidence 4567999999998765
No 9
>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.45 E-value=22 Score=24.42 Aligned_cols=39 Identities=28% Similarity=0.468 Sum_probs=28.6
Q ss_pred eeeccCCCC----cceeEEeeeCCeeeeeeccccccCCCCCCeeEee
Q 032559 88 RKVGAGSGG----FSRKFSSVSSGTVNLELWSEERPVSKQSPLAVSH 130 (138)
Q Consensus 88 rsVGAgSGG----fSrlftaig~g~vnleLWSeeRpVSk~tPL~IsH 130 (138)
=-||+|||- .=|.+.+.+..++++-.++|.|-+ ||+.||
T Consensus 14 ~~~~~~~~~~~~rW~rVl~~L~ed~Lt~s~~~d~k~I----PLKmcy 56 (105)
T d2adza1 14 LRCGAGSGAGGERWQRVLLSLAEDALTVSPLSEAKHV----SLKMAY 56 (105)
T ss_dssp ECCCCSSSSSCCCCEEEEEEEETTEEEEESSCSCEEE----ETTTCE
T ss_pred EeeccCCCccccceeeeeeecccceEEeeccccccee----eeeeEE
Confidence 346666654 447788899999999988776554 788886
No 10
>g1rtf.1 b.47.1.2 (A:,B:) Two-chain tissue plasminogen activator (TC)-T-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.70 E-value=42 Score=21.57 Aligned_cols=41 Identities=22% Similarity=0.439 Sum_probs=23.5
Q ss_pred EeeecccceEEEEEeeccCCCCceEEeeceeEEeeeccCCCCcceeEEee
Q 032559 55 LEGDIGGGLILQRKLTIPKDNPKIFKIDSKILARKVGAGSGGFSRKFSSV 104 (138)
Q Consensus 55 lEgDiGGGLvl~R~I~i~k~~pki~~I~SsI~ArsVGAgSGGfSrlftai 104 (138)
..||.||.||... ++..-++=| .....++|..++-..||.|
T Consensus 207 C~gdsGgplv~~~-----~~~~~l~Gi----~s~~~~c~~~~~p~vytrv 247 (260)
T g1rtf.1 207 CQGDSGGPLVCLN-----DGRMTLVGI----ISWGLGCGQKDVPGVYTKV 247 (260)
T ss_dssp CTTCTTCEEEEEE-----TTEEEEEEE----EEECSSSSCTTCCEEEEEG
T ss_pred CCCCccCEEEEEE-----CCEEEEEEE----EEeCCCCCCCCCCEEEEEH
Confidence 5789999998864 222223333 3333445665555566654
No 11
>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.35 E-value=77 Score=19.07 Aligned_cols=33 Identities=12% Similarity=0.285 Sum_probs=24.1
Q ss_pred CcceeEEeeeCCeeeeeeccccccCCCCCCeeEe
Q 032559 96 GFSRKFSSVSSGTVNLELWSEERPVSKQSPLAVS 129 (138)
Q Consensus 96 GfSrlftaig~g~vnleLWSeeRpVSk~tPL~Is 129 (138)
=|.=.||.--+|.-.+.+.=..+|| +.||++|.
T Consensus 61 ~y~v~y~P~~~G~y~i~V~~~g~~I-~gSPF~v~ 93 (101)
T d2dj4a1 61 THTVTYTPSQEGPYMVSVKYADEEI-PRSPFKVK 93 (101)
T ss_dssp EEEEEECCSSCEEEEEEEEESSSBC-TTCSEEEE
T ss_pred EEEEEEEeCCCeeEEEEEEECCEEC-CCCCEEEE
Confidence 3555578778888888887777777 47888763
No 12
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=21.12 E-value=47 Score=21.93 Aligned_cols=17 Identities=29% Similarity=0.462 Sum_probs=14.2
Q ss_pred ccCCCCceEEeeceeEE
Q 032559 71 IPKDNPKIFKIDSKILA 87 (138)
Q Consensus 71 i~k~~pki~~I~SsI~A 87 (138)
.+++..||++||..|..
T Consensus 27 ~~~~~~KI~~i~~~i~~ 43 (203)
T d1yarh1 27 MHKNGKKLFQIDTYTGM 43 (203)
T ss_dssp EESCCCCEEEEETTEEE
T ss_pred ecCCcccEEEecCCeee
Confidence 56788999999998765
No 13
>d2paga1 d.369.1.1 (A:1-135) Hypothetical protein PSPTO5518 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=20.64 E-value=29 Score=23.35 Aligned_cols=62 Identities=15% Similarity=-0.001 Sum_probs=42.9
Q ss_pred ccCCCCccceee---eeecCceeeeccceeecCCccchhhhhhhhhhhCCCcceEEEeeecccceEEE
Q 032559 2 AHFPSGTQWLHS---RVDVNGYEEYCGTEYRSAGCTEEYSVVERSLQHGGEEESLMLEGDIGGGLILQ 66 (138)
Q Consensus 2 ~H~PSg~qWl~s---r~e~~GYEEysgtE~rsaGctEEY~Vi~R~l~~~~~ee~l~lEgDiGGGLvl~ 66 (138)
+.+|..+.++.- -+-++++|.++.++ ..+.+.-+.+.+....+.-..+.+.+. |-||++..-
T Consensus 36 ~~~P~~yk~fl~~~g~~~~g~~e~~~~~d--~~s~~~l~e~~~~~~~~glp~~~I~i~-~~~g~~ycl 100 (135)
T d2paga1 36 INIPFVFKEFLLTVSDVVYGSLEPVTVTD--PQSHTYLPEVCATAWDLGVPRELIPIC-QDGEDYYCV 100 (135)
T ss_dssp CCCCHHHHHHHHHHTTCCBTTBCBCBSSC--TTSTTBHHHHHHHHHHHTCCTTSEEEE-EETTEEEEE
T ss_pred CCCCHHHHHHHHHhCCeeeceEEEeecCC--CCccccHHHHHHHHHhhCCCCceEEEE-ECCCceEEE
Confidence 356777777653 35677889988876 345677777777777777777777775 668887653
No 14
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=20.11 E-value=59 Score=21.43 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=13.6
Q ss_pred ccCCCCceEEeeceeEE
Q 032559 71 IPKDNPKIFKIDSKILA 87 (138)
Q Consensus 71 i~k~~pki~~I~SsI~A 87 (138)
..++..||++|+..|.+
T Consensus 27 ~~~~~~KI~~i~~~i~~ 43 (224)
T d1q5qh_ 27 ASRDVEKVYVTDEYSAA 43 (224)
T ss_dssp EESCCCCEEEEETTEEE
T ss_pred ecCCcceEEEeCCcEEE
Confidence 45677999999998765
Done!