BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032560
MSSIDQSILMALTVTVNKYASLNVQAVHRREAKTPKTTGAKAKAAAAFHDIGRRGLLLSS
VVAAPQVNNDDSKTQLLQKYLKKSEENKAKNDKERMDSYYKRNYKDYFDFIEGSLKGKSE
QELSESEKGILEWLKTNK

High Scoring Gene Products

Symbol, full name Information P value
AT1G49975 protein from Arabidopsis thaliana 1.6e-38
PF14_0712
hypothetical protein
gene from Plasmodium falciparum 0.00084
PF14_0712
Putative uncharacterized protein
protein from Plasmodium falciparum 3D7 0.00084

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032560
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006176 - symbol:AT1G49975 species:3702 "Ara...   412  1.6e-38   1
GENEDB_PFALCIPARUM|PF14_0712 - symbol:PF14_0712 "hypothet...    98  0.00084   2
UNIPROTKB|Q8IK94 - symbol:PF14_0712 "Putative uncharacter...    98  0.00084   2


>TAIR|locus:505006176 [details] [associations]
            symbol:AT1G49975 species:3702 "Arabidopsis thaliana"
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0009522 "photosystem I"
            evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
            [GO:0042651 "thylakoid membrane" evidence=IEA] InterPro:IPR008796
            Pfam:PF05479 EMBL:CP002684 GO:GO:0015979 GO:GO:0042651
            GO:GO:0009522 EMBL:AY084774 EMBL:BT024576 IPI:IPI00534347
            RefSeq:NP_564561.1 UniGene:At.38122 STRING:Q8LFL5 PRIDE:Q8LFL5
            EnsemblPlants:AT1G49975.1 GeneID:841421 KEGG:ath:AT1G49975
            TAIR:At1g49975 InParanoid:Q8LFL5 OMA:NYKDYFE PhylomeDB:Q8LFL5
            ProtClustDB:CLSN2688620 Genevestigator:Q8LFL5 Uniprot:Q8LFL5
        Length = 129

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 90/140 (64%), Positives = 103/140 (73%)

Query:     1 MSSIDQSILMALTVTVNKYASLNVQAVHRREXXXXXXXXXXXXXXXXFHDIGRRGLLLSS 60
             MSSI QSILMALTVTVNKYAS NVQAV R +                  D+GRR +L SS
Sbjct:     1 MSSISQSILMALTVTVNKYASSNVQAVRRNDTKRHSLTAPPA-------DLGRRNILFSS 53

Query:    61 V--VAAPQVNNDDSKTQLLQKYLKKSEENKAKNDKERMDSYYKRNYKDYFDFIEGSLKGK 118
                +AA   ++D    QLLQKYLKK+EENKAKNDKER+DS+YKRNYKDYF+F+EGS+KGK
Sbjct:    54 TSFIAAALTSSD----QLLQKYLKKTEENKAKNDKERLDSFYKRNYKDYFEFVEGSIKGK 109

Query:   119 SEQELSESEKGILEWLKTNK 138
             +E ELSESEK ILEWLK NK
Sbjct:   110 TEAELSESEKRILEWLKANK 129


>GENEDB_PFALCIPARUM|PF14_0712 [details] [associations]
            symbol:PF14_0712 "hypothetical protein"
            species:5833 "Plasmodium falciparum" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
            RefSeq:XP_001348886.2 EnsemblProtists:PF14_0712:mRNA GeneID:812294
            KEGG:pfa:PF14_0712 EuPathDB:PlasmoDB:PF3D7_1474400
            HOGENOM:HOG000282174 ProtClustDB:CLSZ2446745 Uniprot:Q8IK94
        Length = 2977

 Score = 98 (39.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 24/70 (34%), Positives = 36/70 (51%)

Query:    68 NNDDSKTQLLQKYLKKSEENKAKNDKERMDSYYKRNYKDYFDFIEGSLKGKSEQELSESE 127
             +N     + L +++ K EENK KN KE+ DS Y   Y DYF+ I+     KS+ +  E +
Sbjct:   967 DNSSRDKKYLMEHINKEEENKEKN-KEKYDSIY---YYDYFEIIKDIYVKKSKNKKDEKK 1022

Query:   128 KGILEWLKTN 137
                 +   TN
Sbjct:  1023 MSTYKMTTTN 1032

 Score = 33 (16.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query:    50 DIGRRGLLLSSVVAAPQVNNDDSK 73
             +I   GLL  +VV +  + + D+K
Sbjct:   660 EISNNGLLDLNVVCSIYIKSYDNK 683


>UNIPROTKB|Q8IK94 [details] [associations]
            symbol:PF14_0712 "Putative uncharacterized protein"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0020011 "apicoplast" evidence=RCA] EMBL:AE014187
            RefSeq:XP_001348886.2 EnsemblProtists:PF14_0712:mRNA GeneID:812294
            KEGG:pfa:PF14_0712 EuPathDB:PlasmoDB:PF3D7_1474400
            HOGENOM:HOG000282174 ProtClustDB:CLSZ2446745 Uniprot:Q8IK94
        Length = 2977

 Score = 98 (39.6 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 24/70 (34%), Positives = 36/70 (51%)

Query:    68 NNDDSKTQLLQKYLKKSEENKAKNDKERMDSYYKRNYKDYFDFIEGSLKGKSEQELSESE 127
             +N     + L +++ K EENK KN KE+ DS Y   Y DYF+ I+     KS+ +  E +
Sbjct:   967 DNSSRDKKYLMEHINKEEENKEKN-KEKYDSIY---YYDYFEIIKDIYVKKSKNKKDEKK 1022

Query:   128 KGILEWLKTN 137
                 +   TN
Sbjct:  1023 MSTYKMTTTN 1032

 Score = 33 (16.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query:    50 DIGRRGLLLSSVVAAPQVNNDDSK 73
             +I   GLL  +VV +  + + D+K
Sbjct:   660 EISNNGLLDLNVVCSIYIKSYDNK 683


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.127   0.340    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       122   0.00091  102 3  11 23  0.43    31
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.11u 0.10s 16.21t   Elapsed:  00:00:01
  Total cpu time:  16.11u 0.10s 16.21t   Elapsed:  00:00:01
  Start:  Thu May  9 16:16:35 2013   End:  Thu May  9 16:16:36 2013

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