BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032561
MASIRSFGKWTVDHQICPQHTTIQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEAR
ERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKL
LAGNRSIAEVYLGFVYIY

High Scoring Gene Products

Symbol, full name Information P value
AT1G20810 protein from Arabidopsis thaliana 5.2e-33
Os02g0117600
Peptidyl-prolyl cis-trans isomerase
protein from Oryza sativa Japonica Group 6.4e-28
FKB16-4
Peptidyl-prolyl cis-trans isomerase
protein from Chlamydomonas reinhardtii 6.4e-09
AT3G10060 protein from Arabidopsis thaliana 9.8e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032561
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030502 - symbol:AT1G20810 "AT1G20810" species...   360  5.2e-33   1
UNIPROTKB|Q0E4I6 - symbol:Os02g0117600 "Peptidyl-prolyl c...   312  6.4e-28   1
UNIPROTKB|A8JC71 - symbol:FKB16-4 "Peptidyl-prolyl cis-tr...   134  6.4e-09   1
TAIR|locus:2100063 - symbol:AT3G10060 "AT3G10060" species...   124  9.8e-08   1


>TAIR|locus:2030502 [details] [associations]
            symbol:AT1G20810 "AT1G20810" species:3702 "Arabidopsis
            thaliana" [GO:0000413 "protein peptidyl-prolyl isomerization"
            evidence=IBA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IBA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009543
            "chloroplast thylakoid lumen" evidence=ISS;IDA] [GO:0016020
            "membrane" evidence=IBA] [GO:0018208 "peptidyl-proline
            modification" evidence=IBA] [GO:0031977 "thylakoid lumen"
            evidence=IDA] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0006457
            GO:GO:0016020 EMBL:AC069251 GO:GO:0031977 KO:K01802 GO:GO:0003755
            GO:GO:0009543 HOGENOM:HOG000154887 GO:GO:0005528 InterPro:IPR023566
            PANTHER:PTHR10516 EMBL:AK117407 EMBL:BT005089 IPI:IPI00523910
            PIR:E86340 RefSeq:NP_173504.1 UniGene:At.41686
            ProteinModelPortal:Q9LM71 SMR:Q9LM71 STRING:Q9LM71 PaxDb:Q9LM71
            PRIDE:Q9LM71 EnsemblPlants:AT1G20810.1 GeneID:838672
            KEGG:ath:AT1G20810 TAIR:At1g20810 eggNOG:NOG246660
            InParanoid:Q9LM71 OMA:DNPNGLF PhylomeDB:Q9LM71
            ProtClustDB:CLSN2679433 Genevestigator:Q9LM71 GermOnline:AT1G20810
            Uniprot:Q9LM71
        Length = 232

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 82/143 (57%), Positives = 104/143 (72%)

Query:     1 MASIRSFGKWTVD-HQICPQHTTI-QAKQA-----VV--SIPISRR-AAAILISSLPFS- 49
             MASI S  +W  + H   P+ T+I +A Q+     VV  S+PISRR A+ IL+SS+P + 
Sbjct:     1 MASISSLHRWASNQHSRLPRITSISEADQSRPINQVVAFSVPISRRDASIILLSSIPLTS 60

Query:    50 -VISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFR 108
               +  P  SEARERR++K IPLE+Y T  +GLK+YDI EGKGPVA +GST QVHFDC +R
Sbjct:    61 FFVLTPSSSEARERRSRKVIPLEEYSTGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYR 120

Query:   109 GITAVSSRESKLLAGNRSIAEVY 131
              ITA+S+RESKLLAGNRSIA+ Y
Sbjct:   121 SITAISTRESKLLAGNRSIAQPY 143


>UNIPROTKB|Q0E4I6 [details] [associations]
            symbol:Os02g0117600 "Peptidyl-prolyl cis-trans isomerase"
            species:39947 "Oryza sativa Japonica Group" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0009507 GO:GO:0006457 GO:GO:0016020 GO:GO:0031977
            EMBL:AP008208 KO:K01802 GO:GO:0003755 GO:GO:0005528
            InterPro:IPR023566 PANTHER:PTHR10516 ProtClustDB:CLSN2679433
            RefSeq:NP_001045688.2 UniGene:Os.79794 STRING:Q0E4I6 GeneID:4328090
            KEGG:osa:4328090 Gramene:Q0E4I6 Uniprot:Q0E4I6
        Length = 234

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 64/96 (66%), Positives = 75/96 (78%)

Query:    36 RRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDGLKYYDIVEGKGPVAQK 95
             RRAAA L+S+  F +   P    AR  R +  + LEDY T+ DGLKYYD+VEGKGP A+K
Sbjct:    53 RRAAAQLLSAAGFLIAVSPPSLAAR--RGRMVVSLEDYVTSPDGLKYYDLVEGKGPTAEK 110

Query:    96 GSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEVY 131
             GSTVQVHFDCI+RGITAVSSRE+KLLAGNRSIA+ Y
Sbjct:   111 GSTVQVHFDCIYRGITAVSSREAKLLAGNRSIAQPY 146


>UNIPROTKB|A8JC71 [details] [associations]
            symbol:FKB16-4 "Peptidyl-prolyl cis-trans isomerase"
            species:3055 "Chlamydomonas reinhardtii" [GO:0000413 "protein
            peptidyl-prolyl isomerization" evidence=ISS] [GO:0003755
            "peptidyl-prolyl cis-trans isomerase activity" evidence=ISS]
            [GO:0005528 "FK506 binding" evidence=ISS] [GO:0016020 "membrane"
            evidence=ISS] [GO:0018208 "peptidyl-proline modification"
            evidence=ISS] InterPro:IPR001179 Pfam:PF00254 PROSITE:PS50059
            GO:GO:0006457 GO:GO:0016020 InterPro:IPR006311 GO:GO:0009535
            PROSITE:PS51318 GO:GO:0003755 eggNOG:COG0545 GO:GO:0005528
            InterPro:IPR023566 PANTHER:PTHR10516 EMBL:DS496156
            RefSeq:XP_001699596.1 UniGene:Cre.624 ProteinModelPortal:A8JC71
            PRIDE:A8JC71 EnsemblPlants:EDO98498 GeneID:5725115
            KEGG:cre:CHLREDRAFT_193859 OMA:WASAPTR
            BioCyc:CHLAMY:CHLREDRAFT_193859-MONOMER Uniprot:A8JC71
        Length = 228

 Score = 134 (52.2 bits), Expect = 6.4e-09, P = 6.4e-09
 Identities = 38/104 (36%), Positives = 53/104 (50%)

Query:    21 TTIQAKQA-VVSIPISRRAAAILISSLPFSVISLPKCSEARERRNKKAIPLEDYHTTSDG 79
             TT +A  A  VS+  +    A    +L ++   L    E   RR K  IP ED+     G
Sbjct:    45 TTRRALLAGAVSLAAAGAVQAPPAQALEYTTDPLNYKKELARRRRK--IPEEDFKEGERG 102

Query:    80 LKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAG 123
             +KYYDI EG G  A+ G  V VH+D  +R IT ++SR+   + G
Sbjct:   103 IKYYDITEGGGAEARVGERVAVHYDVKWRNITFMTSRQGMGVTG 146


>TAIR|locus:2100063 [details] [associations]
            symbol:AT3G10060 "AT3G10060" species:3702 "Arabidopsis
            thaliana" [GO:0000413 "protein peptidyl-prolyl isomerization"
            evidence=IBA] [GO:0003755 "peptidyl-prolyl cis-trans isomerase
            activity" evidence=ISS;IBA] [GO:0005528 "FK506 binding"
            evidence=ISS;IBA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006457
            "protein folding" evidence=IEA] [GO:0018208 "peptidyl-proline
            modification" evidence=IBA] [GO:0009543 "chloroplast thylakoid
            lumen" evidence=ISS;IDA] [GO:0009579 "thylakoid" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0042631 "cellular response to water
            deprivation" evidence=RCA] InterPro:IPR001179 Pfam:PF00254
            PROSITE:PS50059 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0006457 GO:GO:0009535 GO:GO:0003755 GO:GO:0009543
            EMBL:AC010927 eggNOG:COG0545 HOGENOM:HOG000154887 GO:GO:0005528
            InterPro:IPR023566 PANTHER:PTHR10516 EMBL:AY094442 EMBL:AY122895
            IPI:IPI00546942 RefSeq:NP_187617.1 UniGene:At.23399
            UniGene:At.39997 HSSP:Q02790 ProteinModelPortal:Q9SR70 SMR:Q9SR70
            STRING:Q9SR70 PaxDb:Q9SR70 PRIDE:Q9SR70 ProMEX:Q9SR70
            EnsemblPlants:AT3G10060.1 GeneID:820167 KEGG:ath:AT3G10060
            TAIR:At3g10060 InParanoid:Q9SR70 OMA:KYYDIKV PhylomeDB:Q9SR70
            ProtClustDB:CLSN2915705 Genevestigator:Q9SR70 Uniprot:Q9SR70
        Length = 230

 Score = 124 (48.7 bits), Expect = 9.8e-08, P = 9.8e-08
 Identities = 34/107 (31%), Positives = 53/107 (49%)

Query:    23 IQAKQAVVSIPISRRAAAILISSLPFSVISLPKCSEAR----ERRNKKA--IPLEDYHTT 76
             I+ +  +   P+S     +L+  L  +   +     A      RR  +A  +P  D+ T 
Sbjct:    44 IRTETVLPPAPVSCEGRRVLLGCLLATASGILSTGSAEAVSTSRRALRASKLPESDFTTL 103

Query:    77 SDGLKYYDIVEGKGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAG 123
              +GLKYYDI  G G  A KGS V VH+   ++GIT ++SR+   + G
Sbjct:   104 PNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGG 150


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       138   0.00091  102 3  11 22  0.40    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.08u 0.11s 13.19t   Elapsed:  00:00:01
  Total cpu time:  13.09u 0.11s 13.20t   Elapsed:  00:00:01
  Start:  Thu May  9 16:17:40 2013   End:  Thu May  9 16:17:41 2013

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