Query 032567
Match_columns 138
No_of_seqs 98 out of 100
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 04:23:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032567.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032567hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1z5ye1 c.47.1.10 (E:49-184) T 41.9 7.8 0.00056 24.8 2.5 29 105-133 98-134 (136)
2 d1rtta_ c.23.5.4 (A:) Hypothet 30.9 12 0.00084 25.6 2.1 84 46-130 64-172 (174)
3 d2aaaa1 b.71.1.1 (A:382-476) F 28.2 36 0.0026 22.1 4.2 35 49-86 10-44 (95)
4 d2guya1 b.71.1.1 (A:382-476) F 26.0 42 0.0031 21.8 4.2 33 50-85 11-43 (95)
5 d1i8ya_ g.3.16.1 (A:) N-termin 24.4 7.1 0.00051 20.8 -0.1 7 4-10 21-27 (28)
6 d1g26a_ g.3.16.1 (A:) N-termin 24.3 6.7 0.00049 21.5 -0.2 10 3-12 22-31 (31)
7 d1ce3a_ g.69.1.1 (A:) Multidom 22.6 14 0.0011 22.4 1.1 11 106-116 40-50 (54)
8 d1op4a_ b.1.6.1 (A:) N-cadheri 22.5 50 0.0036 21.3 4.1 27 65-91 62-88 (136)
9 d3dmca1 d.17.4.10 (A:1-133) Un 21.1 21 0.0015 22.6 1.7 30 74-113 102-131 (133)
10 d1c8ua2 d.38.1.3 (A:116-286) T 21.1 16 0.0012 24.5 1.2 18 103-120 146-163 (171)
11 d1m4la_ c.56.5.1 (A:) Carboxyp 20.3 14 0.001 27.7 0.9 12 2-13 161-172 (307)
No 1
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=41.85 E-value=7.8 Score=24.79 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=20.7
Q ss_pred cceeccCceEeec--------chHHHHHHHHHHhhcC
Q 032567 105 TQWFAKDGVLVEG--------LFWKDVLALLDEYAIE 133 (138)
Q Consensus 105 a~fFDenG~Lv~~--------lf~~eV~kL~~sl~~e 133 (138)
.=+||.||.++.- .++++|.+|.+.|.+|
T Consensus 98 ~~liD~~G~i~~~~~G~~~~~~l~~~i~~ll~kl~~e 134 (136)
T d1z5ye1 98 TFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSKE 134 (136)
T ss_dssp EEEECTTSCEEEEEESCCCHHHHHHHTHHHHHHHHHT
T ss_pred EEEEcCCCEEEEEEEcCCCHHHHHHHHHHHHHHHHHh
Confidence 4468888888632 4667778888887765
No 2
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.94 E-value=12 Score=25.63 Aligned_cols=84 Identities=14% Similarity=0.036 Sum_probs=49.2
Q ss_pred eeeeeeeeeccCC-CCCCC---CCcEEEee--cCCCCCCceEEEEEEeCCCCC---------------CC----CcceEE
Q 032567 46 IISIHHLRGKFFG-QGSFT---STGLVVSS--KLPRFSDLYTLTVASADPKSI---------------SA----GQPVEF 100 (138)
Q Consensus 46 ~~~~~~~l~t~d~-~G~~~---~~~w~iSS--slkKyDDkYtLtIt~~d~ks~---------------~~----r~e~s~ 100 (138)
+.+||+|++..|. .|+.| .+-+.+-| ..+-|..|.-.-++...|..+ .. +.+..+
T Consensus 64 i~~aD~iii~sP~y~~s~~~~lKn~iD~l~~~~~~~~~gK~~~~i~~sgG~~~~~~~~~~l~~~l~~~g~~~i~~~~~~v 143 (174)
T d1rtta_ 64 IRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLNKPEVMI 143 (174)
T ss_dssp HHHCSEEEEECCEETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHHTCEECCSSCEEE
T ss_pred hhcCCeEEEEccchhccccHHHHHHHHHHhcccccccCCCEEEEEEECCCccchHHHHHHHHHHHHHCCCEEcCCCEEEE
Confidence 4567777777532 22222 01111112 124577788888888665433 10 102333
Q ss_pred eecccceeccCceEeecchHHHHHHHHHHh
Q 032567 101 TKSVTQWFAKDGVLVEGLFWKDVLALLDEY 130 (138)
Q Consensus 101 tKSVa~fFDenG~Lv~~lf~~eV~kL~~sl 130 (138)
. ...+-||++|.+..+..+.-++++.++|
T Consensus 144 ~-~~~~~fd~~g~l~de~~~~~l~~~~~~l 172 (174)
T d1rtta_ 144 S-SAQNAFDAQGRLLDDKARELIQQQLQAL 172 (174)
T ss_dssp C-SGGGTBCSTTCBCCHHHHHHHHHHHHHH
T ss_pred e-chHhccCCCCCcCCHHHHHHHHHHHHHh
Confidence 3 3456689999999999888888888776
No 3
>d2aaaa1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=28.19 E-value=36 Score=22.09 Aligned_cols=35 Identities=23% Similarity=0.124 Sum_probs=30.3
Q ss_pred eeeeeeccCCCCCCCCCcEEEeecCCCCCCceEEEEEE
Q 032567 49 IHHLRGKFFGQGSFTSTGLVVSSKLPRFSDLYTLTVAS 86 (138)
Q Consensus 49 ~~~~l~t~d~~G~~~~~~w~iSSslkKyDDkYtLtIt~ 86 (138)
-++|+++|-++|. +.+.+=|...-....|+|++..
T Consensus 10 ~~~ia~rKG~~g~---qvi~VlsN~Gs~~~~ytl~~~~ 44 (95)
T d2aaaa1 10 SNTIAMAKGTSGS---QVITVLSNKGSSGSSYTLTLSG 44 (95)
T ss_dssp TTEEEEEESSTTT---CEEEEEECSCTTCCCEEEEECC
T ss_pred CcEEEEEcCCCCC---EEEEEEeCCCCCCCceEEEecC
Confidence 3678899888887 8999999999999999999864
No 4
>d2guya1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}
Probab=25.98 E-value=42 Score=21.81 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=29.1
Q ss_pred eeeeeccCCCCCCCCCcEEEeecCCCCCCceEEEEE
Q 032567 50 HHLRGKFFGQGSFTSTGLVVSSKLPRFSDLYTLTVA 85 (138)
Q Consensus 50 ~~~l~t~d~~G~~~~~~w~iSSslkKyDDkYtLtIt 85 (138)
+.++++|-+.|. +.+.+=|...-....|+|++.
T Consensus 11 ~~la~rKG~~g~---qvI~VlsN~Gs~~~~ytl~~~ 43 (95)
T d2guya1 11 TTIAMRKGTDGS---QIVTILSNKGASGDSYTLSLS 43 (95)
T ss_dssp TEEEEEESSTTS---CEEEEEECSCTTCCCEEEEEC
T ss_pred cEEEEEeCCCCC---EEEEEEeCCCCCCCceEEEec
Confidence 678889888887 899999999999999999885
No 5
>d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]}
Probab=24.44 E-value=7.1 Score=20.82 Aligned_cols=7 Identities=57% Similarity=2.038 Sum_probs=6.1
Q ss_pred CCccccc
Q 032567 4 DWFCGPF 10 (138)
Q Consensus 4 ~~~~~~~ 10 (138)
-|+|.||
T Consensus 21 vw~c~p~ 27 (28)
T d1i8ya_ 21 VWYCSPF 27 (28)
T ss_dssp CEEEETT
T ss_pred cEEeccC
Confidence 4999998
No 6
>d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.29 E-value=6.7 Score=21.49 Aligned_cols=10 Identities=40% Similarity=1.056 Sum_probs=8.2
Q ss_pred CCCccccccc
Q 032567 3 SDWFCGPFPL 12 (138)
Q Consensus 3 ~~~~~~~~~~ 12 (138)
..|+|-|||+
T Consensus 22 GaWgCCPf~~ 31 (31)
T d1g26a_ 22 GAWGCCPFTQ 31 (31)
T ss_dssp SCEEEEECCC
T ss_pred CceeeccCCC
Confidence 3699999984
No 7
>d1ce3a_ g.69.1.1 (A:) Multidomain proteinase inhibitor {Winged tobacco (Nicotiana alata) [TaxId: 4087]}
Probab=22.63 E-value=14 Score=22.39 Aligned_cols=11 Identities=36% Similarity=0.845 Sum_probs=9.5
Q ss_pred ceeccCceEee
Q 032567 106 QWFAKDGVLVE 116 (138)
Q Consensus 106 ~fFDenG~Lv~ 116 (138)
+||+.||+||=
T Consensus 40 ~yfs~dGtfvC 50 (54)
T d1ce3a_ 40 KYFSDDGTFVC 50 (54)
T ss_dssp EEECSSSCEEE
T ss_pred eeEcCCCcEEe
Confidence 68999999984
No 8
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.51 E-value=50 Score=21.33 Aligned_cols=27 Identities=7% Similarity=0.151 Sum_probs=22.4
Q ss_pred CcEEEeecCCCCCCceEEEEEEeCCCC
Q 032567 65 TGLVVSSKLPRFSDLYTLTVASADPKS 91 (138)
Q Consensus 65 ~~w~iSSslkKyDDkYtLtIt~~d~ks 91 (138)
-.+.+...|.+-...|+|+|+-.|+.+
T Consensus 62 G~I~~~~~ld~e~~~y~l~V~A~D~g~ 88 (136)
T d1op4a_ 62 GTVYAVRSFPLTAEQAKFLIYAQDKET 88 (136)
T ss_dssp TEEEEESCCSCSSSCEEEEEEEEETTT
T ss_pred EEEEEecccCcccceEEEEEEEEecCC
Confidence 457788888888889999999999754
No 9
>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}
Probab=21.07 E-value=21 Score=22.63 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=23.1
Q ss_pred CCCCCceEEEEEEeCCCCCCCCcceEEeecccceeccCce
Q 032567 74 PRFSDLYTLTVASADPKSISAGQPVEFTKSVTQWFAKDGV 113 (138)
Q Consensus 74 kKyDDkYtLtIt~~d~ks~~~r~e~s~tKSVa~fFDenG~ 113 (138)
+.|+-.|-..++++|||- .++.+|||.+|.
T Consensus 102 ~~~~~~~~~vf~v~dGkI----------~~~reY~ds~~~ 131 (133)
T d3dmca1 102 KPYKNRVAVSFDVRGDKI----------CSYREYFGSDGK 131 (133)
T ss_dssp EEEEEEEEEEEEEETTEE----------EEEEEEECSCSB
T ss_pred eEEeccEEEEEEEECCEE----------EEEEEEECCCCc
Confidence 347788888999998732 356799999996
No 10
>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}
Probab=21.07 E-value=16 Score=24.52 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=14.0
Q ss_pred cccceeccCceEeecchH
Q 032567 103 SVTQWFAKDGVLVEGLFW 120 (138)
Q Consensus 103 SVa~fFDenG~Lv~~lf~ 120 (138)
+-+.+||++|+||+..-|
T Consensus 146 ~~g~i~~~dG~LvAs~~Q 163 (171)
T d1c8ua2 146 VRGEFYTQDGVLVASTVQ 163 (171)
T ss_dssp EEEEEEETTCCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEE
Confidence 446789999999986543
No 11
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.33 E-value=14 Score=27.67 Aligned_cols=12 Identities=33% Similarity=0.758 Sum_probs=11.2
Q ss_pred CCCCccccccch
Q 032567 2 CSDWFCGPFPLS 13 (138)
Q Consensus 2 ~~~~~~~~~~~~ 13 (138)
|++||.||.|.|
T Consensus 161 ~~~~y~G~~p~s 172 (307)
T d1m4la_ 161 CSETYHGKYANS 172 (307)
T ss_dssp TSTTBCCSSTTC
T ss_pred CccCCCCCcccc
Confidence 899999999987
Done!