Query 032570
Match_columns 138
No_of_seqs 132 out of 1189
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 04:27:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ors_A N5-carboxyaminoimidazol 100.0 2.5E-62 8.5E-67 377.4 13.2 138 1-138 10-150 (163)
2 3trh_A Phosphoribosylaminoimid 100.0 5E-62 1.7E-66 377.5 14.5 138 1-138 13-153 (169)
3 3lp6_A Phosphoribosylaminoimid 100.0 5.4E-62 1.8E-66 378.8 13.7 138 1-138 14-152 (174)
4 1xmp_A PURE, phosphoribosylami 100.0 8.7E-62 3E-66 376.3 13.7 138 1-138 18-158 (170)
5 3kuu_A Phosphoribosylaminoimid 100.0 9E-62 3.1E-66 377.4 13.7 138 1-138 19-159 (174)
6 3oow_A Phosphoribosylaminoimid 100.0 2.4E-61 8.2E-66 372.8 14.3 138 1-138 12-152 (166)
7 1o4v_A Phosphoribosylaminoimid 100.0 2.3E-61 7.9E-66 377.6 13.8 138 1-138 20-158 (183)
8 1u11_A PURE (N5-carboxyaminoim 100.0 6.5E-61 2.2E-65 374.8 13.8 138 1-138 28-168 (182)
9 4b4k_A N5-carboxyaminoimidazol 100.0 1.5E-60 5.3E-65 372.1 14.8 138 1-138 29-169 (181)
10 3rg8_A Phosphoribosylaminoimid 100.0 4E-60 1.4E-64 364.1 14.8 136 1-138 9-145 (159)
11 4grd_A N5-CAIR mutase, phospho 100.0 3E-60 1E-64 368.4 14.1 138 1-138 19-159 (173)
12 2ywx_A Phosphoribosylaminoimid 100.0 4.4E-60 1.5E-64 363.1 13.4 134 1-138 6-140 (157)
13 2h31_A Multifunctional protein 100.0 1.1E-51 3.7E-56 356.5 14.7 134 1-137 272-407 (425)
14 2q5c_A NTRC family transcripti 96.9 0.0059 2E-07 46.7 9.4 117 7-137 14-140 (196)
15 2pju_A Propionate catabolism o 96.7 0.029 9.9E-07 44.2 11.9 120 7-137 22-152 (225)
16 3uhj_A Probable glycerol dehyd 96.6 0.003 1E-07 53.2 5.9 73 9-82 67-140 (387)
17 1jq5_A Glycerol dehydrogenase; 96.5 0.0047 1.6E-07 50.9 6.2 74 9-82 46-120 (370)
18 3ox4_A Alcohol dehydrogenase 2 96.4 0.0063 2.1E-07 50.8 6.7 75 9-83 47-141 (383)
19 1o2d_A Alcohol dehydrogenase, 96.0 0.022 7.6E-07 47.1 7.8 75 9-83 57-151 (371)
20 3ce9_A Glycerol dehydrogenase; 96.0 0.0093 3.2E-07 48.8 5.5 75 8-83 48-123 (354)
21 1rrm_A Lactaldehyde reductase; 95.7 0.016 5.5E-07 47.9 5.9 74 9-82 47-142 (386)
22 3hl0_A Maleylacetate reductase 95.7 0.0073 2.5E-07 50.1 3.8 75 7-82 46-121 (353)
23 1sg6_A Pentafunctional AROM po 95.7 0.029 9.9E-07 46.9 7.5 73 9-81 51-140 (393)
24 3bfj_A 1,3-propanediol oxidore 95.7 0.014 5E-07 48.3 5.5 74 9-82 51-144 (387)
25 1ta9_A Glycerol dehydrogenase; 95.7 0.016 5.4E-07 49.7 5.8 73 9-82 106-179 (450)
26 1vlj_A NADH-dependent butanol 95.7 0.028 9.5E-07 47.1 7.2 72 9-82 60-153 (407)
27 3jzd_A Iron-containing alcohol 95.3 0.011 3.8E-07 49.1 3.6 75 7-82 48-123 (358)
28 3okf_A 3-dehydroquinate syntha 95.1 0.056 1.9E-06 45.8 7.2 73 9-81 77-158 (390)
29 1mjh_A Protein (ATP-binding do 94.3 0.34 1.2E-05 33.8 8.7 69 10-82 85-161 (162)
30 3qbe_A 3-dehydroquinate syntha 94.1 0.11 3.9E-06 43.5 6.8 73 9-81 57-138 (368)
31 3iv7_A Alcohol dehydrogenase I 94.0 0.044 1.5E-06 45.7 4.0 53 30-82 69-122 (364)
32 1xah_A Sadhqs, 3-dehydroquinat 93.7 0.1 3.5E-06 42.7 5.7 72 9-82 46-126 (354)
33 1tq8_A Hypothetical protein RV 93.6 0.76 2.6E-05 32.7 9.7 71 8-82 81-160 (163)
34 3m9w_A D-xylose-binding peripl 93.5 1.9 6.6E-05 32.9 14.5 72 7-80 18-91 (313)
35 3lft_A Uncharacterized protein 93.4 0.36 1.2E-05 37.1 8.0 71 8-80 18-91 (295)
36 1oj7_A Hypothetical oxidoreduc 93.3 0.11 3.8E-06 43.3 5.3 70 9-82 67-161 (408)
37 3egc_A Putative ribose operon 93.3 1.8 6.2E-05 32.6 11.8 69 8-80 25-95 (291)
38 3s99_A Basic membrane lipoprot 92.9 2.8 9.6E-05 34.4 13.3 115 8-137 45-172 (356)
39 2gru_A 2-deoxy-scyllo-inosose 92.9 0.3 1E-05 40.3 7.4 72 9-81 49-129 (368)
40 3kke_A LACI family transcripti 92.7 1.8 6E-05 33.1 11.1 110 7-137 31-155 (303)
41 2dum_A Hypothetical protein PH 92.6 1.3 4.6E-05 30.9 9.6 69 10-82 80-158 (170)
42 3k4h_A Putative transcriptiona 92.4 2.1 7.3E-05 32.0 11.0 68 8-79 30-99 (292)
43 2qh8_A Uncharacterized protein 92.4 0.65 2.2E-05 35.8 8.3 70 8-79 24-97 (302)
44 3idf_A USP-like protein; unive 92.2 0.69 2.4E-05 31.1 7.4 65 9-79 67-138 (138)
45 3h5o_A Transcriptional regulat 92.1 3.2 0.00011 32.2 12.0 68 7-78 78-147 (339)
46 3dlo_A Universal stress protei 92.1 1.1 3.6E-05 31.6 8.5 69 8-78 78-154 (155)
47 3rf7_A Iron-containing alcohol 92.0 0.15 5E-06 42.7 4.4 68 15-82 71-161 (375)
48 3s3t_A Nucleotide-binding prot 91.9 0.58 2E-05 31.8 6.7 67 9-79 70-146 (146)
49 2iks_A DNA-binding transcripti 91.8 3.2 0.00011 31.2 11.7 112 8-137 37-162 (293)
50 2qv7_A Diacylglycerol kinase D 91.8 0.43 1.5E-05 38.4 6.8 73 7-83 41-117 (337)
51 3lkv_A Uncharacterized conserv 91.8 0.93 3.2E-05 35.5 8.6 68 11-80 27-98 (302)
52 3loq_A Universal stress protei 91.6 2.1 7.4E-05 32.7 10.4 73 6-82 212-292 (294)
53 3l49_A ABC sugar (ribose) tran 91.5 3.3 0.00011 30.9 12.3 70 8-79 22-93 (291)
54 2gm3_A Unknown protein; AT3G01 91.5 1.1 3.9E-05 31.5 8.2 69 10-82 89-165 (175)
55 3bbl_A Regulatory protein of L 91.3 1.8 6.2E-05 32.6 9.6 69 7-79 24-94 (287)
56 1ujn_A Dehydroquinate synthase 91.2 0.23 7.8E-06 40.8 4.7 69 9-81 42-119 (348)
57 3hcw_A Maltose operon transcri 91.2 1.6 5.4E-05 33.2 9.2 68 8-79 29-98 (295)
58 3huu_A Transcription regulator 91.0 2.9 0.0001 31.8 10.6 68 8-79 44-113 (305)
59 2rgy_A Transcriptional regulat 91.0 3.2 0.00011 31.3 10.7 68 8-79 25-97 (290)
60 1kq3_A Glycerol dehydrogenase; 91.0 0.051 1.8E-06 44.8 0.5 58 24-82 70-128 (376)
61 3k9c_A Transcriptional regulat 90.9 3.3 0.00011 31.3 10.8 67 8-79 28-95 (289)
62 3dbi_A Sugar-binding transcrip 90.9 3.4 0.00012 32.0 11.0 69 8-79 80-150 (338)
63 3o74_A Fructose transport syst 90.7 3.8 0.00013 30.1 12.0 69 8-79 19-89 (272)
64 3gv0_A Transcriptional regulat 90.7 2.6 9E-05 31.7 10.0 68 8-79 27-96 (288)
65 2h3h_A Sugar ABC transporter, 90.5 4.6 0.00016 30.8 13.0 70 8-79 17-89 (313)
66 3miz_A Putative transcriptiona 90.4 1.3 4.4E-05 33.6 8.0 66 8-78 31-98 (301)
67 3msz_A Glutaredoxin 1; alpha-b 90.4 0.34 1.2E-05 30.4 4.0 39 5-43 12-50 (89)
68 3rot_A ABC sugar transporter, 90.1 4.9 0.00017 30.3 13.5 71 8-80 20-94 (297)
69 3fg9_A Protein of universal st 90.0 2.5 8.5E-05 29.1 8.6 68 9-79 80-156 (156)
70 2qu7_A Putative transcriptiona 89.9 4.1 0.00014 30.5 10.4 66 8-79 24-91 (288)
71 3qk7_A Transcriptional regulat 89.7 3.6 0.00012 31.1 10.1 110 8-137 27-150 (294)
72 3h8q_A Thioredoxin reductase 3 89.7 0.82 2.8E-05 31.0 5.8 68 4-95 24-92 (114)
73 1dbq_A Purine repressor; trans 89.5 4.4 0.00015 30.2 10.2 70 8-79 24-94 (289)
74 1qpz_A PURA, protein (purine n 89.4 5 0.00017 31.1 10.9 69 8-78 75-144 (340)
75 3c3k_A Alanine racemase; struc 89.4 3.8 0.00013 30.8 9.9 66 8-78 25-92 (285)
76 3brq_A HTH-type transcriptiona 89.4 5.2 0.00018 29.7 11.3 68 8-79 38-108 (296)
77 3g1w_A Sugar ABC transporter; 89.3 5.7 0.00019 29.9 13.5 71 8-80 21-94 (305)
78 3d8u_A PURR transcriptional re 89.0 4.7 0.00016 29.8 10.1 67 8-78 20-88 (275)
79 3ksm_A ABC-type sugar transpor 89.0 4.3 0.00015 29.9 9.8 71 8-80 17-92 (276)
80 3clh_A 3-dehydroquinate syntha 88.8 0.36 1.2E-05 39.5 4.0 51 31-81 64-120 (343)
81 2o20_A Catabolite control prot 88.6 7.1 0.00024 30.1 11.4 68 8-79 80-149 (332)
82 3tb6_A Arabinose metabolism tr 88.3 6.3 0.00022 29.3 11.5 70 8-79 32-106 (298)
83 3o1i_D Periplasmic protein TOR 88.2 6.1 0.00021 29.5 10.3 69 8-78 22-93 (304)
84 3e3m_A Transcriptional regulat 88.1 5.7 0.0002 31.0 10.5 67 8-78 87-155 (355)
85 2z08_A Universal stress protei 87.7 2.4 8.1E-05 28.5 7.1 65 11-79 60-137 (137)
86 3bil_A Probable LACI-family tr 87.6 5 0.00017 31.4 9.9 68 8-79 83-152 (348)
87 1tjy_A Sugar transport protein 87.4 3.5 0.00012 31.8 8.7 69 9-79 21-92 (316)
88 1aba_A Glutaredoxin; electron 87.2 2 6.8E-05 27.4 6.1 37 6-42 13-52 (87)
89 3tnj_A Universal stress protei 86.7 2.9 9.8E-05 28.4 7.1 62 16-81 79-148 (150)
90 3clk_A Transcription regulator 86.6 5.1 0.00018 30.0 9.1 68 8-79 25-95 (290)
91 2fqx_A Membrane lipoprotein TM 86.5 10 0.00035 29.6 11.5 68 8-78 24-92 (318)
92 2fn9_A Ribose ABC transporter, 86.1 8.7 0.0003 28.6 13.4 70 8-79 19-90 (290)
93 3jvd_A Transcriptional regulat 86.0 4.4 0.00015 31.5 8.7 62 8-78 81-142 (333)
94 2fep_A Catabolite control prot 85.9 8.5 0.00029 28.9 10.0 68 8-79 33-102 (289)
95 3jy6_A Transcriptional regulat 85.8 9 0.00031 28.4 11.6 67 8-79 24-92 (276)
96 3s40_A Diacylglycerol kinase; 85.8 2.8 9.6E-05 33.2 7.5 72 7-83 25-100 (304)
97 3hgm_A Universal stress protei 85.5 3.9 0.00013 27.4 7.2 65 9-77 71-146 (147)
98 2rjo_A Twin-arginine transloca 85.4 11 0.00037 29.0 12.1 71 8-80 22-96 (332)
99 3mt0_A Uncharacterized protein 85.3 5.2 0.00018 30.5 8.6 72 7-81 50-129 (290)
100 3ctp_A Periplasmic binding pro 85.2 11 0.00038 29.0 11.1 65 8-78 77-141 (330)
101 2dri_A D-ribose-binding protei 85.2 9.7 0.00033 28.3 13.6 69 8-78 18-88 (271)
102 3olq_A Universal stress protei 84.6 3.6 0.00012 31.6 7.4 69 11-82 76-152 (319)
103 3gbv_A Putative LACI-family tr 84.5 11 0.00036 28.1 13.2 73 8-80 26-102 (304)
104 3brs_A Periplasmic binding pro 84.3 11 0.00036 28.0 13.4 70 8-79 24-97 (289)
105 2fvy_A D-galactose-binding per 83.6 7.7 0.00026 29.0 8.8 72 8-80 19-92 (309)
106 3kjx_A Transcriptional regulat 83.4 8.2 0.00028 29.9 9.2 67 8-78 85-153 (344)
107 1q77_A Hypothetical protein AQ 83.4 4.5 0.00015 27.0 6.7 52 23-79 87-138 (138)
108 3hs3_A Ribose operon repressor 83.2 10 0.00035 28.3 9.3 65 8-79 27-92 (277)
109 1jx6_A LUXP protein; protein-l 82.8 14 0.00048 28.3 11.7 70 8-78 61-134 (342)
110 1gud_A ALBP, D-allose-binding 82.6 7.7 0.00026 29.2 8.5 69 8-78 18-90 (288)
111 1jmv_A USPA, universal stress 81.6 9.3 0.00032 25.4 7.9 62 15-81 71-139 (141)
112 2x7x_A Sensor protein; transfe 81.3 16 0.00055 27.9 11.8 69 9-79 23-94 (325)
113 2vk2_A YTFQ, ABC transporter p 81.0 11 0.00037 28.5 8.8 69 9-79 20-90 (306)
114 3ab8_A Putative uncharacterize 81.0 13 0.00046 27.6 9.3 67 10-82 76-151 (268)
115 2bon_A Lipid kinase; DAG kinas 81.0 4.4 0.00015 32.5 6.8 73 8-84 44-122 (332)
116 3fdx_A Putative filament prote 80.9 10 0.00034 25.3 8.1 65 11-79 69-143 (143)
117 8abp_A L-arabinose-binding pro 80.9 15 0.00052 27.4 11.5 69 8-79 19-89 (306)
118 2l2q_A PTS system, cellobiose- 80.5 5.4 0.00019 27.1 6.3 65 8-81 19-85 (109)
119 3l6u_A ABC-type sugar transpor 80.2 16 0.00054 27.1 13.4 70 8-79 25-96 (293)
120 1x60_A Sporulation-specific N- 79.6 3.9 0.00013 25.9 5.0 54 1-55 14-76 (79)
121 3l4n_A Monothiol glutaredoxin- 79.4 2.5 8.5E-05 29.9 4.4 68 4-95 21-92 (127)
122 3gi1_A LBP, laminin-binding pr 79.3 10 0.00035 30.0 8.5 77 17-94 193-274 (286)
123 2lqo_A Putative glutaredoxin R 79.1 2.4 8.2E-05 28.3 4.0 38 4-43 11-48 (92)
124 1byk_A Protein (trehalose oper 79.1 16 0.00055 26.6 9.7 67 8-78 19-85 (255)
125 3ic4_A Glutaredoxin (GRX-1); s 78.7 5.1 0.00017 25.2 5.4 26 5-30 20-45 (92)
126 2hsg_A Glucose-resistance amyl 78.3 12 0.0004 28.8 8.4 68 8-79 77-146 (332)
127 1f0k_A MURG, UDP-N-acetylgluco 78.0 13 0.00043 28.5 8.4 73 50-134 255-332 (364)
128 1fov_A Glutaredoxin 3, GRX3; a 77.5 8.7 0.0003 23.2 6.1 38 5-44 9-46 (82)
129 3gyb_A Transcriptional regulat 77.2 5.1 0.00017 29.8 5.8 66 7-79 21-86 (280)
130 1nvm_A HOA, 4-hydroxy-2-oxoval 77.0 4 0.00014 33.2 5.5 63 4-67 116-180 (345)
131 2ioy_A Periplasmic sugar-bindi 76.8 21 0.00071 26.6 13.8 69 8-78 18-88 (283)
132 1uta_A FTSN, MSGA, cell divisi 76.7 5.2 0.00018 25.6 5.0 51 1-52 14-73 (81)
133 1f76_A Dihydroorotate dehydrog 75.8 10 0.00035 30.2 7.6 37 21-58 211-247 (336)
134 3g85_A Transcriptional regulat 75.7 2.7 9.3E-05 31.4 3.9 69 8-79 29-98 (289)
135 3ab8_A Putative uncharacterize 75.7 12 0.00042 27.8 7.6 66 8-79 199-268 (268)
136 3mt0_A Uncharacterized protein 75.6 11 0.00039 28.5 7.5 65 13-81 204-277 (290)
137 1jye_A Lactose operon represso 75.3 20 0.00068 27.8 9.0 68 8-78 78-148 (349)
138 1e2b_A Enzyme IIB-cellobiose; 75.0 12 0.00042 25.4 6.9 55 3-68 15-69 (106)
139 3s81_A Putative aspartate race 75.0 3.1 0.00011 33.0 4.2 76 1-79 35-129 (268)
140 2h0a_A TTHA0807, transcription 74.9 22 0.00074 26.1 8.7 67 8-78 16-84 (276)
141 3zyw_A Glutaredoxin-3; metal b 74.4 8.5 0.00029 26.1 5.9 64 5-95 29-93 (111)
142 3olq_A Universal stress protei 74.4 20 0.00067 27.3 8.6 66 13-82 233-307 (319)
143 3cis_A Uncharacterized protein 74.3 16 0.00055 27.9 8.1 68 9-82 83-163 (309)
144 3loq_A Universal stress protei 74.1 6.4 0.00022 30.0 5.7 69 9-82 87-164 (294)
145 1pfk_A Phosphofructokinase; tr 73.9 2.5 8.7E-05 34.8 3.5 49 34-82 79-127 (320)
146 3qmx_A Glutaredoxin A, glutare 73.8 10 0.00034 25.1 6.0 65 5-95 24-89 (99)
147 3ipz_A Monothiol glutaredoxin- 73.7 9.1 0.00031 25.6 5.8 63 6-95 32-95 (109)
148 4a3s_A 6-phosphofructokinase; 73.6 2.7 9.1E-05 34.5 3.6 48 35-82 79-126 (319)
149 1zxx_A 6-phosphofructokinase; 73.5 2.8 9.6E-05 34.5 3.7 48 34-81 78-125 (319)
150 3d02_A Putative LACI-type tran 72.8 27 0.00091 26.0 11.1 69 8-78 21-92 (303)
151 3uug_A Multiple sugar-binding 72.0 29 0.001 26.1 12.6 71 8-80 20-92 (330)
152 2khp_A Glutaredoxin; thioredox 71.8 12 0.00042 23.3 5.9 36 6-43 15-50 (92)
153 2hqb_A Transcriptional activat 71.1 9.2 0.00031 29.5 6.0 48 8-57 24-71 (296)
154 1efp_B ETF, protein (electron 70.2 19 0.00065 28.2 7.8 68 11-78 69-146 (252)
155 2kpo_A Rossmann 2X2 fold prote 69.3 20 0.00068 24.6 6.7 50 4-58 9-60 (110)
156 1efv_B Electron transfer flavo 68.9 23 0.0008 27.8 8.0 69 10-78 71-149 (255)
157 2wem_A Glutaredoxin-related pr 68.4 15 0.00051 25.3 6.1 63 6-95 34-98 (118)
158 2wci_A Glutaredoxin-4; redox-a 67.1 13 0.00043 26.4 5.6 63 6-95 49-112 (135)
159 4gqr_A Pancreatic alpha-amylas 66.5 2.7 9.4E-05 34.1 2.2 48 8-55 23-96 (496)
160 3rhb_A ATGRXC5, glutaredoxin-C 65.8 11 0.00037 24.8 4.8 28 5-32 27-54 (113)
161 1o97_C Electron transferring f 65.8 26 0.00089 27.6 7.7 68 11-78 70-145 (264)
162 3h75_A Periplasmic sugar-bindi 65.6 44 0.0015 25.7 12.1 70 8-80 21-94 (350)
163 3qvl_A Putative hydantoin race 64.7 26 0.0009 27.1 7.5 67 11-78 17-97 (245)
164 4hoj_A REGF protein; GST, glut 64.1 10 0.00035 27.3 4.7 32 8-39 13-44 (210)
165 3e61_A Putative transcriptiona 63.7 21 0.00072 26.2 6.5 67 8-80 25-94 (277)
166 1wik_A Thioredoxin-like protei 63.2 12 0.00042 24.7 4.7 35 5-41 28-62 (109)
167 2wul_A Glutaredoxin related pr 62.4 22 0.00075 24.9 6.1 33 8-43 36-69 (118)
168 3fst_A 5,10-methylenetetrahydr 62.2 34 0.0012 27.6 8.0 50 10-59 71-120 (304)
169 1g2h_A Transcriptional regulat 62.2 3.6 0.00012 25.3 1.7 21 116-136 38-58 (61)
170 2klx_A Glutaredoxin; thioredox 62.1 8.8 0.0003 24.0 3.6 21 7-27 16-36 (89)
171 3cx3_A Lipoprotein; zinc-bindi 61.7 43 0.0015 26.1 8.3 64 17-81 191-258 (284)
172 3gx8_A Monothiol glutaredoxin- 61.7 16 0.00055 25.1 5.2 63 6-95 30-96 (121)
173 4hi7_A GI20122; GST, glutathio 61.4 15 0.00053 26.6 5.3 36 8-43 13-48 (228)
174 2i2c_A Probable inorganic poly 61.3 7.3 0.00025 30.5 3.7 53 7-81 14-70 (272)
175 2yan_A Glutaredoxin-3; oxidore 60.8 20 0.00067 23.4 5.3 26 5-30 30-55 (105)
176 2vo9_A EAD500, L-alanyl-D-glut 60.6 7 0.00024 29.4 3.3 54 12-67 43-97 (179)
177 3nzn_A Glutaredoxin; structura 60.4 15 0.0005 23.9 4.6 26 5-30 30-55 (103)
178 2o6l_A UDP-glucuronosyltransfe 60.3 38 0.0013 23.2 7.6 119 6-137 36-166 (170)
179 1nm3_A Protein HI0572; hybrid, 60.2 15 0.00052 27.3 5.2 28 5-32 178-205 (241)
180 2dgd_A 223AA long hypothetical 59.9 37 0.0012 25.2 7.3 44 6-53 93-137 (223)
181 3p6l_A Sugar phosphate isomera 59.8 36 0.0012 25.1 7.3 54 6-59 61-114 (262)
182 2prs_A High-affinity zinc upta 58.6 24 0.00081 27.6 6.3 61 17-78 188-252 (284)
183 2kok_A Arsenate reductase; bru 58.2 10 0.00036 25.9 3.7 37 8-44 16-53 (120)
184 1t1v_A SH3BGRL3, SH3 domain-bi 57.9 13 0.00045 23.7 4.0 60 11-95 22-82 (93)
185 3dzc_A UDP-N-acetylglucosamine 56.9 6.7 0.00023 31.9 2.9 66 13-78 68-141 (396)
186 2qjg_A Putative aldolase MJ040 55.9 64 0.0022 24.4 8.6 68 9-78 133-208 (273)
187 3hno_A Pyrophosphate-dependent 55.8 12 0.00039 32.0 4.2 49 33-82 88-143 (419)
188 2f48_A Diphosphate--fructose-6 55.8 8.1 0.00028 34.2 3.3 48 34-81 151-204 (555)
189 3b0p_A TRNA-dihydrouridine syn 55.4 61 0.0021 26.2 8.4 53 6-58 110-166 (350)
190 3vk9_A Glutathione S-transfera 55.2 20 0.00068 25.9 5.0 36 8-43 12-47 (216)
191 2dxa_A Protein YBAK; trans-edi 54.7 6.4 0.00022 28.4 2.2 53 4-56 2-58 (166)
192 3e7l_A Transcriptional regulat 54.5 6 0.0002 24.3 1.7 21 116-136 37-57 (63)
193 3rdw_A Putative arsenate reduc 54.3 13 0.00044 25.8 3.6 39 7-45 15-54 (121)
194 2nx9_A Oxaloacetate decarboxyl 54.1 36 0.0012 29.2 7.1 66 2-67 121-189 (464)
195 3f0i_A Arsenate reductase; str 54.0 12 0.0004 25.9 3.4 39 7-45 14-53 (119)
196 3gkx_A Putative ARSC family re 53.8 15 0.00053 25.3 4.0 39 7-45 14-53 (120)
197 3gr7_A NADPH dehydrogenase; fl 53.4 60 0.0021 26.2 8.1 40 20-59 208-252 (340)
198 3f6d_A Adgstd4-4, glutathione 53.3 26 0.00089 25.0 5.3 36 7-42 9-44 (219)
199 1ntc_A Protein (nitrogen regul 53.1 8.5 0.00029 25.3 2.4 22 116-137 69-90 (91)
200 2xed_A Putative maleate isomer 52.8 54 0.0019 25.5 7.5 42 35-76 193-237 (273)
201 1xp2_A EAD500, PLY500, L-alany 52.7 13 0.00045 28.4 3.7 55 10-66 41-96 (179)
202 1umq_A Photosynthetic apparatu 52.7 4.6 0.00016 26.8 1.0 21 116-136 59-79 (81)
203 1z3e_A Regulatory protein SPX; 52.5 24 0.00081 24.4 4.8 38 6-43 10-48 (132)
204 3fz4_A Putative arsenate reduc 52.5 17 0.00057 25.1 4.0 38 7-44 13-51 (120)
205 1tvm_A PTS system, galactitol- 52.0 35 0.0012 23.2 5.6 43 9-60 38-80 (113)
206 2ct6_A SH3 domain-binding glut 51.7 31 0.0011 23.0 5.2 67 10-95 27-94 (111)
207 3czc_A RMPB; alpha/beta sandwi 51.7 52 0.0018 22.1 6.6 57 10-79 36-93 (110)
208 1jfl_A Aspartate racemase; alp 51.6 7.1 0.00024 29.4 2.1 75 1-78 10-103 (228)
209 2q5c_A NTRC family transcripti 51.3 34 0.0012 25.5 5.8 56 13-76 109-164 (196)
210 1rw1_A Conserved hypothetical 50.7 14 0.00049 24.9 3.4 39 6-44 9-48 (114)
211 3bby_A Uncharacterized GST-lik 50.6 23 0.00078 25.3 4.6 26 7-32 17-42 (215)
212 2x8g_A Thioredoxin glutathione 50.4 37 0.0013 28.8 6.6 24 5-28 26-49 (598)
213 1eto_A FIS, factor for inversi 50.2 7.2 0.00025 26.5 1.7 21 116-136 76-96 (98)
214 3hh8_A Metal ABC transporter s 50.0 92 0.0031 24.5 8.5 61 17-78 197-261 (294)
215 3ipc_A ABC transporter, substr 49.7 67 0.0023 24.3 7.4 58 20-77 40-98 (356)
216 3nsx_A Alpha-glucosidase; stru 49.6 48 0.0016 29.5 7.4 52 4-56 174-238 (666)
217 1wdv_A Hypothetical protein AP 49.4 15 0.00052 25.6 3.4 47 10-56 2-49 (152)
218 1v95_A Nuclear receptor coacti 49.1 29 0.00098 25.0 4.9 54 3-59 17-70 (130)
219 3cis_A Uncharacterized protein 48.9 72 0.0025 24.1 7.5 55 21-81 245-307 (309)
220 2cq9_A GLRX2 protein, glutared 48.3 38 0.0013 23.0 5.3 25 8-32 38-62 (130)
221 1usg_A Leucine-specific bindin 47.9 57 0.002 24.5 6.7 70 9-78 22-99 (346)
222 3s2u_A UDP-N-acetylglucosamine 47.8 89 0.003 24.7 8.1 108 11-134 224-333 (365)
223 1m3s_A Hypothetical protein YC 47.8 70 0.0024 22.5 7.8 73 5-82 47-134 (186)
224 1rqb_A Transcarboxylase 5S sub 47.4 66 0.0022 28.2 7.8 67 2-68 138-207 (539)
225 1r7h_A NRDH-redoxin; thioredox 47.4 40 0.0014 19.6 5.6 21 7-27 11-31 (75)
226 4f2d_A L-arabinose isomerase; 47.2 1.4E+02 0.0047 25.7 12.0 71 9-79 30-104 (500)
227 2pju_A Propionate catabolism o 47.0 44 0.0015 25.7 6.0 59 11-77 119-177 (225)
228 3ot5_A UDP-N-acetylglucosamine 46.9 11 0.00036 30.9 2.5 67 13-79 71-145 (403)
229 2ftp_A Hydroxymethylglutaryl-C 46.9 59 0.002 25.6 6.9 49 8-56 124-179 (302)
230 2l69_A Rossmann 2X3 fold prote 46.6 43 0.0015 23.7 5.3 47 5-53 59-105 (134)
231 1u0t_A Inorganic polyphosphate 46.5 16 0.00054 29.0 3.5 75 6-81 18-108 (307)
232 1v2a_A Glutathione transferase 46.5 35 0.0012 24.1 5.1 35 8-43 10-44 (210)
233 1jeo_A MJ1247, hypothetical pr 46.4 72 0.0025 22.3 7.6 73 2-80 47-134 (180)
234 1w0m_A TIM, triosephosphate is 46.2 42 0.0014 26.0 5.8 65 14-81 78-143 (226)
235 1pn9_A GST class-delta, glutat 46.1 34 0.0012 24.3 5.0 25 8-32 10-34 (209)
236 3vln_A GSTO-1, glutathione S-t 45.8 28 0.00095 25.4 4.5 32 7-38 32-63 (241)
237 3l4y_A Maltase-glucoamylase, i 45.8 53 0.0018 30.4 7.2 52 4-56 301-365 (875)
238 1b73_A Glutamate racemase; iso 45.6 12 0.00042 28.8 2.6 41 37-78 50-92 (254)
239 3l78_A Regulatory protein SPX; 45.2 19 0.00066 24.6 3.4 38 6-43 9-47 (120)
240 3zwt_A Dihydroorotate dehydrog 45.1 90 0.0031 25.6 8.0 37 20-57 219-255 (367)
241 3pzy_A MOG; ssgcid, seattle st 44.9 38 0.0013 24.6 5.1 58 12-72 31-93 (164)
242 3hut_A Putative branched-chain 44.2 66 0.0022 24.4 6.6 58 21-78 43-102 (358)
243 2v6k_A Maleylpyruvate isomeras 44.1 45 0.0015 23.5 5.3 26 7-32 11-36 (214)
244 3qav_A RHO-class glutathione S 44.1 43 0.0015 24.6 5.4 36 7-42 35-70 (243)
245 3gx0_A GST-like protein YFCG; 43.7 32 0.0011 24.4 4.5 36 7-42 9-44 (215)
246 1zuw_A Glutamate racemase 1; ( 43.7 9.9 0.00034 29.8 1.8 45 33-78 45-96 (272)
247 1u6t_A SH3 domain-binding glut 43.7 74 0.0025 22.3 6.3 35 9-45 18-52 (121)
248 1pea_A Amidase operon; gene re 43.4 85 0.0029 24.3 7.3 69 10-78 28-105 (385)
249 2gzm_A Glutamate racemase; enz 43.2 9.8 0.00034 29.6 1.7 47 33-79 45-96 (267)
250 3kht_A Response regulator; PSI 43.1 66 0.0022 20.8 6.5 50 4-59 12-61 (144)
251 2cw6_A Hydroxymethylglutaryl-C 43.0 58 0.002 25.6 6.3 49 8-56 121-176 (298)
252 3ojc_A Putative aspartate/glut 43.0 15 0.00053 28.0 2.8 41 38-79 65-106 (231)
253 2jfq_A Glutamate racemase; cel 42.8 9.7 0.00033 30.1 1.6 71 6-79 34-115 (286)
254 1e6b_A Glutathione S-transfera 42.6 46 0.0016 23.7 5.3 47 8-54 18-64 (221)
255 3kl9_A PEPA, glutamyl aminopep 42.4 55 0.0019 26.6 6.2 47 71-132 306-352 (355)
256 4glt_A Glutathione S-transfera 42.2 12 0.00042 27.4 2.0 29 8-36 32-60 (225)
257 1ydn_A Hydroxymethylglutaryl-C 42.0 48 0.0016 25.8 5.6 51 6-56 118-175 (295)
258 3n5o_A Glutathione transferase 42.0 57 0.0019 23.5 5.7 50 7-56 18-67 (235)
259 3lpp_A Sucrase-isomaltase; gly 41.8 67 0.0023 29.8 7.3 52 4-56 329-393 (898)
260 3r8r_A Transaldolase; pentose 41.7 54 0.0019 25.3 5.8 42 7-53 142-183 (212)
261 3ble_A Citramalate synthase fr 41.7 26 0.00089 28.4 4.1 60 8-67 137-200 (337)
262 2hig_A 6-phospho-1-fructokinas 41.7 12 0.00043 32.5 2.3 49 33-82 173-228 (487)
263 2pjk_A 178AA long hypothetical 41.1 81 0.0028 23.1 6.5 60 12-73 44-109 (178)
264 2c3n_A Glutathione S-transfera 41.0 44 0.0015 24.7 5.0 48 7-54 18-65 (247)
265 1toa_A Tromp-1, protein (perip 41.0 1.3E+02 0.0046 23.8 8.9 60 17-77 211-279 (313)
266 4hz2_A Glutathione S-transfera 41.0 46 0.0016 24.2 5.0 26 7-32 31-56 (230)
267 2g3m_A Maltase, alpha-glucosid 40.8 94 0.0032 27.7 7.9 51 5-56 187-250 (693)
268 1hg3_A Triosephosphate isomera 40.7 43 0.0015 25.9 5.1 65 14-81 81-146 (225)
269 1mkz_A Molybdenum cofactor bio 40.7 87 0.003 22.7 6.5 62 13-76 33-100 (172)
270 3m3m_A Glutathione S-transfera 40.5 32 0.0011 24.3 4.0 26 7-32 12-37 (210)
271 3h5t_A Transcriptional regulat 40.3 1E+02 0.0035 23.8 7.3 55 23-79 101-158 (366)
272 3ay8_A Glutathione S-transfera 40.2 37 0.0013 24.3 4.3 25 8-32 13-37 (216)
273 3qay_A Endolysin; amidase A/B 40.1 78 0.0027 23.2 6.2 48 7-57 32-85 (180)
274 4fle_A Esterase; structural ge 40.0 88 0.003 21.4 6.6 78 3-80 13-92 (202)
275 3apt_A Methylenetetrahydrofola 39.6 1E+02 0.0035 24.6 7.3 57 2-60 54-110 (310)
276 3m0f_A Uncharacterized protein 39.5 32 0.0011 24.4 3.9 28 7-34 11-38 (213)
277 2vvt_A Glutamate racemase; iso 39.5 12 0.00041 29.7 1.7 71 6-79 36-117 (290)
278 3ein_A GST class-theta, glutat 39.3 33 0.0011 24.2 3.9 36 7-42 10-45 (209)
279 4ikh_A Glutathione S-transfera 39.3 32 0.0011 25.1 4.0 35 8-42 31-65 (244)
280 3tov_A Glycosyl transferase fa 39.2 28 0.00096 27.7 3.9 68 1-82 223-290 (349)
281 2an1_A Putative kinase; struct 39.2 54 0.0018 25.3 5.5 72 7-80 20-95 (292)
282 3rbt_A Glutathione transferase 39.0 44 0.0015 24.6 4.7 33 7-39 35-67 (246)
283 2ahe_A Chloride intracellular 38.9 49 0.0017 25.1 5.1 32 6-37 34-65 (267)
284 3out_A Glutamate racemase; str 38.8 15 0.00051 29.0 2.2 46 33-78 49-100 (268)
285 2ht9_A Glutaredoxin-2; thiored 38.6 63 0.0022 22.7 5.3 23 7-29 59-81 (146)
286 3ujp_A Mn transporter subunit; 38.5 1.2E+02 0.0042 24.1 7.6 60 17-77 204-267 (307)
287 2cz2_A Maleylacetoacetate isom 38.3 51 0.0018 23.6 4.9 25 8-32 22-46 (223)
288 3m8n_A Possible glutathione S- 38.2 30 0.001 25.0 3.6 26 7-32 12-37 (225)
289 1yix_A Deoxyribonuclease YCFH; 38.0 81 0.0028 23.2 6.1 46 6-54 109-154 (265)
290 1axd_A Glutathione S-transfera 37.7 23 0.0008 24.9 2.9 35 8-42 12-46 (209)
291 4iel_A Glutathione S-transfera 37.6 26 0.00089 25.5 3.2 27 6-32 31-57 (229)
292 3fy7_A Chloride intracellular 37.5 30 0.001 25.8 3.6 30 3-32 38-67 (250)
293 2c2x_A Methylenetetrahydrofola 37.4 41 0.0014 27.2 4.6 47 10-63 171-217 (281)
294 2imi_A Epsilon-class glutathio 37.3 40 0.0014 24.2 4.2 27 7-33 12-38 (221)
295 1jub_A Dihydroorotate dehydrog 37.2 80 0.0027 24.5 6.2 21 35-55 171-191 (311)
296 1gwc_A Glutathione S-transfera 37.2 50 0.0017 23.7 4.7 25 7-31 15-39 (230)
297 4d9b_A D-cysteine desulfhydras 37.1 35 0.0012 27.3 4.1 45 39-83 188-237 (342)
298 2zsk_A PH1733, 226AA long hypo 37.1 23 0.00079 26.5 2.9 78 1-79 10-103 (226)
299 2vs7_A I-DMOI, homing endonucl 36.8 29 0.00099 25.9 3.4 26 3-28 128-153 (199)
300 1nyt_A Shikimate 5-dehydrogena 36.8 99 0.0034 23.6 6.6 50 8-61 129-192 (271)
301 3vup_A Beta-1,4-mannanase; TIM 36.7 84 0.0029 23.0 6.0 51 6-57 40-111 (351)
302 3rfq_A Pterin-4-alpha-carbinol 36.7 83 0.0028 23.5 6.0 59 12-72 53-116 (185)
303 3lmz_A Putative sugar isomeras 36.5 1E+02 0.0035 22.6 6.5 53 6-58 59-111 (257)
304 1ep3_A Dihydroorotate dehydrog 36.5 1.1E+02 0.0037 23.5 6.8 48 6-56 148-196 (311)
305 3fxa_A SIS domain protein; str 36.4 1E+02 0.0035 22.0 6.4 50 7-56 57-126 (201)
306 3nkl_A UDP-D-quinovosamine 4-d 36.1 65 0.0022 21.5 4.9 44 35-81 54-101 (141)
307 1r5a_A Glutathione transferase 36.1 49 0.0017 23.6 4.5 26 8-33 12-37 (218)
308 3op6_A Uncharacterized protein 36.1 41 0.0014 23.7 4.0 46 10-55 4-49 (152)
309 3s1x_A Probable transaldolase; 36.0 64 0.0022 25.1 5.4 41 7-52 144-184 (223)
310 3sr3_A Microcin immunity prote 36.0 90 0.0031 25.2 6.5 68 6-77 29-113 (336)
311 3l9c_A 3-dehydroquinate dehydr 36.0 74 0.0025 25.0 5.8 96 5-106 107-234 (259)
312 2bcq_A DNA polymerase lambda; 35.7 39 0.0013 27.5 4.3 101 8-116 154-264 (335)
313 2ztj_A Homocitrate synthase; ( 35.5 75 0.0026 26.1 6.0 60 7-67 113-175 (382)
314 2f5t_X Archaeal transcriptiona 35.5 1E+02 0.0036 23.7 6.5 54 5-60 7-60 (233)
315 4ba0_A Alpha-glucosidase, puta 35.5 95 0.0032 28.4 7.1 51 5-56 274-342 (817)
316 1k0d_A URE2 protein; nitrate a 35.4 50 0.0017 24.5 4.6 35 8-42 29-63 (260)
317 3lxz_A Glutathione S-transfera 34.9 48 0.0016 23.8 4.3 29 7-35 11-39 (229)
318 3uhf_A Glutamate racemase; str 34.8 17 0.00058 29.0 1.9 47 32-79 65-117 (274)
319 3ctg_A Glutaredoxin-2; reduced 34.5 80 0.0027 21.5 5.2 24 7-30 47-74 (129)
320 3lyp_A Stringent starvation pr 34.4 52 0.0018 23.4 4.4 24 8-31 18-41 (215)
321 1k0m_A CLIC1, NCC27, chloride 34.3 64 0.0022 23.8 5.0 26 6-31 23-48 (241)
322 1kte_A Thioltransferase; redox 34.3 86 0.0029 19.6 6.0 22 6-27 21-45 (105)
323 1vki_A Hypothetical protein AT 34.3 39 0.0013 24.8 3.7 48 9-56 20-67 (181)
324 2oho_A Glutamate racemase; iso 34.1 17 0.00059 28.3 1.8 72 6-79 24-105 (273)
325 3lyk_A Stringent starvation pr 34.0 60 0.0021 23.1 4.7 25 7-31 15-39 (216)
326 1oyj_A Glutathione S-transfera 34.0 59 0.002 23.5 4.7 25 7-31 15-39 (231)
327 1di6_A MOGA, molybdenum cofact 33.5 1.1E+02 0.0038 22.8 6.3 57 12-70 27-91 (195)
328 2o1e_A YCDH; alpha-beta protei 33.5 36 0.0012 27.1 3.7 63 17-80 204-270 (312)
329 2gzx_A Putative TATD related D 33.3 80 0.0027 23.1 5.4 49 6-57 107-155 (265)
330 1vjf_A DNA-binding protein, pu 33.1 64 0.0022 23.5 4.7 48 10-57 16-63 (180)
331 1yy7_A SSPA, stringent starvat 33.0 70 0.0024 22.7 4.9 24 8-31 20-43 (213)
332 1ljr_A HGST T2-2, glutathione 33.0 54 0.0018 24.0 4.3 27 7-33 11-37 (244)
333 3can_A Pyruvate-formate lyase- 32.9 1.2E+02 0.0043 21.1 7.2 13 8-20 110-122 (182)
334 2e6f_A Dihydroorotate dehydrog 32.8 1.7E+02 0.0058 22.6 7.9 51 6-57 144-196 (314)
335 1s3c_A Arsenate reductase; ARS 32.6 35 0.0012 24.2 3.2 39 6-44 11-50 (141)
336 2l82_A Designed protein OR32; 32.3 1.4E+02 0.0049 21.5 6.6 48 4-53 9-56 (162)
337 3niv_A Glutathione S-transfera 32.3 48 0.0016 23.7 3.9 27 7-33 11-37 (222)
338 1aw9_A Glutathione S-transfera 32.2 37 0.0013 24.0 3.3 24 8-31 12-35 (216)
339 1lwj_A 4-alpha-glucanotransfer 32.0 1E+02 0.0034 25.1 6.2 51 5-55 20-89 (441)
340 1k66_A Phytochrome response re 31.9 1E+02 0.0034 19.7 5.5 53 4-59 13-72 (149)
341 2r4v_A XAP121, chloride intrac 31.9 46 0.0016 24.6 3.9 26 6-31 29-54 (247)
342 2eq5_A 228AA long hypothetical 31.9 66 0.0022 23.7 4.7 36 42-78 68-103 (228)
343 2z1k_A (NEO)pullulanase; hydro 31.9 1E+02 0.0036 25.2 6.3 52 5-56 47-117 (475)
344 3ahc_A Phosphoketolase, xylulo 31.9 1.9E+02 0.0065 26.9 8.5 113 10-136 675-801 (845)
345 1j6o_A TATD-related deoxyribon 31.8 1.1E+02 0.0036 23.1 6.0 46 6-54 118-163 (268)
346 1yx1_A Hypothetical protein PA 31.7 1.1E+02 0.0038 22.5 6.0 51 9-59 52-107 (264)
347 2dwu_A Glutamate racemase; iso 31.7 19 0.00064 28.2 1.6 70 6-78 19-99 (276)
348 3lvu_A ABC transporter, peripl 31.6 97 0.0033 22.8 5.6 46 6-58 141-186 (258)
349 3fkq_A NTRC-like two-domain pr 31.5 1E+02 0.0035 24.6 6.1 54 4-63 28-82 (373)
350 3tva_A Xylose isomerase domain 31.5 1.5E+02 0.0052 21.9 6.8 54 6-59 49-125 (290)
351 1lxn_A Hypothetical protein MT 31.5 41 0.0014 22.7 3.2 43 3-45 15-60 (99)
352 1k68_A Phytochrome response re 31.4 98 0.0034 19.4 5.9 54 4-60 9-66 (140)
353 3ist_A Glutamate racemase; str 31.3 28 0.00097 27.4 2.6 69 7-78 18-97 (269)
354 3cbu_A Probable GST-related pr 31.2 53 0.0018 23.1 3.9 28 8-35 12-40 (214)
355 4ecj_A Glutathione S-transfera 31.2 56 0.0019 24.0 4.2 36 7-42 11-46 (244)
356 3r2q_A Uncharacterized GST-lik 31.2 46 0.0016 23.1 3.6 29 7-35 9-38 (202)
357 3p2o_A Bifunctional protein fo 31.0 61 0.0021 26.2 4.6 43 11-62 174-216 (285)
358 3iwt_A 178AA long hypothetical 31.0 1.2E+02 0.004 21.7 5.8 49 12-62 44-94 (178)
359 3top_A Maltase-glucoamylase, i 30.8 89 0.003 29.2 6.2 52 4-56 302-365 (908)
360 2wte_A CSA3; antiviral protein 30.8 1.5E+02 0.0052 22.8 6.8 64 7-71 50-117 (244)
361 2g2c_A Putative molybdenum cof 30.8 80 0.0027 22.7 4.9 52 17-70 38-94 (167)
362 2b99_A Riboflavin synthase; lu 30.7 79 0.0027 23.4 4.9 99 10-123 18-132 (156)
363 4f03_A Glutathione transferase 30.7 47 0.0016 23.9 3.6 24 8-31 23-46 (253)
364 1ydo_A HMG-COA lyase; TIM-barr 30.7 1.1E+02 0.0036 24.4 6.0 60 8-67 122-188 (307)
365 3bg3_A Pyruvate carboxylase, m 30.6 1.1E+02 0.0037 27.7 6.6 66 2-67 218-292 (718)
366 2vsy_A XCC0866; transferase, g 30.4 1.6E+02 0.0054 24.0 7.2 66 10-81 419-485 (568)
367 3l07_A Bifunctional protein fo 30.4 64 0.0022 26.0 4.7 44 10-62 174-217 (285)
368 2jfz_A Glutamate racemase; cel 30.4 20 0.00067 27.6 1.5 45 33-78 42-92 (255)
369 3ubk_A Glutathione transferase 30.3 48 0.0016 24.3 3.7 29 7-35 12-40 (242)
370 4eys_A MCCC family protein; MC 30.2 1.6E+02 0.0055 23.8 7.1 55 6-62 23-86 (346)
371 1lxj_A YBL001C, hypothetical 1 30.2 49 0.0017 22.6 3.4 40 3-45 19-63 (104)
372 4exj_A Uncharacterized protein 30.1 49 0.0017 24.1 3.7 37 7-43 11-47 (238)
373 4a5o_A Bifunctional protein fo 29.8 1.5E+02 0.0051 23.9 6.8 49 7-55 50-99 (286)
374 2is8_A Molybdopterin biosynthe 29.8 1E+02 0.0036 21.9 5.4 59 13-73 26-90 (164)
375 4dej_A Glutathione S-transfera 29.6 76 0.0026 23.2 4.7 26 7-32 21-46 (231)
376 3l07_A Bifunctional protein fo 29.5 1.5E+02 0.0051 23.8 6.7 49 7-55 49-98 (285)
377 4h1h_A LMO1638 protein; MCCF-l 29.4 90 0.0031 25.0 5.4 70 6-77 28-112 (327)
378 3q18_A GSTO-2, glutathione S-t 29.4 42 0.0014 24.4 3.2 30 7-36 32-61 (239)
379 1gnw_A Glutathione S-transfera 29.4 29 0.001 24.4 2.2 24 8-31 12-35 (211)
380 3nbm_A PTS system, lactose-spe 29.3 1E+02 0.0036 20.9 5.0 69 3-81 17-87 (108)
381 3ivs_A Homocitrate synthase, m 29.3 1.6E+02 0.0056 24.8 7.2 61 8-68 151-212 (423)
382 3hv2_A Response regulator/HD d 29.3 1.2E+02 0.0042 19.8 5.5 47 5-59 22-68 (153)
383 1h75_A Glutaredoxin-like prote 29.2 92 0.0031 18.4 5.4 21 6-26 10-30 (81)
384 4evq_A Putative ABC transporte 29.0 87 0.003 23.8 5.1 70 9-78 36-112 (375)
385 3p2o_A Bifunctional protein fo 29.0 1.6E+02 0.0054 23.7 6.8 49 7-55 48-97 (285)
386 4fn4_A Short chain dehydrogena 28.9 1.7E+02 0.0058 22.5 6.8 55 5-60 39-95 (254)
387 1lng_A SRP19, signal recogniti 28.7 22 0.00076 23.9 1.4 21 6-26 27-47 (87)
388 1vhn_A Putative flavin oxidore 28.7 2.1E+02 0.0072 22.4 10.5 112 6-121 110-231 (318)
389 1fob_A Beta-1,4-galactanase; B 28.6 71 0.0024 25.5 4.7 46 11-56 30-80 (334)
390 1y5e_A Molybdenum cofactor bio 28.5 1.6E+02 0.0055 21.0 6.3 56 13-70 36-97 (169)
391 1kvn_A SRP19; RNA binding prot 28.3 24 0.00081 24.5 1.5 22 6-27 30-51 (104)
392 2vo4_A 2,4-D inducible glutath 28.3 88 0.003 22.2 4.7 29 7-35 13-42 (219)
393 4d9i_A Diaminopropionate ammon 28.2 62 0.0021 26.4 4.3 44 40-83 212-263 (398)
394 1nvm_A HOA, 4-hydroxy-2-oxoval 28.1 1.5E+02 0.0053 23.7 6.6 68 2-70 143-220 (345)
395 2guy_A Alpha-amylase A; (beta- 28.1 1.3E+02 0.0045 24.6 6.3 51 5-55 40-117 (478)
396 2qvg_A Two component response 28.1 1.2E+02 0.0041 19.3 5.8 54 4-60 14-70 (143)
397 1zl0_A Hypothetical protein PA 28.1 1.6E+02 0.0053 23.7 6.6 72 5-77 29-115 (311)
398 3ibh_A GST-II, saccharomyces c 28.0 96 0.0033 22.0 4.9 27 7-33 27-55 (233)
399 3oix_A Putative dihydroorotate 28.0 1.5E+02 0.005 24.2 6.5 47 7-54 178-225 (345)
400 2wc7_A Alpha amylase, catalyti 28.0 1E+02 0.0034 25.5 5.6 51 6-56 54-123 (488)
401 2xvl_A Alpha-xylosidase, putat 27.9 1.5E+02 0.0052 28.0 7.3 52 5-57 445-511 (1020)
402 3o8l_A 6-phosphofructokinase, 27.9 49 0.0017 30.4 3.9 26 34-59 94-119 (762)
403 1r31_A 3-hydroxy-3-methylgluta 27.8 20 0.00069 30.8 1.3 36 86-126 312-350 (428)
404 4a26_A Putative C-1-tetrahydro 27.8 1.7E+02 0.0057 23.7 6.7 49 7-55 52-101 (300)
405 1pq4_A Periplasmic binding pro 27.8 91 0.0031 24.4 5.1 61 17-78 204-266 (291)
406 1fui_A L-fucose isomerase; ket 27.7 3.2E+02 0.011 24.1 9.1 83 22-105 51-138 (591)
407 1xov_A PLY protein, plypsa; al 27.7 1.3E+02 0.0044 24.5 6.1 103 7-116 40-166 (326)
408 3kbq_A Protein TA0487; structu 27.6 1.5E+02 0.0051 21.8 6.0 67 11-80 26-97 (172)
409 2es9_A Putative cytoplasmic pr 27.4 29 0.00098 24.4 1.8 22 3-24 31-52 (115)
410 4id0_A Glutathione S-transfera 27.3 47 0.0016 23.4 3.0 25 7-31 11-35 (214)
411 1vkr_A Mannitol-specific PTS s 27.3 88 0.003 21.7 4.4 56 10-81 31-88 (125)
412 2hze_A Glutaredoxin-1; thiored 27.1 1.1E+02 0.0038 19.9 4.7 26 5-30 27-55 (114)
413 3c1r_A Glutaredoxin-1; oxidize 27.1 1.3E+02 0.0045 19.8 5.2 22 6-27 34-59 (118)
414 3ixl_A Amdase, arylmalonate de 27.1 2.1E+02 0.007 21.7 8.7 25 35-59 164-191 (240)
415 1iir_A Glycosyltransferase GTF 27.0 2.3E+02 0.0078 22.2 8.9 124 1-137 245-380 (415)
416 4e7p_A Response regulator; DNA 26.8 1.3E+02 0.0046 19.5 6.0 46 5-56 28-73 (150)
417 3gt7_A Sensor protein; structu 26.7 1.4E+02 0.0048 19.7 5.9 46 5-58 15-60 (154)
418 1psw_A ADP-heptose LPS heptosy 26.6 37 0.0013 26.0 2.5 30 49-82 261-290 (348)
419 1nhy_A EF-1-gamma 1, elongatio 26.6 38 0.0013 24.1 2.4 27 7-34 11-37 (219)
420 1m53_A Isomaltulose synthase; 26.6 1.2E+02 0.0042 25.7 6.0 51 5-55 42-112 (570)
421 3s1t_A Aspartokinase; ACT doma 26.6 1.7E+02 0.0058 21.3 6.1 23 8-30 29-51 (181)
422 3tla_A MCCF; serine protease, 26.4 72 0.0025 26.4 4.4 56 6-62 59-122 (371)
423 3i65_A Dihydroorotate dehydrog 26.4 1.7E+02 0.0057 24.7 6.7 36 21-57 268-304 (415)
424 2dh2_A 4F2 cell-surface antige 26.4 1.3E+02 0.0043 24.7 5.9 58 5-64 33-108 (424)
425 3etn_A Putative phosphosugar i 26.3 1.9E+02 0.0066 21.2 7.4 58 6-63 70-149 (220)
426 1tzj_A ACC deaminase, 1-aminoc 26.1 74 0.0025 24.9 4.3 45 39-83 177-227 (338)
427 3gtu_B Glutathione S-transfera 26.0 74 0.0025 22.8 4.0 26 8-33 15-40 (224)
428 2ocz_A 3-dehydroquinate dehydr 26.0 39 0.0013 26.0 2.5 54 27-81 116-182 (231)
429 2c0h_A Mannan endo-1,4-beta-ma 25.8 1.7E+02 0.0057 22.4 6.2 49 7-56 44-111 (353)
430 4g10_A Glutathione S-transfera 25.6 89 0.003 23.5 4.5 31 8-38 16-47 (265)
431 3lmz_A Putative sugar isomeras 25.6 1.6E+02 0.0054 21.6 5.9 45 6-54 87-131 (257)
432 1a4i_A Methylenetetrahydrofola 25.6 72 0.0025 26.0 4.2 44 10-62 178-221 (301)
433 3twe_A Alpha4H; unknown functi 25.5 33 0.0011 18.2 1.4 12 126-137 11-22 (27)
434 1j0a_A 1-aminocyclopropane-1-c 25.3 63 0.0021 25.4 3.7 45 39-84 172-220 (325)
435 2ycd_A Glutathione S-transfera 25.2 49 0.0017 23.9 2.9 28 8-35 33-62 (230)
436 3td9_A Branched chain amino ac 25.0 97 0.0033 23.6 4.7 67 12-78 39-111 (366)
437 2ws2_A NU-class GST, glutathio 24.8 49 0.0017 23.2 2.8 25 8-32 13-37 (204)
438 2z0x_A Putative uncharacterize 24.8 67 0.0023 22.5 3.4 46 10-55 7-54 (158)
439 1z41_A YQJM, probable NADH-dep 24.8 2.6E+02 0.0089 22.1 8.2 40 20-59 208-252 (338)
440 2c2x_A Methylenetetrahydrofola 24.6 2E+02 0.0067 23.1 6.5 49 7-55 47-96 (281)
441 4e5s_A MCCFLIKE protein (BA_56 24.4 90 0.0031 25.2 4.6 56 6-62 28-91 (331)
442 2xdo_A TETX2 protein; tetracyc 24.4 29 0.00098 27.5 1.5 47 32-78 8-55 (398)
443 1gcy_A Glucan 1,4-alpha-maltot 24.4 2E+02 0.0068 24.1 6.9 49 6-55 34-112 (527)
444 4aie_A Glucan 1,6-alpha-glucos 24.4 1.1E+02 0.0037 25.2 5.1 51 6-56 30-100 (549)
445 1xvl_A Mn transporter, MNTC pr 24.3 1.3E+02 0.0043 24.1 5.4 60 17-77 218-281 (321)
446 1d3c_A Cyclodextrin glycosyltr 24.2 1.3E+02 0.0044 26.3 5.8 50 6-55 53-135 (686)
447 1ea9_C Cyclomaltodextrinase; h 24.1 1.6E+02 0.0054 25.2 6.3 49 6-54 170-237 (583)
448 4gf0_A Glutathione S-transfera 24.1 81 0.0028 22.4 3.9 33 10-42 14-46 (215)
449 2l69_A Rossmann 2X3 fold prote 24.1 1.9E+02 0.0065 20.3 6.9 47 4-55 9-56 (134)
450 3cg4_A Response regulator rece 24.0 1.4E+02 0.0049 18.9 6.3 70 4-81 14-90 (142)
451 4b4u_A Bifunctional protein fo 24.0 53 0.0018 26.9 3.1 49 27-81 205-253 (303)
452 1p77_A Shikimate 5-dehydrogena 24.0 1.4E+02 0.0047 22.8 5.4 49 9-61 130-192 (272)
453 3tou_A Glutathione S-transfera 24.0 39 0.0013 24.4 2.1 29 6-34 10-38 (226)
454 2z84_A UFSP1, UFM1-specific pr 23.8 1.2E+02 0.0042 23.6 5.0 45 11-55 97-143 (218)
455 3mah_A Aspartokinase; aspartat 23.8 1.3E+02 0.0044 21.1 4.9 73 5-77 30-119 (157)
456 3ia7_A CALG4; glycosysltransfe 23.8 67 0.0023 24.6 3.5 80 49-137 297-378 (402)
457 1j0h_A Neopullulanase; beta-al 23.6 1.8E+02 0.006 24.9 6.5 50 6-55 174-242 (588)
458 2epi_A UPF0045 protein MJ1052; 23.6 63 0.0022 21.9 3.0 40 3-45 19-63 (100)
459 3i42_A Response regulator rece 23.5 1.4E+02 0.0048 18.6 5.8 48 4-59 10-57 (127)
460 4aef_A Neopullulanase (alpha-a 23.5 1.2E+02 0.0041 26.2 5.5 51 6-56 237-306 (645)
461 1wzl_A Alpha-amylase II; pullu 23.4 1.7E+02 0.0059 24.9 6.4 50 6-55 171-239 (585)
462 3i09_A Periplasmic branched-ch 23.4 2.2E+02 0.0075 21.6 6.5 70 9-78 25-101 (375)
463 3oti_A CALG3; calicheamicin, T 23.3 2.6E+02 0.0089 21.6 9.8 112 6-137 248-377 (398)
464 1t4y_A Adaptive-response senso 23.2 1.3E+02 0.0046 20.9 4.6 33 9-41 28-62 (105)
465 3ngx_A Bifunctional protein fo 23.1 1.6E+02 0.0055 23.5 5.7 48 7-55 42-90 (276)
466 2gou_A Oxidoreductase, FMN-bin 23.0 2.4E+02 0.0082 22.8 6.9 37 23-59 229-273 (365)
467 3ir4_A Glutaredoxin 2; glutath 22.9 93 0.0032 22.0 4.0 27 8-34 13-39 (218)
468 3n0w_A ABC branched chain amin 22.9 2.5E+02 0.0087 21.3 7.4 70 9-78 27-103 (379)
469 1uok_A Oligo-1,6-glucosidase; 22.4 1.4E+02 0.0047 25.3 5.5 51 6-56 29-99 (558)
470 1yq1_A Glutathione S-transfera 22.2 67 0.0023 22.5 3.0 24 8-31 13-36 (208)
471 1wx0_A Transaldolase; structur 22.2 2.2E+02 0.0076 21.8 6.3 41 7-52 150-190 (223)
472 3ksu_A 3-oxoacyl-acyl carrier 22.1 2.2E+02 0.0074 21.1 6.1 56 4-60 45-102 (262)
473 1qho_A Alpha-amylase; glycosid 22.0 1.9E+02 0.0065 25.2 6.5 51 5-55 49-127 (686)
474 3grc_A Sensor protein, kinase; 21.9 1.6E+02 0.0055 18.7 6.1 48 4-59 13-60 (140)
475 1qnr_A Endo-1,4-B-D-mannanase; 21.9 2E+02 0.007 21.8 6.0 51 6-57 34-111 (344)
476 1tv5_A Dhodehase, dihydroorota 21.9 3.6E+02 0.012 22.7 8.4 82 21-110 296-404 (443)
477 1a4i_A Methylenetetrahydrofola 21.9 2.3E+02 0.008 22.9 6.5 51 6-56 49-100 (301)
478 4h27_A L-serine dehydratase/L- 21.7 73 0.0025 25.7 3.5 42 40-82 187-233 (364)
479 4hwg_A UDP-N-acetylglucosamine 21.6 1.2E+02 0.004 24.6 4.7 62 16-79 55-124 (385)
480 2e6f_A Dihydroorotate dehydrog 21.6 1E+02 0.0034 23.9 4.2 54 5-58 103-169 (314)
481 1m7x_A 1,4-alpha-glucan branch 21.6 1.9E+02 0.0065 24.9 6.3 50 6-55 153-224 (617)
482 2pbq_A Molybdenum cofactor bio 21.6 2E+02 0.0067 20.8 5.6 56 13-70 30-93 (178)
483 3lop_A Substrate binding perip 21.6 1.7E+02 0.0059 22.1 5.5 58 21-78 44-105 (364)
484 2l82_A Designed protein OR32; 21.5 2.3E+02 0.0079 20.4 6.9 35 24-58 78-112 (162)
485 2x64_A Glutathione-S-transfera 21.5 79 0.0027 22.1 3.3 23 9-31 12-34 (207)
486 4a5o_A Bifunctional protein fo 21.5 1.2E+02 0.0041 24.5 4.7 43 11-62 175-217 (286)
487 2w61_A GAS2P, glycolipid-ancho 21.5 1.6E+02 0.0055 25.7 5.8 50 5-57 84-134 (555)
488 1wpc_A Glucan 1,4-alpha-maltoh 21.3 1.9E+02 0.0064 23.8 6.0 28 28-55 75-102 (485)
489 4b4u_A Bifunctional protein fo 21.3 2.5E+02 0.0085 22.8 6.6 49 7-55 68-117 (303)
490 4aql_A Guanine deaminase; hydr 21.2 2.4E+02 0.0081 23.0 6.6 96 6-108 241-352 (476)
491 3inp_A D-ribulose-phosphate 3- 21.2 1.7E+02 0.0058 22.7 5.4 45 7-56 179-223 (246)
492 3ktw_A SRP19, signal recogniti 21.2 37 0.0013 23.9 1.4 20 7-26 43-62 (109)
493 1zja_A Trehalulose synthase; s 21.0 1.9E+02 0.0066 24.4 6.2 50 6-55 30-99 (557)
494 2xhz_A KDSD, YRBH, arabinose 5 20.8 2.1E+02 0.0073 19.7 6.8 56 8-63 62-137 (183)
495 3sho_A Transcriptional regulat 20.8 2.2E+02 0.0074 19.7 8.6 52 2-53 46-118 (187)
496 2on5_A Nagst-2, Na glutathione 20.8 65 0.0022 22.5 2.7 24 8-31 13-36 (206)
497 3ijd_A Uncharacterized protein 20.7 53 0.0018 26.8 2.5 44 11-54 79-122 (315)
498 1f2d_A 1-aminocyclopropane-1-c 20.7 95 0.0032 24.5 3.9 45 39-83 180-230 (341)
499 3ose_A Serine/threonine-protei 20.6 80 0.0027 21.9 3.1 20 7-26 40-59 (120)
500 1b0a_A Protein (fold bifunctio 20.5 94 0.0032 25.1 3.9 48 9-65 171-218 (288)
No 1
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.5e-62 Score=377.44 Aligned_cols=138 Identities=33% Similarity=0.583 Sum_probs=136.0
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 10 mgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 89 (163)
T 3ors_A 10 MGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPI 89 (163)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred ECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++|+|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 90 ~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 150 (163)
T 3ors_A 90 ETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESS 150 (163)
T ss_dssp CCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999 999999999999999999999999999973
No 2
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=5e-62 Score=377.49 Aligned_cols=138 Identities=32% Similarity=0.537 Sum_probs=135.9
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 13 mgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 92 (169)
T 3trh_A 13 MGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVPM 92 (169)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCSSCEEEEEC
T ss_pred ECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCCCCEEEeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++|+|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 93 ~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 153 (169)
T 3trh_A 93 AGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQKLVQQRTA 153 (169)
T ss_dssp CCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999 999999999999999999999999999973
No 3
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=100.00 E-value=5.4e-62 Score=378.75 Aligned_cols=138 Identities=39% Similarity=0.620 Sum_probs=135.9
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 14 mgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 93 (174)
T 3lp6_A 14 MGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPV 93 (174)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred ECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++++|+| ||||+|||+|+||+||+|||++|||++|+|||+++|++||+||++||++
T Consensus 94 ~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (174)
T 3lp6_A 94 PLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDR 152 (174)
T ss_dssp CCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999999999999999999999999999999963
No 4
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=100.00 E-value=8.7e-62 Score=376.30 Aligned_cols=138 Identities=35% Similarity=0.554 Sum_probs=136.0
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|++++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 18 mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 97 (170)
T 1xmp_A 18 MGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPV 97 (170)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEE
T ss_pred ECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
+++.++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 98 ~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kl~~~r~~ 158 (170)
T 1xmp_A 98 QSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 158 (170)
T ss_dssp CCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999 999999999999999999999999999973
No 5
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=100.00 E-value=9e-62 Score=377.39 Aligned_cols=138 Identities=31% Similarity=0.528 Sum_probs=136.0
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 19 mGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 98 (174)
T 3kuu_A 19 MGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKTLVPVLGVPV 98 (174)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTCSSCEEEEEE
T ss_pred ECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++|+|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 99 ~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~~d~~l~~kl~~~r~~ 159 (174)
T 3kuu_A 99 QSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQS 159 (174)
T ss_dssp CCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999 999999999999999999999999999973
No 6
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=100.00 E-value=2.4e-61 Score=372.76 Aligned_cols=138 Identities=33% Similarity=0.587 Sum_probs=135.5
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 12 mgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 91 (166)
T 3oow_A 12 MGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPV 91 (166)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTCSSCEEEEEC
T ss_pred ECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhccCCCEEEeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++|+|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 92 ~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (166)
T 3oow_A 92 KSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAE 152 (166)
T ss_dssp CCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999 599999999999999999999999999973
No 7
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=100.00 E-value=2.3e-61 Score=377.58 Aligned_cols=138 Identities=41% Similarity=0.679 Sum_probs=136.0
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|++++|++||++||++|+|+||+|+++.+|++++++++++|||++||++||||||+|++|++||||||+
T Consensus 20 mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 99 (183)
T 1o4v_A 20 MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLPVIGVPV 99 (183)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred eccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
+++.++|+| ||||+|||+|+||+||+|||++|||++|+|||+++|++||+||++||++
T Consensus 100 ~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIla~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 100 KTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGIKYPEIARKVKEYKER 158 (183)
T ss_dssp CCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999999999999999999999999999999973
No 8
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=100.00 E-value=6.5e-61 Score=374.75 Aligned_cols=138 Identities=33% Similarity=0.498 Sum_probs=136.0
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 28 mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 107 (182)
T 1u11_A 28 MGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPV 107 (182)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred ECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHhccCCCEEEeeC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
+++.++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 108 ~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kL~~~r~~ 168 (182)
T 1u11_A 108 ESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRAL 168 (182)
T ss_dssp CCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999 999999999999999999999999999973
No 9
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-60 Score=372.06 Aligned_cols=138 Identities=35% Similarity=0.554 Sum_probs=135.6
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+|||++|+++.++|++|||+||++|+||||+|+++.+|++++++++++|||++||++||||||+|++|++||||||+
T Consensus 29 mGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~T~~PVIGVPv 108 (181)
T 4b4k_A 29 MGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPV 108 (181)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTTCCSCEEEEEC
T ss_pred ECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhcCCCCEEEEec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
.++.++|+| ||||+|||+|+||+||.|| +++|||++|+|||+++|++||+||+.||++
T Consensus 109 ~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~~d~~l~~kl~~~r~~ 169 (181)
T 4b4k_A 109 QSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 169 (181)
T ss_dssp CCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 998999999 9999999999999999999 789999999999999999999999999973
No 10
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=100.00 E-value=4e-60 Score=364.10 Aligned_cols=136 Identities=28% Similarity=0.419 Sum_probs=132.3
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|+++++++ +++|||++||+++|||||+|++|++||||||
T Consensus 9 mgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 88 (159)
T 3rg8_A 9 MGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDGFVKGATIACP 88 (159)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHHHSSSCEEECC
T ss_pred ECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHhccCCCEEEee
Confidence 899999999999999999999999999999999999999999999875 7999999999999999999999999999999
Q ss_pred CCCCCCCchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 80 LLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 80 ~~~~~~~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
+++++|+|+|||||+|||+|+||+|| ||++|||++|+|||+++|++||+||++||++
T Consensus 89 ~~~~~l~G~dLlS~vqmp~GvpVatv--~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 145 (159)
T 3rg8_A 89 PPSDSFAGADIYSSLRMPSGISPALV--LEPKNAALLAARIFSLYDKEIADSVKSYMES 145 (159)
T ss_dssp CCCCGGGGTHHHHHHCCCTTCCCEEC--CSHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCccHHHHHhCCCCCceEEe--cCchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998 7999999999999999999999999999963
No 11
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=3e-60 Score=368.39 Aligned_cols=138 Identities=38% Similarity=0.567 Sum_probs=135.8
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++|||+||++|+|+||+|+++.+|++++++++++|||++||+++|||||+|++|++||||||+
T Consensus 19 mGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~~t~~PVIgVPv 98 (173)
T 4grd_A 19 MGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTTVPVLGVPV 98 (173)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHHHCCSCEEEEEE
T ss_pred eCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhheecCCCCEEEEEc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecC--CchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~--~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++++++|+| |||++|||+|+||+||.|| |++|||++|+|||+++|+++|+||++||++
T Consensus 99 ~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa~~d~~l~~kl~~~r~~ 159 (173)
T 4grd_A 99 ASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILSGNSVDYANRLAAFRVR 159 (173)
T ss_dssp CCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999 999999999999999999999999999973
No 12
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.4e-60 Score=363.09 Aligned_cols=134 Identities=30% Similarity=0.521 Sum_probs=130.2
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|||+||+++|+|+.++|++||++||++|+|+||+|+++.+|++++++ +|||++||+++|||||+|++|++||||||+
T Consensus 6 mgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvva~~t~~PVIgVP~ 82 (157)
T 2ywx_A 6 MGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVVASLTTKPVIAVPV 82 (157)
T ss_dssp ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHHHTTCSSCEEEEEE
T ss_pred EccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHHHhccCCCEEEecC
Confidence 89999999999999999999999999999999999999999988755 999999999999999999999999999999
Q ss_pred CCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 032570 81 LSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 138 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl~~~~~~ 138 (138)
++.++|+| ||||+|||+|+||+||+|||++|||++|+|||+++|+++|+||++||++
T Consensus 83 -~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 140 (157)
T 2ywx_A 83 -DAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILALKDENIAKKLIEYREK 140 (157)
T ss_dssp -CSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred -CCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 77899999 9999999999999999999999999999999999999999999999973
No 13
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=356.52 Aligned_cols=134 Identities=23% Similarity=0.383 Sum_probs=130.9
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCC-eEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI-KIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~-~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
|||+||+|+|+||+.+|++||++||++|+||||+|+++.+|++++++++. +|||++|||+||||||+||+|++||||||
T Consensus 272 ~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP 351 (425)
T 2h31_A 272 MGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCP 351 (425)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECC
T ss_pred ecCcccHHHHHHHHHHHHHcCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHHhccCCCCEEEee
Confidence 89999999999999999999999999999999999999999999999999 69999999999999999999999999999
Q ss_pred CCCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHHHHHHh
Q 032570 80 LLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVE 137 (138)
Q Consensus 80 ~~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl~~~~~ 137 (138)
++ .+++|+| ||||+|||+|+||+||+ |++|||++|+|||+++|++||+||++||+
T Consensus 352 ~~-~~~~G~daLls~vqmp~g~pvatv~--~~~nAa~~A~~Il~~~~~~l~~kl~~~~~ 407 (425)
T 2h31_A 352 PL-TPDWGVQDVWSSLRLPSGLGCSTVL--SPEGSAQFAAQIFGLSNHLVWSKLRASIL 407 (425)
T ss_dssp CC-CTTTHHHHGGGTSSCCSSCCCEECC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred Cc-cccccHHHHHHHhcCCCCCceEEec--CchHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 97 5699999 99999999999999998 89999999999999999999999999996
No 14
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=96.94 E-value=0.0059 Score=46.75 Aligned_cols=117 Identities=12% Similarity=0.088 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 86 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~ 86 (138)
....+.+.+++++++...++.+. ..++..+.++++ .++++|||+-.|.+ ..+-.++..|||-+|++
T Consensus 14 ~~l~~~~~~i~~e~~~~i~i~~~----~l~~~v~~a~~~-~~~~dVIISRGgta----~~lr~~~~iPVV~I~~s----- 79 (196)
T 2q5c_A 14 ENLLNLFPKLALEKNFIPITKTA----SLTRASKIAFGL-QDEVDAIISRGATS----DYIKKSVSIPSISIKVT----- 79 (196)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEC----CHHHHHHHHHHH-TTTCSEEEEEHHHH----HHHHTTCSSCEEEECCC-----
T ss_pred HHHHHHHHHHHhhhCCceEEEEC----CHHHHHHHHHHh-cCCCeEEEECChHH----HHHHHhCCCCEEEEcCC-----
Confidence 34445666677778775444443 357777777777 78999999955544 45556788999999876
Q ss_pred chhhhhhhcCCC--CCeeeEEecCCchhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 032570 87 EDDVINSIRMPS--HVQVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 137 (138)
Q Consensus 87 G~dLlS~lqmP~--GvpvatV~I~~~~nAA~~AaqIl~~~--------~~~l~~kl~~~~~ 137 (138)
|.|++..++... +-.++.|+-.+..+.+-.-.++|++. .+++++.+++.++
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~ 140 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKT 140 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHH
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 456444443321 23689898888887777778888853 3467777777665
No 15
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=96.70 E-value=0.029 Score=44.17 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHh-hhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDW 85 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~-~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~ 85 (138)
....+.+.+++.+++...++.+.. ...++..+.+++. ..++++|||+-.|.+ ..+-.++..|||-+|++
T Consensus 22 ~~L~~~~~~i~~e~~~~~~I~vi~--~~le~av~~a~~~~~~~~~dVIISRGgta----~~Lr~~~~iPVV~I~vs---- 91 (225)
T 2pju_A 22 TRLFELFRDISLEFDHLANITPIQ--LGFEKAVTYIRKKLANERCDAIIAAGSNG----AYLKSRLSVPVILIKPS---- 91 (225)
T ss_dssp HHHHHHHHHHHTTTTTTCEEEEEC--CCHHHHHHHHHHHTTTSCCSEEEEEHHHH----HHHHTTCSSCEEEECCC----
T ss_pred HHHHHHHHHHHHhhCCCceEEEec--CcHHHHHHHHHHHHhcCCCeEEEeCChHH----HHHHhhCCCCEEEecCC----
Confidence 344556677777888877888754 3356666666554 335699999965554 44556788999999875
Q ss_pred CchhhhhhhcCCC--CCeeeEEecCCchhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 032570 86 SEDDVINSIRMPS--HVQVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 137 (138)
Q Consensus 86 ~G~dLlS~lqmP~--GvpvatV~I~~~~nAA~~AaqIl~~~--------~~~l~~kl~~~~~ 137 (138)
|.|++..++... +-.++.|+-.+..+..-.-.++|++. .+++++.+++.++
T Consensus 92 -~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~ 152 (225)
T 2pju_A 92 -GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA 152 (225)
T ss_dssp -HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 467455554432 22589998888888888888899864 5578888877765
No 16
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.003 Score=53.17 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhHHhhhccCCcEEEecCCC
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~gvva~~t~~PVIgvP~~~ 82 (138)
..++..+.|++ |+++.+.....+-+.+.+.+..+.+++.++++||++-|++. -++..+|....+|+|.||+..
T Consensus 67 ~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTa 140 (387)
T 3uhj_A 67 LSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIA 140 (387)
T ss_dssp HHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred HHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 56778888999 99885556678888899999998888888999999999864 588999999999999999974
No 17
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=96.48 E-value=0.0047 Score=50.90 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc-CCchhHHhhhccCCcEEEecCCC
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~-~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
..++..+.|++-|+++.+.+.+-+.+.+.+.+..+.+.+.++++||++-|+ ..-+++++|....+|+|.||+..
T Consensus 46 ~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPTTa 120 (370)
T 1jq5_A 46 AGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDAYIVIVPTAA 120 (370)
T ss_dssp THHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred HHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHhcCCCEEEecccc
Confidence 467777888888988765555556666678888888888889999999886 46699999988999999999974
No 18
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=96.42 E-value=0.0063 Score=50.80 Aligned_cols=75 Identities=13% Similarity=0.144 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhHHhhhcc---------------
Q 032570 9 VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANS--------------- 71 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~gvva~~t--------------- 71 (138)
..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+++.++++||++-|++. -++..+|...
T Consensus 47 ~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv~D~aK~ia~~~~~~~~~~d~~~~~~~ 126 (383)
T 3ox4_A 47 VVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGIDKS 126 (383)
T ss_dssp HHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHHSCSSGGGGCEESCC
T ss_pred hHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHHHHHHHHHHHHHhCCCCHHHHhccccc
Confidence 567788889998998743 33458999999999999998889999999999864 4777887765
Q ss_pred ---CCcEEEecCCCC
Q 032570 72 ---QILVIRVPLLSE 83 (138)
Q Consensus 72 ---~~PVIgvP~~~~ 83 (138)
.+|+|.||+..+
T Consensus 127 ~~~~~p~i~IPTTag 141 (383)
T 3ox4_A 127 KKPALPLMSINTTAG 141 (383)
T ss_dssp SSCCSCEEEEECSSS
T ss_pred ccCCCCEEEEeCCCC
Confidence 899999999753
No 19
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=95.98 E-value=0.022 Score=47.11 Aligned_cols=75 Identities=12% Similarity=0.225 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcCCeEEEEecCc-CCchhHHhhhc----------------
Q 032570 9 VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAAN---------------- 70 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~-~a~L~gvva~~---------------- 70 (138)
..++..+.|++-|+++.+ .-...+.+.+.+.+..+.+++.++++||++-|+ .--++.++|..
T Consensus 57 ~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~AK~iA~~~~~~~~~~~~~~~~~~ 136 (371)
T 1o2d_A 57 SLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREK 136 (371)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGG
T ss_pred HHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHHHhCCCCCHHHHhcccC
Confidence 678888899998987643 224588999999999999988889999999886 45588888875
Q ss_pred --cCCcEEEecCCCC
Q 032570 71 --SQILVIRVPLLSE 83 (138)
Q Consensus 71 --t~~PVIgvP~~~~ 83 (138)
..+|+|.||+..+
T Consensus 137 ~~~~~p~i~IPTTag 151 (371)
T 1o2d_A 137 VKHWLPVVEIPTTAG 151 (371)
T ss_dssp CCCCCCEEEEECSSC
T ss_pred CCCCCeEEEEeCCCc
Confidence 5789999999853
No 20
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=95.98 E-value=0.0093 Score=48.80 Aligned_cols=75 Identities=11% Similarity=-0.001 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc-CCchhHHhhhccCCcEEEecCCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQILVIRVPLLSE 83 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~-~a~L~gvva~~t~~PVIgvP~~~~ 83 (138)
...++..+.|++-|+++.+..-..+-+.+.+.+. +.+.+.++++||++-|+ ..-+++++|....+|+|.||+..+
T Consensus 48 ~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv~D~aK~vA~~~~~p~i~IPTT~~ 123 (354)
T 3ce9_A 48 LFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKAIDAVKYMAFLRKLPFISVPTSTS 123 (354)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHHHHHHHHHHHHHTCCEEEEESCCS
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHHHHHHHHHHhhcCCCEEEecCccc
Confidence 4567888888888988765442467788888888 87777889999999886 456999999889999999999764
No 21
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=95.74 E-value=0.016 Score=47.93 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC-CchhHHhhhcc---------------
Q 032570 9 VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANS--------------- 71 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~-a~L~gvva~~t--------------- 71 (138)
..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+++.++++||++-|++ --++.++|...
T Consensus 47 ~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~~~d~~~~~ 126 (386)
T 1rrm_A 47 VVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLS 126 (386)
T ss_dssp HHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEEC
T ss_pred HHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHHHHHHHHHHHHhCCCCCCHHHHhccc
Confidence 577888888888887642 2234788889999999999888999999998864 45888887754
Q ss_pred -----CCcEEEecCCC
Q 032570 72 -----QILVIRVPLLS 82 (138)
Q Consensus 72 -----~~PVIgvP~~~ 82 (138)
.+|+|.||+..
T Consensus 127 ~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 127 PTNKPSVPILAIPTTA 142 (386)
T ss_dssp CCCSCCSCEEEEECSS
T ss_pred ccCCCCCCEEEEeCCC
Confidence 78999999975
No 22
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=95.74 E-value=0.0073 Score=50.09 Aligned_cols=75 Identities=12% Similarity=0.055 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc-hhHHhhhccCCcEEEecCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~-L~gvva~~t~~PVIgvP~~~ 82 (138)
....++..+.|++.++.+.-. ...|.+.+.+.+.++.+++.++++||++-|++.. ++..+|....+|+|.||+..
T Consensus 46 ~~~~~~v~~~L~~~~~~v~~~-v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~p~i~IPTTa 121 (353)
T 3hl0_A 46 KGDAEALASRLGRLAAGVFSE-AAMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLGKAIALRTDAAQIVIPTTY 121 (353)
T ss_dssp HHHHHHHHHHHGGGEEEEECC-CCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred hhHHHHHHHHHhhCCcEEecC-cCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 346778888888754321111 1256777888888888888899999999998654 89999999999999999975
No 23
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=95.73 E-value=0.029 Score=46.89 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHh------CCCeEEEEEcc---CCCchHHHHHHHHhhhcC--C---eEEEEecCc-CCchhHHhhh--cc
Q 032570 9 VMNDAARTLSDF------GVPYEIKILPP---HQNCKEALSYALSAKERG--I---KIIIVGDGV-EAHLSGVAAA--NS 71 (138)
Q Consensus 9 ~~~~~~~~L~~~------gi~~~~~V~Sa---HR~p~~~~~~~~~~~~~~--~---~viIa~AG~-~a~L~gvva~--~t 71 (138)
+.++..+.|++. |+.+...+... +++.+.+.++.+.+.+.+ + ++||++-|+ ..-+++++|+ ..
T Consensus 51 ~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGsv~D~ak~~Aa~~~r 130 (393)
T 1sg6_A 51 YTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMR 130 (393)
T ss_dssp HHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcHHHHHHHHHHHHhcC
Confidence 456777777776 77766455555 888899999998888778 8 999999886 5679999995 57
Q ss_pred CCcEEEecCC
Q 032570 72 QILVIRVPLL 81 (138)
Q Consensus 72 ~~PVIgvP~~ 81 (138)
..|+|.||+.
T Consensus 131 gip~i~IPTT 140 (393)
T 1sg6_A 131 GVRYVQVPTT 140 (393)
T ss_dssp CCEEEEEECS
T ss_pred CCCEEEECCc
Confidence 8999999995
No 24
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=95.69 E-value=0.014 Score=48.28 Aligned_cols=74 Identities=11% Similarity=0.086 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC-CchhHHhhhc----------------
Q 032570 9 VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAAN---------------- 70 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~-a~L~gvva~~---------------- 70 (138)
..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+++.++++||++-|++ --++.++|..
T Consensus 51 ~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~ 130 (387)
T 3bfj_A 51 AVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETL 130 (387)
T ss_dssp SHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCC
T ss_pred HHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHHhCCCCHHHHhccccc
Confidence 688889999998987632 2234788899999999999888999999998864 5588888875
Q ss_pred --cCCcEEEecCCC
Q 032570 71 --SQILVIRVPLLS 82 (138)
Q Consensus 71 --t~~PVIgvP~~~ 82 (138)
..+|+|.||+..
T Consensus 131 ~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 131 TNPLPPIVAVNTTA 144 (387)
T ss_dssp CSCCCCEEEEECST
T ss_pred CCCCCCEEEEeCCC
Confidence 578999999975
No 25
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=95.67 E-value=0.016 Score=49.71 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC-CchhHHhhhccCCcEEEecCCC
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~-a~L~gvva~~t~~PVIgvP~~~ 82 (138)
..++..+.|++-|+++.+.+.+-+.+-+.+.+..+.+++ ++++||++-|++ .-+++++|....+|+|.||+..
T Consensus 106 ~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSviD~AK~iA~~~giP~I~IPTTA 179 (450)
T 1ta9_A 106 CANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKTMDSAKYIAHSMNLPSIICPTTA 179 (450)
T ss_dssp THHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred HHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 467778888888998765566666666678887777766 899999998874 5699999988999999999974
No 26
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=95.67 E-value=0.028 Score=47.09 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhcCCeEEEEecCcC-CchhHHhhhc--------------
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAAN-------------- 70 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~~~~viIa~AG~~-a~L~gvva~~-------------- 70 (138)
..+++.+.|++-|+.+. +.+ .+.+.+.+.+.++.+++.++++||++-|++ --++.++|..
T Consensus 60 ~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA~~~~~~~~~~d~~~~~ 137 (407)
T 1vlj_A 60 VYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGK 137 (407)
T ss_dssp HHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTS
T ss_pred HHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhHHHHHHHHHHHHhCCCCHHHHhccc
Confidence 57888888988888764 333 478888999999988888999999998864 4578888874
Q ss_pred ----cCCcEEEecCCC
Q 032570 71 ----SQILVIRVPLLS 82 (138)
Q Consensus 71 ----t~~PVIgvP~~~ 82 (138)
..+|+|.||+..
T Consensus 138 ~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 138 YQIEKALPIFDVLTIS 153 (407)
T ss_dssp CCCCCCCCEEEEECSC
T ss_pred ccCCCCCCEEEEeCCC
Confidence 478999999975
No 27
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=95.32 E-value=0.011 Score=49.09 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhHHhhhccCCcEEEecCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~gvva~~t~~PVIgvP~~~ 82 (138)
....++..+.|++.++.+ +.-...|.+.+.+.+.++.+++.++++||++-|++. -++..+|....+|+|.||+..
T Consensus 48 ~~~~~~v~~~L~~~~~~~-f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~aK~iA~~~~~p~i~IPTT~ 123 (358)
T 3jzd_A 48 QAEAERIADLLGPLSAGV-YAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIALETGMPIVAIPTTY 123 (358)
T ss_dssp HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHCCCEEEEECSS
T ss_pred HHHHHHHHHHhccCCEEE-ecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 345677777787653211 111235677788888888888888999999999965 489999999999999999974
No 28
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=95.09 E-value=0.056 Score=45.82 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhcCC---eEEEEecCc-CCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~~~---~viIa~AG~-~a~L~gvva~--~t~~PVIgvP 79 (138)
+.+++.+.|++-|+++++.+.. .+++.+.+.+..+.+.+.++ ++||++-|+ ..-+++++|+ ....|+|.||
T Consensus 77 ~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv~D~ak~~Aa~~~rgip~I~IP 156 (390)
T 3okf_A 77 YAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIP 156 (390)
T ss_dssp HHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEE
T ss_pred HHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcHHhhHHHHHHHHhcCCCCEEEeC
Confidence 6788999999999988766553 57888999999888877777 699998887 4568888874 5789999999
Q ss_pred CC
Q 032570 80 LL 81 (138)
Q Consensus 80 ~~ 81 (138)
+.
T Consensus 157 TT 158 (390)
T 3okf_A 157 TT 158 (390)
T ss_dssp CS
T ss_pred CC
Confidence 97
No 29
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=94.28 E-value=0.34 Score=33.76 Aligned_cols=69 Identities=23% Similarity=0.272 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch-----hHH---hhhccCCcEEEecCC
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SGV---AAANSQILVIRVPLL 81 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L-----~gv---va~~t~~PVIgvP~~ 81 (138)
.+++.+.++..|++++..+..- +-...+++.+++.+++.||.++-..+.+ +++ +.-++..||+-||..
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~G----~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVlvv~~~ 160 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVVG----IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECCC
T ss_pred HHHHHHHHHHcCCceEEEEcCC----CHHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEEEEeCC
Confidence 3344455556799888776532 2334455666667899888776543332 333 345689999999875
Q ss_pred C
Q 032570 82 S 82 (138)
Q Consensus 82 ~ 82 (138)
.
T Consensus 161 ~ 161 (162)
T 1mjh_A 161 N 161 (162)
T ss_dssp C
T ss_pred C
Confidence 4
No 30
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=94.12 E-value=0.11 Score=43.47 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhc---CCeEEEEecCcC-CchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKER---GIKIIIVGDGVE-AHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~---~~~viIa~AG~~-a~L~gvva~--~t~~PVIgvP 79 (138)
..++..+.|++-|+++++.+.. .+++.+.+.+..+.+.+. +.+++|++-|++ .-+++++|+ ....|+|.||
T Consensus 57 ~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGsv~D~ak~~Aa~~~rgip~i~IP 136 (368)
T 3qbe_A 57 TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLP 136 (368)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEE
T ss_pred HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChHHHHHHHHHHHHhccCCcEEEEC
Confidence 4678888999999987766543 567778888888777553 368999998884 568999984 5789999999
Q ss_pred CC
Q 032570 80 LL 81 (138)
Q Consensus 80 ~~ 81 (138)
+.
T Consensus 137 TT 138 (368)
T 3qbe_A 137 TT 138 (368)
T ss_dssp CS
T ss_pred CC
Confidence 96
No 31
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.96 E-value=0.044 Score=45.65 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=46.5
Q ss_pred ccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc-hhHHhhhccCCcEEEecCCC
Q 032570 30 PPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 30 SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~-L~gvva~~t~~PVIgvP~~~ 82 (138)
..|.+.+.+.+.++.+++.++++||++-|++.. ++..+|....+|+|.||+..
T Consensus 69 ~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~P~i~IPTTa 122 (364)
T 3iv7_A 69 VMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTY 122 (364)
T ss_dssp CTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCCCEEEEECSS
T ss_pred ecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEcCCc
Confidence 467788889999888888899999999998654 88899999999999999975
No 32
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=93.73 E-value=0.1 Score=42.75 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhcCC---eEEEEecCc-CCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~~~---~viIa~AG~-~a~L~gvva~--~t~~PVIgvP 79 (138)
+.++..+.| +-| .+++.+.. .+++.+.+.+..+.+.+.++ ++||++-|+ ..-+++++|+ ....|+|.||
T Consensus 46 ~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~vA~~~~rgip~i~IP 123 (354)
T 1xah_A 46 FANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVP 123 (354)
T ss_dssp HHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEE
T ss_pred HHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHHHHHHHHHHHHhccCCCEEEEC
Confidence 345555556 556 56655553 57788999999988888788 899999886 5569999994 5789999999
Q ss_pred CCC
Q 032570 80 LLS 82 (138)
Q Consensus 80 ~~~ 82 (138)
+..
T Consensus 124 TT~ 126 (354)
T 1xah_A 124 TTI 126 (354)
T ss_dssp CST
T ss_pred Ccc
Confidence 974
No 33
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=93.63 E-value=0.76 Score=32.66 Aligned_cols=71 Identities=15% Similarity=0.196 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--------hhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--------va~~t~~PVIgv 78 (138)
...+++.+.++..|++ ++..+..- . -...+++.+++.+++.||.++-....+... +.-+++.||+-|
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G--~--~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVlvV 156 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVG--A--PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECS--S--HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecC--C--HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEEEE
Confidence 3456666777788998 88777642 2 345566666778899888887655555543 334678999999
Q ss_pred cCCC
Q 032570 79 PLLS 82 (138)
Q Consensus 79 P~~~ 82 (138)
|...
T Consensus 157 ~~~~ 160 (163)
T 1tq8_A 157 HTTE 160 (163)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 8754
No 34
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=93.50 E-value=1.9 Score=32.87 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
..+.+.+.+.++++|+ ++.+......+++..++++.+..++++.||........+...+.- ....|||.+=.
T Consensus 18 ~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 18 QKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp HHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESS
T ss_pred HHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECC
Confidence 4567778888899985 666777788888888888888888999888887766665555543 35789987643
No 35
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=93.37 E-value=0.36 Score=37.06 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhCC---CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGV---PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi---~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
.+.+.+.+.|++.|. ...+.++..++.+++..++++.+.+++++.||+... . +..-+.......||+-|-.
T Consensus 18 ~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~~-~-~~~~~~~~~~~iPvV~~~~ 91 (295)
T 3lft_A 18 LIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIAT-P-AAQGLASATKDLPVIMAAI 91 (295)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEESH-H-HHHHHHHHCSSSCEEEESC
T ss_pred HHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCc-H-HHHHHHHcCCCCCEEEEec
Confidence 456778888999998 777888999999999999999998889999888642 2 2222222346789998754
No 36
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=93.28 E-value=0.11 Score=43.34 Aligned_cols=70 Identities=17% Similarity=0.185 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhcCCeEEEEecCcC-CchhHHhhhc--------------
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAAN-------------- 70 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~~~~viIa~AG~~-a~L~gvva~~-------------- 70 (138)
..++..+.|+ |+++ .+.+ .+.+.+.+.+.++.+++.++++||++-|++ --++.++|..
T Consensus 67 ~~~~v~~~L~--g~~~--~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA~~~~~~~~~~~~d~~~ 142 (408)
T 1oj7_A 67 VLDQVLDALK--GMDV--LEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQ 142 (408)
T ss_dssp HHHHHHHHTT--TSEE--EEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHH
T ss_pred HHHHHHHHhC--CCEE--EEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHhCCCCCCHHHHhc
Confidence 4556666665 6654 3433 578889999999888888999999998874 4578888774
Q ss_pred -------cCCcEEEecCCC
Q 032570 71 -------SQILVIRVPLLS 82 (138)
Q Consensus 71 -------t~~PVIgvP~~~ 82 (138)
..+|+|.||+..
T Consensus 143 ~~~~~~~~~~p~i~IPTTa 161 (408)
T 1oj7_A 143 TGGKEIKSAIPMGCVLTLP 161 (408)
T ss_dssp TTTTTCCCCCCEEEEESSC
T ss_pred cccCcCCCCCCEEEEeCCC
Confidence 458999999975
No 37
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=93.26 E-value=1.8 Score=32.56 Aligned_cols=69 Identities=9% Similarity=0.014 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP~ 80 (138)
.+.+.+.+.++++|+ ++.+...+..+++..++++...+++++-||...... ....+. .....|||.+=.
T Consensus 25 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~~~~~~~iPvV~~~~ 95 (291)
T 3egc_A 25 EVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG--EHDYLRTELPKTFPIVAVNR 95 (291)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS--CCHHHHHSSCTTSCEEEESS
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC--ChHHHHHhhccCCCEEEEec
Confidence 456677788888885 677788888899888899888888899888655443 223332 245789987643
No 38
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=92.93 E-value=2.8 Score=34.38 Aligned_cols=115 Identities=11% Similarity=0.074 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec-CcCCchhHHhhhccCCcEEEecCCCCCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-GVEAHLSGVAAANSQILVIRVPLLSEDWS 86 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A-G~~a~L~gvva~~t~~PVIgvP~~~~~~~ 86 (138)
.+.+-+.+..+++|-++++.++......+...+.++++.++++++||+.. +....+--+..-+...|++-|-...
T Consensus 45 ~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g~~~~~~~~~vA~~~Pdv~fv~id~~~---- 120 (356)
T 3s99_A 45 QHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVKVAKKFPDVKFEHATGYK---- 120 (356)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECSGGGHHHHHHHHTTCTTSEEEEESCCC----
T ss_pred HHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEeccc----
Confidence 35566666777899667887766655555667888888888999888764 2343443333334466777663211
Q ss_pred chhhhhhhcCCCCCeeeEEecC---CchhHHHHHHHHH---------ccCCHHHHHHHHHHHh
Q 032570 87 EDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVL---------GIADEDLLERIRKYVE 137 (138)
Q Consensus 87 G~dLlS~lqmP~GvpvatV~I~---~~~nAA~~AaqIl---------~~~~~~l~~kl~~~~~ 137 (138)
. .-.|.++..+ +++-|+.+|+.+. +...+.+.+++..|++
T Consensus 121 --------~---~~Nv~sv~~~~~eg~ylaG~~A~~~tk~~kIGfVgg~~~p~v~~~~~GF~~ 172 (356)
T 3s99_A 121 --------T---ADNMSAYNARFYEGRYVQGVIAAKMSKKGIAGYIGSVPVPEVVQGINSFML 172 (356)
T ss_dssp --------C---BTTEEEEEECHHHHHHHHHHHHHHHCSSCEEEEEECCCCHHHHHHHHHHHH
T ss_pred --------c---CCcEEEEEechhHHHHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHHHH
Confidence 0 1126666665 3344444444432 2245677777777764
No 39
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=92.92 E-value=0.3 Score=40.29 Aligned_cols=72 Identities=22% Similarity=0.260 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHhhhcC---CeEEEEecCc-CCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGV-EAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~S---aHR~p~~~~~~~~~~~~~~---~~viIa~AG~-~a~L~gvva~--~t~~PVIgvP 79 (138)
+.++..+.|++- +.++..+.. .|++.+.+.+..+.+.+.+ .++||++-|+ ..-+++++|+ ....|+|.||
T Consensus 49 ~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGsv~D~ak~~Aa~~~rgip~i~IP 127 (368)
T 2gru_A 49 IVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVAAGMMFRGIALIHVP 127 (368)
T ss_dssp HHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHHHHHHHHHHHHHBTTCCEEEEEE
T ss_pred HHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChHHHHHHHHHHHHhcCCCCEEEEC
Confidence 677888888765 666554443 6778888888887776655 7999999776 6679999996 4579999999
Q ss_pred CC
Q 032570 80 LL 81 (138)
Q Consensus 80 ~~ 81 (138)
+.
T Consensus 128 TT 129 (368)
T 2gru_A 128 TT 129 (368)
T ss_dssp CS
T ss_pred Cc
Confidence 94
No 40
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=92.69 E-value=1.8 Score=33.09 Aligned_cols=110 Identities=10% Similarity=0.141 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc---hhHHhhhccCCcEEEecCCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH---LSGVAAANSQILVIRVPLLSE 83 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~---L~gvva~~t~~PVIgvP~~~~ 83 (138)
..+.+.+.+.+++.|. ++.+...+..+++-.++++....++++-+|........ +.-.. . ..|||.+=...
T Consensus 31 ~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~--~-~iPvV~i~~~~- 104 (303)
T 3kke_A 31 ADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVL--E-GVPAVTINSRV- 104 (303)
T ss_dssp HHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHH--T-TSCEEEESCCC-
T ss_pred HHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHh--C-CCCEEEECCcC-
Confidence 3566778888889986 55567788888888888888888889987776554332 22222 2 78998763321
Q ss_pred CCCchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccC------------CHHHHHHHHHHHh
Q 032570 84 DWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKYVE 137 (138)
Q Consensus 84 ~~~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~------------~~~l~~kl~~~~~ 137 (138)
++ ++..|.+|+-..+-+.+-.++... .....+|++.|++
T Consensus 105 --------------~~-~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~ 155 (303)
T 3kke_A 105 --------------PG-RVGSVILDDQKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGYLE 155 (303)
T ss_dssp --------------TT-CCCEEEECHHHHHHHHHHHHHHTTCCSEEEEESCSSCHHHHHHHHHHHH
T ss_pred --------------CC-CCCEEEECcHHHHHHHHHHHHHCCCCeEEEEeCCCcCccHHHHHHHHHH
Confidence 12 344566665554444443343322 2344667777764
No 41
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=92.65 E-value=1.3 Score=30.95 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCCeEE--EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--------HhhhccCCcEEEec
Q 032570 10 MNDAARTLSDFGVPYEI--KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRVP 79 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~--~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PVIgvP 79 (138)
.+++.+.++..|++++. .+..- +-...+++.+++.+++.||..+-....+.. -+.-++..||+-||
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g----~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVlvv~ 155 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFG----IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIK 155 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHcCCceeeeeEEecC----ChHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEEEEc
Confidence 44455555667999887 66532 234455666667789988887665444322 23456899999999
Q ss_pred CCC
Q 032570 80 LLS 82 (138)
Q Consensus 80 ~~~ 82 (138)
...
T Consensus 156 ~~~ 158 (170)
T 2dum_A 156 EVD 158 (170)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 42
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=92.39 E-value=2.1 Score=32.01 Aligned_cols=68 Identities=10% Similarity=-0.003 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.++++|. ++.+...+..++...++++...+++++-||........ ..+. .....|||.+=
T Consensus 30 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~--~~~~~l~~~~iPvV~~~ 99 (292)
T 3k4h_A 30 EVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND--RIIQYLHEQNFPFVLIG 99 (292)
T ss_dssp HHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC--HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh--HHHHHHHHCCCCEEEEC
Confidence 456677788888985 66677777777777888888888889988876544332 2222 24678998763
No 43
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=92.37 E-value=0.65 Score=35.80 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhCC----CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi----~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
.+.+.+.+.|++.|. +..+-++..++.+++..++++.+.+++++.||+.... + ...+.......||+-|-
T Consensus 24 ~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~~~-~-~~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 24 ATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATP-T-AQALVSATKTIPIVFTA 97 (302)
T ss_dssp HHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEESHH-H-HHHHHHHCSSSCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECChH-H-HHHHHhcCCCcCEEEEe
Confidence 456778888999988 7788889999999999999999988889998876422 1 11222235678999874
No 44
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=92.23 E-value=0.69 Score=31.14 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh-------hhccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA-------AANSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv-------a~~t~~PVIgvP 79 (138)
..+++.+.+++.|++++..+..- . -...+++.++ +++.+|.++-..+.+...+ .-+++.||+-||
T Consensus 67 ~l~~~~~~~~~~g~~~~~~v~~g--~--~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~ 138 (138)
T 3idf_A 67 LTQKFSTFFTEKGINPFVVIKEG--E--PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVLIVK 138 (138)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEES--C--HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEecC--C--hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCCCCEEEeC
Confidence 34555666677899988877653 2 2344455444 7898888775544444333 335678888776
No 45
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=92.08 E-value=3.2 Score=32.22 Aligned_cols=68 Identities=12% Similarity=0.128 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh--hhccCCcEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--AANSQILVIRV 78 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv--a~~t~~PVIgv 78 (138)
..+.+.+.+.+++.|. ++.+...+..+++..++++....++++-+|...-.... ..+ ......||+-+
T Consensus 78 ~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~l~~~~iPvV~~ 147 (339)
T 3h5o_A 78 LETLTGIETVLDAAGY--QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE--PFERILSQHALPVVYM 147 (339)
T ss_dssp HHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT--THHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH--HHHHHHhcCCCCEEEE
Confidence 4567788888899885 66778888899999899988888889977765533222 222 23457899876
No 46
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=92.05 E-value=1.1 Score=31.63 Aligned_cols=69 Identities=14% Similarity=0.028 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--------HhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PVIgv 78 (138)
...+++.+.+++.|+++++++.-.+..| ...+++.+++.+++.||.++-..+.+.. -+.-++..||+-|
T Consensus 78 ~~l~~~~~~~~~~g~~~~~~~~v~~G~~--~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVLvV 154 (155)
T 3dlo_A 78 ETLSWAVSIIRKEGAEGEEHLLVRGKEP--PDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSSCH--HHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEEEe
Confidence 3456667777788999887654444444 3456666667789988887654443322 2345678888765
No 47
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=92.02 E-value=0.15 Score=42.72 Aligned_cols=68 Identities=10% Similarity=0.018 Sum_probs=50.0
Q ss_pred HHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcC---CeEEEEecCcCCc-hhHHhhhcc------------------
Q 032570 15 RTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERG---IKIIIVGDGVEAH-LSGVAAANS------------------ 71 (138)
Q Consensus 15 ~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~---~~viIa~AG~~a~-L~gvva~~t------------------ 71 (138)
+.|+.-|+.+.+ .-...+.+.+.+.+.++.+++.+ +++||++-|++.. ++..+|...
T Consensus 71 ~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~ 150 (375)
T 3rf7_A 71 ARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNP 150 (375)
T ss_dssp HHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHHHHHHHHHHHHTSSCSCGGGGCEESCCCSC
T ss_pred HHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCHHHhhccccccCC
Confidence 334444666532 12346778888888888887766 9999999999754 788888765
Q ss_pred CCcEEEecCCC
Q 032570 72 QILVIRVPLLS 82 (138)
Q Consensus 72 ~~PVIgvP~~~ 82 (138)
.+|+|.||+..
T Consensus 151 ~~P~i~IPTTa 161 (375)
T 3rf7_A 151 AVHHIGIPTVS 161 (375)
T ss_dssp CCCEEEEESSC
T ss_pred CCCEEEEcCCC
Confidence 68999999975
No 48
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=91.86 E-value=0.58 Score=31.77 Aligned_cols=67 Identities=10% Similarity=0.075 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHH-HhhhcCCeEEEEecCcCCchhH--------HhhhccCCcEEEe
Q 032570 9 VMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYAL-SAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~~gi-~~~~~V~SaHR~p~~~~~~~~-~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PVIgv 78 (138)
..+++.+.+++.|+ +++..+..- +-..++++ .+++++++.||.++-..+.+.. -+.-+++.||+-|
T Consensus 70 ~l~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlvV 145 (146)
T 3s3t_A 70 AMRQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVIVI 145 (146)
T ss_dssp HHHHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEEEe
Confidence 34555566667788 888777643 33455666 6667789988888654444333 2334678898877
Q ss_pred c
Q 032570 79 P 79 (138)
Q Consensus 79 P 79 (138)
|
T Consensus 146 ~ 146 (146)
T 3s3t_A 146 R 146 (146)
T ss_dssp C
T ss_pred C
Confidence 6
No 49
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=91.80 E-value=3.2 Score=31.24 Aligned_cols=112 Identities=14% Similarity=0.149 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEecCCCCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVPLLSEDW 85 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP~~~~~~ 85 (138)
...+.+.+.+++.|+ ++.+...+..+++..++++....++++-+|........ ...+. .....||+.+=.....
T Consensus 37 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~-~~~~~~~~~~~iPvV~~~~~~~~- 112 (293)
T 2iks_A 37 RIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPE-HPFYQRWANDPFPIVALDRALDR- 112 (293)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTT-CHHHHTTTTSSSCEEEEESCCCT-
T ss_pred HHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc-HHHHHHHHhCCCCEEEECCccCc-
Confidence 456667778888885 56667777788888888888877889988876544332 22222 2346898876332110
Q ss_pred CchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccC------------CHHHHHHHHHHHh
Q 032570 86 SEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKYVE 137 (138)
Q Consensus 86 ~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~------------~~~l~~kl~~~~~ 137 (138)
++ +..|..|+...+...+-.++... .....+|++.|++
T Consensus 113 ------------~~--~~~V~~d~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~ 162 (293)
T 2iks_A 113 ------------EH--FTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRT 162 (293)
T ss_dssp ------------TT--CEEEEECHHHHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHHHH
T ss_pred ------------CC--CCEEEecCHHHHHHHHHHHHHCCCCEEEEEecCcccccHHHHHHHHHH
Confidence 12 34466666555544444444332 2334667777764
No 50
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=91.78 E-value=0.43 Score=38.45 Aligned_cols=73 Identities=16% Similarity=0.104 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc----cCCcEEEecCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN----SQILVIRVPLLS 82 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~----t~~PVIgvP~~~ 82 (138)
....+++...|++.|+++++.... .+....++++++..++++++|+ .|+.+.+--++.+. +..|+..+|.-+
T Consensus 41 ~~~~~~i~~~L~~~g~~~~~~~t~---~~~~a~~~~~~~~~~~~d~vvv-~GGDGTv~~v~~~l~~~~~~~pl~iIP~GT 116 (337)
T 2qv7_A 41 KRELPDALIKLEKAGYETSAYATE---KIGDATLEAERAMHENYDVLIA-AGGDGTLNEVVNGIAEKPNRPKLGVIPMGT 116 (337)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEECC---STTHHHHHHHHHTTTTCSEEEE-EECHHHHHHHHHHHTTCSSCCEEEEEECSS
T ss_pred HHHHHHHHHHHHHcCCeEEEEEec---CcchHHHHHHHHhhcCCCEEEE-EcCchHHHHHHHHHHhCCCCCcEEEecCCc
Confidence 466788999999999877765532 3345556666665567777665 57788888887776 678999999866
Q ss_pred C
Q 032570 83 E 83 (138)
Q Consensus 83 ~ 83 (138)
.
T Consensus 117 ~ 117 (337)
T 2qv7_A 117 V 117 (337)
T ss_dssp C
T ss_pred H
Confidence 4
No 51
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=91.76 E-value=0.93 Score=35.47 Aligned_cols=68 Identities=12% Similarity=0.055 Sum_probs=52.5
Q ss_pred HHHHHHHHHhCC----CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 11 NDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 11 ~~~~~~L~~~gi----~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
+-..+.|++.|. +.++.+..+...+....++++++.++++++||+++--+ .-.+.......||+-+-+
T Consensus 27 ~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t~a--a~a~~~~~~~iPVVf~~v 98 (302)
T 3lkv_A 27 QGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATPT--AQALVSATKTIPIVFTAV 98 (302)
T ss_dssp HHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESHHH--HHHHHHHCSSSCEEEEEE
T ss_pred HHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCCHH--HHHHHhhcCCCCeEEEec
Confidence 345677888775 47888999999999999999999989999999875432 334455667889997744
No 52
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=91.56 E-value=2.1 Score=32.68 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh--------hhccCCcEEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIR 77 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv--------a~~t~~PVIg 77 (138)
+....++..+.|++.|++++..+..- +-...+.+.+++.+++.+|.++-.-+.+...+ ..+++.||+-
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLv 287 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFV 287 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEEE
Confidence 45677888899999999988877643 33455556666778999988887766665543 3467999999
Q ss_pred ecCCC
Q 032570 78 VPLLS 82 (138)
Q Consensus 78 vP~~~ 82 (138)
||...
T Consensus 288 v~~~~ 292 (294)
T 3loq_A 288 CKRGD 292 (294)
T ss_dssp ECSCT
T ss_pred ECCCC
Confidence 99864
No 53
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=91.54 E-value=3.3 Score=30.89 Aligned_cols=70 Identities=14% Similarity=0.059 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.++++|+ ++.+...+..+++..++++++..++++.||............+. .....|||.+=
T Consensus 22 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 22 KAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEec
Confidence 456778888889985 66777788888888888888888889988877554334444443 23578998863
No 54
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=91.52 E-value=1.1 Score=31.54 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--------hhhccCCcEEEecCC
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLL 81 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--------va~~t~~PVIgvP~~ 81 (138)
.++..+.++..|++++..+..- . -...+++.+++.+++.||.++-..+.+... +.-++..||+-||..
T Consensus 89 l~~~~~~~~~~g~~~~~~v~~G--~--~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVlvv~~~ 164 (175)
T 2gm3_A 89 LEFFVNKCHEIGVGCEAWIKTG--D--PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKRN 164 (175)
T ss_dssp HHHHHHHHHHHTCEEEEEEEES--C--HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEEEEECC
T ss_pred HHHHHHHHHHCCCceEEEEecC--C--HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEEEEcCC
Confidence 3444455667899888777642 2 244566666666889877776544443322 334678999999975
Q ss_pred C
Q 032570 82 S 82 (138)
Q Consensus 82 ~ 82 (138)
.
T Consensus 165 ~ 165 (175)
T 2gm3_A 165 A 165 (175)
T ss_dssp G
T ss_pred c
Confidence 3
No 55
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=91.29 E-value=1.8 Score=32.64 Aligned_cols=69 Identities=4% Similarity=-0.017 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
....+.+.+.+++.|. ++.+......+++..++++...+++++-+|........ ..+. .....|||.+=
T Consensus 24 ~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 24 DQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND--PRVQFLLKQKFPFVAFG 94 (287)
T ss_dssp HHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC--HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc--HHHHHHHhcCCCEEEEC
Confidence 3566777888888885 56666666667766777777777889988876543322 2221 23578998763
No 56
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=91.24 E-value=0.23 Score=40.80 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEE---ccCCCchHHHHHHHHhhhcCC---eEEEEecCc-CCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKIL---PPHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~---SaHR~p~~~~~~~~~~~~~~~---~viIa~AG~-~a~L~gvva~--~t~~PVIgvP 79 (138)
+.++..+.|+ +++ + .+. -.+++.+.+.+..+.+.+.++ ++||++-|+ ..-+++++|+ ....|+|.||
T Consensus 42 ~~~~v~~~L~-~~~--~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~ak~~A~~~~rgip~i~IP 117 (348)
T 1ujn_A 42 FAQEVAKALG-VRH--L-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYLRGVAYLAFP 117 (348)
T ss_dssp HHHHHHHHHT-CCC--E-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEE
T ss_pred HHHHHHHHhc-cCe--E-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHhccCCCEEEec
Confidence 5667777776 454 3 333 267888889988877766554 899998775 6779999995 5679999999
Q ss_pred CC
Q 032570 80 LL 81 (138)
Q Consensus 80 ~~ 81 (138)
+.
T Consensus 118 TT 119 (348)
T 1ujn_A 118 TT 119 (348)
T ss_dssp CS
T ss_pred Cc
Confidence 95
No 57
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=91.17 E-value=1.6 Score=33.24 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+...+..++.-.++++...+++++-+|........ ..+. .....|||-+=
T Consensus 29 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~--~~~~~l~~~~iPvV~i~ 98 (295)
T 3hcw_A 29 NVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEND--PIKQMLIDESMPFIVIG 98 (295)
T ss_dssp HHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTTC--HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccCh--HHHHHHHhCCCCEEEEC
Confidence 456677778888885 66677777777777788888888889987776443222 2222 24578998763
No 58
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=91.04 E-value=2.9 Score=31.76 Aligned_cols=68 Identities=7% Similarity=0.047 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+...+..++...++++....++++-+|........ ..+. -....|||.+=
T Consensus 44 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~l~~~~iPvV~i~ 113 (305)
T 3huu_A 44 DVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD--PIEHLLNEFKVPYLIVG 113 (305)
T ss_dssp HHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC--HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc--HHHHHHHHcCCCEEEEC
Confidence 456677778888885 66677777777777888888888889987776543322 2222 24578998764
No 59
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=91.00 E-value=3.2 Score=31.29 Aligned_cols=68 Identities=4% Similarity=-0.087 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH---HHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALS---YALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~---~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.+++.|. ++.+......+++..+ +++....++++-+|....... ...+. .....||+.+-
T Consensus 25 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 25 TILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH--DEDLDELHRMHPKMVFLN 97 (290)
T ss_dssp HHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC--HHHHHHHHHHCSSEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC--HHHHHHHhhcCCCEEEEc
Confidence 455667777888886 5666777777777777 788777788998887654433 22222 23578998763
No 60
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=90.96 E-value=0.051 Score=44.84 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=44.6
Q ss_pred eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc-CCchhHHhhhccCCcEEEecCCC
Q 032570 24 YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 24 ~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~-~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
+++.+.+-+.+.+.+.+..+.+++ ++++||++-|+ ..-+++++|....+|+|.||+..
T Consensus 70 ~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPTTa 128 (376)
T 1kq3_A 70 VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKTLDTAKAVAYKLKKPVVIVPTIA 128 (376)
T ss_dssp EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 344455555555577777777766 89999999886 55699999988999999999974
No 61
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=90.93 E-value=3.3 Score=31.26 Aligned_cols=67 Identities=6% Similarity=-0.019 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh-ccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~-~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+...+..++ -.++++....++++-+|........ ..+.. ....|||-+=
T Consensus 28 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~~~~~iPvV~i~ 95 (289)
T 3k9c_A 28 DLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGTRFDT--DELGALADRVPALVVA 95 (289)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETCCCCH--HHHHHHHTTSCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECCCCCH--HHHHHHHcCCCEEEEc
Confidence 456677788889985 666666666666 5667777777889988877654433 22221 1278998763
No 62
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=90.90 E-value=3.4 Score=31.97 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh--hhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--AANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv--a~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+...+..+++-.++++....++++-+|........ ..+. ......||+-+=
T Consensus 80 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~~~~iPvV~~~ 150 (338)
T 3dbi_A 80 ELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV-DEIDDIIDAHSQPIMVLN 150 (338)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH-HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh-HHHHHHHHcCCCCEEEEc
Confidence 456777788888885 66777788888888888888888889988776543332 2222 233568988763
No 63
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=90.75 E-value=3.8 Score=30.14 Aligned_cols=69 Identities=9% Similarity=0.105 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.++++|. ++.+...+..+++..++++...+++++-+|........ ...+. .....|||.+=
T Consensus 19 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~~~~iPvV~~~ 89 (272)
T 3o74_A 19 RIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPE-DDSYRELQDKGLPVIAID 89 (272)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSS-CCHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-HHHHHHHHHcCCCEEEEc
Confidence 456667778888886 56667788888888888888888889988876654222 12221 23578998753
No 64
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=90.69 E-value=2.6 Score=31.75 Aligned_cols=68 Identities=6% Similarity=0.018 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.++++|. ++.+......++...++.+...+++++-||........ ..+. -....|||.+=
T Consensus 27 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 27 QMVFGITEVLSTTQY--HLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND--PRVRFMTERNMPFVTHG 96 (288)
T ss_dssp HHHHHHHHHHTTSSC--EEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC--HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc--HHHHHHhhCCCCEEEEC
Confidence 445666677777775 66677776666666666666666788977766433221 2222 23578998754
No 65
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=90.53 E-value=4.6 Score=30.75 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEc-cCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~S-aHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.++++|+ ++.+.. .+..+++..++++.+..++++.||........+...+. .....|||.+=
T Consensus 17 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 17 QVEQGVKAAGKALGV--DTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp HHHHHHHHHHHHHTC--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeC
Confidence 345666777888986 455543 36678887788888877889988887655554434443 23578999763
No 66
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=90.41 E-value=1.3 Score=33.63 Aligned_cols=66 Identities=9% Similarity=0.023 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|. ++.+...+..+++..++++....++++-+|........ .+. .....|||.+
T Consensus 31 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~---~~~~~~~~~iPvV~~ 98 (301)
T 3miz_A 31 DIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVTMYRRI---VDPESGDVSIPTVMI 98 (301)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEEEEEEE---CCCCCTTCCCCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEecCCccH---HHHHHHhCCCCEEEE
Confidence 577888889999985 66677788888888888888888889977765433222 221 2346788765
No 67
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=90.37 E-value=0.34 Score=30.37 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
+.=+.|+++...|+++|++|+..-...+..+....++.+
T Consensus 12 ~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~ 50 (89)
T 3msz_A 12 NGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMN 50 (89)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHH
Confidence 445899999999999999998877666655555555543
No 68
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=90.06 E-value=4.9 Score=30.34 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
.+.+.+.+.++++|+ ++.+.... ..+++..+.++++..++++.||........+...+.- ....|||.+=.
T Consensus 20 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 20 SLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 345666777888885 56666655 6888888888888888899888876666665655532 35789997643
No 69
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=89.99 E-value=2.5 Score=29.07 Aligned_cols=68 Identities=18% Similarity=0.082 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHHH-hhhcCCeEEEEecCcCCch-------hHHhhhccCCcEEEec
Q 032570 9 VMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALS-AKERGIKIIIVGDGVEAHL-------SGVAAANSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi-~~~~~V~SaHR~p~~~~~~~~~-~~~~~~~viIa~AG~~a~L-------~gvva~~t~~PVIgvP 79 (138)
..++..+.+++.|+ +++..+.... +-..++++. +++++++.||.++-....+ +.-+.-+++.||+-||
T Consensus 80 ~l~~~~~~~~~~g~~~~~~~v~~~g---~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVlvV~ 156 (156)
T 3fg9_A 80 VVAEYVQLAEQRGVNQVEPLVYEGG---DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVIVVR 156 (156)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEECS---CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCC---CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEEEeC
Confidence 34555566677899 4887776522 233445555 5567899888877543332 2234456788988776
No 70
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=89.91 E-value=4.1 Score=30.51 Aligned_cols=66 Identities=8% Similarity=0.093 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC--chhHHhhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVAAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a--~L~gvva~~t~~PVIgvP 79 (138)
...+.+.+.+++.|+ ++.+......+++..++++....++++.+|....... .+.-. ...|||.+-
T Consensus 24 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l----~~iPvV~~~ 91 (288)
T 2qu7_A 24 EVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPVKSKFQMKREW----LKIPIMTLD 91 (288)
T ss_dssp HHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCSSSCCCCCGGG----GGSCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecCCCChHHHHHh----cCCCEEEEe
Confidence 355666777888886 5555666677787778888887788998777654432 22221 567888763
No 71
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=89.71 E-value=3.6 Score=31.14 Aligned_cols=110 Identities=14% Similarity=0.127 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEecCCCCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVPLLSEDW 85 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP~~~~~~ 85 (138)
.+.+.+.+.+++.|.. +.+...+. +++..++++....++++-+|........ ..+. .....|||.+=....
T Consensus 27 ~~~~gi~~~a~~~g~~--~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~l~~~~iPvV~~~~~~~-- 99 (294)
T 3qk7_A 27 EMISWIGIELGKRGLD--LLLIPDEP-GEKYQSLIHLVETRRVDALIVAHTQPED--FRLQYLQKQNFPFLALGRSHL-- 99 (294)
T ss_dssp HHHHHHHHHHHHTTCE--EEEEEECT-TCCCHHHHHHHHHTCCSEEEECSCCSSC--HHHHHHHHTTCCEEEESCCCC--
T ss_pred HHHHHHHHHHHHCCCE--EEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCCCh--HHHHHHHhCCCCEEEECCCCC--
Confidence 4566777788888864 44444443 5555666666667788877776554333 2222 235689987633211
Q ss_pred CchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccC------------CHHHHHHHHHHHh
Q 032570 86 SEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKYVE 137 (138)
Q Consensus 86 ~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~------------~~~l~~kl~~~~~ 137 (138)
..++..|.+|+-..+-..+-.++... .....+|++.|++
T Consensus 100 -------------~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~ 150 (294)
T 3qk7_A 100 -------------PKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQ 150 (294)
T ss_dssp -------------SSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHHH
T ss_pred -------------CCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcccchHHHHHHHHHH
Confidence 12244566666554444444443332 2234567777764
No 72
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.66 E-value=0.82 Score=31.04 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=44.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCC
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSE 83 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~ 83 (138)
++-=|+|++++..|+++|++|+..=..-|..+.++.+.++.. .+..+.|+|-+ .+.
T Consensus 24 ~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~----------------------~g~~tvP~vfi--~g~ 79 (114)
T 3h8q_A 24 KSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEI----------------------TNQKTVPNIFV--NKV 79 (114)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHH----------------------HSCCSSCEEEE--TTE
T ss_pred cCCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHH----------------------hCCCccCEEEE--CCE
Confidence 344589999999999999999877666665555555544211 13467777754 444
Q ss_pred CCCchh-hhhhhc
Q 032570 84 DWSEDD-VINSIR 95 (138)
Q Consensus 84 ~~~G~d-LlS~lq 95 (138)
-++|.| +..+.+
T Consensus 80 ~igG~d~l~~l~~ 92 (114)
T 3h8q_A 80 HVGGCDQTFQAYQ 92 (114)
T ss_dssp EEESHHHHHHHHH
T ss_pred EEeCHHHHHHHHH
Confidence 467777 655443
No 73
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=89.50 E-value=4.4 Score=30.20 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhHHhhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~gvva~~t~~PVIgvP 79 (138)
...+.+.+.+++.|. ++.+......+++..++++...+++++.+|....... .+-..+......|||.+-
T Consensus 24 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~~iPvV~~~ 94 (289)
T 1dbq_A 24 EIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMD 94 (289)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHHTTTSCEEEEE
T ss_pred HHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccCCHHHHHHHHhccCCCEEEEc
Confidence 355667777888885 5566677778888888888887788998887655432 233333323578998763
No 74
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=89.44 E-value=5 Score=31.11 Aligned_cols=69 Identities=9% Similarity=0.097 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~gvva~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||....... .+-..+......||+.+
T Consensus 75 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~~~~~iPvV~~ 144 (340)
T 1qpz_A 75 EIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVM 144 (340)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHTTTTSCEEEE
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHhhCCCCEEEE
Confidence 355667777888885 5666777778888878888887788998777644322 23233332256888865
No 75
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=89.42 E-value=3.8 Score=30.81 Aligned_cols=66 Identities=12% Similarity=0.111 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC--chhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a--~L~gvva~~t~~PVIgv 78 (138)
...+.+.+.+++.|. ++.+......+++..++++...+++++-+|....... .+. .+. ...||+.+
T Consensus 25 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~-~l~--~~iPvV~~ 92 (285)
T 3c3k_A 25 AVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQ-NII--GAFPWVQC 92 (285)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGGHHHHH-HHH--TTSSEEEE
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCChHHHH-HHh--cCCCEEEE
Confidence 456677778888885 5556666777777778888887788998887654321 122 122 67899876
No 76
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=89.40 E-value=5.2 Score=29.69 Aligned_cols=68 Identities=9% Similarity=0.044 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hc-cCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--AN-SQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~-t~~PVIgvP 79 (138)
...+.+.+.+++.|+ ++.+......+++..++++....++++.+|........ ..+. .. ...|||.+-
T Consensus 38 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~--~~~~~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 38 ELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV--DEIDDIIDAHSQPIMVLN 108 (296)
T ss_dssp HHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSCH--HHHHHHHHTCSSCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCh--HHHHHHHhcCCCCEEEEc
Confidence 456677778888886 56667777788887888888877889988876543221 2222 22 578998763
No 77
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=89.26 E-value=5.7 Score=29.89 Aligned_cols=71 Identities=8% Similarity=0.069 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEE-EccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V-~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
...+.+.+.++++|+ ++.+ ...+..+++..++++.+..++++.||........+...+.- ....|||.+-.
T Consensus 21 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 21 RCLKGFEDAAQALNV--TVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHHcCC--EEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 456677778888886 4455 46788888888888888888899888876655555555532 35789987643
No 78
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=89.03 E-value=4.7 Score=29.78 Aligned_cols=67 Identities=7% Similarity=0.030 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
...+.+.+.+++.|. ++.+......+++..++++....++++-+|....... ...+. .....||+.+
T Consensus 20 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~--~~~~~~l~~~~iPvV~~ 88 (275)
T 3d8u_A 20 HFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS--QRTHQLLEASNTPVLEI 88 (275)
T ss_dssp HHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCCC--HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCC--HHHHHHHHhCCCCEEEE
Confidence 355666777888886 4555566677777778888887788887776554322 12222 2357899886
No 79
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=89.01 E-value=4.3 Score=29.86 Aligned_cols=71 Identities=14% Similarity=0.115 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEc--cCCCchHHHHHHHHhhhcC-CeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERG-IKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~S--aHR~p~~~~~~~~~~~~~~-~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
...+.+.+.++++|+. +.+.. .+..+++..+.+++..+++ ++.||...-........+.- ....||+.+-.
T Consensus 17 ~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~ 92 (276)
T 3ksm_A 17 QVYLGAQKAADEAGVT--LLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDS 92 (276)
T ss_dssp HHHHHHHHHHHHHTCE--EEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHHcCCE--EEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEec
Confidence 4567778888899874 44554 5678888888888887778 99888876544444444433 35789998743
No 80
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=88.84 E-value=0.36 Score=39.46 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=43.9
Q ss_pred cCCCchHHHHHHHHhhhcCC---eEEEEecCc-CCchhHHhh--hccCCcEEEecCC
Q 032570 31 PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVAA--ANSQILVIRVPLL 81 (138)
Q Consensus 31 aHR~p~~~~~~~~~~~~~~~---~viIa~AG~-~a~L~gvva--~~t~~PVIgvP~~ 81 (138)
.|++.+.+.+..+.+.+.++ ++||++-|+ ..-+++++| .....|+|.||+.
T Consensus 64 ~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~~A~~~~rgip~i~IPTT 120 (343)
T 3clh_A 64 KYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTT 120 (343)
T ss_dssp GGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEECS
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCceEEEECChHHHHHHHHHHHHhccCCCEEEeCCc
Confidence 57788999999988888788 999999886 567999999 4678999999998
No 81
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=88.55 E-value=7.1 Score=30.11 Aligned_cols=68 Identities=9% Similarity=0.065 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.+++.|. ++.+...+..+++..++++....++++-+|....... ...+. .....||+.+-
T Consensus 80 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~l~~~~iPvV~~~ 149 (332)
T 2o20_A 80 AITRGVDDIASMYKY--NMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLD--EKIRTSLKNSRTPVVLVG 149 (332)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCCC--HHHHHHHHHHCCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHHHhCCCCEEEEc
Confidence 455667777888885 5666677778887778888887788998877654222 12222 13568988763
No 82
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=88.33 E-value=6.3 Score=29.27 Aligned_cols=70 Identities=14% Similarity=0.080 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC---chhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA---HLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a---~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|+ ++.+...+..+++..++++.+.+++++-+|.....+. .....+. .....|||.+=
T Consensus 32 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 32 SIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEe
Confidence 566778888888886 6667788888888888988888889998887655432 2223332 23578998763
No 83
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=88.16 E-value=6.1 Score=29.52 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCC--CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc-cCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN-SQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR--~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~-t~~PVIgv 78 (138)
.+.+.+.+.++++|+ ++.+...+. .+++-.++++.+..++++.||........+...+.-. ...|||.+
T Consensus 22 ~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~iPvV~~ 93 (304)
T 3o1i_D 22 SVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWVGNTPVFAT 93 (304)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHTTTSCEEEC
T ss_pred HHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHcCCCCEEEe
Confidence 345667777888885 677777777 8888888888888888998888766655444444322 57899876
No 84
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=88.11 E-value=5.7 Score=31.02 Aligned_cols=67 Identities=6% Similarity=0.059 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|. ++.+...+..+++..++++....++++-+|........ ..+. ....+||+-+
T Consensus 87 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~--~~~~~l~~~~iPvV~i 155 (355)
T 3e3m_A 87 QTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTE--QTIRLLQRASIPIVEI 155 (355)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCH--HHHHHHHHCCSCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCH--HHHHHHHhCCCCEEEE
Confidence 356677778888885 66777888889988888888888889977776443221 2222 2457899976
No 85
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=87.73 E-value=2.4 Score=28.52 Aligned_cols=65 Identities=20% Similarity=0.208 Sum_probs=39.8
Q ss_pred HHHHHHHHH----hCC-CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchh-----HH---hhhccCCcEEE
Q 032570 11 NDAARTLSD----FGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIR 77 (138)
Q Consensus 11 ~~~~~~L~~----~gi-~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~-----gv---va~~t~~PVIg 77 (138)
+++.+.|++ .|+ +++..+.. . +-...+++.+++.+++.||.++-..+.+. ++ +.-++..||+-
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 135 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLE--G--VPAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVLL 135 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEE--S--SHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEe--c--CHHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEEE
Confidence 344455544 788 88777653 2 23345566666778998888765433332 22 33467889987
Q ss_pred ec
Q 032570 78 VP 79 (138)
Q Consensus 78 vP 79 (138)
||
T Consensus 136 v~ 137 (137)
T 2z08_A 136 VR 137 (137)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 86
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=87.62 E-value=5 Score=31.44 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|.. +.++..+..+++..++++....++++-||....... ...+. .....||+.+=
T Consensus 83 ~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~l~~~~iPvV~i~ 152 (348)
T 3bil_A 83 AMVTEIQSTASKAGLA--TIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC--ANQLEDLQKQGMPVVLVD 152 (348)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG--HHHHHHHHHC-CCEEEES
T ss_pred HHHHHHHHHHHHcCCE--EEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC--hHHHHHHHhCCCCEEEEc
Confidence 4566777788888864 555666777777778888887778887776543322 12222 23568988763
No 87
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=87.39 E-value=3.5 Score=31.78 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEE-ccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~-SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
..+.+.+.++++|+ ++.+. .....+++-.+.++++..++++.||...-....+..++.- ....|||.+-
T Consensus 21 ~~~g~~~~~~~~g~--~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d 92 (316)
T 1tjy_A 21 GGNGAQEAGKALGI--DVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWD 92 (316)
T ss_dssp HHHHHHHHHHHHTC--EEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHhCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEec
Confidence 34555667778884 66665 4677888888888888888999988877666666665532 3578999873
No 88
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=87.15 E-value=2 Score=27.35 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC---CCchHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPH---QNCKEALSYA 42 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaH---R~p~~~~~~~ 42 (138)
-=++|+++++.|++.|++|+..=...+ ..++...++.
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~ 52 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELL 52 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHH
Confidence 447899999999999999987655432 3445444444
No 89
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=86.70 E-value=2.9 Score=28.39 Aligned_cols=62 Identities=15% Similarity=0.111 Sum_probs=36.8
Q ss_pred HHHHhCCCe-EEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch-------hHHhhhccCCcEEEecCC
Q 032570 16 TLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-------SGVAAANSQILVIRVPLL 81 (138)
Q Consensus 16 ~L~~~gi~~-~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L-------~gvva~~t~~PVIgvP~~ 81 (138)
.++++|++. +..+..- . -...+++.+++.+++.||.++-..+.+ +--+.-++..||+-||..
T Consensus 79 ~~~~~~~~~~~~~~~~g--~--~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~~~ 148 (150)
T 3tnj_A 79 IGNTLGIDPAHRWLVWG--E--PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVLAVRLR 148 (150)
T ss_dssp HHHHHTCCGGGEEEEES--C--HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEEEEECC
T ss_pred HHHHcCCCcceEEEecC--C--HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEEEEeCC
Confidence 344678884 5555432 2 234556666667899888776543333 223345789999999875
No 90
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=86.57 E-value=5.1 Score=30.05 Aligned_cols=68 Identities=15% Similarity=0.108 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEE-ccCCCchHHHHHHHHhhhcCCeEEEEecCcCC--chhHHhhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVAAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~-SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a--~L~gvva~~t~~PVIgvP 79 (138)
...+.+.+.+++.|+ ++.+. .....+++..++++....++++-+|....... .+.- + .....||+.+-
T Consensus 25 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~-l-~~~~iPvV~~~ 95 (290)
T 3clk_A 25 QILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTDDNLQL-L-QSSDVPYCFLS 95 (290)
T ss_dssp HHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEESCC----CHHH-H-HCC--CEEEES
T ss_pred HHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCHHHHHH-H-HhCCCCEEEEc
Confidence 456667778888885 55566 55566666666777777778897776654322 2221 1 23568888763
No 91
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=86.48 E-value=10 Score=29.64 Aligned_cols=68 Identities=7% Similarity=0.104 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC-cCCchhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG-VEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG-~~a~L~gvva~~t~~PVIgv 78 (138)
.+.+-+.+.++++|+ ++.++..+.. ....+.++.+.+++++.||.... ....+--+.......|++-|
T Consensus 24 ~~~~Gi~~~~~~~g~--~~~~~~~~~~-~~~~~~l~~l~~~~~dgIi~~~~~~~~~~~~~a~~~p~~p~v~i 92 (318)
T 2fqx_A 24 QVWEGISRFAQENNA--KCKYVTASTD-AEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVI 92 (318)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECCSG-GGHHHHHHHHHHTTCSEEEEESTTTHHHHHHHHHHCTTSCEEEE
T ss_pred HHHHHHHHHHHHhCC--eEEEEeCCCH-HHHHHHHHHHHHcCCCEEEECChhHHHHHHHHHHHCCCCEEEEE
Confidence 345566677788985 5555554433 44456778887788998888643 33333333222346788876
No 92
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=86.13 E-value=8.7 Score=28.59 Aligned_cols=70 Identities=14% Similarity=0.102 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+......+++..++++....++++.+|........+...+. .....||+.+-
T Consensus 19 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~ 90 (290)
T 2fn9_A 19 VLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVD 90 (290)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEe
Confidence 455667777888886 55666667778887788888777889988877655444333332 23578998763
No 93
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=86.01 E-value=4.4 Score=31.53 Aligned_cols=62 Identities=11% Similarity=0.045 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|. ++.+...+. +++..++++....++++-+|.... +- -......||+-+
T Consensus 81 ~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~----~~--~~~~~~iPvV~~ 142 (333)
T 3jvd_A 81 ESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV----VG--SIAPEGIPMVQL 142 (333)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC----TT--CCC-CCSCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch----HH--HHhhCCCCEEEE
Confidence 456677788888885 666777777 888888888887788897777554 11 112346788765
No 94
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=85.94 E-value=8.5 Score=28.94 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|. ++.+......+++..++++...+++++-+|....... ...+. .....|||.+-
T Consensus 33 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~~~l~~~~iPvV~~~ 102 (289)
T 2fep_A 33 ELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT--DEHVAEFKRSPVPIVLAA 102 (289)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCC--HHHHHHHHHSSSCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCCC--HHHHHHHHhcCCCEEEEc
Confidence 455667777888886 5556667777887788888887888998877654222 22222 23578998763
No 95
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=85.80 E-value=9 Score=28.44 Aligned_cols=67 Identities=12% Similarity=0.144 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
...+.+.+.+++.|+ ++.+...+..+++..++++...+++++-||...... ...+.- ....|||.+=
T Consensus 24 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~---~~~~~~l~~~~iPvV~i~ 92 (276)
T 3jy6_A 24 ELFKGISSILESRGY--IGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN---PQTVQEILHQQMPVVSVD 92 (276)
T ss_dssp HHHHHHHHHHHTTTC--EEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC---HHHHHHHHTTSSCEEEES
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc---HHHHHHHHHCCCCEEEEe
Confidence 455667777788875 677788888888888888888888899888776554 444433 3578998763
No 96
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=85.76 E-value=2.8 Score=33.21 Aligned_cols=72 Identities=13% Similarity=0.041 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc----cCCcEEEecCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN----SQILVIRVPLLS 82 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~----t~~PVIgvP~~~ 82 (138)
....+++...|++.|+++++... ..+....++++++.+ +++++|+ .|+.+.|--++.++ +..|+-.+|.-+
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t---~~~~~a~~~~~~~~~-~~d~vv~-~GGDGTl~~v~~~l~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHT---KEQGDATKYCQEFAS-KVDLIIV-FGGDGTVFECTNGLAPLEIRPTLAIIPGGT 99 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEC---CSTTHHHHHHHHHTT-TCSEEEE-EECHHHHHHHHHHHTTCSSCCEEEEEECSS
T ss_pred HHHHHHHHHHHHHcCCeEEEEEc---cCcchHHHHHHHhhc-CCCEEEE-EccchHHHHHHHHHhhCCCCCcEEEecCCc
Confidence 35678899999999998877653 345667777776643 6776554 57788888777765 457787888865
Q ss_pred C
Q 032570 83 E 83 (138)
Q Consensus 83 ~ 83 (138)
.
T Consensus 100 ~ 100 (304)
T 3s40_A 100 C 100 (304)
T ss_dssp C
T ss_pred H
Confidence 4
No 97
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=85.55 E-value=3.9 Score=27.44 Aligned_cols=65 Identities=14% Similarity=0.195 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCCCe---EEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--------HhhhccCCcEEE
Q 032570 9 VMNDAARTLSDFGVPY---EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIR 77 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~---~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PVIg 77 (138)
..+++.+.++..|+++ +..+..- +-...+++.+++.+++.+|.++-....+.. -+.-+++.||+-
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 146 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGG----RPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVLV 146 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEES----CHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhcCCCccceEEEEecC----CHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEEE
Confidence 4556666777889988 7776643 233456666667789988887654333322 223456777764
No 98
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=85.36 E-value=11 Score=28.96 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcC--CeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG--IKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~--~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
...+.+.+.+++.|+. +.+......+++..++++.+.+++ ++.||........+...+.- ....||+.+-.
T Consensus 22 ~~~~gi~~~a~~~g~~--l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 96 (332)
T 2rjo_A 22 AFNKGAQSFAKSVGLP--YVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWN 96 (332)
T ss_dssp HHHHHHHHHHHHHTCC--EEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHcCCE--EEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECC
Confidence 4556677788889875 555667777887778888877777 99888765544333333322 35789988743
No 99
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=85.34 E-value=5.2 Score=30.48 Aligned_cols=72 Identities=14% Similarity=0.042 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--------HhhhccCCcEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRV 78 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PVIgv 78 (138)
....+++.+.++..|++++..+...+.. ...+++.+++++++.+|...-..+.+.. -+.-++..||+-|
T Consensus 50 ~~~l~~~~~~~~~~~~~~~~~~~~~g~~---~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVlvv 126 (290)
T 3mt0_A 50 SAALNDLAQELREEGYSVSTNQAWKDSL---HQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMT 126 (290)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECSSSH---HHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHhhCCCeEEEEEEeCCCH---HHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCCCCEEEe
Confidence 4567788888889999999888633222 3344455556678988887655443332 2345689999999
Q ss_pred cCC
Q 032570 79 PLL 81 (138)
Q Consensus 79 P~~ 81 (138)
|..
T Consensus 127 ~~~ 129 (290)
T 3mt0_A 127 KTA 129 (290)
T ss_dssp CCC
T ss_pred cCC
Confidence 954
No 100
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=85.24 E-value=11 Score=28.96 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
...+.+.+.+++.|. ++.+...+..+++..++++....++++-+| ....... -.+ .....||+.+
T Consensus 77 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~~~~~~--~~l-~~~~iPvV~~ 141 (330)
T 3ctp_A 77 QMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTYLEVLQSHRVAGII-ASRSQCE--DEY-ANIDIPVVAF 141 (330)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEE-EETCCCS--GGG-TTCCSCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEE-ECCCCCH--HHH-HhcCCCEEEE
Confidence 355667777888886 555666777788878888888778899888 5433221 122 2456788875
No 101
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=85.18 E-value=9.7 Score=28.25 Aligned_cols=69 Identities=19% Similarity=0.353 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
.+.+.+.+.+++.| |++.+...+..+++-.++++....++++-+|........+...+. .....||+-+
T Consensus 18 ~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 18 SLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITL 88 (271)
T ss_dssp HHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHcC--cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEe
Confidence 45667777888888 466677777777777778888877889988876544444333332 2356899876
No 102
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=84.56 E-value=3.6 Score=31.58 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch-----hH---HhhhccCCcEEEecCCC
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SG---VAAANSQILVIRVPLLS 82 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L-----~g---vva~~t~~PVIgvP~~~ 82 (138)
+++.+.++.-|++++..+...... ...+++.+++++++.||.+.-....+ ++ -+.-++..||+-||...
T Consensus 76 ~~~~~~~~~~~v~~~~~~~~~g~~---~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~~~~ 152 (319)
T 3olq_A 76 KQQARYYLEAGIQIDIKVIWHNRP---YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVWMVKDKE 152 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSCH---HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEEEEESSC
T ss_pred HHHHHHHhhcCCeEEEEEEecCCh---HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEEEecCcc
Confidence 334444455699988887633322 33444555556788777766443333 22 24467899999999753
No 103
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=84.53 E-value=11 Score=28.11 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHh-CCCeEEEEE-ccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDF-GVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~-gi~~~~~V~-SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
.+.+.+.+.+++. |....+... ..+..+++..++++....++++-||............+.- ....|||.+-.
T Consensus 26 ~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 26 DVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp HHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 4566677788888 777676655 3567888888888888888899888876555444444432 35789987654
No 104
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=84.34 E-value=11 Score=28.01 Aligned_cols=70 Identities=11% Similarity=0.206 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc--CCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP--HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa--HR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
...+.+.+.+++.|. ++.+... +..+++..++++....++++.+|........+...+.- ....|||.+=
T Consensus 24 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~ 97 (289)
T 3brs_A 24 VLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVID 97 (289)
T ss_dssp HHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEEC
Confidence 345666777888885 5666555 67778878888888778899888876655554344432 3568998763
No 105
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=83.65 E-value=7.7 Score=29.03 Aligned_cols=72 Identities=8% Similarity=-0.012 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
...+.+.+.++++|. +++.+...+..+++..++++.+.+++++.||............+.- ....|||.+-.
T Consensus 19 ~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 92 (309)
T 2fvy_A 19 VVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNK 92 (309)
T ss_dssp HHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESS
T ss_pred HHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecC
Confidence 455667777888885 3677777777888888888888788899888766544444344332 35689987643
No 106
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=83.44 E-value=8.2 Score=29.89 Aligned_cols=67 Identities=10% Similarity=0.036 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
.+.+.+.+.++++|. ++.+...+..+++..++++....++++-+|...-.... ..+. .....||+-+
T Consensus 85 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~--~~~~~l~~~~iPvV~i 153 (344)
T 3kjx_A 85 EVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSE--AARAMLDAAGIPVVEI 153 (344)
T ss_dssp HHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCH--HHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCH--HHHHHHHhCCCCEEEE
Confidence 456677777888875 56677888899998899988888889977776433222 2222 2457899876
No 107
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=83.37 E-value=4.5 Score=27.03 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=33.7
Q ss_pred CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 23 PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 23 ~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
+++..+.. - +-...+++.+++.+++.||.++-.. ..+.-+.-++..||+-||
T Consensus 87 ~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~g~-sv~~~vl~~a~~PVlvv~ 138 (138)
T 1q77_A 87 IPGVEYRI--G--PLSEEVKKFVEGKGYELVVWACYPS-AYLCKVIDGLNLASLIVK 138 (138)
T ss_dssp CCCEEEEC--S--CHHHHHHHHHTTSCCSEEEECSCCG-GGTHHHHHHSSSEEEECC
T ss_pred cceEEEEc--C--CHHHHHHHHHHhcCCCEEEEeCCCC-chHHHHHHhCCCceEeeC
Confidence 56666543 2 3344566767777899888865433 445555567889998776
No 108
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=83.16 E-value=10 Score=28.29 Aligned_cols=65 Identities=6% Similarity=0.113 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
.+.+.+.+.++++|. + +.+...+..+++-.++++....++++-+|... ..+-- ......||+.+=
T Consensus 27 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~---~~~~~--~~~~~iPvV~~~ 92 (277)
T 3hs3_A 27 QIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA---FTIPP--NFHLNTPLVMYD 92 (277)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC---CCCCT--TCCCSSCEEEES
T ss_pred HHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc---hHHHH--HHhCCCCEEEEc
Confidence 456677778888885 6 67788888898888888888888899888776 22211 123467887653
No 109
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=82.77 E-value=14 Score=28.27 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgv 78 (138)
...+.+.+.+++.|..+.+.++..+ ..+++-.++++.+..++++.||. .+........+.- ....||+.+
T Consensus 61 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi-~~~~~~~~~~~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 61 RNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIF-TLDTTRHRKFVEHVLDSTNTKLIL 134 (342)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEE-CCSSSTTHHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEE-eCChHhHHHHHHHHHHcCCCEEEE
Confidence 4567778888999988777765566 57777777888887788998887 5554433333322 246788755
No 110
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=82.58 E-value=7.7 Score=29.18 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEc--cCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~S--aHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgv 78 (138)
.+.+.+.+.+++.|+ ++.+.+ .+..+++-.++++....++++-+|........+...+.- ....||+-+
T Consensus 18 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 90 (288)
T 1gud_A 18 DMKKGIEDEAKTLGV--SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNL 90 (288)
T ss_dssp HHHHHHHHHHHHHTC--CEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCC--EEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEE
Confidence 345667778888995 556666 677888878888888777899888766544443333322 246899876
No 111
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=81.65 E-value=9.3 Score=25.41 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=39.0
Q ss_pred HHHHHhCCCe-EEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH---H---hhhccCCcEEEecCC
Q 032570 15 RTLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG---V---AAANSQILVIRVPLL 81 (138)
Q Consensus 15 ~~L~~~gi~~-~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g---v---va~~t~~PVIgvP~~ 81 (138)
+.++++|+++ +..+..- +-...+++.+++.+++.||.++- .+.+.. + +.-++..||+-||..
T Consensus 71 ~~~~~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dliV~G~~-~~~~~~lgs~~~~vl~~~~~pVlvv~~~ 139 (141)
T 1jmv_A 71 DLAESVDYPISEKLSGSG----DLGQVLSDAIEQYDVDLLVTGHH-QDFWSKLMSSTRQVMNTIKIDMLVVPLR 139 (141)
T ss_dssp HHHHHSSSCCCCEEEEEE----CHHHHHHHHHHHTTCCEEEEEEC-CCCHHHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHcCCCceEEEEecC----CHHHHHHHHHHhcCCCEEEEeCC-CchhhhhcchHHHHHhcCCCCEEEeeCC
Confidence 3445678886 4444421 23345556666778999888877 555543 2 234678999999864
No 112
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=81.30 E-value=16 Score=27.93 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHh-CCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~-gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
+.+.+.+.+++. |+ ++.+...+..++...++++....++++.||........+...+.- ....|||.+-
T Consensus 23 ~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 23 MNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVD 94 (325)
T ss_dssp HHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeC
Confidence 445566666676 65 666777777888888888888778899888765443333333322 3568999873
No 113
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=81.05 E-value=11 Score=28.53 Aligned_cols=69 Identities=19% Similarity=0.201 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
..+.+.+.++++|+ ++.+......+++..++++.+..++++-||........+...+.- ....||+.+-
T Consensus 20 ~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 90 (306)
T 2vk2_A 20 ETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLD 90 (306)
T ss_dssp HHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEec
Confidence 45567778888986 566666777888878888888777899888765544443334332 3568998764
No 114
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=81.04 E-value=13 Score=27.56 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-ch-----h---HHhhhccCCcEEEecC
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HL-----S---GVAAANSQILVIRVPL 80 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L-----~---gvva~~t~~PVIgvP~ 80 (138)
.+++.+.++..|++++..+..- .| ...+++. +++++.||.++-..+ .+ + .-+.-++..||+-||.
T Consensus 76 l~~~~~~~~~~g~~~~~~~~~g--~~--~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~~PVlvv~~ 149 (268)
T 3ab8_A 76 LERVRQSALAAGVAVEAVLEEG--VP--HEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPG 149 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEE--CH--HHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCSSCEEEECS
T ss_pred HHHHHHHHHhCCCCeEEEEecC--CH--HHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCCCCEEEECC
Confidence 3444555666799988877532 22 2334443 567898887764433 32 2 2234578999999997
Q ss_pred CC
Q 032570 81 LS 82 (138)
Q Consensus 81 ~~ 82 (138)
..
T Consensus 150 ~~ 151 (268)
T 3ab8_A 150 EP 151 (268)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 115
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=80.96 E-value=4.4 Score=32.49 Aligned_cols=73 Identities=18% Similarity=0.251 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc------cCCcEEEecCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN------SQILVIRVPLL 81 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~------t~~PVIgvP~~ 81 (138)
...+++.+.|++.|+++++.... .+....++.+++..++++++|+ .|+.+.+-.++.+. +..|+-.+|.-
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv-~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIA-GGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEE-EESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred chHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEE-EccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 56778889999999988776543 2344556665554456776654 57788888877765 45687778886
Q ss_pred CCC
Q 032570 82 SED 84 (138)
Q Consensus 82 ~~~ 84 (138)
+.+
T Consensus 120 t~N 122 (332)
T 2bon_A 120 TAN 122 (332)
T ss_dssp SSC
T ss_pred CHH
Confidence 543
No 116
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=80.89 E-value=10 Score=25.25 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc----hh---HHhhhccCCcEEEec
Q 032570 11 NDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH----LS---GVAAANSQILVIRVP 79 (138)
Q Consensus 11 ~~~~~~L~~~gi~---~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~----L~---gvva~~t~~PVIgvP 79 (138)
++..+.++++|++ ++..+..- +-...+++.+++.+++.||.++-+++. ++ .-+.-++..||+-||
T Consensus 69 ~~l~~~~~~~~~~~~~v~~~~~~g----~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~~~pVlvv~ 143 (143)
T 3fdx_A 69 TQLKEIAKKFSIPEDRMHFHVAEG----SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR 143 (143)
T ss_dssp HHHHHHHTTSCCCGGGEEEEEEES----CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHHcCCCCCceEEEEEec----ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhCCCCEEEeC
Confidence 4445556678775 35555432 234455666667789999988864221 22 223456889998876
No 117
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=80.89 E-value=15 Score=27.38 Aligned_cols=69 Identities=19% Similarity=0.138 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.+.+.+.+.++++|+ ++.+.+. ..+++-.++++++..++++.||...-........+. .....|||.+=
T Consensus 19 ~~~~gi~~~a~~~g~--~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 19 TEWKFADKAGKDLGF--EVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHHHTE--EEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeC
Confidence 455667777888885 5566666 488888888888888889988887765555555442 34578998764
No 118
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=80.54 E-value=5.4 Score=27.11 Aligned_cols=65 Identities=3% Similarity=0.057 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEecCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVPLL 81 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP~~ 81 (138)
=.+++..+.+++.|+++++..+|.+...+. . .++++||...-..-.+.-+-. .....||+-+++.
T Consensus 19 ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~----~-----~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~~~ 85 (109)
T 2l2q_A 19 MLVQRIEKYAKSKNINATIEAIAETRLSEV----V-----DRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINTI 85 (109)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECSTTHHHH----T-----TTCSEEEECSCCSSHHHHHHHHHHHHTCCEEECCHH
T ss_pred HHHHHHHHHHHHCCCCeEEEEecHHHHHhh----c-----CCCCEEEECCccHHHHHHHHHHhcccCCCEEEEChH
Confidence 456799999999999999988888654432 2 358999886655544444332 2246788877764
No 119
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=80.20 E-value=16 Score=27.11 Aligned_cols=70 Identities=9% Similarity=0.032 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP 79 (138)
...+.+.+.++++|+ ++.+...+..+++..++++.+.+++++.||........+...+.- ....|||.+=
T Consensus 25 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~ 96 (293)
T 3l6u_A 25 RLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAID 96 (293)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEec
Confidence 456677778888886 666777888888888888888888899888876665555444432 3578998874
No 120
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=79.63 E-value=3.9 Score=25.88 Aligned_cols=54 Identities=19% Similarity=0.197 Sum_probs=42.3
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCC---------eEEEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 1 MESDLDLPVMNDAARTLSDFGVP---------YEIKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~---------~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
+|+.+|.+-+++...-|...|.+ |.|+|- ...+.++..++.+..+..|++.+|+
T Consensus 14 vGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vG-pf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 14 IGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIG-AFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEE-EESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred EEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEEC-CcCCHHHHHHHHHHHHHcCCceEEE
Confidence 37789999999999999988987 445553 5677788888888887777777764
No 121
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=79.38 E-value=2.5 Score=29.86 Aligned_cols=68 Identities=13% Similarity=0.085 Sum_probs=46.2
Q ss_pred cCCHHHHHHHHHHHHH---hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 4 DLDLPVMNDAARTLSD---FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~---~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
++-=|+|+++++.|++ +|++|+..=..-+..++++.++++.. .+..+.|+|-+
T Consensus 21 k~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~----------------------~G~~tVP~IfI-- 76 (127)
T 3l4n_A 21 KSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLV----------------------TGRGTVPNLLV-- 76 (127)
T ss_dssp CTTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHH----------------------HSCCSSCEEEE--
T ss_pred cCCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHH----------------------cCCCCcceEEE--
Confidence 4455899999999997 48888877666776667777766432 14577888753
Q ss_pred CCCCCCchh-hhhhhc
Q 032570 81 LSEDWSEDD-VINSIR 95 (138)
Q Consensus 81 ~~~~~~G~d-LlS~lq 95 (138)
.+.-++|.| |..+.+
T Consensus 77 ~G~~IGG~ddl~~l~~ 92 (127)
T 3l4n_A 77 NGVSRGGNEEIKKLHT 92 (127)
T ss_dssp TTEECCCHHHHHHHHH
T ss_pred CCEEEcCHHHHHHHHH
Confidence 444466766 655443
No 122
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=79.34 E-value=10 Score=30.01 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=54.9
Q ss_pred HHHhCCCeEEEEEcc--C--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe-cCCCCCCCchhhh
Q 032570 17 LSDFGVPYEIKILPP--H--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV-PLLSEDWSEDDVI 91 (138)
Q Consensus 17 L~~~gi~~~~~V~Sa--H--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv-P~~~~~~~G~dLl 91 (138)
+++||+.. +.+.+. . -+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||+.+ |+.+..-.|-|.+
T Consensus 193 ~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~pl~~~~~~~~~Y~ 271 (286)
T 3gi1_A 193 AKRFGLKQ-LGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKTYL 271 (286)
T ss_dssp HHHTTCEE-EEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCCSCSCCSSSCCHH
T ss_pred HHHCCCeE-eeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEecccccCCCCcCCHH
Confidence 45677763 334332 2 4678999999999999999999999999999999999999999876 4444222333344
Q ss_pred hhh
Q 032570 92 NSI 94 (138)
Q Consensus 92 S~l 94 (138)
+++
T Consensus 272 ~~m 274 (286)
T 3gi1_A 272 ENL 274 (286)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 123
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=79.11 E-value=2.4 Score=28.34 Aligned_cols=38 Identities=11% Similarity=-0.136 Sum_probs=28.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
++.=|+|+++++.|++.||+|+..= .-..|+...++.+
T Consensus 11 ~~~Cp~C~~aK~~L~~~gi~y~~id--i~~d~~~~~~~~~ 48 (92)
T 2lqo_A 11 TSWCGYCLRLKTALTANRIAYDEVD--IEHNRAAAEFVGS 48 (92)
T ss_dssp CTTCSSHHHHHHHHHHTTCCCEEEE--TTTCHHHHHHHHH
T ss_pred CCCCHhHHHHHHHHHhcCCceEEEE--cCCCHHHHHHHHH
Confidence 4555789999999999999987543 3456776665543
No 124
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=79.08 E-value=16 Score=26.59 Aligned_cols=67 Identities=9% Similarity=-0.013 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|. ++.+...+..+++..++++....++++-+|.......... .+. ....||+.+
T Consensus 19 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~-~l~-~~~~pvV~~ 85 (255)
T 1byk_A 19 LAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEE-MLA-HWQSSLVLL 85 (255)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTTCCTT-TSG-GGSSSEEEE
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEecCccccHH-HHH-hcCCCEEEE
Confidence 456677778888885 5666677778888888888887788897776654322222 222 234688765
No 125
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=78.67 E-value=5.1 Score=25.22 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=21.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEc
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILP 30 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~S 30 (138)
+.=+.|+++...|+++|++|+..-..
T Consensus 20 ~~Cp~C~~~~~~L~~~gi~~~~~~v~ 45 (92)
T 3ic4_A 20 STCPHCKRTLEFLKREGVDFEVIWID 45 (92)
T ss_dssp TTCHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCChHHHHHHHHHHHcCCCcEEEEee
Confidence 34489999999999999999875443
No 126
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=78.31 E-value=12 Score=28.76 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
...+.+.+.+++.|. ++.+...+..+++..++++....++++-+|........ ..+. .....||+.+-
T Consensus 77 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~l~~~~iPvV~~~ 146 (332)
T 2hsg_A 77 ELARGIEDIATMYKY--NIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTE--EHVEELKKSPVPVVLAA 146 (332)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSCCH--HHHHHHTTSSSCEEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCH--HHHHHHHhCCCCEEEEc
Confidence 456677778888886 55566666667777778888877788877766543222 2222 23568988763
No 127
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=78.04 E-value=13 Score=28.55 Aligned_cols=73 Identities=11% Similarity=0.176 Sum_probs=42.9
Q ss_pred CeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCCchh-h--hhhhcCCCCCeeeEEecCCchh--HHHHHHHHHccC
Q 032570 50 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-V--INSIRMPSHVQVASVPRNNAKN--AALYAVKVLGIA 124 (138)
Q Consensus 50 ~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~G~d-L--lS~lqmP~GvpvatV~I~~~~n--AA~~AaqIl~~~ 124 (138)
++++|.-+| .+.-.=|...-+|||..|..+. .+.. . --.++ .|.+. +. ...+ ..-+|..|..+
T Consensus 255 ad~~v~~sg---~~~~~EAma~G~Pvi~~~~~g~--~~~q~~~~~~~~~--~g~g~--~~--~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 255 ADVVVCRSG---ALTVSEIAAAGLPALFVPFQHK--DRQQYWNALPLEK--AGAAK--II--EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp CSEEEECCC---HHHHHHHHHHTCCEEECCCCCT--TCHHHHHHHHHHH--TTSEE--EC--CGGGCCHHHHHHHHHTC-
T ss_pred CCEEEECCc---hHHHHHHHHhCCCEEEeeCCCC--chhHHHHHHHHHh--CCcEE--Ee--ccccCCHHHHHHHHHhc-
Confidence 678888765 2322335567899999877542 1211 0 11222 24322 22 3444 77788888888
Q ss_pred CHHHHHHHHH
Q 032570 125 DEDLLERIRK 134 (138)
Q Consensus 125 ~~~l~~kl~~ 134 (138)
|++.++++.+
T Consensus 323 ~~~~~~~~~~ 332 (364)
T 1f0k_A 323 SRETLLTMAE 332 (364)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9998887754
No 128
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=77.46 E-value=8.7 Score=23.23 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 44 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~ 44 (138)
+.=+.|+++...|++.|++|+..-.. ..++...++.+.
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~ 46 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIKR 46 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHH
Confidence 34488999999999999998765443 345555555543
No 129
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=77.23 E-value=5.1 Score=29.76 Aligned_cols=66 Identities=11% Similarity=-0.005 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
..+.+.+.+.++++|+ ++.+...+ .++...++++.+.+++++-|| +..... ...+.. ...|||.+=
T Consensus 21 ~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI-~~~~~~--~~~~~~-~~iPvV~~~ 86 (280)
T 3gyb_A 21 IDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII-IAQDIP--DFTVPD-SLPPFVIAG 86 (280)
T ss_dssp HHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE-EESCC-----------CCCEEEES
T ss_pred HHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE-ecCCCC--hhhHhh-cCCCEEEEC
Confidence 4566777888888885 67777777 777777777877778899888 443322 223333 677887653
No 130
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=76.98 E-value=4 Score=33.21 Aligned_cols=63 Identities=8% Similarity=-0.040 Sum_probs=45.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHhhhcCCeEEEEecCcCCch-hHHh
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHL-SGVA 67 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p-~~~~~~~~~~~~~~~~viIa~AG~~a~L-~gvv 67 (138)
.||.+.+++..+.+++.|+.++..+..++|++ +++.++++...+-|+++ |.+.+..+.+ |.-+
T Consensus 116 ~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT~G~~~P~~v 180 (345)
T 1nvm_A 116 CTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADSGGAMSMNDI 180 (345)
T ss_dssp TTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECTTCCCCHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCCcCccCHHHH
Confidence 46667788888888999998888888888875 67888888887767774 4444444333 4433
No 131
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=76.79 E-value=21 Score=26.58 Aligned_cols=69 Identities=13% Similarity=0.227 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgv 78 (138)
...+.+.+.+++.|. ++-+......+++-.+++++..+++++-||........+...+.. ....|||-+
T Consensus 18 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 18 TLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEe
Confidence 456667778888886 566666777777777778877778899887765444443333322 356899876
No 132
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=76.72 E-value=5.2 Score=25.61 Aligned_cols=51 Identities=18% Similarity=-0.017 Sum_probs=38.9
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCe---------EEEEEccCCCchHHHHHHHHhhhcCCeE
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPY---------EIKILPPHQNCKEALSYALSAKERGIKI 52 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~---------~~~V~SaHR~p~~~~~~~~~~~~~~~~v 52 (138)
.|+.+|.+-+++...-|...|++. .|+| +...+-++..+..+..+..|++-
T Consensus 14 vGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~v-Gpf~s~~~A~~~~~~L~~~g~~~ 73 (81)
T 1uta_A 14 CGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVI-GPVKGKENADSTLNRLKMAGHTN 73 (81)
T ss_dssp CCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEE-SSCBTTTHHHHHHHHHHHHCCSC
T ss_pred EEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEE-CCcCCHHHHHHHHHHHHHcCCCc
Confidence 488999999999999999999873 3333 36667778888877776666553
No 133
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=75.81 E-value=10 Score=30.20 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=28.6
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 21 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 21 gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
++|.-+++. ..-+.+++.++++.+++.|++.|++..+
T Consensus 211 ~~Pv~vKi~-~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKIA-PDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEECC-SCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEec-CCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 789888864 5556678888888888889998887543
No 134
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=75.71 E-value=2.7 Score=31.44 Aligned_cols=69 Identities=9% Similarity=-0.014 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh-ccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~-~t~~PVIgvP 79 (138)
.+.+.+.+.+++.|....+. ..+..+++..++++...+++++-+|...-.... .-.... ....|||.+=
T Consensus 29 ~~~~gi~~~a~~~g~~~~~~--~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~~~iPvV~~~ 98 (289)
T 3g85_A 29 RFLRGLQSKLAKQNYNYNVV--ICPYKTDCLHLEKGISKENSFDAAIIANISNYD-LEYLNKASLTLPIILFN 98 (289)
T ss_dssp HHHHHHHHHHHHTTTCSEEE--EEEECTTCGGGCGGGSTTTCCSEEEESSCCHHH-HHHHHHCCCSSCEEEES
T ss_pred HHHHHHHHHHHHcCCeEEEE--ecCCCchhHHHHHHHHhccCCCEEEEecCCccc-HHHHHhccCCCCEEEEC
Confidence 45677778888898866554 344445555566666777789988876543222 223322 3568988763
No 135
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=75.66 E-value=12 Score=27.76 Aligned_cols=66 Identities=18% Similarity=0.136 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch-hHH---hhhccCCcEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-SGV---AAANSQILVIRVP 79 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L-~gv---va~~t~~PVIgvP 79 (138)
...+++.+.|++.|++++..+.. .. -...+.+.+++. +.++.++|....+ +++ +.-+++.||+-+|
T Consensus 199 ~~l~~~~~~l~~~~~~~~~~~~~--g~--~~~~i~~~a~~~--dliV~G~~~~~~~~Gs~~~~vl~~~~~pvlvv~ 268 (268)
T 3ab8_A 199 AWALEAEAYLRDHGVEASALVLG--GD--AADHLLRLQGPG--DLLALGAPVRRLVFGSTAERVIRNAQGPVLTAR 268 (268)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEC--SC--HHHHHHHHCCTT--EEEEEECCCSCCSSCCHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHHHcCCceEEEEeC--CC--hHHHHHHHHHhC--CEEEECCcccccEeccHHHHHHhcCCCCEEEeC
Confidence 45667777777888887776653 22 233444444443 7777766544433 222 3346777877665
No 136
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=75.57 E-value=11 Score=28.55 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=41.4
Q ss_pred HHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--------hhhccCCcEEEecCC
Q 032570 13 AARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLL 81 (138)
Q Consensus 13 ~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--------va~~t~~PVIgvP~~ 81 (138)
..+.++++|++ ++..+..- . -...+.+.+++.+++.+|.++-.-+.+... +.-+++.||+-||+.
T Consensus 204 l~~~~~~~g~~~~~~~v~~g--~--~~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~ 277 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIEEG--P--ADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPD 277 (290)
T ss_dssp HHHHHHHHTCCTTTEEEEES--C--HHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHTTCSSEEEEECCH
T ss_pred HHHHHHHcCCCcceEEEecc--C--HHHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHHHHhcCCCCEEEECCC
Confidence 33456678985 55555543 2 234455556667899888887655555432 335789999999875
No 137
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=75.32 E-value=20 Score=27.85 Aligned_cols=68 Identities=6% Similarity=0.141 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCC-chHHHHHHHHhhhcCCeEEEEecCcCCchhHH--hhhccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~-p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--va~~t~~PVIgv 78 (138)
.+.+.+.+.+++.|+ ++.+...+.. ++...++++....++++-||........ .-. .......||+-+
T Consensus 78 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~~vdGiIi~~~~~~~-~~~~~~~~~~~iPvV~i 148 (349)
T 1jye_A 78 QIVAAILSRADQLGA--SVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQ-DAIAVEAACTNVPALFL 148 (349)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHH-HHHHHHHHTTTSCEEES
T ss_pred HHHHHHHHHHHHcCC--EEEEEeCCCCcHHHHHHHHHHHHHCCCCEEEEecCCCCh-hHHHHHHhhCCCCEEEE
Confidence 356677778888886 5555655544 5666677777777788877765433221 111 122356898865
No 138
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=75.03 E-value=12 Score=25.40 Aligned_cols=55 Identities=13% Similarity=0.266 Sum_probs=39.7
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 68 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva 68 (138)
|+| -.+++..+.+++.|+++++.-++.....+.. + ++++|+...-..-.+.-+-.
T Consensus 15 sTS--~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~----~-----~~Dvil~~pqv~~~~~~~~~ 69 (106)
T 1e2b_A 15 STS--LLVSKMRAQAEKYEVPVIIEAFPETLAGEKG----Q-----NADVVLLGPQIAYMLPEIQR 69 (106)
T ss_dssp TTH--HHHHHHHHHHHHSCCSEEEEEECSSSTTHHH----H-----HCSEEEECTTSGGGHHHHHH
T ss_pred hHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhhc----c-----CCCEEEEccchhhhHHHHHH
Confidence 445 5888999999999999999888876655543 2 26888886665555554443
No 139
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=74.96 E-value=3.1 Score=33.01 Aligned_cols=76 Identities=8% Similarity=0.075 Sum_probs=47.6
Q ss_pred CCCcCCHHHHHHHHHHHH----HhCCCeEEEEEccCCCchHH--------------HHHHHHhhhcCCeEEEEecC-cCC
Q 032570 1 MESDLDLPVMNDAARTLS----DFGVPYEIKILPPHQNCKEA--------------LSYALSAKERGIKIIIVGDG-VEA 61 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~----~~gi~~~~~V~SaHR~p~~~--------------~~~~~~~~~~~~~viIa~AG-~~a 61 (138)
||.-|=..+.+++.+... ...+|| .+.|--..|++. .+.++..++.|++.|+.... .+.
T Consensus 35 mg~~aT~~~~~~i~~~~~~~~D~~h~p~--~~~s~~~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~Gad~IVIaCNTah~ 112 (268)
T 3s81_A 35 MGPAATADMLEKFVELRHASCDQQHIPL--IVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAHY 112 (268)
T ss_dssp SSHHHHHHHHHHHHHHSCCSSGGGSCCE--EEEECTTSCCHHHHHHHCCCCSHHHHHHHHHHHHHTTCSEEECSCSGGGG
T ss_pred CCHHHHHHHHHHHHHhhHhhcCCCCCCE--EEeccCCHHHHHHHHHhCCchHHHHHHHHHHHHHHcCCCEEEEeCCCHHH
Confidence 444444556677666543 344554 666666667666 67777778889996554444 344
Q ss_pred chhHHhhhccCCcEEEec
Q 032570 62 HLSGVAAANSQILVIRVP 79 (138)
Q Consensus 62 ~L~gvva~~t~~PVIgvP 79 (138)
.+.- +...+..|||++.
T Consensus 113 ~l~~-lr~~~~iPvigii 129 (268)
T 3s81_A 113 WFDD-LQNVAKARMISIL 129 (268)
T ss_dssp GHHH-HHHHCSSEEECHH
T ss_pred HHHH-HHHHCCCCEEccc
Confidence 4444 4456789999963
No 140
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=74.86 E-value=22 Score=26.06 Aligned_cols=67 Identities=7% Similarity=-0.007 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
...+.+.+.+++.|. ++.+......+++..++++....++++.+|........ ..+. -....||+.+
T Consensus 16 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~~~~~~iPvV~~ 84 (276)
T 2h0a_A 16 RLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTE--RFEEGRLPTERPVVLV 84 (276)
T ss_dssp HHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESCCCC--------CCSCSSCEEEE
T ss_pred HHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCCCH--HHHHHHhhcCCCEEEE
Confidence 455667777888885 56666666666666666777767788987776544321 2222 1245788875
No 141
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=74.45 E-value=8.5 Score=26.07 Aligned_cols=64 Identities=6% Similarity=-0.091 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSED 84 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~ 84 (138)
+.=|+|+++++.|++.|++|+..=... .++...++.+ .++..+.|+|-+ .+..
T Consensus 29 ~~Cp~C~~ak~~L~~~gi~y~~~di~~--d~~~~~~l~~-----------------------~~g~~tvP~ifi--~g~~ 81 (111)
T 3zyw_A 29 PRCGFSKQMVEILHKHNIQFSSFDIFS--DEEVRQGLKA-----------------------YSSWPTYPQLYV--SGEL 81 (111)
T ss_dssp BSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHH-----------------------HHTCCSSCEEEE--TTEE
T ss_pred CcchhHHHHHHHHHHcCCCeEEEECcC--CHHHHHHHHH-----------------------HHCCCCCCEEEE--CCEE
Confidence 566899999999999999997654333 3433333322 124567888753 4445
Q ss_pred CCchh-hhhhhc
Q 032570 85 WSEDD-VINSIR 95 (138)
Q Consensus 85 ~~G~d-LlS~lq 95 (138)
++|.| +..+.+
T Consensus 82 iGG~d~l~~l~~ 93 (111)
T 3zyw_A 82 IGGLDIIKELEA 93 (111)
T ss_dssp EECHHHHHHHHH
T ss_pred EecHHHHHHHHH
Confidence 67877 776655
No 142
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=74.35 E-value=20 Score=27.30 Aligned_cols=66 Identities=11% Similarity=0.045 Sum_probs=42.5
Q ss_pred HHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh--------hhccCCcEEEecCCC
Q 032570 13 AARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIRVPLLS 82 (138)
Q Consensus 13 ~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv--------a~~t~~PVIgvP~~~ 82 (138)
..+.++++|++ .+..+..- .| ...+.+.+++.+++.+|.++-.-..+...+ .-+++.||+-||+.+
T Consensus 233 l~~~~~~~~~~~~~~~v~~g--~~--~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~~ 307 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVKEG--LP--EQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPDG 307 (319)
T ss_dssp HHHHHHHTTCCGGGEEEEES--CH--HHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHHHHHHTTCCSEEEEECCTT
T ss_pred HHHHHHHhCCCcccEEEecC--Cc--HHHHHHHHHHhCCCEEEEeccCccCCccccccHHHHHHHhhCCCCEEEECCCC
Confidence 34455788885 34555432 33 445566666778999999885445554332 246899999999865
No 143
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=74.31 E-value=16 Score=27.93 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--------HhhhccCCcE
Q 032570 9 VMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILV 75 (138)
Q Consensus 9 ~~~~~~~~L~~~-----gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--------vva~~t~~PV 75 (138)
..+++.+.+++. |++++..+..- . -...+++.++ +++.||..+-..+.+.. -+.-++..||
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g--~--~~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PV 156 (309)
T 3cis_A 83 LIDDALKVVEQASLRAGPPTVHSEIVPA--A--AVPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPV 156 (309)
T ss_dssp HHHHHHHHHHHHCSSSCCSCEEEEEESS--C--HHHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHhcccCCCceEEEEEecC--C--HHHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCCCCE
Confidence 345556666665 89988877632 2 2344444443 68988887655444322 2345789999
Q ss_pred EEecCCC
Q 032570 76 IRVPLLS 82 (138)
Q Consensus 76 IgvP~~~ 82 (138)
+-||...
T Consensus 157 lvv~~~~ 163 (309)
T 3cis_A 157 VIIHDED 163 (309)
T ss_dssp EEECTTC
T ss_pred EEEcCCc
Confidence 9999764
No 144
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=74.07 E-value=6.4 Score=29.95 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--------hhhccCCcEEEec
Q 032570 9 VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--------va~~t~~PVIgvP 79 (138)
..+++.+.++..|++++. .+.. +-.|.+.. ..++++++.||.+.-..+.+... +.-++..||+-||
T Consensus 87 ~l~~~~~~~~~~g~~~~~~~v~~-~g~~~~~I----~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~ 161 (294)
T 3loq_A 87 VLPEVAQKIEAAGIKAEVIKPFP-AGDPVVEI----IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFK 161 (294)
T ss_dssp HHHHHHHHHHHTTCEEEECSSCC-EECHHHHH----HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHHcCCCcceeEeec-cCChhHhe----eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCCCCEEEec
Confidence 345566666778888776 4441 22333332 44567899888887665555443 3456789999999
Q ss_pred CCC
Q 032570 80 LLS 82 (138)
Q Consensus 80 ~~~ 82 (138)
...
T Consensus 162 ~~~ 164 (294)
T 3loq_A 162 HDM 164 (294)
T ss_dssp CCT
T ss_pred Ccc
Confidence 865
No 145
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=73.87 E-value=2.5 Score=34.79 Aligned_cols=49 Identities=16% Similarity=0.143 Sum_probs=33.0
Q ss_pred CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCC
Q 032570 34 NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 34 ~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
+++...+.++++++.+++.+|++-|-...-..-.=+.-.+||||||-.-
T Consensus 79 ~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTI 127 (320)
T 1pfk_A 79 DENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTI 127 (320)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCchHHHHHHHHhhCCCEEEEeccc
Confidence 4456677888888888998888866533222222234589999999863
No 146
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=73.83 E-value=10 Score=25.06 Aligned_cols=65 Identities=14% Similarity=0.057 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSED 84 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~ 84 (138)
+.=+.|++++..|+++|++|+..=... .++...++.+.. .+..+.|+|- ..+..
T Consensus 24 ~~Cp~C~~ak~~L~~~~i~y~~idI~~--~~~~~~~l~~~~----------------------~g~~~vP~if--i~g~~ 77 (99)
T 3qmx_A 24 STCPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARA----------------------NGKRSLPQIF--IDDQH 77 (99)
T ss_dssp TTCHHHHHHHHHHHHHTCCCEEEECTT--CHHHHHHHHHHT----------------------TTCCCSCEEE--ETTEE
T ss_pred CCChhHHHHHHHHHHCCCCCEEEEcCC--CHHHHHHHHHHh----------------------CCCCCCCEEE--ECCEE
Confidence 445899999999999999998654443 344333333211 1456777773 34445
Q ss_pred CCchh-hhhhhc
Q 032570 85 WSEDD-VINSIR 95 (138)
Q Consensus 85 ~~G~d-LlS~lq 95 (138)
++|.| +....+
T Consensus 78 igG~d~l~~~~~ 89 (99)
T 3qmx_A 78 IGGCDDIYALDG 89 (99)
T ss_dssp EESHHHHHHHHH
T ss_pred EeChHHHHHHHH
Confidence 67777 665543
No 147
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=73.69 E-value=9.1 Score=25.60 Aligned_cols=63 Identities=13% Similarity=0.089 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDW 85 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~ 85 (138)
.=|+|+++++.|+++|++|+..=.. ..++...++.+ ..+..+.|+|-+ .+..+
T Consensus 32 ~Cp~C~~ak~~L~~~gi~~~~~dI~--~~~~~~~~l~~-----------------------~~g~~tvP~ifi--~g~~i 84 (109)
T 3ipz_A 32 MCGFSNTVVQILKNLNVPFEDVNIL--ENEMLRQGLKE-----------------------YSNWPTFPQLYI--GGEFF 84 (109)
T ss_dssp SSHHHHHHHHHHHHTTCCCEEEEGG--GCHHHHHHHHH-----------------------HHTCSSSCEEEE--TTEEE
T ss_pred CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHH-----------------------HHCCCCCCeEEE--CCEEE
Confidence 5689999999999999998765433 23333333322 124567787743 44456
Q ss_pred Cchh-hhhhhc
Q 032570 86 SEDD-VINSIR 95 (138)
Q Consensus 86 ~G~d-LlS~lq 95 (138)
+|.| +..+.+
T Consensus 85 GG~d~l~~l~~ 95 (109)
T 3ipz_A 85 GGCDITLEAFK 95 (109)
T ss_dssp ECHHHHHHHHH
T ss_pred eCHHHHHHHHH
Confidence 7777 766544
No 148
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=73.59 E-value=2.7 Score=34.50 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=31.0
Q ss_pred chHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCC
Q 032570 35 CKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 35 p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
++..++.+++.++.+++.+|++-|-...=....-+.-.+||||||-.-
T Consensus 79 ~e~~~~~~~~l~~~~Id~L~~IGGdgS~~~a~~l~~~~i~vigiPkTI 126 (319)
T 4a3s_A 79 VEGREKGIANLKKLGIEGLVVIGGDGSYMGAKKLTEHGFPCVGVPGTI 126 (319)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHhccCCcEEEeeccc
Confidence 345566677777778888877766543322222245679999999753
No 149
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=73.52 E-value=2.8 Score=34.51 Aligned_cols=48 Identities=17% Similarity=0.139 Sum_probs=32.3
Q ss_pred CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 34 NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 34 ~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
+++...+.++++++.+++.+|++-|-...-..-.=+.-.+||||||-.
T Consensus 78 ~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkT 125 (319)
T 1zxx_A 78 EEEGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGLPGT 125 (319)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHhCCCEEEEeec
Confidence 445677788888888888888876653322222223447999999975
No 150
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=72.76 E-value=27 Score=25.96 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEE-EccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRV 78 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V-~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgv 78 (138)
...+.+.+.++++|+ ++.+ ...+..+++..++++.+..++++.||........+...+. .....|||.+
T Consensus 21 ~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~ 92 (303)
T 3d02_A 21 RMGEGVVQAGKEFNL--NASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTN 92 (303)
T ss_dssp HHHHHHHHHHHHTTE--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEE
Confidence 345666777888884 5654 3467788888888888877889988876654333322332 2356899876
No 151
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=71.99 E-value=29 Score=26.14 Aligned_cols=71 Identities=18% Similarity=0.217 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
...+.+.+.++++|+ ++.+...+..+++-.++++++..++++.||...-........+.- ....|||.+=.
T Consensus 20 ~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 20 DDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECC
Confidence 345667778888886 566777888898888888888778899888766554444444432 35689987643
No 152
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=71.76 E-value=12 Score=23.32 Aligned_cols=36 Identities=11% Similarity=-0.009 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
.=+.|+++...|++.|++|+..=.. +.++...++.+
T Consensus 15 ~C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~ 50 (92)
T 2khp_A 15 GCPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQE 50 (92)
T ss_dssp TCHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHH
T ss_pred CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHH
Confidence 3478999999999999998754433 34554455544
No 153
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=71.07 E-value=9.2 Score=29.49 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
.+.+.+.+.++++|+ ++.++..+..+++..++++.+.+++++.||...
T Consensus 24 ~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~ 71 (296)
T 2hqb_A 24 KAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHG 71 (296)
T ss_dssp HHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 456677778889985 566665555656666788888888899888764
No 154
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=70.24 E-value=19 Score=28.20 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=48.6
Q ss_pred HHHHHHHHHhCCCeEEEEE-c----cCCCchHHHHHHHHh-hhcCCeEEEEecCc----CCchhHHhhhccCCcEEEe
Q 032570 11 NDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~-S----aHR~p~~~~~~~~~~-~~~~~~viIa~AG~----~a~L~gvva~~t~~PVIgv 78 (138)
+++.+.+-.+|..--+.+. . .|-.|..+-+.+..+ ++.++++|++.+.. .+.+++.+|++...|.+.-
T Consensus 69 ~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~ 146 (252)
T 1efp_B 69 AETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATF 146 (252)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccc
Confidence 4444444557998666665 3 366777777766555 44578999988765 4889999999999998843
No 155
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=69.27 E-value=20 Score=24.65 Aligned_cols=50 Identities=16% Similarity=0.269 Sum_probs=40.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh--hcCCeEEEEecC
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK--ERGIKIIIVGDG 58 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~--~~~~~viIa~AG 58 (138)
+.|....+++++..++-+. ++|- -++-+++.+|+++++ ++.++|+|-+..
T Consensus 9 sndkklieearkmaekanl--elrt---vktedelkkyleefrkesqnikvlilvsn 60 (110)
T 2kpo_A 9 SNDKKLIEEARKMAEKANL--ELRT---VKTEDELKKYLEEFRKESQNIKVLILVSN 60 (110)
T ss_dssp CSCHHHHHHHHHHHHHHTC--EEEE---CCSHHHHHHHHHHHTSSTTSEEEEEEESS
T ss_pred cCcHHHHHHHHHHHHhcCc--eeee---eccHHHHHHHHHHHHhhccCeEEEEEEcC
Confidence 4688899999999998877 5553 478899999998884 568899998764
No 156
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=68.92 E-value=23 Score=27.81 Aligned_cols=69 Identities=10% Similarity=0.106 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhCCCeEEEEE-c----cCCCchHHHHHHHHh-hhcCCeEEEEecCc----CCchhHHhhhccCCcEEEe
Q 032570 10 MNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~-S----aHR~p~~~~~~~~~~-~~~~~~viIa~AG~----~a~L~gvva~~t~~PVIgv 78 (138)
++++.+.+-.+|..--+.+. . .|-.|..+-+.+... ++.++++|++.+.. .+.+++.+|++...|.+.-
T Consensus 71 a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~ 149 (255)
T 1efv_B 71 CQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTF 149 (255)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccc
Confidence 34444444567998666665 3 477787777766554 44578999988755 4889999999999998843
No 157
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=68.36 E-value=15 Score=25.33 Aligned_cols=63 Identities=14% Similarity=0.005 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCC
Q 032570 6 DLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSED 84 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~ 84 (138)
.=|+|+++++.|+++|++ |+..=..- .++...++.+ . .+..+.|+|- +.+..
T Consensus 34 ~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~~~~~~l~~-~----------------------tg~~tvP~vf--I~g~~ 86 (118)
T 2wem_A 34 QCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKD-Y----------------------SNWPTIPQVY--LNGEF 86 (118)
T ss_dssp SSHHHHHHHHHHHHTTCCCCEEEESSS--CHHHHHHHHH-H----------------------HTCCSSCEEE--ETTEE
T ss_pred ccHHHHHHHHHHHHcCCCCCEEEEcCC--CHHHHHHHHH-H----------------------hCCCCcCeEE--ECCEE
Confidence 568999999999999996 87654442 3333333221 1 2456788874 34445
Q ss_pred CCchh-hhhhhc
Q 032570 85 WSEDD-VINSIR 95 (138)
Q Consensus 85 ~~G~d-LlS~lq 95 (138)
++|.| |..+.+
T Consensus 87 IGG~d~l~~l~~ 98 (118)
T 2wem_A 87 VGGCDILLQMHQ 98 (118)
T ss_dssp EESHHHHHHHHH
T ss_pred EeChHHHHHHHH
Confidence 67777 665543
No 158
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=67.10 E-value=13 Score=26.40 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDW 85 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~ 85 (138)
.=++|+++++.|+++|++|+..=..- .|+...++.+. .+..+.|+|-+ .+..+
T Consensus 49 ~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~~-----------------------~G~~tvP~VfI--~G~~i 101 (135)
T 2wci_A 49 SCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPKY-----------------------ANWPTFPQLWV--DGELV 101 (135)
T ss_dssp SSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHHH-----------------------HTCCSSCEEEE--TTEEE
T ss_pred CCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHHH-----------------------HCCCCcCEEEE--CCEEE
Confidence 45799999999999999987654433 34433333221 23456777743 34446
Q ss_pred Cchh-hhhhhc
Q 032570 86 SEDD-VINSIR 95 (138)
Q Consensus 86 ~G~d-LlS~lq 95 (138)
+|.| +..+.+
T Consensus 102 GG~d~l~~l~~ 112 (135)
T 2wci_A 102 GGCDIVIEMYQ 112 (135)
T ss_dssp ESHHHHHHHHH
T ss_pred EChHHHHHHHH
Confidence 7777 665543
No 159
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=66.54 E-value=2.7 Score=34.11 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHhCCCe--------------------------EEEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 8 PVMNDAARTLSDFGVPY--------------------------EIKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~--------------------------~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
.+++|+.+.|.++|+.. +.+|.|-.=++++++++++.+.++|++||+=
T Consensus 23 ~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD 96 (496)
T 4gqr_A 23 DIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVD 96 (496)
T ss_dssp HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 46788888899999841 1234444447889999999999999999873
No 160
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=65.84 E-value=11 Score=24.84 Aligned_cols=28 Identities=11% Similarity=-0.005 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.=|+|++++..|+++|++|+..-..-+
T Consensus 27 ~~Cp~C~~~~~~L~~~~i~~~~~di~~~ 54 (113)
T 3rhb_A 27 TWCSYCTEVKTLFKRLGVQPLVVELDQL 54 (113)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEEGGGS
T ss_pred CCChhHHHHHHHHHHcCCCCeEEEeecC
Confidence 4448899999999999999976655443
No 161
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=65.76 E-value=26 Score=27.60 Aligned_cols=68 Identities=10% Similarity=0.027 Sum_probs=46.8
Q ss_pred HHHHHHHHHhCCCeEEEEEcc---CCCchHHHHHHHHh-hhcCCeEEEEecCc----CCchhHHhhhccCCcEEEe
Q 032570 11 NDAARTLSDFGVPYEIKILPP---HQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~Sa---HR~p~~~~~~~~~~-~~~~~~viIa~AG~----~a~L~gvva~~t~~PVIgv 78 (138)
+++.+.+-.+|..--+.+... |..+..+-+.+..+ ++.++++|++.+.. .+.+++.+|.+...|.+.-
T Consensus 70 ~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~ 145 (264)
T 1o97_C 70 DESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAV 145 (264)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccc
Confidence 444444445788855666532 35677766666554 34579999998765 4789999999999998743
No 162
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=65.59 E-value=44 Score=25.66 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh--cCCeEEEEecCcCCchhHHhhh--ccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLSGVAAA--NSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~--~~~~viIa~AG~~a~L~gvva~--~t~~PVIgvP~ 80 (138)
.+.+.+.+.++++|+ ++.+......+++..+.++++.. ++++.||... ........+.- ....|||.+=.
T Consensus 21 ~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 21 SYSQFMQAAARDLGL--DLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQYVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CSSHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHHHHHHHHcCC--eEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-chhhHHHHHHHHHhCCCcEEEEcC
Confidence 456667778888987 55566778888888888887766 5899888864 44455555543 45789997644
No 163
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=64.69 E-value=26 Score=27.07 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=39.9
Q ss_pred HHHHHHHHHhCC-CeEEEEEccCCCchHH-------------HHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEE
Q 032570 11 NDAARTLSDFGV-PYEIKILPPHQNCKEA-------------LSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVI 76 (138)
Q Consensus 11 ~~~~~~L~~~gi-~~~~~V~SaHR~p~~~-------------~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVI 76 (138)
+.+.+.++.+-- ..++...++...|..+ .+.++..+..|++.|+.....+.+| -.+-...+.|||
T Consensus 17 ~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~~~~d~~~a~~~l~~~~~~l~~~g~d~iviaCnt~~~l-~~lr~~~~iPvi 95 (245)
T 3qvl_A 17 ETIGAAARAVAAPGTEILAVCPRAGVPSIEGHFDEAIAAVGVLEQIRAGREQGVDGHVIASFGDPGL-LAARELAQGPVI 95 (245)
T ss_dssp HHHHHHHHHHCCTTEEEEEECCSSSCSSCCSHHHHHHHHHHHHHHHHHHHHHTCSEEEEC-CCCTTH-HHHHHHCSSCEE
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCchhhcChhHHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHH-HHHHHHcCCCEE
Confidence 444455554432 3567777776666432 2333444566889666555555566 556677899999
Q ss_pred Ee
Q 032570 77 RV 78 (138)
Q Consensus 77 gv 78 (138)
|+
T Consensus 96 gi 97 (245)
T 3qvl_A 96 GI 97 (245)
T ss_dssp EH
T ss_pred Cc
Confidence 97
No 164
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=64.09 E-value=10 Score=27.28 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEAL 39 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~ 39 (138)
|.++++.-.|++.|++||..-......++...
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~~ 44 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLA 44 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHHH
Confidence 78999999999999999988777665565443
No 165
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=63.70 E-value=21 Score=26.22 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh---hccCCcEEEecC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA---ANSQILVIRVPL 80 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva---~~t~~PVIgvP~ 80 (138)
...+.+.+.+++.|.. +.+...+..++...++++...+++++-||.... . +..+. .....|||.+=.
T Consensus 25 ~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~~-~---~~~~~~~l~~~~iPvV~~~~ 94 (277)
T 3e61_A 25 LIARGVEDVALAHGYQ--VLIGNSDNDIKKAQGYLATFVSHNCTGMISTAF-N---ENIIENTLTDHHIPFVFIDR 94 (277)
T ss_dssp HHHHHHHHHHHHTTCC--EEEEECTTCHHHHHHHHHHHHHTTCSEEEECGG-G---HHHHHHHHHHC-CCEEEGGG
T ss_pred HHHHHHHHHHHHCCCE--EEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC-C---hHHHHHHHHcCCCCEEEEec
Confidence 4566677788888864 556778888888888888888888998887662 2 22222 235788887543
No 166
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=63.16 E-value=12 Score=24.69 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 41 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~ 41 (138)
+.=++|++++..|+++|++|+..=..- .++...++
T Consensus 28 ~~Cp~C~~ak~~L~~~~i~~~~vdi~~--~~~~~~~l 62 (109)
T 1wik_A 28 AKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGL 62 (109)
T ss_dssp CCSSTHHHHHHHHHHTCSCEEEEESSS--CHHHHHHH
T ss_pred CCCchHHHHHHHHHHcCCCeEEEECCC--CHHHHHHH
Confidence 344689999999999999987654443 34433333
No 167
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=62.37 E-value=22 Score=24.88 Aligned_cols=33 Identities=18% Similarity=0.061 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHH
Q 032570 8 PVMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi-~~~~~V~SaHR~p~~~~~~~~ 43 (138)
+++.++.++|+.+|+ +|+..-.. ..+ ++.+.++
T Consensus 36 ~fc~~ak~lL~~~gv~~~~~~~v~--~~~-~~r~~l~ 69 (118)
T 2wul_A 36 GFSNAVVQILRLHGVRDYAAYNVL--DDP-ELRQGIK 69 (118)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEETT--SCH-HHHHHHH
T ss_pred HHHHHHHHHHHHhCCcCeEeeccc--CCH-HHHHHHH
Confidence 689999999999999 67654333 333 3444443
No 168
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=62.24 E-value=34 Score=27.60 Aligned_cols=50 Identities=14% Similarity=0.009 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
.+-+..+.+++|++.-.+++.-.|+.+++.+++..+...|++=|.++.|=
T Consensus 71 ~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 71 HSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 34455566789999999999999999999999999988899988888875
No 169
>1g2h_A Transcriptional regulatory protein TYRR homolog; protein structure, , DNA-binding domain, helix- turn-helix motif; NMR {Haemophilus influenzae} SCOP: a.4.1.12
Probab=62.24 E-value=3.6 Score=25.28 Aligned_cols=21 Identities=14% Similarity=0.442 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 032570 116 YAVKVLGIADEDLLERIRKYV 136 (138)
Q Consensus 116 ~AaqIl~~~~~~l~~kl~~~~ 136 (138)
-||+.|+++...|+.|++.|.
T Consensus 38 ~aA~~LGIsr~tL~rklkk~g 58 (61)
T 1g2h_A 38 KLAQRLGVSHTAIANKLKQYG 58 (61)
T ss_dssp HHHHHTTSCTHHHHHHHHTTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478899999999999999874
No 170
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=62.07 E-value=8.8 Score=24.02 Aligned_cols=21 Identities=29% Similarity=0.282 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIK 27 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~ 27 (138)
=+.|+++...|++.|++|+..
T Consensus 16 C~~C~~~~~~L~~~~i~~~~v 36 (89)
T 2klx_A 16 CPYCKRARDLLDKKGVKYTDI 36 (89)
T ss_dssp CTTTHHHHHHHHHHTCCEEEE
T ss_pred ChhHHHHHHHHHHcCCCcEEE
Confidence 368899999999999998754
No 171
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=61.74 E-value=43 Score=26.12 Aligned_cols=64 Identities=11% Similarity=0.125 Sum_probs=51.3
Q ss_pred HHHhCCCeEEEEEc----cCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 17 LSDFGVPYEIKILP----PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 17 L~~~gi~~~~~V~S----aHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
+++||+.. +.+.+ .=-+|.++.++++..+++++++|+.=...+.-+.-.+|..+..||+.+.+.
T Consensus 191 ~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~l 258 (284)
T 3cx3_A 191 AKRFGLNQ-LGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPL 258 (284)
T ss_dssp HHHTTCCE-EEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECCCS
T ss_pred HHHcCCEE-eeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecCc
Confidence 46788873 34442 235789999999999999999999999999999999999999999876443
No 172
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=61.68 E-value=16 Score=25.07 Aligned_cols=63 Identities=11% Similarity=-0.017 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCC
Q 032570 6 DLPVMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~---~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
.=|+|+++++.|+++|++ |+..=.. ..++. .+.++. ..+..+.|+|- +.+
T Consensus 30 ~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~-~~~l~~----------------------~sg~~tvP~vf--I~g 82 (121)
T 3gx8_A 30 KCGFSRATIGLLGNQGVDPAKFAAYNVL--EDPEL-REGIKE----------------------FSEWPTIPQLY--VNK 82 (121)
T ss_dssp CTTHHHHHHHHHHHHTBCGGGEEEEECT--TCHHH-HHHHHH----------------------HHTCCSSCEEE--ETT
T ss_pred CCccHHHHHHHHHHcCCCcceEEEEEec--CCHHH-HHHHHH----------------------HhCCCCCCeEE--ECC
Confidence 468999999999999999 6533222 33333 332221 12456788875 344
Q ss_pred CCCCchh-hhhhhc
Q 032570 83 EDWSEDD-VINSIR 95 (138)
Q Consensus 83 ~~~~G~d-LlS~lq 95 (138)
..++|.| |..+.+
T Consensus 83 ~~iGG~d~l~~l~~ 96 (121)
T 3gx8_A 83 EFIGGCDVITSMAR 96 (121)
T ss_dssp EEEESHHHHHHHHH
T ss_pred EEEecHHHHHHHHH
Confidence 4567877 666544
No 173
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=61.38 E-value=15 Score=26.64 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
+.++++.-.|++.|++||...........+..+|.+
T Consensus 13 p~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 13 PPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 788999999999999999988776555555556654
No 174
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=61.30 E-value=7.3 Score=30.50 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc----cCCcEEEecCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN----SQILVIRVPLL 81 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~----t~~PVIgvP~~ 81 (138)
.+..+++.+.|++.|++++ .++++++|++-| .+.+-.++-.. ...|++|+|+-
T Consensus 14 ~~~~~~l~~~l~~~g~~v~---------------------~~~~D~vv~lGG-DGT~l~aa~~~~~~~~~~PilGIn~G 70 (272)
T 2i2c_A 14 DLLRLNMIAGFGEYDMEYD---------------------DVEPEIVISIGG-DGTFLSAFHQYEERLDEIAFIGIHTG 70 (272)
T ss_dssp HHHHHHHHHHHTTSSCEEC---------------------SSSCSEEEEEES-HHHHHHHHHHTGGGTTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHCCCEeC---------------------CCCCCEEEEEcC-cHHHHHHHHHHhhcCCCCCEEEEeCC
Confidence 3456677777888887652 246787777654 44444444332 37899999864
No 175
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=60.78 E-value=20 Score=23.36 Aligned_cols=26 Identities=19% Similarity=0.147 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEc
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILP 30 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~S 30 (138)
+.=+.|+++...|+++|++|+..=..
T Consensus 30 ~~C~~C~~~~~~L~~~~i~~~~vdi~ 55 (105)
T 2yan_A 30 AKCGFSKQILEILNSTGVEYETFDIL 55 (105)
T ss_dssp BCTTHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCCccHHHHHHHHHHCCCCeEEEECC
Confidence 44578999999999999998755443
No 176
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=60.62 E-value=7 Score=29.35 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=36.4
Q ss_pred HHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhHHh
Q 032570 12 DAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 12 ~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~gvv 67 (138)
+..+.+++-|+ ++.|.|.+|+.++-.++.++... .+..+.-+-.|.|.|-.|..
T Consensus 43 ~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~A 97 (179)
T 2vo9_A 43 NVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVA 97 (179)
T ss_dssp HHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTCE
T ss_pred HHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCccc
Confidence 33444445566 68999999999999998765543 34444445567777776654
No 177
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=60.42 E-value=15 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEc
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILP 30 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~S 30 (138)
+.=|.|++++..|+++|++|+..-..
T Consensus 30 ~~Cp~C~~ak~~L~~~~i~y~~vdI~ 55 (103)
T 3nzn_A 30 STCVWCKKTKKLLTDLGVDFDYVYVD 55 (103)
T ss_dssp SSCHHHHHHHHHHHHHTBCEEEEEGG
T ss_pred CCCchHHHHHHHHHHcCCCcEEEEee
Confidence 33489999999999999999865443
No 178
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=60.32 E-value=38 Score=23.22 Aligned_cols=119 Identities=12% Similarity=0.069 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCC----chHH--HHHH---HHhhhcCCeEEEEecCcCCchhHHhhhccCCcEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQN----CKEA--LSYA---LSAKERGIKIIIVGDGVEAHLSGVAAANSQILVI 76 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~----p~~~--~~~~---~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVI 76 (138)
+....+++.+.|++++. .+-+..-... ++.+ ..|+ +-+....+++||.=+|. ..-.=+-..-+|+|
T Consensus 36 ~~~~~~~~~~al~~~~~--~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~---~t~~Ea~~~G~P~i 110 (170)
T 2o6l_A 36 TEERANVIASALAQIPQ--KVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGA---NGIYEAIYHGIPMV 110 (170)
T ss_dssp CHHHHHHHHHHHTTSSS--EEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEEECCCH---HHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHhCCC--eEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEEEcCCc---cHHHHHHHcCCCEE
Confidence 56677777777776653 4433322211 1110 0111 11111458899986553 22222234679999
Q ss_pred EecCCCCCCCchh-hhhhhcCCCCCeeeEEecC-CchhHHHHHHHHHcc-CCHHHHHHHHHHHh
Q 032570 77 RVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLERIRKYVE 137 (138)
Q Consensus 77 gvP~~~~~~~G~d-LlS~lqmP~GvpvatV~I~-~~~nAA~~AaqIl~~-~~~~l~~kl~~~~~ 137 (138)
.+|.... ..+.. .+. -.|.++ + ++ +..+..-++..|..+ .|++++++.+.+++
T Consensus 111 ~~p~~~~-Q~~na~~l~----~~g~g~--~-~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~~ 166 (170)
T 2o6l_A 111 GIPLFAD-QPDNIAHMK----ARGAAV--R-VDFNTMSSTDLLNALKRVINDPSYKENVMKLSR 166 (170)
T ss_dssp ECCCSTT-HHHHHHHHH----TTTSEE--E-CCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC-
T ss_pred eccchhh-HHHHHHHHH----HcCCeE--E-eccccCCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 9998632 21212 222 135333 2 23 222455555555544 68889988887764
No 179
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=60.20 E-value=15 Score=27.28 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=22.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.=+.|++++..|++.|++|+..-..-+
T Consensus 178 ~~Cp~C~~a~~~L~~~~i~~~~~~i~~~ 205 (241)
T 1nm3_A 178 PGCPFCAKAKQLLHDKGLSFEEIILGHD 205 (241)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEETTTT
T ss_pred CCChHHHHHHHHHHHcCCceEEEECCCc
Confidence 3448899999999999999987655543
No 180
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=59.91 E-value=37 Score=25.19 Aligned_cols=44 Identities=18% Similarity=0.198 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHH-HHHHHhhhcCCeEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEAL-SYALSAKERGIKII 53 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~-~~~~~~~~~~~~vi 53 (138)
+.| .+.+...++.+|.. .+.|.+ ..+..+. .|.+..+..|++|+
T Consensus 93 ~iP-~~a~~~a~~~~g~~-rvgvlt--~~~~~~~~~~~~~l~~~G~~v~ 137 (223)
T 2dgd_A 93 VIP-EESVYELLKKLNVR-KLWIGT--PYIKERTLEEVEWWRNKGFEIV 137 (223)
T ss_dssp BCH-HHHHHHHHHHTTCC-EEEEEE--SSCHHHHHHHHHHHHTTTCEEE
T ss_pred CCC-HHHHHHHHHHcCCC-eEEEEe--CCchHHHHHHHHHHHhCCcEEe
Confidence 444 44555555556653 566664 2233333 33344444566643
No 181
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=59.83 E-value=36 Score=25.13 Aligned_cols=54 Identities=9% Similarity=-0.001 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
|....++.++.|++.|+.+...-....+..+.+.+.++.++.-|++.++...|.
T Consensus 61 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~ 114 (262)
T 3p6l_A 61 DAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPAL 114 (262)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCG
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCH
Confidence 456688999999999997654444455677888888888888899988887764
No 182
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=58.57 E-value=24 Score=27.61 Aligned_cols=61 Identities=8% Similarity=0.082 Sum_probs=48.6
Q ss_pred HHHhCCCeEEEEE--ccC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 17 LSDFGVPYEIKIL--PPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 17 L~~~gi~~~~~V~--SaH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
+++||+... .+. |.. -+|+++.++++..+++++++|+.=...+.-+.-.+|-.+..||+.+
T Consensus 188 ~~~yGl~~~-~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 188 EKQFGLTPL-GHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp HHHHTCCCC-EEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HHHCCCeEe-EeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 457888742 222 333 4668999999999999999999999999999999999999998765
No 183
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=58.15 E-value=10 Score=25.91 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC-CCchHHHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALS 44 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH-R~p~~~~~~~~~ 44 (138)
+.|+++...|++.|++|+.+=..-+ -+.+++.++++.
T Consensus 16 ~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~ 53 (120)
T 2kok_A 16 DTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKT 53 (120)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHH
Confidence 7899999999999999987644332 233777777653
No 184
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=57.90 E-value=13 Score=23.75 Aligned_cols=60 Identities=10% Similarity=0.098 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCCchh-
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD- 89 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~G~d- 89 (138)
+++.+.|++.|++|+..=... .++...++.+.. |. ...+.|+|-+ .+..++|.|
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~--~~~~~~~l~~~~------------g~---------~~~~vP~ifi--~g~~igG~d~ 76 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQ--DNALRDEMRTLA------------GN---------PKATPPQIVN--GNHYCGDYEL 76 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTS--CHHHHHHHHHHT------------TC---------TTCCSCEEEE--TTEEEEEHHH
T ss_pred HHHHHHHHHCCCceEEEECCC--CHHHHHHHHHHh------------CC---------CCCCCCEEEE--CCEEEeCHHH
Confidence 899999999999998765543 344433333211 10 1457788753 344567777
Q ss_pred hhhhhc
Q 032570 90 VINSIR 95 (138)
Q Consensus 90 LlS~lq 95 (138)
|....+
T Consensus 77 l~~l~~ 82 (93)
T 1t1v_A 77 FVEAVE 82 (93)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 776655
No 185
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=56.94 E-value=6.7 Score=31.86 Aligned_cols=66 Identities=20% Similarity=0.278 Sum_probs=41.3
Q ss_pred HHHHHHHhCCC--eEEEEEcc-----CCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh-ccCCcEEEe
Q 032570 13 AARTLSDFGVP--YEIKILPP-----HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRV 78 (138)
Q Consensus 13 ~~~~L~~~gi~--~~~~V~Sa-----HR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~-~t~~PVIgv 78 (138)
..+.++.||+. |++.|.+. ..+...+.++.+..++..++++++..+....+++.+++ ....||+.+
T Consensus 68 ~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 68 LDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 34456788884 55554211 11222333344444556799999998887778866554 678999876
No 186
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=55.94 E-value=64 Score=24.44 Aligned_cols=68 Identities=15% Similarity=0.143 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCCeEEEEE--ccC----CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--hhhccCCcEEEe
Q 032570 9 VMNDAARTLSDFGVPYEIKIL--PPH----QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~--SaH----R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--va~~t~~PVIgv 78 (138)
..+++.+.++++|+++.+.+. +.| .+++...+..+.+.+.|++.+.+.- ...+..+ +...+..||++.
T Consensus 133 ~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~--~~~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 133 DLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY--TGDIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC--CSSHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC--CCCHHHHHHHHHhCCCCEEEE
Confidence 456666777789999876542 223 4556666655667777888554432 1222221 223456788763
No 187
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=55.83 E-value=12 Score=31.95 Aligned_cols=49 Identities=20% Similarity=0.127 Sum_probs=34.4
Q ss_pred CCchHHHHHHHHhhhcCCeEEEEecCcCCchhH--Hhhh-----ccCCcEEEecCCC
Q 032570 33 QNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--VAAA-----NSQILVIRVPLLS 82 (138)
Q Consensus 33 R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g--vva~-----~t~~PVIgvP~~~ 82 (138)
++++...+.++++++.+++.+|++-|- +.+-+ .++- ...+||||||-.-
T Consensus 88 ~~~~~~~~~~~~l~~~~Id~Lv~IGGd-gS~~~A~~L~~~~~~~g~~i~vIGiPkTI 143 (419)
T 3hno_A 88 QNRREYERLIEVFKAHDIGYFFYNGGG-DSADTCLKVSQLSGTLGYPIQAIHVPKTV 143 (419)
T ss_dssp -CHHHHHHHHHHHHHTTEEEEEEEESH-HHHHHHHHHHHHHHHTTCCCEEEEEECCT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHHHhCCCccEEEecccc
Confidence 466788888899999999998888774 22222 2322 2469999999863
No 188
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=55.80 E-value=8.1 Score=34.16 Aligned_cols=48 Identities=25% Similarity=0.281 Sum_probs=29.8
Q ss_pred CchHHHHHHHHhhhcCCeEEEEecCcCCch-hHHhhhc-----cCCcEEEecCC
Q 032570 34 NCKEALSYALSAKERGIKIIIVGDGVEAHL-SGVAAAN-----SQILVIRVPLL 81 (138)
Q Consensus 34 ~p~~~~~~~~~~~~~~~~viIa~AG~~a~L-~gvva~~-----t~~PVIgvP~~ 81 (138)
+++...+.+++.++.+++.+|++-|-...- +-.++-. ..+||||||-.
T Consensus 151 ~~e~~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkT 204 (555)
T 2f48_A 151 TEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKT 204 (555)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccc
Confidence 455666777777777888777776543221 1122221 27999999975
No 189
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=55.37 E-value=61 Score=26.18 Aligned_cols=53 Identities=17% Similarity=0.325 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHH-hCCCeEEEEE-ccC--CCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 6 DLPVMNDAARTLSD-FGVPYEIKIL-PPH--QNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 6 D~~~~~~~~~~L~~-~gi~~~~~V~-SaH--R~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
|...+.++.+.+.+ .++|..+++- +.- .+.+.+.++++.+++.|++.|++-.+
T Consensus 110 ~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 110 DLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 56666666666654 6888877653 221 12246778888888889998887654
No 190
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=55.23 E-value=20 Score=25.94 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
+.++++.-+|++.|++||+......+..++..+|.+
T Consensus 12 ~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~ 47 (216)
T 3vk9_A 12 APCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLK 47 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHH
T ss_pred hhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHH
Confidence 678899999999999999988876555555555553
No 191
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=54.67 E-value=6.4 Score=28.39 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=30.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEE--cc--CCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKIL--PP--HQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~--Sa--HR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
+||+.....+.+.|++.||+|++.-. +. .++.+++.+++.--..+-+|-++.-
T Consensus 2 ~~~~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~~~~~~~~Ktlv~~ 58 (166)
T 2dxa_A 2 SSGSSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVA 58 (166)
T ss_dssp ------CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHTCCTTTEEEEEEEE
T ss_pred CCCCCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcCCCHHHeeEEEEEE
Confidence 57788889999999999999998642 22 1566666665532233335544443
No 192
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=54.50 E-value=6 Score=24.26 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=18.8
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 032570 116 YAVKVLGIADEDLLERIRKYV 136 (138)
Q Consensus 116 ~AaqIl~~~~~~l~~kl~~~~ 136 (138)
-||+.|+++...|+.|+++|.
T Consensus 37 ~aA~~LGisr~tL~rklkk~g 57 (63)
T 3e7l_A 37 RTAEEIGIDLSNLYRKIKSLN 57 (63)
T ss_dssp HHHHHHTCCHHHHHHHHHHTT
T ss_pred HHHHHHCcCHHHHHHHHHHhC
Confidence 578999999999999999884
No 193
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=54.25 E-value=13 Score=25.79 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHHh
Q 032570 7 LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 45 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~-V~SaHR~p~~~~~~~~~~ 45 (138)
=+.|+++.+.|++-|++|+.+ |..-.-+.+++.++++..
T Consensus 15 C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 15 CSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp CHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 468999999999999999854 433444566777776544
No 194
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=54.13 E-value=36 Score=29.16 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=47.4
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEE--ccCC-CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQ-NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~~~V~--SaHR-~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv 67 (138)
.+.||..-++++.+.+++.|...+..++ ...| +|+.+.++++.+.+-|++.|-.+.=.-...|.-+
T Consensus 121 ~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v 189 (464)
T 2nx9_A 121 DAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAA 189 (464)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHH
T ss_pred EecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHH
Confidence 5789999999999999999998776662 2333 7788899998888888886655432222344443
No 195
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=54.00 E-value=12 Score=25.94 Aligned_cols=39 Identities=10% Similarity=0.084 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHHh
Q 032570 7 LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 45 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~-V~SaHR~p~~~~~~~~~~ 45 (138)
=+.|+++.+.|++-|++|+.+ +..-.-+.+++.++++..
T Consensus 14 C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 14 CSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp CHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 368999999999999999865 544455667788877654
No 196
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=53.77 E-value=15 Score=25.33 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHHh
Q 032570 7 LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 45 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~-V~SaHR~p~~~~~~~~~~ 45 (138)
=+.|+++.+.|++-|++|+.+ |..-.-+.+++.++++..
T Consensus 14 C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 14 CSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 368999999999999999854 444445667777777644
No 197
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=53.44 E-value=60 Score=26.21 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=31.1
Q ss_pred hCCCeEEEEEccC-----CCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 20 FGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 20 ~gi~~~~~V~SaH-----R~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
.+.+.-+|+..-. -+.++..++++..++.|++.|-+..|+
T Consensus 208 v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 208 WDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp CCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCC
T ss_pred cCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4778888888643 246788889999988899988887765
No 198
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=53.34 E-value=26 Score=25.00 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
-+.++++.-.|++.|++|+...........+-.+|.
T Consensus 9 s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~ 44 (219)
T 3f6d_A 9 SAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFL 44 (219)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHH
T ss_pred CCchHHHHHHHHHcCCCceEEEccCcccccCCHHHH
Confidence 367899999999999999988876654333333444
No 199
>1ntc_A Protein (nitrogen regulation protein (NTRC)); helix-turn-helix, FIS, four-helix bundle, transcription regulation; NMR {Salmonella typhimurium} SCOP: a.4.1.12
Probab=53.06 E-value=8.5 Score=25.29 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=19.3
Q ss_pred HHHHHHccCCHHHHHHHHHHHh
Q 032570 116 YAVKVLGIADEDLLERIRKYVE 137 (138)
Q Consensus 116 ~AaqIl~~~~~~l~~kl~~~~~ 137 (138)
-||+.|+++...|+.||++|.-
T Consensus 69 ~aA~~LGIsr~tL~rklkk~~i 90 (91)
T 1ntc_A 69 EAARLLGWGAATLTAKLKELGM 90 (91)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHhCc
Confidence 4688999999999999999863
No 200
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=52.75 E-value=54 Score=25.53 Aligned_cols=42 Identities=17% Similarity=0.153 Sum_probs=19.0
Q ss_pred chHHHHHHHHhhhcCCe-EEEE-ecCcCCc-hhHHhhhccCCcEE
Q 032570 35 CKEALSYALSAKERGIK-IIIV-GDGVEAH-LSGVAAANSQILVI 76 (138)
Q Consensus 35 p~~~~~~~~~~~~~~~~-viIa-~AG~~a~-L~gvva~~t~~PVI 76 (138)
++.+.+.++++..++++ ||+. |.++... +-.-+...+.+|||
T Consensus 193 ~~~l~~~~~~l~~~gadaIvLg~CT~l~~~~~~~~le~~lg~PVi 237 (273)
T 2xed_A 193 GEQVMAAARSLDLSEVDALVISCAVQMPSLPLVETAEREFGIPVL 237 (273)
T ss_dssp HHHHHHHHHHSCCTTCSEEEEESSSSSCCTTHHHHHHHHHSSCEE
T ss_pred HHHHHHHHHHHhhCCCCEEEEcCCCCcchHHhHHHHHHHhCCCEE
Confidence 44455555555444555 3334 4455432 23333333445555
No 201
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=52.72 E-value=13 Score=28.38 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcCCchhHH
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGV 66 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~a~L~gv 66 (138)
+++..+.+++-|++ +.|.|.+|++++-.++..+...+ |..|.-+-.|.|.|.-|.
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~ 96 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCcccee
Confidence 34444455567775 89999999999999987655432 333333344777776654
No 202
>1umq_A Photosynthetic apparatus regulatory protein; DNA-binding protein, response regulator, DNA binding domain, helix-turn-helix; NMR {Rhodobacter sphaeroides} SCOP: a.4.1.12
Probab=52.71 E-value=4.6 Score=26.79 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 032570 116 YAVKVLGIADEDLLERIRKYV 136 (138)
Q Consensus 116 ~AaqIl~~~~~~l~~kl~~~~ 136 (138)
-||++|+++...|+.|+++|.
T Consensus 59 ~AA~~LGISR~TLyrKLkk~g 79 (81)
T 1umq_A 59 ETARRLNMHRRTLQRILAKRS 79 (81)
T ss_dssp HHHHHHTSCHHHHHHHHHTSS
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478999999999999999874
No 203
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=52.54 E-value=24 Score=24.45 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC-CCchHHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYAL 43 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaH-R~p~~~~~~~~ 43 (138)
.=+.|+++...|++.|++|+.+=..-+ -+.+++.++++
T Consensus 10 ~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 10 SCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp TCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence 347899999999999999986544322 23356666553
No 204
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=52.50 E-value=17 Score=25.14 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALS 44 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~-V~SaHR~p~~~~~~~~~ 44 (138)
=+.|+++.+.|++-|++|+.+ +..-.-+.+++.++++.
T Consensus 13 C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 13 CSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence 368999999999999999765 43334455667777654
No 205
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=51.97 E-value=35 Score=23.19 Aligned_cols=43 Identities=12% Similarity=0.168 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 60 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~ 60 (138)
.+++..+.+++.|+++++..++....++.. .++|+||...-..
T Consensus 38 l~~kl~~~~~~~gi~~~V~~~~~~~~~~~~---------~~~DlIist~~l~ 80 (113)
T 1tvm_A 38 AAEEIKELCQSHNIPVELIQCRVNEIETYM---------DGVHLICTTARVD 80 (113)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTTTTTST---------TSCSEEEESSCCC
T ss_pred HHHHHHHHHHHcCCeEEEEEecHHHHhhcc---------CCCCEEEECCccc
Confidence 467888899999999888888876655421 3578888865444
No 206
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.71 E-value=31 Score=22.99 Aligned_cols=67 Identities=12% Similarity=-0.024 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCCchh
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD 89 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~G~d 89 (138)
++++.+.|++.|++|+..=... .++...++.+..... ..-..+..+.|+|-+ ....++|.|
T Consensus 27 ~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~~~~~---------------~~~~~g~~tvP~vfi--~g~~iGG~d 87 (111)
T 2ct6_A 27 QQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKNVPPE---------------KKPTQGNPLPPQIFN--GDRYCGDYD 87 (111)
T ss_dssp HHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHSCCTT---------------TCCSSSSCCSCEEEE--TTEEEEEHH
T ss_pred HHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHHhccc---------------ccccCCCCCCCEEEE--CCEEEeCHH
Confidence 3399999999999988655543 454444443321100 000124567888853 344567777
Q ss_pred -hhhhhc
Q 032570 90 -VINSIR 95 (138)
Q Consensus 90 -LlS~lq 95 (138)
|..+.+
T Consensus 88 ~l~~l~~ 94 (111)
T 2ct6_A 88 SFFESKE 94 (111)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 666554
No 207
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=51.69 E-value=52 Score=22.09 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 10 MNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 10 ~~~~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
..+..+.+++.|++ +++..++.+ ++.++. .++++||...-....+. .....||+++-
T Consensus 36 ~~kl~~~~~~~gi~~~~i~~~~~~----~~~~~~-----~~~DlIi~t~~l~~~~~----~~~~~~vi~i~ 93 (110)
T 3czc_A 36 KMKVENALRQLGVSDIESASCSVG----EAKGLA-----SNYDIVVASNHLIHELD----GRTNGKLIGLD 93 (110)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECHH----HHHHHG-----GGCSEEEEETTTGGGTT----TSCSSEEEEES
T ss_pred HHHHHHHHHHcCCCeEEEEEeeHH----HHhhcc-----CCCcEEEECCchHHHhC----cCCCceEEEee
Confidence 34888899999998 888888773 333321 34788888654443222 12334566543
No 208
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=51.55 E-value=7.1 Score=29.38 Aligned_cols=75 Identities=15% Similarity=0.048 Sum_probs=41.0
Q ss_pred CCCcCCHHHHHHHHHHH----HHhCCCeEEEEEccCCCchHHH--------------HHHHHhhhcCCeEEEEecC-cCC
Q 032570 1 MESDLDLPVMNDAARTL----SDFGVPYEIKILPPHQNCKEAL--------------SYALSAKERGIKIIIVGDG-VEA 61 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L----~~~gi~~~~~V~SaHR~p~~~~--------------~~~~~~~~~~~~viIa~AG-~~a 61 (138)
||..|=..+.+++.+.. +.... .+.+.|-=..|++.. +.++..++.|++.|+..-. .+.
T Consensus 10 mg~~at~~~~~~i~~~~~~~~d~~~~--~~~~~~~~~i~~r~~~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnTa~~ 87 (228)
T 1jfl_A 10 MGPLATAELFRRIVIKTPAKRDQEHP--KVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIMPCNTAHA 87 (228)
T ss_dssp SSHHHHHHHHHHHHHTCCCSSGGGSC--CEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEECSCTGGGG
T ss_pred cCHHHHHHHHHHHHHHHHhhcCCccC--cEeEEeCCCHHHHHHHHHcCCchHHHHHHHHHHHHHHcCCCEEEEcCccHHH
Confidence 34444445666665542 22223 344454434555544 6777777778885544333 333
Q ss_pred chhHHhhhccCCcEEEe
Q 032570 62 HLSGVAAANSQILVIRV 78 (138)
Q Consensus 62 ~L~gvva~~t~~PVIgv 78 (138)
.+ --+...+..|||++
T Consensus 88 ~~-~~l~~~~~iPvi~i 103 (228)
T 1jfl_A 88 FV-EDIRKAIKIPIISM 103 (228)
T ss_dssp GH-HHHHHHCSSCBCCH
T ss_pred HH-HHHHHhCCCCEech
Confidence 33 34445678999986
No 209
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=51.28 E-value=34 Score=25.48 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=36.5
Q ss_pred HHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEE
Q 032570 13 AARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVI 76 (138)
Q Consensus 13 ~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVI 76 (138)
+....+-||++.+ +... .+++++++.+++++++|+++||+ +.+.-=+|-.--+|.+
T Consensus 109 ~~~~~~ll~~~i~--~~~~-~~~~e~~~~i~~l~~~G~~vvVG-----~~~~~~~A~~~Gl~~v 164 (196)
T 2q5c_A 109 KHEIEAMLGVKIK--EFLF-SSEDEITTLISKVKTENIKIVVS-----GKTVTDEAIKQGLYGE 164 (196)
T ss_dssp HHHHHHHHTCEEE--EEEE-CSGGGHHHHHHHHHHTTCCEEEE-----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhCCceE--EEEe-CCHHHHHHHHHHHHHCCCeEEEC-----CHHHHHHHHHcCCcEE
Confidence 3444456777544 4322 67889999999999999999887 2333444555555533
No 210
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=50.66 E-value=14 Score=24.93 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc-CCCchHHHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP-HQNCKEALSYALS 44 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p~~~~~~~~~ 44 (138)
.=+.|+++.+.|++.|++|+.+=..- .-+.+++.++++.
T Consensus 9 ~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~ 48 (114)
T 1rw1_A 9 ACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp SCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHh
Confidence 34789999999999999987654432 2334777777753
No 211
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=50.57 E-value=23 Score=25.30 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++|+.......
T Consensus 17 s~~~~~v~~~l~~~gi~~e~~~v~~~ 42 (215)
T 3bby_A 17 SPYVLSAWVALQEKGLSFHIKTIDLD 42 (215)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEEEC--
T ss_pred CcHHHHHHHHHHHcCCCCEEEEecCc
Confidence 47899999999999999998877653
No 212
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=50.40 E-value=37 Score=28.82 Aligned_cols=24 Identities=8% Similarity=0.041 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEE
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKI 28 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V 28 (138)
+.=|+|.++++.|++.|++|+..=
T Consensus 26 ~~Cp~C~~~k~~L~~~~i~~~~~d 49 (598)
T 2x8g_A 26 TTCPYCKKVKDVLAEAKIKHATIE 49 (598)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCChhHHHHHHHHHHCCCCcEEEE
Confidence 344899999999999999987543
No 213
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=50.18 E-value=7.2 Score=26.53 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=18.9
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 032570 116 YAVKVLGIADEDLLERIRKYV 136 (138)
Q Consensus 116 ~AaqIl~~~~~~l~~kl~~~~ 136 (138)
-||++|+++...|+.||++|.
T Consensus 76 ~AA~~LGIsR~TL~rkLkk~g 96 (98)
T 1eto_A 76 RAALMMGINRGTLRKKLKKYG 96 (98)
T ss_dssp HHHHHHTSCHHHHHHHHHHTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478899999999999999985
No 214
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=50.00 E-value=92 Score=24.50 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=49.4
Q ss_pred HHHhCCCeEEEEEc--cC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 17 LSDFGVPYEIKILP--PH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 17 L~~~gi~~~~~V~S--aH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
+++||+.. +.+.+ .. =+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||++.
T Consensus 197 ~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~~ 261 (294)
T 3hh8_A 197 SKAYGVPS-AYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIYSE 261 (294)
T ss_dssp HHHHTCCE-EEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEEEE
T ss_pred HHHcCCce-eeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHhCCcEEee
Confidence 46788874 34433 33 3678999999999999999999999999999999999999999864
No 215
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=49.70 E-value=67 Score=24.32 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=42.1
Q ss_pred hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH-hhhccCCcEEE
Q 032570 20 FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV-AAANSQILVIR 77 (138)
Q Consensus 20 ~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv-va~~t~~PVIg 77 (138)
.|.++++.+..-...|++..+.++++.+++++.||.........+-. ++.....|+|.
T Consensus 40 ~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~ 98 (356)
T 3ipc_A 40 NGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHANSGVSIPASEVYAENGILEIT 98 (356)
T ss_dssp TTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCCcHHHHHHHHHHHhCCCeEEe
Confidence 36779999999999999998888888778888888765443333221 33456789986
No 216
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=49.62 E-value=48 Score=29.55 Aligned_cols=52 Identities=8% Similarity=0.096 Sum_probs=41.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------CCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~Sa-------------HR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
..|.+.+++..+.+++.|||+|+-+... .|-|+ ..+++++.+++|.++++-+
T Consensus 174 Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPd-p~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 174 YTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPD-FPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTT-HHHHHHHHHTTTCEEEEEE
T ss_pred cCCHHHHHHHHHHHHhcCCCcceEEEecHHHHhhcccccChhhCCC-HHHHHHHHHHcCceEEeee
Confidence 4567778888888999999999988773 46664 7889999988999976544
No 217
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=49.37 E-value=15 Score=25.64 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEccC-CCchHHHHHHHHhhhcCCeEEEEe
Q 032570 10 MNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaH-R~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
.+++.+.|++.||+|+..-...- ++-+++.+++.-...+-+|-++.-
T Consensus 2 ~~~~~~~L~~~~i~~~~~~~p~~~~t~~~~a~~lg~~~~~~~Ktlv~~ 49 (152)
T 1wdv_A 2 LEKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVL 49 (152)
T ss_dssp -CHHHHHHHHHTCCCEEEECSSCCSSHHHHHHHHTSCGGGBEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEcCCCCCCHHHHHHHcCCCHHHeEEEEEEE
Confidence 46788999999999998766555 666777666643334445655543
No 218
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=49.06 E-value=29 Score=25.02 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=37.9
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
++...++++++...|+..|+..|+-.. |+-+++-.-+.++..+++..+|++.-.
T Consensus 17 s~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVVG~k 70 (130)
T 1v95_A 17 NKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVITQQ 70 (130)
T ss_dssp SSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEECHH
T ss_pred CcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEEech
Confidence 355779999999999999998887321 223666666677767777766665433
No 219
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=48.92 E-value=72 Score=24.15 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=34.1
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchh-----HH---hhhccCCcEEEecCC
Q 032570 21 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIRVPLL 81 (138)
Q Consensus 21 gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~-----gv---va~~t~~PVIgvP~~ 81 (138)
|++++..+..- .| ...+++.++ +++.+|.++-.-+.+. ++ +.-+++.||+-||..
T Consensus 245 ~~~~~~~~~~g--~~--~~~I~~~a~--~adliV~G~~~~~~~~~~l~Gsv~~~vl~~~~~pVlvv~~~ 307 (309)
T 3cis_A 245 NVAITRVVVRD--QP--ARQLVQRSE--EAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 307 (309)
T ss_dssp TSCEEEEEESS--CH--HHHHHHHHT--TCSEEEEESSCSSCCTTCSSCHHHHHHHHHCSSCEEEECC-
T ss_pred CCcEEEEEEcC--CH--HHHHHHhhC--CCCEEEECCCCCCCccccccCcHHHHHHhcCCCCEEEeCCC
Confidence 78888777642 23 334445444 6898888775444332 22 345688999999864
No 220
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.28 E-value=38 Score=23.01 Aligned_cols=25 Identities=20% Similarity=0.230 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
++|+++...|++++++|+..=+.-+
T Consensus 38 p~C~~~~~~L~~~~i~~~~vdid~~ 62 (130)
T 2cq9_A 38 SYCTMAKKLFHDMNVNYKVVELDLL 62 (130)
T ss_dssp SHHHHHHHHHHHHTCCCEEEETTTS
T ss_pred hHHHHHHHHHHHcCCCcEEEECcCC
Confidence 6899999999999999876444333
No 221
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=47.92 E-value=57 Score=24.46 Aligned_cols=70 Identities=20% Similarity=0.103 Sum_probs=44.0
Q ss_pred HHHHHHHHHHH-------hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH-HhhhccCCcEEEe
Q 032570 9 VMNDAARTLSD-------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG-VAAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~-------~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g-vva~~t~~PVIgv 78 (138)
..+-+...+++ .|.+.++.+..-.-.|++..+.+++..+++++.||...+.+..++- -++.....|+|..
T Consensus 22 ~~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~ 99 (346)
T 1usg_A 22 EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISP 99 (346)
T ss_dssp HHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECCSSHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcCCCcHHHHHHHHHHHHCCCeEEee
Confidence 33444445555 5777788888778888888888777766788888754332222221 1233467899864
No 222
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.78 E-value=89 Score=24.66 Aligned_cols=108 Identities=12% Similarity=0.114 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCCchh-
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD- 89 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~G~d- 89 (138)
++..+.+++++.++++ +...+++.++.. .++++|+=+| +..-.=+...-+|+|-+|.+.. .++-.
T Consensus 224 ~~~~~~~~~~~~~~~v-----~~f~~dm~~~l~-----~aDlvI~raG---~~Tv~E~~a~G~P~Ilip~p~~-~~~~Q~ 289 (365)
T 3s2u_A 224 EITAERYRTVAVEADV-----APFISDMAAAYA-----WADLVICRAG---ALTVSELTAAGLPAFLVPLPHA-IDDHQT 289 (365)
T ss_dssp HHHHHHHHHTTCCCEE-----ESCCSCHHHHHH-----HCSEEEECCC---HHHHHHHHHHTCCEEECC------CCHHH
T ss_pred ccccceeccccccccc-----ccchhhhhhhhc-----cceEEEecCC---cchHHHHHHhCCCeEEeccCCC-CCcHHH
Q ss_pred hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHcc-CCHHHHHHHHH
Q 032570 90 VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI-ADEDLLERIRK 134 (138)
Q Consensus 90 LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~-~~~~l~~kl~~ 134 (138)
..+-.=.-.| .+.+--++..++..++..|..+ .|++.++++.+
T Consensus 290 ~NA~~l~~~G--~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 290 RNAEFLVRSG--AGRLLPQKSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp HHHHHHHTTT--SEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHCC--CEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHH
No 223
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=47.75 E-value=70 Score=22.48 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeE---------------EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh
Q 032570 5 LDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 69 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~---------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~ 69 (138)
+-...+++....|.++|.++. +-+.|..+...++.+.++.++++|+++|..-.-..+-| +.
T Consensus 47 ~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l----~~ 122 (186)
T 1m3s_A 47 RSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSI----GK 122 (186)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHH----HH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCch----HH
Confidence 336778888888888888643 46778888888888988888888888654333233333 33
Q ss_pred ccCCcEEEecCCC
Q 032570 70 NSQILVIRVPLLS 82 (138)
Q Consensus 70 ~t~~PVIgvP~~~ 82 (138)
..+. +|-+|...
T Consensus 123 ~ad~-~l~~~~~~ 134 (186)
T 1m3s_A 123 QADL-IIRMPGSP 134 (186)
T ss_dssp HCSE-EEECSCCS
T ss_pred hCCE-EEEeCCcc
Confidence 3332 45566543
No 224
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=47.38 E-value=66 Score=28.20 Aligned_cols=67 Identities=15% Similarity=-0.006 Sum_probs=46.3
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEc--cCC-CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 68 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~~~V~S--aHR-~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva 68 (138)
.+.||..-++++.+.+++.|...+..++- ..| +|+.+.++++.+.+-|++.|-...=.-...|..+.
T Consensus 138 ~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~ 207 (539)
T 1rqb_A 138 DAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAY 207 (539)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHH
T ss_pred EehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHH
Confidence 57889999999999999999877666632 222 57888888888888788865554322333454443
No 225
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=47.38 E-value=40 Score=19.58 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIK 27 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~ 27 (138)
=+.|+++...|+++|++|+..
T Consensus 11 C~~C~~~~~~l~~~~i~~~~~ 31 (75)
T 1r7h_A 11 CVQCTATKKALDRAGLAYNTV 31 (75)
T ss_dssp CHHHHHHHHHHHHTTCCCEEE
T ss_pred ChHHHHHHHHHHHcCCCcEEE
Confidence 478999999999999998764
No 226
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=47.21 E-value=1.4e+02 Score=25.72 Aligned_cols=71 Identities=10% Similarity=0.019 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhC-CCeEEEEEccCCCchHHHHHHHHh-hhcCCeEEEEecCc--CCchhHHhhhccCCcEEEec
Q 032570 9 VMNDAARTLSDFG-VPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGV--EAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 9 ~~~~~~~~L~~~g-i~~~~~V~SaHR~p~~~~~~~~~~-~~~~~~viIa~AG~--~a~L~gvva~~t~~PVIgvP 79 (138)
+++++.+.|+.-| +|+++.--..=.++++..++.+++ ..++++.+|+.-.. .+..---+.....+||+-.=
T Consensus 30 ~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~n~~~~vdgvi~~~~TFs~a~~~i~~l~~l~~PvL~~~ 104 (500)
T 4f2d_A 30 HAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFH 104 (500)
T ss_dssp HHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHHHHCTTEEEEEEECCSCCCTHHHHHHHHHCCSCEEEEE
T ss_pred HHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHhccccCCcEEEEeCCcCccHHHHHHHHHhcCCCEEEEe
Confidence 4456666676654 689998888999999999999998 56778877776543 12121122345789999853
No 227
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=47.04 E-value=44 Score=25.71 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEE
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIR 77 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIg 77 (138)
..+....+-||++.+... -.++++.++.+++++.+|+++||+ +.+.-=+|-.--+|.+=
T Consensus 119 ~~~~~i~~ll~~~i~~~~---~~~~ee~~~~i~~l~~~G~~vVVG-----~~~~~~~A~~~Gl~~vl 177 (225)
T 2pju_A 119 PALVAFQKTFNLRLDQRS---YITEEDARGQINELKANGTEAVVG-----AGLITDLAEEAGMTGIF 177 (225)
T ss_dssp HHHHHHHHHHTCCEEEEE---ESSHHHHHHHHHHHHHTTCCEEEE-----SHHHHHHHHHTTSEEEE
T ss_pred hHHHHHHHHhCCceEEEE---eCCHHHHHHHHHHHHHCCCCEEEC-----CHHHHHHHHHcCCcEEE
Confidence 345556667888655543 467899999999999999999887 23444455556666443
No 228
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=46.87 E-value=11 Score=30.87 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=40.9
Q ss_pred HHHHHHHhCCC--eEEEEEccCCC-----chHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh-hccCCcEEEec
Q 032570 13 AARTLSDFGVP--YEIKILPPHQN-----CKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-ANSQILVIRVP 79 (138)
Q Consensus 13 ~~~~L~~~gi~--~~~~V~SaHR~-----p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva-~~t~~PVIgvP 79 (138)
..+.++.||+. +++.|.+.=-+ ...+.++.+..++..++++++..+....+++.++ .....||+.+-
T Consensus 71 ~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 71 LDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHhcCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 34456788884 45544211111 2233334444456689999999887777875555 46889998875
No 229
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=46.85 E-value=59 Score=25.59 Aligned_cols=49 Identities=10% Similarity=-0.029 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHhhhcCCeEEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa------HR-~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
+.++++.+.+++.|+..+..+... .| .|+.+.++++.+.+-|++.|-..
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 456777777888898877666543 23 47888888887777788865544
No 230
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=46.55 E-value=43 Score=23.66 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEE
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 53 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~vi 53 (138)
.|.+-++++....+.+|...-+-+ ....-+++++|-.+.+.+|+.|=
T Consensus 59 ddkewaekairfvkslgaqvliii--ydqdqnrleefsrevrrrgfevr 105 (134)
T 2l69_A 59 DDKEWAEKAIRFVKSLGAQVLIII--YDQDQNRLEEFSREVRRRGFEVR 105 (134)
T ss_dssp SSHHHHHHHHHHHHHHCCCCEEEE--ECSCHHHHHHHHHHHHHTTCCEE
T ss_pred ccHHHHHHHHHHHHhcCCeEEEEE--EeCchhHHHHHHHHHHhcCceEE
Confidence 588899999999999998654433 56777899999888888888764
No 231
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=46.53 E-value=16 Score=29.04 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCC------ch-------HHHHHHH-HhhhcCCeEEEEecCcCCchhHHhhh--
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQN------CK-------EALSYAL-SAKERGIKIIIVGDGVEAHLSGVAAA-- 69 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~------p~-------~~~~~~~-~~~~~~~~viIa~AG~~a~L~gvva~-- 69 (138)
-....+++.+.|++.|+.+.+.-..+... ++ ....+.+ ....++++++|++- +.+.+-.++-.
T Consensus 18 ~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~G-GDGT~l~a~~~~~ 96 (307)
T 1u0t_A 18 ATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLG-GDGTFLRAAELAR 96 (307)
T ss_dssp GSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEE-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEEe-CCHHHHHHHHHhc
Confidence 34678899999999998765543322110 00 0111111 11234578777654 45544444433
Q ss_pred ccCCcEEEecCC
Q 032570 70 NSQILVIRVPLL 81 (138)
Q Consensus 70 ~t~~PVIgvP~~ 81 (138)
....|++|++.-
T Consensus 97 ~~~~pvlgi~~G 108 (307)
T 1u0t_A 97 NASIPVLGVNLG 108 (307)
T ss_dssp HHTCCEEEEECS
T ss_pred cCCCCEEEEeCC
Confidence 347899999853
No 232
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5
Probab=46.49 E-value=35 Score=24.15 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
+.++++.-.|++.|++|+..........+. .+|.+
T Consensus 10 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~-~~~~~ 44 (210)
T 1v2a_A 10 PPCQSAILLAKKLGITLNLKKTNVHDPVER-DALTK 44 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCHHHH-HHHHH
T ss_pred ccHHHHHHHHHHcCCCcEEEECCcccchhh-HHHHH
Confidence 678999999999999999887765333233 45543
No 233
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=46.42 E-value=72 Score=22.26 Aligned_cols=73 Identities=14% Similarity=0.029 Sum_probs=48.1
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeE---------------EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 66 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~---------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv 66 (138)
|.-+-...++.....|.++|.++. +-+.|..+...++.+.++.++++|+++| ++.+... +
T Consensus 47 G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~~~~---s- 121 (180)
T 1jeo_A 47 GVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII-AIVCECG---N- 121 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE-EEESSCC---G-
T ss_pred eecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE-EEeCCCC---h-
Confidence 333445678888888888888643 4677788888888888888888888865 4444332 2
Q ss_pred hhhccCCcEEEecC
Q 032570 67 AAANSQILVIRVPL 80 (138)
Q Consensus 67 va~~t~~PVIgvP~ 80 (138)
++...+. +|-+|.
T Consensus 122 l~~~ad~-~l~~~~ 134 (180)
T 1jeo_A 122 VVEFADL-TIPLEV 134 (180)
T ss_dssp GGGGCSE-EEECCC
T ss_pred HHHhCCE-EEEeCC
Confidence 4444443 444554
No 234
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=46.18 E-value=42 Score=26.03 Aligned_cols=65 Identities=12% Similarity=0.031 Sum_probs=46.3
Q ss_pred HHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 14 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 14 ~~~L~~~gi~~~~~V~SaHR~p-~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
...|+.+|+.|-+-..|-+|.. .++.+.++.+.+.|.++++++--. --+..+. . ....||++=+-
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~-~e~~~~~-~-~~~~iIayep~ 143 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDP-RTSLAAA-A-LGPHAVAVEPP 143 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSH-HHHHHHH-H-TCCSEEEECCG
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHh-c-CCCCEEEEcCh
Confidence 4578899999999999998886 467788888888899988887443 2232221 2 23359998554
No 235
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5
Probab=46.06 E-value=34 Score=24.27 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.++++.-.|++.|++||.......
T Consensus 10 p~~~~v~~~L~~~gi~~e~~~v~~~ 34 (209)
T 1pn9_A 10 APCRAVQMTAAAVGVELNLKLTDLM 34 (209)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCGG
T ss_pred ccHHHHHHHHHHcCCCcEEEEeccc
Confidence 6789999999999999998777653
No 236
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=45.81 E-value=28 Score=25.38 Aligned_cols=32 Identities=13% Similarity=0.059 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEA 38 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~ 38 (138)
-+.++++.-.|++.|++||.........++..
T Consensus 32 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~ 63 (241)
T 3vln_A 32 SPFAERTRLVLKAKGIRHEVININLKNKPEWF 63 (241)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEEBCTTSCCTTH
T ss_pred CcHHHHHHHHHHHcCCCCeEEecCcccCCHHH
Confidence 37899999999999999998887765555444
No 237
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=45.77 E-value=53 Score=30.41 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=41.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------CCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~Sa-------------HR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
..|.+.+++..+.+++.|||+|+.+.-. .|-|+ ..+++++..++|.++++-+
T Consensus 301 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 301 YGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKG-FPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTT-HHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCceeeChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 3466778888888999999999988743 46675 7888999988999977643
No 238
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=45.57 E-value=12 Score=28.75 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=24.0
Q ss_pred HHHHHHHHhhhcCCeEE-EEecCcCC-chhHHhhhccCCcEEEe
Q 032570 37 EALSYALSAKERGIKII-IVGDGVEA-HLSGVAAANSQILVIRV 78 (138)
Q Consensus 37 ~~~~~~~~~~~~~~~vi-Ia~AG~~a-~L~gvva~~t~~PVIgv 78 (138)
++.+.++..++.|++.| |++-..+. .+. -+......|||++
T Consensus 50 ~~~~~~~~L~~~g~d~iviaCnTa~~~~~~-~lr~~~~iPvigi 92 (254)
T 1b73_A 50 YSLECAGFLKDKGVDIIVVACNTASAYALE-RLKKEINVPVFGV 92 (254)
T ss_dssp HHHHHHHHHHTTTCSEEEECCHHHHTTSHH-HHHHHSSSCEEES
T ss_pred HHHHHHHHHHHCCCCEEEEeCchhhHHHHH-HHHHhCCCCEEee
Confidence 33444455566788854 44444442 344 4455678999995
No 239
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=45.22 E-value=19 Score=24.65 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc-CCCchHHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP-HQNCKEALSYAL 43 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p~~~~~~~~ 43 (138)
.=+.|+++.+.|++.|++|+++=..- .-+.+++.++++
T Consensus 9 ~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~ 47 (120)
T 3l78_A 9 SCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILS 47 (120)
T ss_dssp SCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHh
Confidence 34789999999999999998654433 334566666664
No 240
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.11 E-value=90 Score=25.62 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=29.1
Q ss_pred hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec
Q 032570 20 FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 20 ~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
..+|.-+++. ..-+.+++.++++.+++-|++-|++..
T Consensus 219 ~~~Pv~vKi~-p~~~~~~~~~ia~~~~~aGadgi~v~n 255 (367)
T 3zwt_A 219 HRPAVLVKIA-PDLTSQDKEDIASVVKELGIDGLIVTN 255 (367)
T ss_dssp GCCEEEEEEC-SCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CCceEEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 5788888975 566667888898888888999888754
No 241
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=44.88 E-value=38 Score=24.58 Aligned_cols=58 Identities=10% Similarity=0.095 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC----chhHHhhhccC
Q 032570 12 DAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA----HLSGVAAANSQ 72 (138)
Q Consensus 12 ~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a----~L~gvva~~t~ 72 (138)
-....|+++|++.. ..++ .. . +.+.+.++++.++++++||+..|.+. ..+-+++....
T Consensus 31 ~l~~~l~~~G~~v~~~~iv-~D-d-~~i~~al~~a~~~~~DlVittGG~s~g~~D~t~eal~~~~~ 93 (164)
T 3pzy_A 31 IITEWLAQQGFSSAQPEVV-AD-G-SPVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVAVVD 93 (164)
T ss_dssp HHHHHHHHTTCEECCCEEE-CS-S-HHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTTCS
T ss_pred HHHHHHHHCCCEEEEEEEe-CC-H-HHHHHHHHHHHhCCCCEEEECCCCCCCCCccHHHHHHHHhc
Confidence 34667889998642 2333 22 2 44555455444346899998877654 45666655443
No 242
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=44.24 E-value=66 Score=24.39 Aligned_cols=58 Identities=9% Similarity=0.081 Sum_probs=40.1
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHhh-hcCCeEEEEecCcCCchhH-HhhhccCCcEEEe
Q 032570 21 GVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIVGDGVEAHLSG-VAAANSQILVIRV 78 (138)
Q Consensus 21 gi~~~~~V~SaHR~p~~~~~~~~~~~-~~~~~viIa~AG~~a~L~g-vva~~t~~PVIgv 78 (138)
|.++++.+..-...|++..+.+++.. .++++.||...+.....+- -++.....|+|..
T Consensus 43 G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~ 102 (358)
T 3hut_A 43 GRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSP 102 (358)
T ss_dssp TBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSSHHHHHHHHHHHHHHTCCEEES
T ss_pred CeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCCcHHHHHHHHHHHHCCCcEEec
Confidence 66799999999999999988888876 6777877764433222221 1223567899964
No 243
>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*
Probab=44.13 E-value=45 Score=23.53 Aligned_cols=26 Identities=23% Similarity=0.158 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++|+.......
T Consensus 11 s~~~~~v~~~L~~~gi~~e~~~v~~~ 36 (214)
T 2v6k_A 11 SGTSHRLRIALNLKGVPYEYLAVHLG 36 (214)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCTT
T ss_pred CCcHHHHHHHHHHCCCCceEEecCCC
Confidence 36889999999999999998877764
No 244
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=44.12 E-value=43 Score=24.56 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
-+.++++.-.|++.|++|+......-....+-.+|.
T Consensus 35 sp~~~rv~~~L~~~gi~ye~~~v~~~~~~~~~~~~~ 70 (243)
T 3qav_A 35 SPPCWKVLLVLQEKKIDYDEKIISFSKKEHKSEEIL 70 (243)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHH
T ss_pred CcchHHHHHHHHHcCCCceEEEecCcccccCCHHHH
Confidence 467899999999999999998776543333334444
No 245
>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli}
Probab=43.75 E-value=32 Score=24.40 Aligned_cols=36 Identities=8% Similarity=0.053 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
-+.++++.-.|++.|++|+...........+-.+|.
T Consensus 9 s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~ 44 (215)
T 3gx0_A 9 TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL 44 (215)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEECCTTTTGGGSHHHH
T ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCCCCCChHHH
Confidence 478999999999999999998887654333334444
No 246
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=43.71 E-value=9.9 Score=29.81 Aligned_cols=45 Identities=27% Similarity=0.274 Sum_probs=26.4
Q ss_pred CCchHHHHH----HHHhhh-cCCeE-EEEecCcCC-chhHHhhhccCCcEEEe
Q 032570 33 QNCKEALSY----ALSAKE-RGIKI-IIVGDGVEA-HLSGVAAANSQILVIRV 78 (138)
Q Consensus 33 R~p~~~~~~----~~~~~~-~~~~v-iIa~AG~~a-~L~gvva~~t~~PVIgv 78 (138)
|+.+.+.++ ++...+ .|++. +|++-..++ +|. .+......||||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas~~~l~-~lr~~~~iPVigi 96 (272)
T 1zuw_A 45 RPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALD-DIQRSVGIPVVGV 96 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHHHH-HHHHHCSSCEEES
T ss_pred CCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhhHHHHH-HHHHHCCCCEEcc
Confidence 555555444 455566 78884 444444443 344 4445578999994
No 247
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=43.66 E-value=74 Score=22.33 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHh
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 45 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~ 45 (138)
.+..++..|+..||+|+..=++ ..++.-.++.+..
T Consensus 18 ~c~~aK~lL~~kgV~feEidI~--~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 18 KQQDVLGFLEANKIGFEEKDIA--ANEENRKWMRENV 52 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT--TCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHhc
Confidence 3589999999999999765554 3566666666544
No 248
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=43.37 E-value=85 Score=24.27 Aligned_cols=69 Identities=13% Similarity=0.085 Sum_probs=44.5
Q ss_pred HHHHHHHHHHh-------CCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhHH-hhhccCCcEEEe
Q 032570 10 MNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGV-AAANSQILVIRV 78 (138)
Q Consensus 10 ~~~~~~~L~~~-------gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~gv-va~~t~~PVIgv 78 (138)
.+-+...+++. |.++++.+..-...|++..+.+++..+ ++++.||...+.....+-. +......|+|.+
T Consensus 28 ~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~ 105 (385)
T 1pea_A 28 RYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYP 105 (385)
T ss_dssp HHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCchHHHHHHHHHHHhcCceEEEC
Confidence 34445556665 777788888878888888888877764 7888888754432222211 223457899864
No 249
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=43.16 E-value=9.8 Score=29.65 Aligned_cols=47 Identities=15% Similarity=0.149 Sum_probs=26.5
Q ss_pred CCchHHHHH----HHHhhhcCCeEEE-EecCcCCchhHHhhhccCCcEEEec
Q 032570 33 QNCKEALSY----ALSAKERGIKIII-VGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 33 R~p~~~~~~----~~~~~~~~~~viI-a~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
|+.+.+.++ ++..++.|++.|+ ++-..+...---+......|||++.
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPvigi~ 96 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVI 96 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeec
Confidence 455555544 4555567888544 4443332123344556789999953
No 250
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=43.15 E-value=66 Score=20.83 Aligned_cols=50 Identities=16% Similarity=0.208 Sum_probs=32.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
+.|....+.....|+..|..+.+..++ +.++..+. .+...++++|.-..+
T Consensus 12 dd~~~~~~~l~~~L~~~~~~~~v~~~~---~~~~a~~~---l~~~~~dlii~D~~l 61 (144)
T 3kht_A 12 EDNPDDIALIRRVLDRKDIHCQLEFVD---NGAKALYQ---VQQAKYDLIILDIGL 61 (144)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEES---SHHHHHHH---HTTCCCSEEEECTTC
T ss_pred eCCHHHHHHHHHHHHhcCCCeeEEEEC---CHHHHHHH---hhcCCCCEEEEeCCC
Confidence 356777788888999998876665542 33444433 345568888875443
No 251
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=43.05 E-value=58 Score=25.56 Aligned_cols=49 Identities=6% Similarity=-0.029 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHhhhcCCeEEEEe
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa------HR-~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
+.++++.+.+++.|+++++.++-. .| .|+.+.++++.+.+-|++.|-..
T Consensus 121 ~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~ 176 (298)
T 2cw6_A 121 QRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG 176 (298)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 456666777778888777666532 23 56778888887777777765444
No 252
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=43.00 E-value=15 Score=28.02 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=26.0
Q ss_pred HHHHHHHhhhcCCeEEEEecCc-CCchhHHhhhccCCcEEEec
Q 032570 38 ALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 38 ~~~~~~~~~~~~~~viIa~AG~-~a~L~gvva~~t~~PVIgvP 79 (138)
+.+.++..++.|++.|+..... +..+ --+...+..|||++.
T Consensus 65 l~~~~~~L~~~g~~~iviaCNTa~~~~-~~l~~~~~iPvi~i~ 106 (231)
T 3ojc_A 65 LSNAAISLKHAGAEVIVVCTNTMHKVA-DDIEAACGLPLLHIA 106 (231)
T ss_dssp HHHHHHHHHHHTCCEEEECSSGGGGGH-HHHHHHHCSCBCCHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCchHHHH-HHHHHhCCCCEeccH
Confidence 3344455566788866555544 4444 556677889999973
No 253
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=42.84 E-value=9.7 Score=30.13 Aligned_cols=71 Identities=21% Similarity=0.121 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEE-c-----cCCCchHHHHH----HHHhhhcCCeEE-EEecCcCCchhHHhhhccCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKIL-P-----PHQNCKEALSY----ALSAKERGIKII-IVGDGVEAHLSGVAAANSQIL 74 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~-S-----aHR~p~~~~~~----~~~~~~~~~~vi-Ia~AG~~a~L~gvva~~t~~P 74 (138)
.+.+.+++.+.+-.-. -+.+. . --|+.+.+.++ ++..++.|+++| |++-..+...---+...+..|
T Consensus 34 gltv~~~i~~~~P~~~---~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~~~l~~lr~~~~iP 110 (286)
T 2jfq_A 34 GLTVAKEIMRQLPNET---IYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIS 110 (286)
T ss_dssp THHHHHHHHHHCTTCC---EEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHHHHHHHHHCSSE
T ss_pred cHHHHHHHHHHCCCcc---EEEeccCCCCCcCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhHHHHHHHHHhCCCC
Confidence 5677777776653221 11111 1 12555555544 455556788854 444444431233444567899
Q ss_pred EEEec
Q 032570 75 VIRVP 79 (138)
Q Consensus 75 VIgvP 79 (138)
|||+.
T Consensus 111 Vigi~ 115 (286)
T 2jfq_A 111 VIGVI 115 (286)
T ss_dssp EEESH
T ss_pred EEecc
Confidence 99954
No 254
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5
Probab=42.60 E-value=46 Score=23.71 Aligned_cols=47 Identities=9% Similarity=0.033 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
+.++++.-.|++.|++||.......+...+-.+|.+..-.....+++
T Consensus 18 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~ 64 (221)
T 1e6b_A 18 SCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALV 64 (221)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHCTTCCSSEEE
T ss_pred CchHHHHHHHHHcCCCCEEEEecCCcccccCHHHHhhCCCCCCCEEE
Confidence 68899999999999999988777643222223344322223344555
No 255
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=42.43 E-value=55 Score=26.65 Aligned_cols=47 Identities=13% Similarity=0.041 Sum_probs=30.1
Q ss_pred cCCcEEEecCCCCCCCchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHccCCHHHHHHH
Q 032570 71 SQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERI 132 (138)
Q Consensus 71 t~~PVIgvP~~~~~~~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~~~~~l~~kl 132 (138)
.+...|++|.... -.|.-++.++.-+++..+-.+++..-+++-.+++
T Consensus 306 ipt~~igvp~~~~---------------Hs~~E~~~~~Di~~~~~ll~~~l~~l~~~~~~~~ 352 (355)
T 3kl9_A 306 VPSTTIGVCARYI---------------HSHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLI 352 (355)
T ss_dssp CCEEEEEEEEBSC---------------SSSCEEEEHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCEEEEccCcCCC---------------CCcceEeeHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 4556778887642 2345567777888888777777766665544444
No 256
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=42.24 E-value=12 Score=27.43 Aligned_cols=29 Identities=3% Similarity=0.015 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCch
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCK 36 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~ 36 (138)
|.++++.-+|++.|++||.........++
T Consensus 32 P~~~rVr~~L~e~gi~~e~~~v~~~~~~~ 60 (225)
T 4glt_A 32 PYARKVRVVAAEKRIDVDMVLVVLADPEC 60 (225)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCSSS
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCCCH
Confidence 88999999999999999988776544443
No 257
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=42.05 E-value=48 Score=25.84 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa------HR-~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
+++.++++.+.+++.|++.+..+... .| .|+.+.++++.+.+-|++.|-..
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 175 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG 175 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec
Confidence 44555666667777777766555433 23 46777777776666666654433
No 258
>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*
Probab=41.98 E-value=57 Score=23.48 Aligned_cols=50 Identities=8% Similarity=0.101 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
-+.++++.-.|++.|++|+.......+....-.+|.+..-....-+++.-
T Consensus 18 s~~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~ 67 (235)
T 3n5o_A 18 SSCSGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLNPTNTVPLLVVS 67 (235)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTTCCSCEEEEE
T ss_pred CcHHHHHHHHHHHcCCccEEEecccccccccCHHHHhcCCCCCCCEEEeC
Confidence 37899999999999999998887653332333344432222334455443
No 259
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=41.82 E-value=67 Score=29.83 Aligned_cols=52 Identities=15% Similarity=0.289 Sum_probs=41.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEc-------------cCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILP-------------PHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~S-------------aHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
..|.+.+++..+.+++.|||+|+.+.- ..|-| ...+++++..++|.++++-+
T Consensus 329 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FP-dp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 329 YKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFN-GLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTT-THHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcceEChhhCC-CHHHHHHHHHHCCCEEEEEe
Confidence 346778888888999999999998874 24566 67888898988999977654
No 260
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=41.70 E-value=54 Score=25.31 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 53 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~vi 53 (138)
++.++++.+.++.+|.+.++-.+|. |++.++.+... -|++++
T Consensus 142 ~~~v~~i~~~~~~~~~~t~ilaAS~-R~~~~v~~~a~----~G~d~~ 183 (212)
T 3r8r_A 142 LDLISEVKQIFDIHGLDTQIIAASI-RHPQHVTEAAL----RGAHIG 183 (212)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEBSC-CSHHHHHHHHH----TTCSEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEecC-CCHHHHHHHHH----cCCCEE
Confidence 6789999999999999999888875 88888876542 466643
No 261
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=41.67 E-value=26 Score=28.36 Aligned_cols=60 Identities=10% Similarity=-0.010 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEc---cCCC-chHHHHHHHHhhhcCCeEEEEecCcCCchhHHh
Q 032570 8 PVMNDAARTLSDFGVPYEIKILP---PHQN-CKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~S---aHR~-p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv 67 (138)
+.++++.+.+++.|....+.+.. ..|. |+.+.++++.+.+-|++.|-...=.-...|.-+
T Consensus 137 ~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v 200 (337)
T 3ble_A 137 TDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEET 200 (337)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHH
Confidence 56777777888999877766654 4453 677888888888888886655443333345443
No 262
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=41.65 E-value=12 Score=32.52 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=30.9
Q ss_pred CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHH--hhh-----ccCCcEEEecCCC
Q 032570 33 QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA-----NSQILVIRVPLLS 82 (138)
Q Consensus 33 R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gv--va~-----~t~~PVIgvP~~~ 82 (138)
|.+....+.++++++.+++.+|++-|-.. +-+. ++- ...+||||||-.-
T Consensus 173 R~~~~~~~i~~~l~~~~Id~LvvIGGdgS-~~~A~~L~e~~~~~g~~i~vVGIPkTI 228 (487)
T 2hig_A 173 RGPQDPKEMVDTLERLGVNILFTVGGDGT-QRGALVISQEAKRRGVDISVFGVPKTI 228 (487)
T ss_dssp CSCCCHHHHHHHHHHHTCSEEEEEECHHH-HHHHHHHHHHHHHHTCCCEEEEEECCT
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEeCCCch-HHHHHHHHHHHHHhCCCceEEeccccc
Confidence 44445567777787778888887766432 2222 221 1368999999863
No 263
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=41.12 E-value=81 Score=23.09 Aligned_cols=60 Identities=12% Similarity=-0.003 Sum_probs=36.6
Q ss_pred HHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcC----CchhHHhhhccCC
Q 032570 12 DAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE----AHLSGVAAANSQI 73 (138)
Q Consensus 12 ~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~----a~L~gvva~~t~~ 73 (138)
-....|+++|+... ..++ --.++.+.+.++++-++ +++++|+..|.+ ...+-+++....+
T Consensus 44 ~L~~~l~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~~D~t~eal~~~~~~ 109 (178)
T 2pjk_A 44 IIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKLFDR 109 (178)
T ss_dssp HHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHHGGGCSE
T ss_pred HHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcchHHHHHHHhcc
Confidence 35667889998643 3333 23455666655555444 589999887764 4566666655443
No 264
>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A
Probab=41.02 E-value=44 Score=24.69 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
-|.++++.-.|++.|++||............-.+|.+..-.....+++
T Consensus 18 sp~~rkv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~gkVPvL~ 65 (247)
T 2c3n_A 18 SQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALK 65 (247)
T ss_dssp SHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHCTTCCSCEEE
T ss_pred ChhHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCcCcEEE
Confidence 367889999999999999988776543322333444322223344554
No 265
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=41.02 E-value=1.3e+02 Score=23.80 Aligned_cols=60 Identities=7% Similarity=0.063 Sum_probs=47.3
Q ss_pred HHHhCCCeEEEEEc--cC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh-----hccCCcEEE
Q 032570 17 LSDFGVPYEIKILP--PH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-----ANSQILVIR 77 (138)
Q Consensus 17 L~~~gi~~~~~V~S--aH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva-----~~t~~PVIg 77 (138)
+++||+.. +.+.+ .. -+|+++.++++..+++++++|+.=...+.-+.-.++ -.+..||..
T Consensus 211 a~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~~~~A~e~gv~v~~ 279 (313)
T 1toa_A 211 SRAYGFEV-KGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNVEALRDAVQARGHVVQIGG 279 (313)
T ss_dssp HHHHTCEE-EEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEEETTSCTHHHHHHHHHHHTTTCCCEEEE
T ss_pred HHHCCCeE-EEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHccchhhhcCCceee
Confidence 45678763 33432 23 477899999999999999999999999999999998 788889865
No 266
>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}
Probab=40.95 E-value=46 Score=24.18 Aligned_cols=26 Identities=23% Similarity=0.006 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++||.......
T Consensus 31 sp~~~~vr~~L~~~gi~~e~~~v~~~ 56 (230)
T 4hz2_A 31 SGNCWKAAQILSLTGHDFEWVETSSG 56 (230)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCSS
T ss_pred CccHHHHHHHHHHcCCCceEEEecCC
Confidence 36789999999999999998887763
No 267
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=40.84 E-value=94 Score=27.68 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEcc-------------CCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~Sa-------------HR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
.|.+.+++..+.+++.|||+|+-+.-. +|-|+ ..+++++..++|.++++-+
T Consensus 187 ~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~~~~~dft~d~~~FPd-p~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 187 YPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPE-PKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEEEECGGGSBTTBTTCCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCcceEEEecceecCCccceEChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 466778888888899999999988753 46666 6788888888999977665
No 268
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=40.69 E-value=43 Score=25.90 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=45.8
Q ss_pred HHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 14 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 14 ~~~L~~~gi~~~~~V~SaHR~p-~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
...|+.+|+.|-+-..|.+|.. .++.+.++.+.+.|.++++++--. --+..+. .....||++=+-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~-~e~~~~~--~~~~~iIayep~ 146 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNP-AVSAAVA--ALNPDYVAVEPP 146 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSH-HHHHHHH--TTCCSEEEECCT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHh--cCCCCEEEEeCh
Confidence 4578899999999999998876 467778888888899998887543 2222221 123359998554
No 269
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=40.65 E-value=87 Score=22.66 Aligned_cols=62 Identities=8% Similarity=0.021 Sum_probs=38.8
Q ss_pred HHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcC----CchhHHhhhccCCcEE
Q 032570 13 AARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE----AHLSGVAAANSQILVI 76 (138)
Q Consensus 13 ~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~----a~L~gvva~~t~~PVI 76 (138)
....|+++|+... ..++ --.++.+.+.++++.++ ++++||+..|.+ ...+-+++....+++.
T Consensus 33 l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~ea~~~~~~~~l~ 100 (172)
T 1mkz_A 33 LRDSAQEAGHHVVDKAIV--KENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVE 100 (172)
T ss_dssp HHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHHHHGGGCSEECH
T ss_pred HHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHHHHHHHhcccCC
Confidence 5678899998643 3333 23456666666666554 689999888775 3456666655444433
No 270
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=40.45 E-value=32 Score=24.33 Aligned_cols=26 Identities=19% Similarity=0.183 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++|+.......
T Consensus 12 s~~~~~v~~~L~~~gi~~e~~~v~~~ 37 (210)
T 3m3m_A 12 SGNCYKIKLMLNLLGLPYEWQAVDIL 37 (210)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCcHHHHHHHHHHcCCCCEEEEecCC
Confidence 46789999999999999998887763
No 271
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=40.34 E-value=1e+02 Score=23.75 Aligned_cols=55 Identities=4% Similarity=0.089 Sum_probs=30.9
Q ss_pred CeEEEEEccCCCch-HHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEec
Q 032570 23 PYEIKILPPHQNCK-EALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVP 79 (138)
Q Consensus 23 ~~~~~V~SaHR~p~-~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP 79 (138)
.|.+.+...+...+ +..++++....++++-||...-... ...+. ....+||+-+=
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~--~~~~~~l~~~~iPvV~i~ 158 (366)
T 3h5t_A 101 DTQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSVAKG--DPHIDAIRARGLPAVIAD 158 (366)
T ss_dssp SCEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESCCTT--CHHHHHHHHHTCCEEEES
T ss_pred hCCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecCCCC--hHHHHHHHHCCCCEEEEC
Confidence 55666665554332 4566777777778886666533211 12222 23578998763
No 272
>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}
Probab=40.20 E-value=37 Score=24.26 Aligned_cols=25 Identities=20% Similarity=0.275 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.++++.-.|++.|++|+.......
T Consensus 13 ~~~~~v~~~L~~~gi~~e~~~v~~~ 37 (216)
T 3ay8_A 13 GPSRGALLAARAIGIPIQIEIVNLF 37 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTT
T ss_pred ccHHHHHHHHHHcCCCceEEEeccc
Confidence 6789999999999999998877653
No 273
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=40.05 E-value=78 Score=23.18 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCc------hHHHHHHHHhhhcCCeEEEEec
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNC------KEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p------~~~~~~~~~~~~~~~~viIa~A 57 (138)
+.++.+.++.|++.|+.+++... |.- ..+.+-.+.+.+.++++||-+=
T Consensus 32 l~ia~~l~~~L~~~G~~V~v~lt---R~d~~~~~~~~L~~R~~~An~~~aDlfISIH 85 (180)
T 3qay_A 32 KSLAPVLADTFRKEGHKVDVIIC---PEKQFKTKNEEKSYKIPRVNSGGYDLLIELH 85 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC---CSSCCSSTTHHHHHHHHHHHHSCCSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcceEEEC---CCCCccccccCHHHHHHHHHhcCCCEEEEee
Confidence 67889999999999976434332 321 1355555666667899999763
No 274
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=40.03 E-value=88 Score=21.43 Aligned_cols=78 Identities=18% Similarity=0.049 Sum_probs=48.8
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh--hcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK--ERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~--~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
|+.+-..++..++.|++.|..|++..-..--.++...+.++... ...-++++.+--+-+.++-.+|...+..+..+=.
T Consensus 13 ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~~~~~~l~~~~~~~~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~ 92 (202)
T 4fle_A 13 SSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYPAEAAEMLESIVMDKAGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNP 92 (202)
T ss_dssp CCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSHHHHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHTTCCEEEESC
T ss_pred CCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCcEEEEEEChhhHHHHHHHHHhcccchheee
Confidence 33333345566777888887776654444444566555554432 2344688888777788888888877777666543
No 275
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=39.57 E-value=1e+02 Score=24.62 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=44.7
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 60 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~ 60 (138)
||+.+. ..+ +...+.++|++.-.+++.--|+.+++.+++..+...|++=|.+..|=-
T Consensus 54 g~~r~~-t~~-~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 110 (310)
T 3apt_A 54 GSTRER-SVA-WAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDP 110 (310)
T ss_dssp TCSHHH-HHH-HHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCcchh-HHH-HHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 444443 333 344445899999999999999999999999999888999888888864
No 276
>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*
Probab=39.53 E-value=32 Score=24.38 Aligned_cols=28 Identities=25% Similarity=0.462 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQN 34 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~ 34 (138)
-+.++++.-.|++.|++||.........
T Consensus 11 sp~~~~v~~~l~~~gi~~e~~~v~~~~~ 38 (213)
T 3m0f_A 11 SPYVRRVAISLKSLGLPFEHHSLSVFST 38 (213)
T ss_dssp SHHHHHHHHHHHHHTCCCEEECCCTTTT
T ss_pred CCcHHHHHHHHHHCCCCcEEEEecCCCC
Confidence 3789999999999999999887765443
No 277
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=39.50 E-value=12 Score=29.65 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc-----CCCchHHHH----HHHHhhhcCCeEEEEecCc-CC-chhHHhhhccCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKEALS----YALSAKERGIKIIIVGDGV-EA-HLSGVAAANSQIL 74 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa-----HR~p~~~~~----~~~~~~~~~~~viIa~AG~-~a-~L~gvva~~t~~P 74 (138)
.+.+.+++.+.+-.-.+-| ---.+ -|+.+.+.+ .++..++.|++.|+..-.. ++ +|. -+......|
T Consensus 36 gltv~~~i~~~~P~~~~iy--~~D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~~l~-~lr~~~~iP 112 (290)
T 2vvt_A 36 GLTVLKEALKQLPNERLIY--LGDTARCPYGPRPAEQVVQFTWEMADFLLKKRIKMLVIACNTATAVALE-EIKAALPIP 112 (290)
T ss_dssp THHHHHHHHHHCTTSCEEE--EECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHH-HHHHHCSSC
T ss_pred HHHHHHHHHHHCCCccEEE--ecccccCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHHHHH-HHHHhCCCC
Confidence 3778888877664322111 01111 244444444 4455566788855443333 21 233 344567899
Q ss_pred EEEec
Q 032570 75 VIRVP 79 (138)
Q Consensus 75 VIgvP 79 (138)
||++.
T Consensus 113 Vigii 117 (290)
T 2vvt_A 113 VVGVI 117 (290)
T ss_dssp EEESS
T ss_pred EEccc
Confidence 99953
No 278
>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*
Probab=39.29 E-value=33 Score=24.23 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
-+.++++.-.|++.|++|+...........+-.+|.
T Consensus 10 s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~ 45 (209)
T 3ein_A 10 SSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFL 45 (209)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHH
T ss_pred CccHHHHHHHHHHcCCCcEEEEcccccCCcCCHHHH
Confidence 367899999999999999988877654433333443
No 279
>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}
Probab=39.25 E-value=32 Score=25.06 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
+.++++.-.|++.|++||...........+..+|.
T Consensus 31 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~ 65 (244)
T 4ikh_A 31 PNGVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFL 65 (244)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTTTTTSSHHHH
T ss_pred CChHHHHHHHHHcCCCceEEEecCCCCCcCChHHH
Confidence 78999999999999999998877543333333443
No 280
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=39.24 E-value=28 Score=27.70 Aligned_cols=68 Identities=9% Similarity=0.086 Sum_probs=40.6
Q ss_pred CCCcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 1 MESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
+|+..|.+.++++.+. ++-+ .....-..+..++..+++ ..+++|+.-.+..||+ +....|+|++--
T Consensus 223 ~g~~~e~~~~~~i~~~---~~~~--~~~l~g~~sl~e~~ali~-----~a~~~i~~DsG~~HlA----aa~g~P~v~lfg 288 (349)
T 3tov_A 223 FGGPMDLEMVQPVVEQ---METK--PIVATGKFQLGPLAAAMN-----RCNLLITNDSGPMHVG----ISQGVPIVALYG 288 (349)
T ss_dssp CCCTTTHHHHHHHHHT---CSSC--CEECTTCCCHHHHHHHHH-----TCSEEEEESSHHHHHH----HTTTCCEEEECS
T ss_pred EeCcchHHHHHHHHHh---cccc--cEEeeCCCCHHHHHHHHH-----hCCEEEECCCCHHHHH----HhcCCCEEEEEC
Confidence 4666776666555432 2211 122222345555655553 4789999877777874 446789999865
Q ss_pred CC
Q 032570 81 LS 82 (138)
Q Consensus 81 ~~ 82 (138)
++
T Consensus 289 ~t 290 (349)
T 3tov_A 289 PS 290 (349)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 281
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=39.23 E-value=54 Score=25.32 Aligned_cols=72 Identities=19% Similarity=0.150 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCC--CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc--cCCcEEEecC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN--SQILVIRVPL 80 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR--~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~--t~~PVIgvP~ 80 (138)
....+++.+.|++.|+.+.+.-..+.. .+. ...+......++++++|+ .|+.+.+-.++-+. ...|++|+|.
T Consensus 20 ~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~vi~-~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 20 LTTHEMLYRWLCDQGYEVIVEQQIAHELQLKN-VPTGTLAEIGQQADLAVV-VGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp -CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSS-CCEECHHHHHHHCSEEEE-CSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhccccc-ccccchhhcccCCCEEEE-EcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 356788888999999865432111100 000 000000111234777766 46666666666443 4789999984
No 282
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=38.98 E-value=44 Score=24.59 Aligned_cols=33 Identities=18% Similarity=0.068 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEAL 39 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~ 39 (138)
-+.++++.-.|++.|++||.........++...
T Consensus 35 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~ 67 (246)
T 3rbt_A 35 NPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFR 67 (246)
T ss_dssp CHHHHHHHHHHHHTTBCEEEEECCSSSCCHHHH
T ss_pred CccHHHHHHHHHHcCCCceEEEeCcccCCHHHH
Confidence 378999999999999999988877665555443
No 283
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=38.93 E-value=49 Score=25.06 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKE 37 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~ 37 (138)
.-+.++++.-.|++.|++|+.........++.
T Consensus 34 ~~p~~~rv~~~L~~~gi~ye~~~v~~~~~~~~ 65 (267)
T 2ahe_A 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPAD 65 (267)
T ss_dssp SCHHHHHHHHHHHHHTCCCEEEEECTTSCCHH
T ss_pred CCchHHHHHHHHHHcCCCCEEEEeCcccChHH
Confidence 35889999999999999999887765433433
No 284
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=38.76 E-value=15 Score=28.98 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=28.7
Q ss_pred CCchHHHHHH----HHhhhcCCeEEEEecCcCCchh-HHhhhcc-CCcEEEe
Q 032570 33 QNCKEALSYA----LSAKERGIKIIIVGDGVEAHLS-GVAAANS-QILVIRV 78 (138)
Q Consensus 33 R~p~~~~~~~----~~~~~~~~~viIa~AG~~a~L~-gvva~~t-~~PVIgv 78 (138)
|+.+++.++. +..++.|++.||..-..+..+. -.+.... ..||||+
T Consensus 49 ~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~al~~lr~~~~~iPvigi 100 (268)
T 3out_A 49 KSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDV 100 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHTTSCEEEH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHHHhcCCCCEEec
Confidence 7777777766 3456678996555444333222 3445566 8999995
No 285
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=38.57 E-value=63 Score=22.67 Aligned_cols=23 Identities=22% Similarity=0.298 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKIL 29 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~ 29 (138)
=+.|+++...|+++|++|+..=+
T Consensus 59 Cp~C~~~k~~L~~~~i~~~~vdI 81 (146)
T 2ht9_A 59 CSYCTMAKKLFHDMNVNYKVVEL 81 (146)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEEG
T ss_pred ChhHHHHHHHHHHcCCCeEEEEC
Confidence 37899999999999999865433
No 286
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=38.51 E-value=1.2e+02 Score=24.08 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=47.5
Q ss_pred HHHhCCCeEEEEEc--cC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEE
Q 032570 17 LSDFGVPYEIKILP--PH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIR 77 (138)
Q Consensus 17 L~~~gi~~~~~V~S--aH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIg 77 (138)
+++||+.. +.+.+ .. -+|+++.++++..+++++++|+.=...+.-+.-.+|-.+..||.+
T Consensus 204 a~~yGl~~-~~~~~i~~~~ePs~~~l~~l~~~ik~~~v~~If~e~~~~~k~~~~ia~e~g~~v~~ 267 (307)
T 3ujp_A 204 ARDYGMEE-IYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFGG 267 (307)
T ss_dssp HHHTTCEE-EEEESSCCSSCCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHTTTTTCCEEEE
T ss_pred HHHCCCcE-EEeeccCCCCCCCHHHHHHHHHHHHhcCCcEEEEeCCCChHHHHHHHHHhCCceee
Confidence 35788873 33432 23 367899999999999999999999999999999999999999864
No 287
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*
Probab=38.29 E-value=51 Score=23.63 Aligned_cols=25 Identities=20% Similarity=0.110 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.++++.-.|++.|++||.......
T Consensus 22 p~~~~v~~~L~~~gi~~e~~~v~~~ 46 (223)
T 2cz2_A 22 SCSWRVRIALALKGIDYEIVPINLI 46 (223)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCSS
T ss_pred ChHHHHHHHHHhcCCCCeEEEeecc
Confidence 6889999999999999998877654
No 288
>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}
Probab=38.17 E-value=30 Score=24.96 Aligned_cols=26 Identities=12% Similarity=0.005 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++|+.......
T Consensus 12 sp~~~~vr~~L~~~gi~~e~~~v~~~ 37 (225)
T 3m8n_A 12 SGNSYKVRLALALLDAPYRAVEVDIL 37 (225)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEEEeCCC
Confidence 36789999999999999999887663
No 289
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=37.97 E-value=81 Score=23.16 Aligned_cols=46 Identities=7% Similarity=0.022 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
+.+..++..+.++++|.|..++.. +.++++.++++.+.....++++
T Consensus 109 q~~~~~~~~~~a~~~~~pv~iH~~---~~~~~~~~~l~~~~~p~~~~v~ 154 (265)
T 1yix_A 109 QQESFIHHIQIGRELNKPVIVHTR---DARADTLAILREEKVTDCGGVL 154 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE---SCHHHHHHHHHHTTGGGTCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEec---CchHHHHHHHHhcCCCCCCEEE
Confidence 346678888888999999988876 4567888887765322345654
No 290
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Probab=37.70 E-value=23 Score=24.91 Aligned_cols=35 Identities=17% Similarity=0.108 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
+.++++.-.|++.|++|+.......+...+-.+|.
T Consensus 12 p~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~ 46 (209)
T 1axd_A 12 WNLTRCATALEEAGSDYEIVPINFATAEHKSPEHL 46 (209)
T ss_dssp TTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHH
T ss_pred chHHHHHHHHHhcCCCCEEEeccccccCcCChHHH
Confidence 57889999999999999988777644333334444
No 291
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=37.60 E-value=26 Score=25.46 Aligned_cols=27 Identities=7% Similarity=0.078 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
.-+.++++.-.|++.|++||.......
T Consensus 31 ~sp~~~~vr~~L~~~gi~ye~~~v~~~ 57 (229)
T 4iel_A 31 PSINVRKVLWLCTELNLPFEQEDWGAG 57 (229)
T ss_dssp TCHHHHHHHHHHHHHTCCEEEECCC--
T ss_pred CCcchHHHHHHHHHCCCCcEEEEecCC
Confidence 347799999999999999998876653
No 292
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A
Probab=37.52 E-value=30 Score=25.81 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=23.8
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
|...-|.+.++.-.|++.|++||+.....-
T Consensus 38 s~~~sP~~~rv~~~L~~~gi~ye~~~v~~~ 67 (250)
T 3fy7_A 38 SVGHCPSCQRLFMVLLLKGVPFTLTTVDTR 67 (250)
T ss_dssp SBCSCHHHHHHHHHHHHHTCCCEEEEEC--
T ss_pred CCCCChHHHHHHHHHHHcCCccEEEECCCc
Confidence 335578999999999999999998777653
No 293
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=37.37 E-value=41 Score=27.18 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 63 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L 63 (138)
.+.++..|...|.... |...||.++.+.+++ +.++++|+..|...-+
T Consensus 171 G~p~A~lL~~~g~~at--Vtv~h~~t~~L~~~~-----~~ADIVI~Avg~p~~I 217 (281)
T 2c2x_A 171 GRPLGLLLTRRSENAT--VTLCHTGTRDLPALT-----RQADIVVAAVGVAHLL 217 (281)
T ss_dssp HHHHHHHHTSTTTCCE--EEEECTTCSCHHHHH-----TTCSEEEECSCCTTCB
T ss_pred HHHHHHHHhcCCCCCE--EEEEECchhHHHHHH-----hhCCEEEECCCCCccc
Confidence 3445555555521233 444599999888877 3589999999966543
No 294
>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*
Probab=37.31 E-value=40 Score=24.15 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQ 33 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR 33 (138)
-+.++++.-.|++.|++||........
T Consensus 12 s~~~~~v~~~L~~~gi~~e~~~v~~~~ 38 (221)
T 2imi_A 12 SPPCRAVELTAKALGLELEQKTINLLT 38 (221)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred CccHHHHHHHHHHcCCCceEEEccccc
Confidence 367899999999999999988776543
No 295
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=37.19 E-value=80 Score=24.49 Aligned_cols=21 Identities=5% Similarity=-0.240 Sum_probs=9.1
Q ss_pred chHHHHHHHHhhhcCCeEEEE
Q 032570 35 CKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 35 p~~~~~~~~~~~~~~~~viIa 55 (138)
.+++.++++.+++.|++.|++
T Consensus 171 ~~~~~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 171 LVHFDIMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHHHHHHHHTTSCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEe
Confidence 334444444444444444443
No 296
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5
Probab=37.16 E-value=50 Score=23.70 Aligned_cols=25 Identities=20% Similarity=0.129 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
-+.++++.-.|++.|++|+......
T Consensus 15 sp~~~~v~~~L~~~gi~~e~~~v~~ 39 (230)
T 1gwc_A 15 SPFVTRVKLALALKGLSYEDVEEDL 39 (230)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred ChHHHHHHHHHHHcCCCCeEEeccc
Confidence 3688999999999999999887765
No 297
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=37.13 E-value=35 Score=27.28 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=33.9
Q ss_pred HHHHHHhhh-cCCeEEEEecCcCCchhHHhhhc----cCCcEEEecCCCC
Q 032570 39 LSYALSAKE-RGIKIIIVGDGVEAHLSGVAAAN----SQILVIRVPLLSE 83 (138)
Q Consensus 39 ~~~~~~~~~-~~~~viIa~AG~~a~L~gvva~~----t~~PVIgvP~~~~ 83 (138)
.|+.++... ..++.|++..|.-+.+.|+..+. ....||+|.+...
T Consensus 188 ~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~ 237 (342)
T 4d9b_A 188 LEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRS 237 (342)
T ss_dssp HHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSC
T ss_pred HHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCc
Confidence 445555532 36899999999999999998764 3578999998765
No 298
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=37.09 E-value=23 Score=26.50 Aligned_cols=78 Identities=9% Similarity=0.092 Sum_probs=40.9
Q ss_pred CCCcCCHHHHHHHHHHHH-HhCCCe--EEEEEcc--------CCCchHHHHH----HHHhhhcCCeEEEEecC-cCCchh
Q 032570 1 MESDLDLPVMNDAARTLS-DFGVPY--EIKILPP--------HQNCKEALSY----ALSAKERGIKIIIVGDG-VEAHLS 64 (138)
Q Consensus 1 mGS~SD~~~~~~~~~~L~-~~gi~~--~~~V~Sa--------HR~p~~~~~~----~~~~~~~~~~viIa~AG-~~a~L~ 64 (138)
||..|=..+.+++.+..+ ..|=.+ ++-+.+. ++..+...++ ++..++.|+++|+..-. .+..+
T Consensus 10 mgp~at~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~g~d~iviaCnTa~~~~- 88 (226)
T 2zsk_A 10 TTPESTLYYYKKYIEISREKFEKYFYPELIIYSINFKEFFQNPEGWEGRKKILINAAKALERAGAELIAFAANTPHLVF- 88 (226)
T ss_dssp SSHHHHHHHHHHHHHHHHHHSSTTCCCCEEEEECCTHHHHTCTTHHHHHHHHHHHHHHHHHHHTCSEEEESSSGGGGGH-
T ss_pred cCHHHHHHHHHHHHHHHHHhcCCccCCeeEEeCCCHHHHHhhcCCcchHHHHHHHHHHHHHHcCCCEEEECCCcHHHHH-
Confidence 455555667777766654 344321 2333333 3334443333 34445668885544433 33334
Q ss_pred HHhhhccCCcEEEec
Q 032570 65 GVAAANSQILVIRVP 79 (138)
Q Consensus 65 gvva~~t~~PVIgvP 79 (138)
--+...+..|||++-
T Consensus 89 ~~l~~~~~iPvi~i~ 103 (226)
T 2zsk_A 89 DDVQREVNVPMVSII 103 (226)
T ss_dssp HHHHHHCSSCBCCHH
T ss_pred HHHHHhCCCCEeccH
Confidence 455566789999853
No 299
>2vs7_A I-DMOI, homing endonuclease I-DMOI; protein/nucleic acid crystallography; 2.05A {Desulfurococcus mobilis} PDB: 2vs8_A 1b24_A
Probab=36.83 E-value=29 Score=25.93 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=22.3
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEE
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKI 28 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V 28 (138)
+++|.+.++.+...|..|||...+..
T Consensus 128 ~s~s~~ll~~v~~lL~~lGI~s~i~~ 153 (199)
T 2vs7_A 128 WNKNKALLEIVSRWLNNLGVRNTIHL 153 (199)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EECcHHHHHHHHHHHHHCCCeEEEEE
Confidence 46899999999999999999976543
No 300
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=36.79 E-value=99 Score=23.58 Aligned_cols=50 Identities=12% Similarity=0.081 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh--------------cCCeEEEEecCcCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--------------RGIKIIIVGDGVEA 61 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~--------------~~~~viIa~AG~~a 61 (138)
...+.+...|.+.| +++.|. +|++++..++.+.... .+++++|..+|...
T Consensus 129 g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 129 GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI 192 (271)
T ss_dssp HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGG
T ss_pred HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCC
Confidence 35667778888888 466665 7999998888765421 26788888887543
No 301
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=36.69 E-value=84 Score=22.99 Aligned_cols=51 Identities=12% Similarity=0.046 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEE-ccC--------------------CCchHHHHHHHHhhhcCCeEEEEec
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKIL-PPH--------------------QNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~-SaH--------------------R~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
|.+.+++-.+.++++|++ -+||- +.+ ...+++.++++.+.+.|..|++..-
T Consensus 40 ~~~~~~~~l~~~k~~G~N-~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 40 NKNRIEPEFKKLHDAGGN-SMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHHHTTCC-EEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCc-EEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 566788888899999998 56662 111 1235667788888889999998763
No 302
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=36.68 E-value=83 Score=23.46 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC----chhHHhhhccC
Q 032570 12 DAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA----HLSGVAAANSQ 72 (138)
Q Consensus 12 ~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a----~L~gvva~~t~ 72 (138)
-....|+++|+... ..++ --.++.+.+-++++..+++++||+..|.+- ..+-+++....
T Consensus 53 ~L~~~L~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~t~eal~~l~~ 116 (185)
T 3rfq_A 53 LVTELLTEAGFVVDGVVAV--EADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDVTPESTREILD 116 (185)
T ss_dssp HHHHHHHHTTEEEEEEEEE--CSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTTCS
T ss_pred HHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCcccHHHHHHHHhc
Confidence 35667889997643 2333 234555666555553356899998877653 45555654433
No 303
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.48 E-value=1e+02 Score=22.63 Aligned_cols=53 Identities=13% Similarity=-0.120 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
+....++.++.|++.|+.+...-...-+..+.+.+.++.++.-|++.+++-.|
T Consensus 59 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 59 TDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 34556788888888888643211112266677777777777777777776544
No 304
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=36.46 E-value=1.1e+02 Score=23.45 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHHH-hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSD-FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~-~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
|.....+..+.+++ .++|.-+++..-. ....++++.+++.|++.|++.
T Consensus 148 ~~~~~~eii~~v~~~~~~pv~vk~~~~~---~~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 148 DPEVAAALVKACKAVSKVPLYVKLSPNV---TDIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECSCS---SCSHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCh---HHHHHHHHHHHHcCCCEEEEe
Confidence 44555555555554 4888777776322 233455555566678877763
No 305
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=36.45 E-value=1e+02 Score=21.96 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~--------------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
...++.....|.++|+++. +-+.|.-+...++.+.++.++++|+++|..-
T Consensus 57 ~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT 126 (201)
T 3fxa_A 57 GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVT 126 (201)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEE
Confidence 6778888888888888643 3456666667777777777777777655443
No 306
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=36.13 E-value=65 Score=21.47 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=21.7
Q ss_pred chHHHHHHHHhhhcCCe-EEEEecCcCC-chhHHhh--hccCCcEEEecCC
Q 032570 35 CKEALSYALSAKERGIK-IIIVGDGVEA-HLSGVAA--ANSQILVIRVPLL 81 (138)
Q Consensus 35 p~~~~~~~~~~~~~~~~-viIa~AG~~a-~L~gvva--~~t~~PVIgvP~~ 81 (138)
++.+.+++++. +++ |||+....+. .+--++. ......|.-+|-.
T Consensus 54 ~~~l~~~~~~~---~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~ 101 (141)
T 3nkl_A 54 PKYLERLIKKH---CISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNL 101 (141)
T ss_dssp GGGHHHHHHHH---TCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEECCCH
T ss_pred HHHHHHHHHHC---CCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEECCCH
Confidence 45666666533 344 5555433332 1222332 3456677777754
No 307
>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5
Probab=36.11 E-value=49 Score=23.57 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQ 33 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR 33 (138)
+.++++.-.|++.|++|+........
T Consensus 12 p~~~~v~~~L~~~gi~~~~~~v~~~~ 37 (218)
T 1r5a_A 12 PPCRSVLLLAKMIGVELDLKVLNIME 37 (218)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred hhHHHHHHHHHHcCCCCeEEecCccc
Confidence 67899999999999999988776533
No 308
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=36.07 E-value=41 Score=23.73 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
.+++.+.|++.||+|+..-....++-+++.+++.-...+-+|-++.
T Consensus 4 ~~~v~~~L~~~~i~~~~~~~~~~~t~~~~a~~lg~~~~~~~Ktlv~ 49 (152)
T 3op6_A 4 VKKLKQFLDSHKIKYLSIAHSPAYTAQEIAASAHVSGKQLAKTVII 49 (152)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTCCHHHHC----CCSSCCEEEEEE
T ss_pred HHHHHHHHHHcCCceEEEEcCCCCCHHHHHHHcCCChhheEEEEEE
Confidence 4689999999999998754444455555555443222233454443
No 309
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=36.02 E-value=64 Score=25.15 Aligned_cols=41 Identities=12% Similarity=0.237 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKI 52 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~v 52 (138)
++.++++.+.++.+|.+.++-.+| -|++.++.+... -|+++
T Consensus 144 ~~~v~~i~~~~~~~~~~T~IlaAS-~Rn~~~v~~aa~----~G~d~ 184 (223)
T 3s1x_A 144 MQIIDMIRTIFNNYIIKTQILVAS-IRNPIHVLRSAV----IGADV 184 (223)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEBS-CCSHHHHHHHHH----HTCSE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEe-CCCHHHHHHHHH----cCCCE
Confidence 678999999999999998887776 488888877442 35555
No 310
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=36.01 E-value=90 Score=25.21 Aligned_cols=68 Identities=13% Similarity=0.023 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCC---------C-chHHHHHHHHhhhcCCeEEEEecCcCCc---hhH----Hhh
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQ---------N-CKEALSYALSAKERGIKIIIVGDGVEAH---LSG----VAA 68 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR---------~-p~~~~~~~~~~~~~~~~viIa~AG~~a~---L~g----vva 68 (138)
|....+++.+.|+++|....+ +.|- + -+|..++-+-+.+..+++|+++-|+.+. ||- .+.
T Consensus 29 ~~~~~~~~~~~L~~~G~~v~~---~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~rlL~~lD~~~i~ 105 (336)
T 3sr3_A 29 SPKRFERAKSYLLQKGFHILE---GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQ 105 (336)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE---CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCSCGGGGGGGSCHHHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEE---cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccccccHHHHhhhcChhHHh
Confidence 456788999999999986543 2221 1 2466666666677789999999998654 222 222
Q ss_pred hccCCcEEE
Q 032570 69 ANSQILVIR 77 (138)
Q Consensus 69 ~~t~~PVIg 77 (138)
..+++.+|
T Consensus 106 -~~PK~~~G 113 (336)
T 3sr3_A 106 -NNPKIMIG 113 (336)
T ss_dssp -HSCCEEEE
T ss_pred -hCCeEEEE
Confidence 24667776
No 311
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=36.01 E-value=74 Score=25.01 Aligned_cols=96 Identities=7% Similarity=-0.001 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe---EE---------------EEEccC---CCchHHHHHHHHhhhcCCeEEEEecCcCCch
Q 032570 5 LDLPVMNDAARTLSDFGVPY---EI---------------KILPPH---QNCKEALSYALSAKERGIKIIIVGDGVEAHL 63 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~---~~---------------~V~SaH---R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L 63 (138)
+|....+-....++.+++.| |+ -|.|.| ++|.++.++.+++.+-|++++ =+|.++...
T Consensus 107 ~~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~~~~kiI~S~Hdf~~tp~el~~~~~~~~~~GaDIv-Kia~~a~s~ 185 (259)
T 3l9c_A 107 SNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEETPENLMEVFSELTALAPRVV-KIAVMPKNE 185 (259)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGTTCSSEEEEEEESSCCCTTHHHHHHHHHHTCCSEE-EEEECCSSH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHHhcCeEEEEeccCCCCHHHHHHHHHHHHHcCCCEE-EEEecCCCH
Confidence 45555555555555567653 22 488888 799988888888877776643 234444433
Q ss_pred hHHh------hh----ccCCcEEEecCCCCCCCchh-hhhhhcCCCCCeeeEEe
Q 032570 64 SGVA------AA----NSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVP 106 (138)
Q Consensus 64 ~gvv------a~----~t~~PVIgvP~~~~~~~G~d-LlS~lqmP~GvpvatV~ 106 (138)
.=++ .- +...|+|++.+.. ++-+. +++-+- |.|++--.
T Consensus 186 ~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~--~G~~SRi~~~~~---GS~lTf~~ 234 (259)
T 3l9c_A 186 QDVLDLMNYTRGFKTLNPNQEYVTMSMSK--LGRISRLAADLI---GSSWTFAS 234 (259)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEECTG--GGHHHHHTHHHH---TBSEEECB
T ss_pred HHHHHHHHHHHHHHhccCCCCEEEEECCC--CcccHHHHHHHh---CCcccccc
Confidence 3221 11 2468999987743 44344 444332 44454333
No 312
>2bcq_A DNA polymerase lambda; misalignment, extrahelical, mutagenesis, mutation, deletion, streisinger, slippage, transferase, lyase/DNA complex; HET: DNA; 1.65A {Homo sapiens} SCOP: a.60.6.1 a.60.12.1 d.218.1.2 PDB: 1xsl_A* 2bcr_A* 2bcs_A* 2bcu_A* 2bcv_A* 2gws_A* 3c5g_A* 3c5f_A* 2pfn_A* 1xsp_A* 1xsn_A* 2pfo_A* 2pfp_A* 2pfq_A* 3hw8_A* 3hwt_A* 1rzt_A* 3hx0_A* 3mdc_A* 3mda_A* ...
Probab=35.69 E-value=39 Score=27.51 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc---CCchhHHhhhccCCcEEEecCCCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV---EAHLSGVAAANSQILVIRVPLLSED 84 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~---~a~L~gvva~~t~~PVIgvP~~~~~ 84 (138)
++++.+.+.|+.+.-.+.+.+++-.|--+++ ..+++++|+.... .+.|.-++..++..|.|---.....
T Consensus 154 ~ia~~i~~~l~~~~~~~~v~i~GS~RRgket--------~gDiDilit~~~~~~~~~ll~~v~~~l~~~~~i~~~l~~~~ 225 (335)
T 2bcq_A 154 EIEQTVQKAAQAFNSGLLCVACGSYRRGKAT--------CGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQE 225 (335)
T ss_dssp HHHHHHHHHHHTTCTTCEEEECHHHHTTCSE--------ESSEEEEEECTTSSTTTTCHHHHHHHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHhcCCCcEEEEccccccCCCC--------CCCeEEEEecCCchhhhhHHHHHHHHHHhCCchHHHhhccc
Confidence 4566666777766555677787765432222 2467888885543 3567788889998888864433323
Q ss_pred CCc-hh-hhhhhcCC----CCCeeeEEecC-CchhHHHH
Q 032570 85 WSE-DD-VINSIRMP----SHVQVASVPRN-NAKNAALY 116 (138)
Q Consensus 85 ~~G-~d-LlS~lqmP----~GvpvatV~I~-~~~nAA~~ 116 (138)
.+| .+ .+|..+.| .+..|=...+. .-+++|++
T Consensus 226 ~~g~~~k~~~v~~l~~~~~~~~rVDl~~vp~~~~g~ALl 264 (335)
T 2bcq_A 226 ENGQQQKYLGVCRLPGPGRRHRRLDIIVVPYSEFACALL 264 (335)
T ss_dssp TSTTCCEEEEEECCSSTTCCCEEEEEEECCGGGHHHHHH
T ss_pred cCCCCceEEEEEEccCCCCCceEEEEEEECHHHHHHHHH
Confidence 334 44 55776777 67666555544 55555543
No 313
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=35.49 E-value=75 Score=26.11 Aligned_cols=60 Identities=7% Similarity=0.040 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHhC--CCeEEEEEccCCC-chHHHHHHHHhhhcCCeEEEEecCcCCchhHHh
Q 032570 7 LPVMNDAARTLSDFG--VPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 7 ~~~~~~~~~~L~~~g--i~~~~~V~SaHR~-p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv 67 (138)
++.++++.+.+++.| +...+....+.|+ |+.+.++++.+.+- ++.|-...=.-...|.-+
T Consensus 113 l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~ 175 (382)
T 2ztj_A 113 IEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQV 175 (382)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHH
Confidence 577888888899999 7766666678885 67888888888766 775544433333445443
No 314
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=35.46 E-value=1e+02 Score=23.73 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 60 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~ 60 (138)
|--.+.+++.+.+++- .+|+.+.-.....+++.+.++.+.++|..|+|.+.|..
T Consensus 7 ~~e~Ii~r~~e~I~~A--~~el~lsi~~e~l~~l~~~L~~A~~rGV~V~liv~~~~ 60 (233)
T 2f5t_X 7 SFDEAIEMFRESLYSA--KNEVIVVTPSEFFETIREDLIKTLERGVTVSLYIDKIP 60 (233)
T ss_dssp CHHHHHHHHHHHHHTC--SSEEEEEECGGGHHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHHh--hhEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 3446677888887765 45777777777778888888888899999999999864
No 315
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=35.46 E-value=95 Score=28.39 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEcc------------------CCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPP------------------HQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~Sa------------------HR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
.|...+++..+.+++.|||+|+-+... .|-|+ ..+++++.+++|.++++-+
T Consensus 274 ~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~~G~k~vl~i 342 (817)
T 4ba0_A 274 RSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMMADFKQQGVKTVLIT 342 (817)
T ss_dssp CSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEcccccCCccccccCccccccccCCC-HHHHHHHHHHCCCEEEEEe
Confidence 366677788888899999999988864 24555 4788888888999977654
No 316
>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A
Probab=35.42 E-value=50 Score=24.53 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
+.++++.-.|++.|++|+.......+...+-.+|.
T Consensus 29 p~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~ 63 (260)
T 1k0d_A 29 PNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFV 63 (260)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHH
T ss_pred ccHHHHHHHHHHCCCCceEEEecCccccccCHHHH
Confidence 77899999999999999988776543333333444
No 317
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=34.94 E-value=48 Score=23.77 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNC 35 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p 35 (138)
-+.++++.-.|++.|++|+......++.|
T Consensus 11 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~ 39 (229)
T 3lxz_A 11 SNYYNMVKLALLEKGLTFEEVTFYGGQAP 39 (229)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCCSCH
T ss_pred CchHHHHHHHHHHcCCCCEEEecCCCCCH
Confidence 36789999999999999998776555443
No 318
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=34.82 E-value=17 Score=28.97 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=30.2
Q ss_pred CCCchHHHHHHH----HhhhcCCeEEEEecCcCC--chhHHhhhccCCcEEEec
Q 032570 32 HQNCKEALSYAL----SAKERGIKIIIVGDGVEA--HLSGVAAANSQILVIRVP 79 (138)
Q Consensus 32 HR~p~~~~~~~~----~~~~~~~~viIa~AG~~a--~L~gvva~~t~~PVIgvP 79 (138)
-|+.+++.++.. ..++.|++.||.+-..+. +|.- +-.....||||+-
T Consensus 65 ~ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~-lr~~~~iPvigii 117 (274)
T 3uhf_A 65 VKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDA-LRAKAHFPVYGVI 117 (274)
T ss_dssp TSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHH-HHHHCSSCEECSH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHH-HHHhcCCCEEcCC
Confidence 488888887764 445678886554433332 2444 4556789999974
No 319
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=34.47 E-value=80 Score=21.53 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=18.1
Q ss_pred HHHHHHH-HHHHHHhC---CCeEEEEEc
Q 032570 7 LPVMNDA-ARTLSDFG---VPYEIKILP 30 (138)
Q Consensus 7 ~~~~~~~-~~~L~~~g---i~~~~~V~S 30 (138)
=|.|+++ +..|+++| ++|+..=..
T Consensus 47 Cp~C~~a~k~~L~~~~~~~i~~~~vdvd 74 (129)
T 3ctg_A 47 CPYCKATLSTLFQELNVPKSKALVLELD 74 (129)
T ss_dssp CHHHHHHHHHHHTTSCCCGGGEEEEEGG
T ss_pred CCchHHHHHHHHHhcCccCCCcEEEEcc
Confidence 4788899 99999999 877654443
No 320
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=34.37 E-value=52 Score=23.40 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++|+......
T Consensus 18 ~~~~~v~~~L~~~gi~~e~~~v~~ 41 (215)
T 3lyp_A 18 HYSHRVRIVLAEKGVSAEIISVEA 41 (215)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECC-
T ss_pred chHHHHHHHHHHCCCCcEEEecCc
Confidence 688999999999999999876654
No 321
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=34.35 E-value=64 Score=23.78 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
--|.++++.-.|++.|++|+......
T Consensus 23 ~sp~~~rv~~~L~~~gi~ye~~~v~~ 48 (241)
T 1k0m_A 23 NCPFSQRLFMVLWLKGVTFNVTTVDT 48 (241)
T ss_dssp SCHHHHHHHHHHHHHTCCCEEEEECT
T ss_pred CCHHHHHHHHHHHHcCCccEEEEcCC
Confidence 34899999999999999999877765
No 322
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=34.32 E-value=86 Score=19.62 Aligned_cols=22 Identities=18% Similarity=0.236 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHHHHhCCC---eEEE
Q 032570 6 DLPVMNDAARTLSDFGVP---YEIK 27 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~---~~~~ 27 (138)
.=++|+++...|++++++ |+..
T Consensus 21 ~C~~C~~~~~~L~~~~~~~~~~~~v 45 (105)
T 1kte_A 21 TCPFCRKTQELLSQLPFKEGLLEFV 45 (105)
T ss_dssp SCHHHHHHHHHHHHSCBCTTSEEEE
T ss_pred CCHhHHHHHHHHHHcCCCCCccEEE
Confidence 337899999999999998 6544
No 323
>1vki_A Hypothetical protein ATU3699; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.60A {Agrobacterium tumefaciens str} SCOP: d.116.1.1
Probab=34.30 E-value=39 Score=24.77 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
..+++.+.|++.||+|+..-...-++-+++.+++.....+-+|-++.-
T Consensus 20 ~~~~~~~~L~~~~i~~~~~~~p~~~T~ee~a~~l~~~~~~~~KtLvl~ 67 (181)
T 1vki_A 20 TATELFEFLDGLGISHTTKQHEPVFTVAESQSLRDLIPGGHTKNLFVK 67 (181)
T ss_dssp CHHHHHHHHHHHTCCCEEEECCCCCSHHHHHHHHTTSCSEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEECCCCCCHHHHHHHcCCCccceeEEEEEE
Confidence 456789999999999998755455566666666533233334544443
No 324
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=34.10 E-value=17 Score=28.29 Aligned_cols=72 Identities=18% Similarity=0.088 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC-----CCchHHHHHH----HHhhhcCCeEEEE-ecCcCCchhHHhhhccCCcE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALSYA----LSAKERGIKIIIV-GDGVEAHLSGVAAANSQILV 75 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaH-----R~p~~~~~~~----~~~~~~~~~viIa-~AG~~a~L~gvva~~t~~PV 75 (138)
.+.+.+++.+.+-.-. +-+---++| |+.+.+.+++ +..++.|++.|+. +-..+...---+......||
T Consensus 24 gltv~~~i~~~~P~~~--~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPv 101 (273)
T 2oho_A 24 GLTVVCELIRQLPHEK--IVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAALDIPV 101 (273)
T ss_dssp THHHHHHHHHHCTTCC--EEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHCCCCC--EEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhHHHHHHHHHhCCCCE
Confidence 3777888777654322 111112222 5666666554 4445668885443 33333221234556678999
Q ss_pred EEec
Q 032570 76 IRVP 79 (138)
Q Consensus 76 IgvP 79 (138)
|++.
T Consensus 102 igi~ 105 (273)
T 2oho_A 102 LGVV 105 (273)
T ss_dssp EESH
T ss_pred Eecc
Confidence 9953
No 325
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=34.02 E-value=60 Score=23.11 Aligned_cols=25 Identities=20% Similarity=0.099 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
-+.++++.-.|++.|++|+......
T Consensus 15 sp~~~~v~~~L~~~gi~~e~~~v~~ 39 (216)
T 3lyk_A 15 DIYCHQVKIVLAEKGVLYENAEVDL 39 (216)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred ChhHHHHHHHHHHcCCCcEEEeCCc
Confidence 3789999999999999999877654
No 326
>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5
Probab=33.98 E-value=59 Score=23.49 Aligned_cols=25 Identities=12% Similarity=0.188 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
-+.++++.-.|++.|++|+......
T Consensus 15 sp~~~~v~~~L~~~gi~~e~~~v~~ 39 (231)
T 1oyj_A 15 SPFGQRCRIAMAEKGLEFEYREEDL 39 (231)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCT
T ss_pred ChHHHHHHHHHHHCCCCCeEEecCc
Confidence 3788999999999999999877765
No 327
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=33.50 E-value=1.1e+02 Score=22.83 Aligned_cols=57 Identities=7% Similarity=0.012 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcC----CchhHHhhhc
Q 032570 12 DAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE----AHLSGVAAAN 70 (138)
Q Consensus 12 ~~~~~L~~~gi~---~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~----a~L~gvva~~ 70 (138)
-..+.|+++|+. ....++ --.++.+.+-++++.+ .++++||+-.|.+ ...+-+++..
T Consensus 27 ~L~~~L~~~G~~~~v~~~~iV--~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~T~ea~~~~ 91 (195)
T 1di6_A 27 ALEEWLTSALTTPFELETRLI--PDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAV 91 (195)
T ss_dssp HHHHHHHHHBCSCEEEEEEEE--ESCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCceEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccHHHHHHHH
Confidence 356788899986 233333 2344555555555544 3689999988875 3455555543
No 328
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=33.47 E-value=36 Score=27.14 Aligned_cols=63 Identities=13% Similarity=0.169 Sum_probs=48.4
Q ss_pred HHHhCCCeEEEEE--c--cCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecC
Q 032570 17 LSDFGVPYEIKIL--P--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 17 L~~~gi~~~~~V~--S--aHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~ 80 (138)
+++||+.. +.+. + .=-+|.++.++++..+++++++|+.=...+.-+.-.+|..+..||+-+.+
T Consensus 204 a~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 204 AKEYGLKQ-VPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp HHHTTCEE-EECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHCCCeE-EEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 35677762 3332 2 22467899999999999999999999999999999999999999876543
No 329
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=33.34 E-value=80 Score=23.12 Aligned_cols=49 Identities=10% Similarity=0.097 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
+.+..++..+.++++|.|..+..-.+ ++++.++++++.....++++-..
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~---~~~~~~~l~~~p~~~~~~i~H~~ 155 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREA---TQDCIDILLEEHAEEVGGIMHSF 155 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC---HHHHHHHHHHTTGGGTCEEETTC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeccc---HHHHHHHHHhcCCCCCcEEEEcC
Confidence 45677888889999999999987654 46777887766422356655433
No 330
>1vjf_A DNA-binding protein, putative; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.62A {Caulobacter crescentus CB15} SCOP: d.116.1.1
Probab=33.11 E-value=64 Score=23.53 Aligned_cols=48 Identities=19% Similarity=0.155 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
.+.+.+.|++.||+|+..-...-++-++..++..-...+-+|-++.-+
T Consensus 16 ~~~v~~~L~~~~i~~~~~~~p~~~T~ee~a~~l~~~~~~~~KtLvl~~ 63 (180)
T 1vjf_A 16 RADLFAFFDAHGVDHKTLDHPPVFRVEEGLEIKAAMPGGHTKNLFLKD 63 (180)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCSHHHHHHHHHHSCSEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHcCCCccceeeEEEEEe
Confidence 578899999999999985544556677777776544444456555443
No 331
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=33.00 E-value=70 Score=22.69 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++|+......
T Consensus 20 ~~~~~v~~~L~~~gi~~e~~~v~~ 43 (213)
T 1yy7_A 20 IFSHQVRIVLAEKGVSVEIEQVEA 43 (213)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCT
T ss_pred hhHHHHHHHHHHcCCCCeEEeCCc
Confidence 789999999999999999877664
No 332
>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*
Probab=32.98 E-value=54 Score=24.02 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQ 33 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR 33 (138)
-+.++++.-.|++.|++|+.......+
T Consensus 11 sp~~~~v~~~L~~~gi~ye~~~v~~~~ 37 (244)
T 1ljr_A 11 SQPSRAVYIFAKKNGIPLELRTVDLVK 37 (244)
T ss_dssp SHHHHHHHHHHHHTTCCCEEEECCTTT
T ss_pred CcchHHHHHHHHHcCCCCeEEEecccc
Confidence 367889999999999999988777643
No 333
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=32.94 E-value=1.2e+02 Score=21.07 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHh
Q 032570 8 PVMNDAARTLSDF 20 (138)
Q Consensus 8 ~~~~~~~~~L~~~ 20 (138)
+..++..+.++++
T Consensus 110 ~~~~~~~~~~~~~ 122 (182)
T 3can_A 110 KNIKLSAEFLASL 122 (182)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 3444444444444
No 334
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=32.82 E-value=1.7e+02 Score=22.59 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHH-HhCCCeEEEEEccCCCchHHHHHHHHhhhcC-CeEEEEec
Q 032570 6 DLPVMNDAARTLS-DFGVPYEIKILPPHQNCKEALSYALSAKERG-IKIIIVGD 57 (138)
Q Consensus 6 D~~~~~~~~~~L~-~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~-~~viIa~A 57 (138)
|.+...+..+.++ ..++|.-+++. ..-+.+.+.++++.+++.| ++.|++..
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~-~~~~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMP-PYFDIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEEC-CCCCHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEC-CCCCHHHHHHHHHHHHhcCCceEEEEeC
Confidence 4444455555444 35888888875 3346678888888888888 88777543
No 335
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=32.64 E-value=35 Score=24.18 Aligned_cols=39 Identities=8% Similarity=0.031 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEc-cCCCchHHHHHHHH
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALS 44 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~S-aHR~p~~~~~~~~~ 44 (138)
.=+.|+++.+.|++-|++|+.+=.. -.-+.+++.++.+.
T Consensus 11 ~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~ 50 (141)
T 1s3c_A 11 ASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIAD 50 (141)
T ss_dssp TCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhcc
Confidence 3478999999999999998765443 23455666666654
No 336
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=32.32 E-value=1.4e+02 Score=21.53 Aligned_cols=48 Identities=17% Similarity=0.238 Sum_probs=33.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEE
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 53 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~vi 53 (138)
+||-++.+++....+.-|+..-+ .-....-++-.+-+++++++|.+|=
T Consensus 9 ssdpeilkeivreikrqgvrvvl--lysdqdekrrrerleefekqgvdvr 56 (162)
T 2l82_A 9 SSDPEILKEIVREIKRQGVRVVL--LYSDQDEKRRRERLEEFEKQGVDVR 56 (162)
T ss_dssp ESCHHHHHHHHHHHHHTTCEEEE--EECCSCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCHHHHHHHHHHHHhCCeEEEE--EecCchHHHHHHHHHHHHHcCCcee
Confidence 58999999999999999985432 2233444555556666777777764
No 337
>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp}
Probab=32.28 E-value=48 Score=23.67 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQ 33 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR 33 (138)
-+.++++.-.|++.|++|+........
T Consensus 11 s~~~~~v~~~L~~~gi~ye~~~v~~~~ 37 (222)
T 3niv_A 11 STACYRVRIALNLKKIAYEKIEVHLVN 37 (222)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEECCC--
T ss_pred CcHHHHHHHHHHHcCCCcEEEEecccc
Confidence 367899999999999999987766543
No 338
>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5
Probab=32.22 E-value=37 Score=24.00 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++||......
T Consensus 12 p~~~~v~~~L~~~gi~ye~~~v~~ 35 (216)
T 1aw9_A 12 PNVVRVATVLNEKGLDFEIVPVDL 35 (216)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCS
T ss_pred ccHHHHHHHHHHcCCccEEEecCc
Confidence 688999999999999999877664
No 339
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=31.95 E-value=1e+02 Score=25.10 Aligned_cols=51 Identities=18% Similarity=0.299 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHHhCCC---------------e---E-EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 5 LDLPVMNDAARTLSDFGVP---------------Y---E-IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~---------------~---~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
-|+.-+.+-...|+++|+. | + ..|-+-.-+.+.++++++.+.++|.+||+=
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 89 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLD 89 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3666666666788999995 1 2 256666678899999999999999999864
No 340
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=31.92 E-value=1e+02 Score=19.67 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=32.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh-----h--cCCeEEEEecCc
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-----E--RGIKIIIVGDGV 59 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~-----~--~~~~viIa~AG~ 59 (138)
+.|....+.....|++.|..+++..++ +.++..+++++.. . ..++++|.=..+
T Consensus 13 dd~~~~~~~l~~~L~~~g~~~~v~~~~---~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l 72 (149)
T 1k66_A 13 EDSDEDFSTFQRLLQREGVVNPIYRCI---TGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL 72 (149)
T ss_dssp CCCHHHHHHHHHHHHHTTBCSCEEEEC---SHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC
T ss_pred ECCHHHHHHHHHHHHHcCCCceEEEEC---CHHHHHHHHHhcccccCcccCCCCcEEEEECCC
Confidence 356777888899999988765655442 3455555544211 1 457888875544
No 341
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=31.91 E-value=46 Score=24.61 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
.-|.++++.-.|++.|++|+......
T Consensus 29 ~sp~~~rv~~~L~~~gi~ye~~~v~~ 54 (247)
T 2r4v_A 29 NCPFCQRLFMILWLKGVKFNVTTVDM 54 (247)
T ss_dssp SCHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred CChhHHHHHHHHHHcCCCcEEEEcCc
Confidence 35889999999999999999877764
No 342
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=31.91 E-value=66 Score=23.67 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=20.5
Q ss_pred HHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 42 ALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 42 ~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
++..++.|+++|+..--.+..+. -+...+..|||++
T Consensus 68 ~~~l~~~g~d~iviaCnta~~~~-~l~~~~~iPvi~i 103 (228)
T 2eq5_A 68 AKEFEREGVDAIIISCAADPAVE-KVRKLLSIPVIGA 103 (228)
T ss_dssp HHHHHHTTCSEEEECSTTCTTHH-HHHHHCSSCEEEH
T ss_pred HHHHHHCCCCEEEEeCCchHHHH-HHHHhCCCCEeCc
Confidence 34455678885554443333332 3445678999984
No 343
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=31.90 E-value=1e+02 Score=25.17 Aligned_cols=52 Identities=21% Similarity=0.284 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHhCCC---------------e---E-EEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 5 LDLPVMNDAARTLSDFGVP---------------Y---E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~---------------~---~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
-|+.-+.+-...|+++|+. | + ..|-+..-+.++++++++.+.++|.+||+=+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3566565556889999995 1 2 3555666689999999999999999998743
No 344
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=31.90 E-value=1.9e+02 Score=26.87 Aligned_cols=113 Identities=11% Similarity=0.123 Sum_probs=62.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCC----chH------HHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc-c--CCcEE
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQN----CKE------ALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN-S--QILVI 76 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~----p~~------~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~-t--~~PVI 76 (138)
+-+|++.|++-|| .+||.|.|-. |.. ..+..+..-..+-.++++..|....+..+++.. . .+=|+
T Consensus 675 AL~AA~~L~~~GI--~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~gGlgsaV~ell~~r~~~~~l~v~ 752 (845)
T 3ahc_A 675 LMAASDALNKMGI--KFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYHSYAQDVRGLIYDRPNHDNFHVV 752 (845)
T ss_dssp HHHHHHHHHHTTC--CEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEESSCHHHHHHHTTTSTTGGGEEEE
T ss_pred HHHHHHHHHhCCC--CEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeecCcHHHHHHHHHhCCCCceEEEE
Confidence 6789999998888 5788888743 221 001111111123358888888888888888766 2 23388
Q ss_pred EecCCCCCCCchhhhhhhcCCCCCeeeEEecCCchhHHHHHHHHHc-cCCHHHHHHHHHHH
Q 032570 77 RVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG-IADEDLLERIRKYV 136 (138)
Q Consensus 77 gvP~~~~~~~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~-~~~~~l~~kl~~~~ 136 (138)
|+|-.+....-.||+-.-.+ +.++-+..|.+.+. .....+++++++.+
T Consensus 753 G~~d~G~tgtp~eLl~~~gl------------d~~~Iv~~a~~~l~~~~~~~~~~~~~~~~ 801 (845)
T 3ahc_A 753 GYKEQGSTTTPFDMVRVNDM------------DRYALQAAALKLIDADKYADKIDELNAFR 801 (845)
T ss_dssp CCCSCCCSCCHHHHHHTTTC------------SHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred eccCCCCCCCHHHHHHHhCc------------CHHHHHHHHHHHcchhhHHHHHHHHHHHH
Confidence 88875432222335433221 33444444444443 33345666655543
No 345
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=31.77 E-value=1.1e+02 Score=23.05 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
+.+..++..+.++++|+|..++.- +.++.+.++++++.....++|+
T Consensus 118 q~~~f~~~~~~a~~~~lPv~iH~~---~~~~~~~~il~~~p~~~~~~I~ 163 (268)
T 1j6o_A 118 QKRVFVEQIELAGKLNLPLVVHIR---DAYSEAYEILRTESLPEKRGVI 163 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE---SCHHHHHHHHHHSCCCSSCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeC---chHHHHHHHHHhcCCCCCCEEE
Confidence 456778888888999999988875 4567788888765322345665
No 346
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=31.74 E-value=1.1e+02 Score=22.55 Aligned_cols=51 Identities=12% Similarity=0.041 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhCCCeEEE----EEccCCCc-hHHHHHHHHhhhcCCeEEEEecCc
Q 032570 9 VMNDAARTLSDFGVPYEIK----ILPPHQNC-KEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~----V~SaHR~p-~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
..++.++.|++.|+++-.. ..+..... +.+.+.++.++.-|++.+++..|.
T Consensus 52 ~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~g~ 107 (264)
T 1yx1_A 52 DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSLGL 107 (264)
T ss_dssp CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEEEC
T ss_pred HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4677888889999864322 22212233 667777777777788887777664
No 347
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=31.72 E-value=19 Score=28.21 Aligned_cols=70 Identities=23% Similarity=0.225 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc-----CCCchHHHHHH----HHhhhcCCeEEEEecCc-CC-chhHHhhhccCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKEALSYA----LSAKERGIKIIIVGDGV-EA-HLSGVAAANSQIL 74 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~Sa-----HR~p~~~~~~~----~~~~~~~~~viIa~AG~-~a-~L~gvva~~t~~P 74 (138)
.+.+.+++.+.+-.-.+-| ---++ -|+.+.+.++. +..++.|++.|+..-.. ++ +|.-+ ......|
T Consensus 19 Gltv~~~i~~~lP~~~~iy--~~D~~~~PyG~~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas~~~l~~l-r~~~~iP 95 (276)
T 2dwu_A 19 GLTVASEIIRQLPKESICY--IGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAAATLAAL-QEALSIP 95 (276)
T ss_dssp THHHHHHHHHHCTTSCEEE--EECGGGCCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHHHHHHHHH-HHHCSSC
T ss_pred hHHHHHHHHHhCCCCcEEE--ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHH-HHHCCCC
Confidence 3566667666553322111 11122 25566555544 44556788855543333 22 34433 3456899
Q ss_pred EEEe
Q 032570 75 VIRV 78 (138)
Q Consensus 75 VIgv 78 (138)
|||+
T Consensus 96 Vigi 99 (276)
T 2dwu_A 96 VIGV 99 (276)
T ss_dssp EEES
T ss_pred EEec
Confidence 9995
No 348
>3lvu_A ABC transporter, periplasmic substrate-binding PR; MCSG, PSI-2, periplasmic substrate-binding silicibacter pomeroyi, structural genomics; HET: MSE PG5; 1.79A {Silicibacter pomeroyi}
Probab=31.56 E-value=97 Score=22.83 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
....++-+++.|+++||..+++.... ..+.+...+..+++++...+
T Consensus 141 ~~~~a~~iq~~l~~iGi~v~i~~~~~-------~~~~~~~~~~~~d~~~~~w~ 186 (258)
T 3lvu_A 141 MQTVLEIYTRALERLGIAAQIEKVDN-------AQYTARVAELDFDLTPFRRD 186 (258)
T ss_dssp HHHHHHHHHHHHHTTTCCCEEEEECH-------HHHHHHHHTTCCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCeeEEEecCH-------HHHHHHhccCCccEEEecCC
Confidence 34677888889999999999987642 23444444556777765443
No 349
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=31.53 E-value=1e+02 Score=24.57 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=42.2
Q ss_pred cCCHHHHHHHHHHHH-HhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch
Q 032570 4 DLDLPVMNDAARTLS-DFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 63 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~-~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L 63 (138)
+.|..+++.-.+.+. +++.++++.+.| .++.+.+|.+ +..++++++-......+
T Consensus 28 d~d~~Y~~~l~~y~~~~~~~~~~v~~ft---~~e~~~~~~~---~~~~dilli~e~~~~~~ 82 (373)
T 3fkq_A 28 DKDKEYLDRLTGVFNTKYADKLEVYSFT---DEKNAIESVK---EYRIDVLIAEEDFNIDK 82 (373)
T ss_dssp CSCHHHHHHHHHHHHHHTTTTEEEEEES---CHHHHHHHHH---HHTCSEEEEETTCCCCG
T ss_pred eCCHHHHHHHHHHHhhccCCceEEEEEC---CHHHHHHHHh---cCCCCEEEEcchhhhhh
Confidence 578999999999997 799999999875 4577777764 34689999887775554
No 350
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=31.50 E-value=1.5e+02 Score=21.93 Aligned_cols=54 Identities=11% Similarity=-0.103 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCC----------------Cc-------hHHHHHHHHhhhcCCeEEEEecCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQ----------------NC-------KEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR----------------~p-------~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
|....++.++.|++.|+.+...-.+.+- .| +.+.+.++.+..-|++.++...|.
T Consensus 49 ~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~ 125 (290)
T 3tva_A 49 TREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGF 125 (290)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 3556888899999999975443222110 11 344555566666688888887764
No 351
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein ST initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.48.1
Probab=31.48 E-value=41 Score=22.74 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=30.9
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEc--cCC-CchHHHHHHHHh
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSA 45 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~S--aHR-~p~~~~~~~~~~ 45 (138)
+.|=.+++.++.+.+++-|++|+++=.+ .-- ..+++.+.++++
T Consensus 15 ~~svs~~Va~~i~~i~~sgl~y~~~pm~T~iEG~e~devm~vv~~~ 60 (99)
T 1lxn_A 15 STSLSSYVAAAVEALKKLNVRYEISGMGTLLEAEDLDELMEAVKAA 60 (99)
T ss_dssp SSCCHHHHHHHHHHHTTSSCEEEEETTEEEEEESSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHcCCCeEeCCCeeEEECCCHHHHHHHHHHH
Confidence 5677899999999999999998763211 122 357777777655
No 352
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=31.38 E-value=98 Score=19.41 Aligned_cols=54 Identities=15% Similarity=0.185 Sum_probs=33.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh----hcCCeEEEEecCcC
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK----ERGIKIIIVGDGVE 60 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~----~~~~~viIa~AG~~ 60 (138)
+.|....+.....|+..|..+++..++ +.++..+++++.. ...++++|.-..+.
T Consensus 9 dd~~~~~~~l~~~L~~~~~~~~v~~~~---~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~ 66 (140)
T 1k68_A 9 EDNKADIRLIQEALANSTVPHEVVTVR---DGMEAMAYLRQEGEYANASRPDLILLXLNLP 66 (140)
T ss_dssp CCCHHHHHHHHHHHHTCSSCCEEEEEC---SHHHHHHHHTTCGGGGSCCCCSEEEECSSCS
T ss_pred eCCHHHHHHHHHHHHhcCCCceEEEEC---CHHHHHHHHHcccccccCCCCcEEEEecCCC
Confidence 357778888899999988766655542 3455555443211 14688888765543
No 353
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=31.26 E-value=28 Score=27.40 Aligned_cols=69 Identities=22% Similarity=0.210 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEc-----cCCCchHHHHHH----HHhhhcCCeEEEEecC-cCC-chhHHhhhccCCcE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILP-----PHQNCKEALSYA----LSAKERGIKIIIVGDG-VEA-HLSGVAAANSQILV 75 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~S-----aHR~p~~~~~~~----~~~~~~~~~viIa~AG-~~a-~L~gvva~~t~~PV 75 (138)
+.+.+++.+.|-...+ -+---+ -.|+++++.++. +..++.|++.|+..-. .+. +|. .+......||
T Consensus 18 ltv~~~i~~~lP~~~~--iy~~D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~~~al~-~lr~~~~iPv 94 (269)
T 3ist_A 18 LTVVREVLKQLPHEQV--YYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALY-DIREKLDIPV 94 (269)
T ss_dssp HHHHHHHHHHCTTCCE--EEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHHH-HHHHHCSSCE
T ss_pred HHHHHHHHHHCCCCcE--EEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHH-HHHHhcCCCE
Confidence 4566666665532222 111112 237787777765 4445678885554433 333 244 4556678999
Q ss_pred EEe
Q 032570 76 IRV 78 (138)
Q Consensus 76 Igv 78 (138)
||+
T Consensus 95 igi 97 (269)
T 3ist_A 95 IGV 97 (269)
T ss_dssp EES
T ss_pred Eee
Confidence 996
No 354
>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}
Probab=31.24 E-value=53 Score=23.14 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc-CCCc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP-HQNC 35 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p 35 (138)
+.++++.-.|++.|++|+...... |+.|
T Consensus 12 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~ 40 (214)
T 3cbu_A 12 NYYNKVKLALLEKNVPFEEVLAWIGETDT 40 (214)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTSSCT
T ss_pred cHhHHHHHHHHhCCCCCEEEecCcccCCc
Confidence 678999999999999999877763 4444
No 355
>4ecj_A Glutathione S-transferase; transferase-like protein, transcription regulation; HET: GSH; 1.76A {Pseudomonas aeruginosa} PDB: 4eci_A*
Probab=31.18 E-value=56 Score=24.05 Aligned_cols=36 Identities=19% Similarity=0.413 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
-+.++++.-.|++.|++|+......-....+..+|.
T Consensus 11 sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~ 46 (244)
T 4ecj_A 11 TPNGHKVSIALEEMGLPYRVHALSFDKKEQKAPEFL 46 (244)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHH
T ss_pred CcCHHHHHHHHHHcCCCceEEEecCCCCCcCCHHHH
Confidence 478999999999999999988876544333333443
No 356
>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}
Probab=31.17 E-value=46 Score=23.15 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc-CCCc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP-HQNC 35 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p 35 (138)
-+.++++.-.|++.|++||...... |+.+
T Consensus 9 sp~~~~v~~~l~~~gi~~e~~~v~~~~~~~ 38 (202)
T 3r2q_A 9 SPFVRKLSILLLEKGITFEFINELPYNADN 38 (202)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCTTSSSC
T ss_pred CcHHHHHHHHHHHcCCCCeEEEecCCCCcH
Confidence 3689999999999999999876654 4443
No 357
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=31.01 E-value=61 Score=26.16 Aligned_cols=43 Identities=26% Similarity=0.302 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
+.++..|...|. .|...||.++.+.+++ +.++++|+..|...-
T Consensus 174 ~p~A~lL~~~gA----tVtv~h~~t~~L~~~~-----~~ADIVI~Avg~p~~ 216 (285)
T 3p2o_A 174 RPMATMLLNAGA----TVSVCHIKTKDLSLYT-----RQADLIIVAAGCVNL 216 (285)
T ss_dssp HHHHHHHHHTTC----EEEEECTTCSCHHHHH-----TTCSEEEECSSCTTC
T ss_pred HHHHHHHHHCCC----eEEEEeCCchhHHHHh-----hcCCEEEECCCCCCc
Confidence 344445555554 3455689888888776 458999999996433
No 358
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=30.95 E-value=1.2e+02 Score=21.71 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHh-hhcCCeEEEEecCcCCc
Q 032570 12 DAARTLSDFGVPYE-IKILPPHQNCKEALSYALSA-KERGIKIIIVGDGVEAH 62 (138)
Q Consensus 12 ~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~-~~~~~~viIa~AG~~a~ 62 (138)
-+.+.|+++|++.. ..+.. =.++.+.+-+++. ..+++++||+..|.+-.
T Consensus 44 ~L~~~L~~~G~~v~~~~iV~--Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 44 IIKQLLIENGHKIIGYSLVP--DDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp HHHHHHHHTTCEEEEEEEEC--SCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred HHHHHHHHCCCEEEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 35778899998743 33331 2333444433333 34568999998887643
No 359
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=30.83 E-value=89 Score=29.19 Aligned_cols=52 Identities=10% Similarity=0.148 Sum_probs=39.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccC------------CCchHHHHHHHHhhhcCCeEEEEe
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPH------------QNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaH------------R~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
..+.+.+++..+..++.+||+|+.+.... |-| ...+++++..++|.++++-+
T Consensus 302 Y~~~~ev~~vv~~~r~~~IPlDvi~~Didym~~~~~FT~d~~FP-dp~~mv~~Lh~~G~k~v~ii 365 (908)
T 3top_A 302 YQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSPKFA-GFPALINRMKADGMRVILIL 365 (908)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCCEEEECGGGSSTTCTTCCCGGGT-THHHHHHHHHHHTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCeeeEEeeccccccccccccCCCCC-CHHHHHHHHHHCCCEEEEEe
Confidence 34567788888889999999999887643 333 56678888888889976654
No 360
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=30.80 E-value=1.5e+02 Score=22.75 Aligned_cols=64 Identities=9% Similarity=-0.162 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhCC-CeEEEEEccCCCchHH-HHHHHHhhhcCCeEEEEecCcCCc--hhHHhhhcc
Q 032570 7 LPVMNDAARTLSDFGV-PYEIKILPPHQNCKEA-LSYALSAKERGIKIIIVGDGVEAH--LSGVAAANS 71 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi-~~~~~V~SaHR~p~~~-~~~~~~~~~~~~~viIa~AG~~a~--L~gvva~~t 71 (138)
..-.+++.+.|+.+|. ++++.-... +.+.+. .++.+...+...+++|-++|+.-. |+.+.|...
T Consensus 50 ~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~~iivnlsGG~Ril~l~~l~A~~l 117 (244)
T 2wte_A 50 RAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPEPIISDLTMGMRMINTLILLGIIV 117 (244)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCSSEEEECSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCCcEEEEecCCchHHHHHHHHHHHh
Confidence 3456778888888874 888777765 444443 445555444323899988887664 555666543
No 361
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=30.77 E-value=80 Score=22.66 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=29.7
Q ss_pred HHHhCCCeE-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC----chhHHhhhc
Q 032570 17 LSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA----HLSGVAAAN 70 (138)
Q Consensus 17 L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a----~L~gvva~~ 70 (138)
|+++|+... ..++ --.++.+.+-++++.++++++||+-.|.+- ..+-+++..
T Consensus 38 l~~~G~~v~~~~iv--~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~~D~t~ea~~~~ 94 (167)
T 2g2c_A 38 LQDYSYELISEVVV--PEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQTPEATASF 94 (167)
T ss_dssp ---CEEEEEEEEEE--CSSHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHTT
T ss_pred HHHCCCEEeEEEEe--CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcChHHHHHHH
Confidence 788887532 3333 344556666666655546899999888763 456666543
No 362
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=30.74 E-value=79 Score=23.43 Aligned_cols=99 Identities=14% Similarity=0.097 Sum_probs=62.4
Q ss_pred HHHHHHHHHHhCCCeE---EEEEccCCCchHHHHHHHHhhhcCCeEEEEec--CcCCchhHH----------hhhccCCc
Q 032570 10 MNDAARTLSDFGVPYE---IKILPPHQNCKEALSYALSAKERGIKIIIVGD--GVEAHLSGV----------AAANSQIL 74 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~---~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A--G~~a~L~gv----------va~~t~~P 74 (138)
.+-|.+.|++.|+..+ ++|-++.-.|-...++++ +.+++.||+.. |..-|-==| ++-.|.+|
T Consensus 18 l~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaLG~VG~T~Hfd~Va~~vs~Gl~~v~L~~~vP 94 (156)
T 2b99_A 18 ASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMALGMPGKAEKDKVCAHEASLGLMLAQLMTNKH 94 (156)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEecccCCcchhHHHHHHHHHHHHHHHhhhCCC
Confidence 4778899999999766 577788777766666554 45688777644 333332111 22358899
Q ss_pred EEEecCCCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHcc
Q 032570 75 VIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 123 (138)
Q Consensus 75 VIgvP~~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~ 123 (138)
|+...+.+.. .-.+ -+.. -..|.+..||..|.+++.+
T Consensus 95 V~~gt~~~~e-qa~~r~~g~-----------k~~nKG~EaA~aaiem~~l 132 (156)
T 2b99_A 95 IIEVFVHEDE-AKDDKELDW-----------LAKRRAEEHAENVYYLLFK 132 (156)
T ss_dssp EEEEECCGGG-SSSHHHHHH-----------HHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCHH-HHHHHhhcc-----------hhhhhHHHHHHHHHHHHHH
Confidence 9999333221 1133 2211 1234889999999999976
No 363
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=30.72 E-value=47 Score=23.95 Aligned_cols=24 Identities=17% Similarity=0.164 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
|++.|++-.|++.||+|+..-...
T Consensus 23 P~~~kvr~~L~~kgi~y~~~~v~~ 46 (253)
T 4f03_A 23 PNTWKIRYALNYKGLKYKTEWVEY 46 (253)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCG
T ss_pred hhHHHHHHHHHHcCCCCEEEEEcc
Confidence 899999999999999999877654
No 364
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=30.71 E-value=1.1e+02 Score=24.45 Aligned_cols=60 Identities=10% Similarity=0.127 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa------HR-~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv 67 (138)
+.++++.+.+++.|...+..++-. .| .|+.+.++++.+.+-|++.|-...=.-...|.-+
T Consensus 122 ~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v 188 (307)
T 1ydo_A 122 HILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQV 188 (307)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHH
Confidence 556677777778888766666543 22 4677777777776667775544432223345444
No 365
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=30.65 E-value=1.1e+02 Score=27.73 Aligned_cols=66 Identities=18% Similarity=0.095 Sum_probs=46.2
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEE------ccCC---CchHHHHHHHHhhhcCCeEEEEecCcCCchhHHh
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYEIKIL------PPHQ---NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 67 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~~~V~------SaHR---~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvv 67 (138)
.|.||+..+++..+.+++.|...+.-++ +++| +++.+.++++.+.+-|++.|-...=.-...|--+
T Consensus 218 ~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v 292 (718)
T 3bg3_A 218 DSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTAC 292 (718)
T ss_dssp CSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHH
T ss_pred ecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHH
Confidence 4678999999999999999976655443 4577 5788888888888778885544433333334443
No 366
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=30.44 E-value=1.6e+02 Score=24.05 Aligned_cols=66 Identities=14% Similarity=0.052 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 10 MNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 10 ~~~~~~~L~~~gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
-++..+..+++|+. -.+...+. +..+++.++.. ..+||+.-.-...++.-+=|-..-+|||.+|-.
T Consensus 419 ~~~l~~~~~~~~l~~~~v~~~g~-~~~~~~~~~~~-----~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~ 485 (568)
T 2vsy_A 419 DARLRAFAHAQGVDAQRLVFMPK-LPHPQYLARYR-----HADLFLDTHPYNAHTTASDALWTGCPVLTTPGE 485 (568)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECC-CCHHHHHHHGG-----GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCS
T ss_pred HHHHHHHHHHcCCChhHEEeeCC-CCHHHHHHHHh-----cCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCC
Confidence 44555556666765 34555442 33344444432 356666544332233333344566777776543
No 367
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=30.40 E-value=64 Score=26.03 Aligned_cols=44 Identities=16% Similarity=0.121 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
.+.++..|...|. + |...||.++.+.+++ +.++++|+..|...-
T Consensus 174 G~p~A~lL~~~gA--t--Vtv~hs~t~~L~~~~-----~~ADIVI~Avg~p~~ 217 (285)
T 3l07_A 174 GKPVSQLLLNAKA--T--VTTCHRFTTDLKSHT-----TKADILIVAVGKPNF 217 (285)
T ss_dssp HHHHHHHHHHTTC--E--EEEECTTCSSHHHHH-----TTCSEEEECCCCTTC
T ss_pred HHHHHHHHHHCCC--e--EEEEeCCchhHHHhc-----ccCCEEEECCCCCCC
Confidence 3445555555555 3 444598888888776 458999999986443
No 368
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=30.36 E-value=20 Score=27.64 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=26.4
Q ss_pred CCchHHHHHH----HHhhhcCCeE-EEEecCcCC-chhHHhhhccCCcEEEe
Q 032570 33 QNCKEALSYA----LSAKERGIKI-IIVGDGVEA-HLSGVAAANSQILVIRV 78 (138)
Q Consensus 33 R~p~~~~~~~----~~~~~~~~~v-iIa~AG~~a-~L~gvva~~t~~PVIgv 78 (138)
|+++.+.+++ +..++.|++. +|++-..+. ++. -+...+..|||++
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~~~~~~-~lr~~~~iPvigi 92 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALE-EMQKYSKIPIVGV 92 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHHHHTHH-HHHHHCSSCEECS
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHH-HHHHhCCCCEEee
Confidence 5566665544 4455668884 444444442 444 3445578999995
No 369
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*
Probab=30.30 E-value=48 Score=24.27 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNC 35 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p 35 (138)
-+.++++.-.|++.|++|+......++.|
T Consensus 12 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~ 40 (242)
T 3ubk_A 12 SNYVNKVKLGILEKGLEYEQIRIAPSQEE 40 (242)
T ss_dssp CHHHHHHHHHHHHHTCCEEEECCCCCCCH
T ss_pred ChHHHHHHHHHHHcCCCcEEEecCCccCH
Confidence 47789999999999999998776555443
No 370
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=30.18 E-value=1.6e+02 Score=23.82 Aligned_cols=55 Identities=15% Similarity=0.133 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEE-ccCCC--------chHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKIL-PPHQN--------CKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~-SaHR~--------p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
+....+.+.+.|+++|.... +. .+.+. -+|..++-+-+.+..+++|+++-|+.+.
T Consensus 23 ~~~~~~~~~~~L~~~G~~v~--~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 86 (346)
T 4eys_A 23 VKHEVDLGIQRLKDLGLNPI--FLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAIGGDDT 86 (346)
T ss_dssp GHHHHHHHHHHHHHTTCEEE--ECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECCCCSCG
T ss_pred CHHHHHHHHHHHHhCCCEEE--ECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEcccccCH
Confidence 34567899999999998544 32 22232 2455666666666789999999998554
No 371
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=30.15 E-value=49 Score=22.58 Aligned_cols=40 Identities=5% Similarity=-0.043 Sum_probs=30.6
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEE-----EEccCCCchHHHHHHHHh
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIK-----ILPPHQNCKEALSYALSA 45 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~-----V~SaHR~p~~~~~~~~~~ 45 (138)
+.|=.+++.++.+.+++-|++|+++ |-+ ..+++.+.++++
T Consensus 19 ~~svs~~Va~~i~~i~~sGl~y~~~pm~T~IEG---e~devm~vv~~~ 63 (104)
T 1lxj_A 19 SASISDFVALIEKKIRESPLKSTLHSAGTTIEG---PWDDVMGLIGEI 63 (104)
T ss_dssp CSCCHHHHHHHHHHHHTSSSEEEEETTEEEEEE---EHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCeEeCCCccEEEc---CHHHHHHHHHHH
Confidence 4677899999999999999998752 332 357888877655
No 372
>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}
Probab=30.06 E-value=49 Score=24.12 Aligned_cols=37 Identities=5% Similarity=-0.126 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 43 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~ 43 (138)
-+.++++.-.|++.|++||...........+-.+|.+
T Consensus 11 s~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 47 (238)
T 4exj_A 11 TGNGRKPLVLGKLLNAPIKVHMFHWPTKDIQEDWYLK 47 (238)
T ss_dssp STTTHHHHHHHHHTTCSEEEEECC-CCSGGGSHHHHH
T ss_pred CCchHHHHHHHHHcCCCceEEEecccCCccCCHHHHh
Confidence 4567899999999999999887775443333344443
No 373
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=29.80 E-value=1.5e+02 Score=23.87 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.++++|+.++.......-+.+++.+.++++.++ .++=|++
T Consensus 50 ~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlV 99 (286)
T 4a5o_A 50 QVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILV 99 (286)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEE
Confidence 456777788999999999999999999999999999888654 4444443
No 374
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=29.77 E-value=1e+02 Score=21.94 Aligned_cols=59 Identities=8% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcC----CchhHHhhhccCC
Q 032570 13 AARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE----AHLSGVAAANSQI 73 (138)
Q Consensus 13 ~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~----a~L~gvva~~t~~ 73 (138)
.+..|+++|+... ..++ --.++.+.+.++++.++ ++++||+..|.+ ...+-+++.....
T Consensus 26 l~~~l~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~~~~ 90 (164)
T 2is8_A 26 IREVLAGGPFEVAAYELV--PDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRELLDR 90 (164)
T ss_dssp HHHHHTTSSEEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHTTCSE
T ss_pred HHHHHHHCCCeEeEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCChHHHHHHHhCC
Confidence 5667888887543 3333 23455666666555443 689999887775 4556666654433
No 375
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=29.57 E-value=76 Score=23.19 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
-+.++++.-.|++.|++||......-
T Consensus 21 sp~~~~vr~~L~~~gi~~e~~~v~~~ 46 (231)
T 4dej_A 21 DLKSHQVRLVLAEKGVGVEITYVTDE 46 (231)
T ss_dssp CHHHHHHHHHHHHHTCBCEEEECCSS
T ss_pred ChHHHHHHHHHHHcCCCcEEEEcCcc
Confidence 37899999999999999998776543
No 376
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=29.51 E-value=1.5e+02 Score=23.82 Aligned_cols=49 Identities=16% Similarity=0.286 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.++++|+.++.......-+.+++.+.++++.++ .++=|++
T Consensus 49 ~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlv 98 (285)
T 3l07_A 49 KTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILV 98 (285)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEEE
Confidence 456677788999999999999999999999999999888654 4444443
No 377
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=29.42 E-value=90 Score=25.01 Aligned_cols=70 Identities=11% Similarity=0.080 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCC-------Cc-hHHHHHHHHhhhcCCeEEEEecCcCCc---hh----HHhhhc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQ-------NC-KEALSYALSAKERGIKIIIVGDGVEAH---LS----GVAAAN 70 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR-------~p-~~~~~~~~~~~~~~~~viIa~AG~~a~---L~----gvva~~ 70 (138)
+.+..+.+.+.|+++|....+.=. +.+ ++ +|..++-+-+.+..++.|+++-|+.+. || -.+. .
T Consensus 28 ~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~rlL~~LD~~~i~-~ 105 (327)
T 4h1h_A 28 ADNQVEIAVNRLTDMGFKVTFGEH-VAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLIS-E 105 (327)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCGGGGGGGCCHHHHH-H
T ss_pred CHHHHHHHHHHHHhCCCEEEECcc-hhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhHHHHhhhcchhhhc-c
Confidence 556788999999999985443210 111 22 466677666677789999999998765 33 2443 3
Q ss_pred cCCcEEE
Q 032570 71 SQILVIR 77 (138)
Q Consensus 71 t~~PVIg 77 (138)
-+++.+|
T Consensus 106 ~PK~~~G 112 (327)
T 4h1h_A 106 NPKILCG 112 (327)
T ss_dssp SCCEEEE
T ss_pred CCeEEEe
Confidence 5677777
No 378
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*
Probab=29.42 E-value=42 Score=24.42 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCch
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCK 36 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~ 36 (138)
-+.++++.-.|++.|++||.........++
T Consensus 32 sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~ 61 (239)
T 3q18_A 32 CPYSHRTRLVLKAKDIRHEVVNINLRNKPE 61 (239)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEBCSSSCCG
T ss_pred ChHHHHHHHHHHHcCCCcEEEecCcccCCH
Confidence 378999999999999999988776544333
No 379
>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*
Probab=29.38 E-value=29 Score=24.43 Aligned_cols=24 Identities=8% Similarity=0.076 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++|+......
T Consensus 12 p~~~~v~~~L~~~gi~~e~~~v~~ 35 (211)
T 1gnw_A 12 IATRRVLIALHEKNLDFELVHVEL 35 (211)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCG
T ss_pred cchHHHHHHHHhcCCCcEEEEecc
Confidence 688999999999999999887765
No 380
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=29.33 E-value=1e+02 Score=20.89 Aligned_cols=69 Identities=9% Similarity=-0.041 Sum_probs=37.8
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh--hccCCcEEEecC
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANSQILVIRVPL 80 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva--~~t~~PVIgvP~ 80 (138)
.+|-+ .+++..+..++.|+++++.-.+.-. +.++. +++||+...=-..-.+.-+-. .....||.-+|+
T Consensus 17 mSTsl-lv~km~~~a~~~gi~v~i~a~~~~~----~~~~~-----~~~DvvLLgPQV~y~~~~ik~~~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 17 GTSAQ-LANAINEGANLTEVRVIANSGAYGA----HYDIM-----GVYDLIILAPQVRSYYREMKVDAERLGIQIVATRG 86 (108)
T ss_dssp SHHHH-HHHHHHHHHHHHTCSEEEEEEETTS----CTTTG-----GGCSEEEECGGGGGGHHHHHHHHTTTTCEEEECCH
T ss_pred CCHHH-HHHHHHHHHHHCCCceEEEEcchHH----HHhhc-----cCCCEEEEChHHHHHHHHHHHHhhhcCCcEEEeCH
Confidence 33444 6778888888888877765544422 11111 236777765444444444432 223467666665
Q ss_pred C
Q 032570 81 L 81 (138)
Q Consensus 81 ~ 81 (138)
.
T Consensus 87 ~ 87 (108)
T 3nbm_A 87 M 87 (108)
T ss_dssp H
T ss_pred H
Confidence 4
No 381
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=29.28 E-value=1.6e+02 Score=24.78 Aligned_cols=61 Identities=10% Similarity=0.088 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCC-chHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 68 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~-p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva 68 (138)
+.+.++.+.+++.|+...+...-++|. |+.+.++++.+.+-|++.|-...=.-...|.-+.
T Consensus 151 ~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~ 212 (423)
T 3ivs_A 151 DSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVY 212 (423)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHH
Confidence 455667777888999887777778885 4677788888877788876555544455565444
No 382
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.26 E-value=1.2e+02 Score=19.81 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=29.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
.|....+.....|++.|. ++..+ .+.++..+.++ ...++++|.-..+
T Consensus 22 d~~~~~~~l~~~L~~~g~--~v~~~---~~~~~a~~~l~---~~~~dlvi~D~~l 68 (153)
T 3hv2_A 22 SQEVILQRLQQLLSPLPY--TLHFA---RDATQALQLLA---SREVDLVISAAHL 68 (153)
T ss_dssp SCHHHHHHHHHHHTTSSC--EEEEE---SSHHHHHHHHH---HSCCSEEEEESCC
T ss_pred CCHHHHHHHHHHhcccCc--EEEEE---CCHHHHHHHHH---cCCCCEEEEeCCC
Confidence 566777888888888873 44433 24455555443 4568888875544
No 383
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=29.20 E-value=92 Score=18.38 Aligned_cols=21 Identities=19% Similarity=0.392 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEI 26 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~ 26 (138)
.=+.|+++...|++.|++|+.
T Consensus 10 ~C~~C~~~~~~l~~~~i~~~~ 30 (81)
T 1h75_A 10 DCVQCHATKRAMENRGFDFEM 30 (81)
T ss_dssp TCHHHHHHHHHHHHTTCCCEE
T ss_pred CChhHHHHHHHHHHCCCCeEE
Confidence 347899999999999998864
No 384
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=29.02 E-value=87 Score=23.81 Aligned_cols=70 Identities=9% Similarity=-0.016 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhC-----CCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhH-HhhhccCCcEEEe
Q 032570 9 VMNDAARTLSDFG-----VPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSG-VAAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~~g-----i~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~g-vva~~t~~PVIgv 78 (138)
..+-+...+++.| .++++.+..-...|++..+.+++..+ ++++.||...+.....+- -+......|+|..
T Consensus 36 ~~~g~~~a~~~~ng~~~g~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~ 112 (375)
T 4evq_A 36 ITRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVP 112 (375)
T ss_dssp HHHHHHHHHHHTTTEETTEEEEEEEEECTTCHHHHHHHHHCCCCCSCCSEEEECSSHHHHHHHHHHHHHHCCCEEES
T ss_pred HHHHHHHHHHHhCCCcCCEEEEEEEecCCCCHHHHHHHHHHHHhcCCceEEEcCCccHHHHHHHHHHHHcCceEEec
Confidence 4444555666764 45888898889999998888887765 478888876544332221 1234568899864
No 385
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=29.01 E-value=1.6e+02 Score=23.67 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.++++|+.++.......-+.+++.+.++++.++ .++=|++
T Consensus 48 ~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlv 97 (285)
T 3p2o_A 48 QTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILV 97 (285)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEe
Confidence 456777788999999999999999888999999999888654 4444443
No 386
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=28.85 E-value=1.7e+02 Score=22.47 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh--cCCeEEEEecCcC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVE 60 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~--~~~~viIa~AG~~ 60 (138)
.|.+-+++..+.+++.|.++....+- -..++.+.+++++..+ ..++++|--||..
T Consensus 39 ~~~~~~~~~~~~i~~~g~~~~~~~~D-vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 39 LLEDRLNQIVQELRGMGKEVLGVKAD-VSKKKDVEEFVRRTFETYSRIDVLCNNAGIM 95 (254)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 46677888888899888876554443 3677888888877644 4789999999864
No 387
>1lng_A SRP19, signal recognition particle 19 kDa protein; protein-RNA complex, signaling protein/RNA complex; 2.30A {Methanocaldococcus jannaschii} SCOP: d.201.1.1 PDB: 2v3c_A 3ndb_A 1l9a_A*
Probab=28.74 E-value=22 Score=23.89 Aligned_cols=21 Identities=24% Similarity=0.550 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEI 26 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~ 26 (138)
+-|.++|+.+.|+.+|+++.+
T Consensus 27 ~~P~~~EI~~a~~~lgl~~~~ 47 (87)
T 1lng_A 27 EKPSLKDIEKALKKLGLEPKI 47 (87)
T ss_dssp SSCCHHHHHHHHHHTTCCCEE
T ss_pred cCCCHHHHHHHHHHcCCCeEE
Confidence 357789999999999999865
No 388
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=28.70 E-value=2.1e+02 Score=22.37 Aligned_cols=112 Identities=11% Similarity=0.050 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHH-HhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC-chhH-----Hhhhcc-CCcEEE
Q 032570 6 DLPVMNDAARTLS-DFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSG-----VAAANS-QILVIR 77 (138)
Q Consensus 6 D~~~~~~~~~~L~-~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a-~L~g-----vva~~t-~~PVIg 77 (138)
|.....++.+.+. ..++|.-+++..-....+. .++++.+++.|++.|++-.|... .+.+ .+.... ..|||+
T Consensus 110 ~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~-~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~~ipVi~ 188 (318)
T 1vhn_A 110 DLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEV-EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEKRIPTFV 188 (318)
T ss_dssp CHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCH-HHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCCSSCEEE
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEecCCCChHHH-HHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHcCCeEEE
Confidence 5666777766665 4788888888753333333 37888888889998887654321 1111 111110 567776
Q ss_pred ecCCCCCCCchhhhhhhc-C-CCCCeeeEEecCCchhHHHHHHHHH
Q 032570 78 VPLLSEDWSEDDVINSIR-M-PSHVQVASVPRNNAKNAALYAVKVL 121 (138)
Q Consensus 78 vP~~~~~~~G~dLlS~lq-m-P~GvpvatV~I~~~~nAA~~AaqIl 121 (138)
. ++-.++.|....++ . ..+|.++.-.+.||.-......++.
T Consensus 189 ~---GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~ 231 (318)
T 1vhn_A 189 S---GDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLR 231 (318)
T ss_dssp E---SSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHH
T ss_pred E---CCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHh
Confidence 2 33235555444444 2 4566666666667776666655544
No 389
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=28.55 E-value=71 Score=25.51 Aligned_cols=46 Identities=15% Similarity=0.186 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCC-eEEEEE----ccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 11 NDAARTLSDFGVP-YEIKIL----PPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 11 ~~~~~~L~~~gi~-~~~~V~----SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
++..++|+++|++ +.+||- .-+-..+++.++++.+++.|.+|++-.
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4457788999998 345553 233456788888899999999999985
No 390
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=28.46 E-value=1.6e+02 Score=20.99 Aligned_cols=56 Identities=11% Similarity=0.160 Sum_probs=33.8
Q ss_pred HHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcC----CchhHHhhhc
Q 032570 13 AARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE----AHLSGVAAAN 70 (138)
Q Consensus 13 ~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~----a~L~gvva~~ 70 (138)
....|+++|+... ..++ --.++.+.+-++++.+ +++++||+..|.+ ...+-+++..
T Consensus 36 l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~ 97 (169)
T 1y5e_A 36 LHELLKEAGHKVTSYEIV--KDDKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDVTIEAVSAL 97 (169)
T ss_dssp HHHHHHHHTCEEEEEEEE--CSSHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCCHHHHHHTT
T ss_pred HHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCCcHHHHHHH
Confidence 5667889998643 3333 2344556555555543 3689999887775 3455555543
No 391
>1kvn_A SRP19; RNA binding protein; NMR {Archaeoglobus fulgidus} SCOP: d.201.1.1 PDB: 1kvv_A
Probab=28.33 E-value=24 Score=24.54 Aligned_cols=22 Identities=5% Similarity=0.241 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIK 27 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~ 27 (138)
+-|.++|+.+.|+.+|+++++-
T Consensus 30 ~nP~~~EI~~a~~~Lgl~~~vE 51 (104)
T 1kvn_A 30 PNVKLHELVEASKELGLKFRAE 51 (104)
T ss_dssp SSCCHHHHHHHHHHHTSSEEEC
T ss_pred cCCCHHHHHHHHHHcCCCeEEe
Confidence 3477899999999999999775
No 392
>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A*
Probab=28.29 E-value=88 Score=22.20 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc-CCCc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP-HQNC 35 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p 35 (138)
-+.++++.-.|++.|++|+...... |+.+
T Consensus 13 sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~ 42 (219)
T 2vo4_A 13 SPFGMRVRIALAEKGIKYEYKEEDLRNKSP 42 (219)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCTTSCCH
T ss_pred CchHHHHHHHHHHcCCCceEEecCcccCCH
Confidence 4789999999999999999876654 4433
No 393
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=28.20 E-value=62 Score=26.39 Aligned_cols=44 Identities=18% Similarity=0.098 Sum_probs=31.0
Q ss_pred HHHHHhhhc--CCeEEEEecCcCCchhHHhhhc------cCCcEEEecCCCC
Q 032570 40 SYALSAKER--GIKIIIVGDGVEAHLSGVAAAN------SQILVIRVPLLSE 83 (138)
Q Consensus 40 ~~~~~~~~~--~~~viIa~AG~~a~L~gvva~~------t~~PVIgvP~~~~ 83 (138)
|+.++.... .++.|++..|.-+.++|+..+. ....||+|-+...
T Consensus 212 Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~ 263 (398)
T 4d9i_A 212 EAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKA 263 (398)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTS
T ss_pred HHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCC
Confidence 444554432 3899999999988899988776 2345999877543
No 394
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=28.13 E-value=1.5e+02 Score=23.66 Aligned_cols=68 Identities=9% Similarity=0.046 Sum_probs=48.2
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeEEEEEc--cCCCchHHHHHHHHhhhcCC-eEEEEe-------cCcCCchhHHhhhc
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERGI-KIIIVG-------DGVEAHLSGVAAAN 70 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~~~V~S--aHR~p~~~~~~~~~~~~~~~-~viIa~-------AG~~a~L~gvva~~ 70 (138)
.+.+|.+.+.+..+.+.++|+. .+.++- =..+|+.+.++++..+++-. ++-|.+ -|.+|.|..+-+|-
T Consensus 143 a~~~~~e~~~~ia~~~~~~Ga~-~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa 220 (345)
T 1nvm_A 143 SHMIPAEKLAEQGKLMESYGAT-CIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGC 220 (345)
T ss_dssp TTSSCHHHHHHHHHHHHHHTCS-EEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHCCCC-EEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCC
Confidence 5678999999999999999986 455542 35679999999988765432 555655 33366666666653
No 395
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=28.13 E-value=1.3e+02 Score=24.64 Aligned_cols=51 Identities=10% Similarity=0.123 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHhCCC-------eE--------------------EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 5 LDLPVMNDAARTLSDFGVP-------YE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~-------~~--------------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
-|+.-+.+-...|+++|+. ++ ..|-+-.=+.++++++++.+.++|.+||+=
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 117 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVD 117 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4666665556888999995 22 234444457889999999999999999874
No 396
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=28.10 E-value=1.2e+02 Score=19.33 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=34.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh---hcCCeEEEEecCcC
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK---ERGIKIIIVGDGVE 60 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~---~~~~~viIa~AG~~ 60 (138)
+.|....+.....|+++|..+++..+ .+.++..+++++.. ...++++|.-..+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~~~v~~~---~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~ 70 (143)
T 2qvg_A 14 EDDEVDIQSVERVFHKISSLIKIEIA---KSGNQALDMLYGRNKENKIHPKLILLDINIP 70 (143)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCCEEEE---SSHHHHHHHHHTCTTCCCCCCSEEEEETTCT
T ss_pred eCCHHHHHHHHHHHHHhCCCceEEEE---CCHHHHHHHHHhcccccCCCCCEEEEecCCC
Confidence 35777888889999999876565554 23455555554211 14588888865553
No 397
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=28.05 E-value=1.6e+02 Score=23.70 Aligned_cols=72 Identities=17% Similarity=0.088 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCC-------C-chHHHHHHHHhhhcCCeEEEEecCcCCch---h----HHhhh
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAHL---S----GVAAA 69 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR-------~-p~~~~~~~~~~~~~~~~viIa~AG~~a~L---~----gvva~ 69 (138)
-|.+..+++.+.|+++|....+. -.+.+ + -+|..++.+-+.+..+++|+++-|+.++. | ..+..
T Consensus 29 ~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~rlLp~LD~~~i~~ 107 (311)
T 1zl0_A 29 IATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLLPGLDWGRLQA 107 (311)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGGGGTTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHHHHhhccchhhhhc
Confidence 35667799999999999875543 11211 2 24555565666777899999999987654 3 33332
Q ss_pred ccCCcEEE
Q 032570 70 NSQILVIR 77 (138)
Q Consensus 70 ~t~~PVIg 77 (138)
-.+++.+|
T Consensus 108 a~PK~~iG 115 (311)
T 1zl0_A 108 ASPRPLIG 115 (311)
T ss_dssp SCCCCEEE
T ss_pred cCCCEEEE
Confidence 15677776
No 398
>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*
Probab=28.03 E-value=96 Score=21.98 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCC--CeEEEEEccCC
Q 032570 7 LPVMNDAARTLSDFGV--PYEIKILPPHQ 33 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi--~~~~~V~SaHR 33 (138)
-+.++++.-.|++.|+ +|++.......
T Consensus 27 sp~~~~v~~~L~~~gi~~~~~~~~v~~~~ 55 (233)
T 3ibh_A 27 GPYPARVRIALAEKNMLSSVQFVRINLWK 55 (233)
T ss_dssp CHHHHHHHHHHHHTTCGGGCEEEECCGGG
T ss_pred CCccHHHHHHHHhcCCCCCceEEEecccc
Confidence 3688999999999999 99988776543
No 399
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=28.00 E-value=1.5e+02 Score=24.19 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHH-hCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 7 LPVMNDAARTLSD-FGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 7 ~~~~~~~~~~L~~-~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
.+.++++.+.+++ ..+|.-+++.. .-...++.+.++.+...+...|+
T Consensus 178 ~e~l~~il~av~~~~~~PV~vKi~p-~~~~~~~a~~~~~aga~~i~~in 225 (345)
T 3oix_A 178 FETTDQILSEVFTYFTKPLGIKLPP-YFDIVHFDQAAAIFNXYPLTFVN 225 (345)
T ss_dssp HHHHHHHHHHHTTTCCSCEEEEECC-CCCHHHHHHHHHHHTTSCCSEEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECC-CCCHHHHHHHHHHhCCCceEEEE
Confidence 3344444444432 34555555542 23444444444444444444444
No 400
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=28.00 E-value=1e+02 Score=25.47 Aligned_cols=51 Identities=20% Similarity=0.326 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHhCCC---------------e---E-EEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVP---------------Y---E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~---------------~---~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
|+.=+.+-...|+++||. | + ..|-+-.-+.++++++++.+.++|.+||+=+
T Consensus 54 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 54 DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 565555556788999995 1 2 3455555678999999999999999998643
No 401
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=27.92 E-value=1.5e+02 Score=27.98 Aligned_cols=52 Identities=10% Similarity=-0.043 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccC---------------CCchHHHHHHHHhhhcCCeEEEEec
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaH---------------R~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
.+.+.+++..+.+++.|||+|+-+...+ |-|+ ..+++++..++|.++++-+.
T Consensus 445 ~sq~ev~~va~~~re~gIPlDvi~lD~~y~~~~~~~dFtwD~~rFPd-p~~mv~~Lh~~G~k~vl~V~ 511 (1020)
T 2xvl_A 445 KSSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSHDFDKQFFPD-PKALVDKVHAMNAQIMISVW 511 (1020)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCEEEECSCCSCTTCTTSCCCCTTTCSC-HHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCcceEEEeccccccCcccceEEChhhCCC-HHHHHHHHHHCCCEEEEEEC
Confidence 3566677888888999999998887652 3444 67888888889999877553
No 402
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=27.90 E-value=49 Score=30.35 Aligned_cols=26 Identities=27% Similarity=0.217 Sum_probs=18.8
Q ss_pred CchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 34 NCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 34 ~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
+++...+.++++++.+++.+|++-|-
T Consensus 94 ~~~~~~~~~~~l~~~~Id~LvvIGGd 119 (762)
T 3o8l_A 94 EREGRLRAAHNLVKRGITNLCVIGGD 119 (762)
T ss_dssp SHHHHHHHHHHHHHHCCCEEEEEECH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 44556677778888888888887664
No 403
>1r31_A 3-hydroxy-3-methylglutaryl-coenzyme A reductase; 4-electron oxido-reductase, oxidoreductase; HET: COA MEV; 2.10A {Pseudomonas mevalonii} SCOP: d.58.20.1 d.179.1.1 PDB: 1qay_A* 1qax_A* 1r7i_A 1t02_A*
Probab=27.77 E-value=20 Score=30.79 Aligned_cols=36 Identities=22% Similarity=0.505 Sum_probs=28.3
Q ss_pred CchhhhhhhcCCCCCeeeEEecCCchhH---HHHHHHHHccCCH
Q 032570 86 SEDDVINSIRMPSHVQVASVPRNNAKNA---ALYAVKVLGIADE 126 (138)
Q Consensus 86 ~G~dLlS~lqmP~GvpvatV~I~~~~nA---A~~AaqIl~~~~~ 126 (138)
+| ||.-++.|| ++|+||+ |+.+- +..+-+||+..+.
T Consensus 312 ~g-~L~~svtlP--l~VGtVG--Ggt~l~p~~~~~L~iLg~~~A 350 (428)
T 1r31_A 312 NG-HLVGTLEMP--MPVGLVG--GATKTHPLAQLSLRILGVKTA 350 (428)
T ss_dssp TS-CEEEEEEEE--CCCCSBS--THHHHCHHHHHHHHHHTCSSH
T ss_pred CC-eEEEEEEee--eeEEEec--CccccCHHHHHHHHHhCCcCH
Confidence 44 799999999 9999998 77654 5577889988654
No 404
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=27.77 E-value=1.7e+02 Score=23.71 Aligned_cols=49 Identities=12% Similarity=0.004 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.++++|+.++.......-+.+++.+.++++.++ .++=|++
T Consensus 52 ~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIlV 101 (300)
T 4a26_A 52 KKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIV 101 (300)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEE
Confidence 456777788999999999999999999999999999888654 4444443
No 405
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=27.75 E-value=91 Score=24.39 Aligned_cols=61 Identities=18% Similarity=0.125 Sum_probs=47.4
Q ss_pred HHHhCCCeEEEEEc--cCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 17 LSDFGVPYEIKILP--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 17 L~~~gi~~~~~V~S--aHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
+++||+.. +.+.+ .=-+|+++.++++..+++++++|+.=...+.-+.-.+|..+..||+-+
T Consensus 204 ~~~yGl~~-~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~l 266 (291)
T 1pq4_A 204 ARDYNLVQ-IPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELL 266 (291)
T ss_dssp HHHTTCEE-EESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEE
T ss_pred HHHCCCEE-eecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEE
Confidence 35677762 22222 224778999999999999999999999999999999998898888754
No 406
>1fui_A L-fucose isomerase; ketol isomerase, fucose metabolism, L-fucose to L conversion; HET: FOC; 2.50A {Escherichia coli} SCOP: b.43.2.1 c.85.1.1
Probab=27.72 E-value=3.2e+02 Score=24.13 Aligned_cols=83 Identities=8% Similarity=-0.083 Sum_probs=47.9
Q ss_pred CCeEEEE-EccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhcc-CCcEEEecCCCCCCCchh-hhhhhcC--
Q 032570 22 VPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS-QILVIRVPLLSEDWSEDD-VINSIRM-- 96 (138)
Q Consensus 22 i~~~~~V-~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t-~~PVIgvP~~~~~~~G~d-LlS~lqm-- 96 (138)
.|+++-. -+.--..++.....+..++.+++.+|+.-.-=+-=.-.+ -.. ..||+-.........|.+ |.+.+..
T Consensus 51 ~pvevV~~~~~i~~~~~a~~~~e~f~~~~vd~vi~~~~tf~~~~e~l-~~~~~~Pvli~~~~~~~~pg~v~l~a~~aa~~ 129 (591)
T 1fui_A 51 AAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETI-DMDPTRPKAIWGFNGTERPGAVYLAAALAAHS 129 (591)
T ss_dssp CBCCEEECSSCBCSHHHHHHHHHHHHTTTEEEEEEEESSCCCHHHHS-CCCSSSCEEEEECBCSSSBHHHHHHHHHHHHH
T ss_pred CCeEEEECCCccCCHHHHHHHHHHhhccCCCEEEEEcCcCCchHHHH-HhcCCCCEEEeCCCCCCCCchHHHHHHHHHHH
Confidence 6677665 334555566666777777778898887655211101222 233 788887755554566766 5543321
Q ss_pred CCCCeeeEE
Q 032570 97 PSHVQVASV 105 (138)
Q Consensus 97 P~GvpvatV 105 (138)
=-|+|...+
T Consensus 130 ~~Gip~~~i 138 (591)
T 1fui_A 130 QKGIPAFSI 138 (591)
T ss_dssp HTTCCCEEE
T ss_pred hcCCCeEEE
Confidence 147776555
No 407
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=27.71 E-value=1.3e+02 Score=24.51 Aligned_cols=103 Identities=14% Similarity=0.053 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH---HHHhhhcCCeEEEEe---cCcCC--------------chhHH
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY---ALSAKERGIKIIIVG---DGVEA--------------HLSGV 66 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~---~~~~~~~~~~viIa~---AG~~a--------------~L~gv 66 (138)
+.++.+.++.|++.|+. +.|.-.-|..+....+ ++.+.+.++++||-+ ||... .|+..
T Consensus 40 L~iA~~l~~~L~~~G~~--V~V~m~tR~~D~~~~L~~R~~~An~~~ADlfISIH~Na~~a~G~evyy~~~~~~s~~LA~~ 117 (326)
T 1xov_A 40 EKVLNAASDELKREGHN--VKTFIDRTSTTQSANLNKIVNWHNANPADVHISVHLNAGKGTGVEVWYYAGDEKGRKLAVE 117 (326)
T ss_dssp HHHHHHHHHHHHHTTCE--EEEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEEEEECSSCCSEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCc--eEEEEecCCCCccCCHHHHHHHHHhcCCCEEEEEeccCCCCCEEEEEEeCCCHHHHHHHHH
Confidence 57889999999999864 3333234665544443 344455688999987 32111 12222
Q ss_pred hhh----ccCCcEEEecCCCCCCCchhhhhhhcCCCCCeeeEEecCCchhHHHH
Q 032570 67 AAA----NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALY 116 (138)
Q Consensus 67 va~----~t~~PVIgvP~~~~~~~G~dLlS~lqmP~GvpvatV~I~~~~nAA~~ 116 (138)
|.. .+..+-=|+-. -.++-+|---+|| .+=|=+-.|+|+.-++++
T Consensus 118 I~~~l~~~~g~~~RGvk~----~~~~~vLr~t~~P-aVLVE~GFisN~~D~~~L 166 (326)
T 1xov_A 118 ISAKMAKALGLPNRGAKA----TKDLRFLNSTKGT-AVLLEVCFVDRKEDANAI 166 (326)
T ss_dssp HHHHHHHHHTCCEEEEEE----ESCCHHHHHCSSC-EEEEEEEETTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCccc----cCCceeecCCCCC-EEEEEecCCCCHHHHHHh
Confidence 211 12222222211 1223455556777 455666677888887654
No 408
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.64 E-value=1.5e+02 Score=21.83 Aligned_cols=67 Identities=10% Similarity=-0.131 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC----CchhHHhhhccCCcEEEecC
Q 032570 11 NDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE----AHLSGVAAANSQILVIRVPL 80 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~----a~L~gvva~~t~~PVIgvP~ 80 (138)
.-.++.|+++|+... .+++ --.++.+.+.++++.++ ++++|+..|.+ ...+-+++.....++..-|-
T Consensus 26 ~~l~~~L~~~G~~v~~~~iv--~Dd~~~I~~~l~~a~~~-~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 26 AFIGNFLTYHGYQVRRGFVV--MDDLDEIGWAFRVALEV-SDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp HHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHH-CSEEEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred HHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhc-CCEEEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 346678899998643 3343 34566666666655444 89999877664 45677887776777665443
No 409
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=27.36 E-value=29 Score=24.41 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=19.0
Q ss_pred CcCCHHHHHHHHHHHHHhCCCe
Q 032570 3 SDLDLPVMNDAARTLSDFGVPY 24 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~ 24 (138)
++-|...++.+.+.|+++|+|.
T Consensus 31 ~sMdESTAKGifKyL~elGvPa 52 (115)
T 2es9_A 31 HSMDESTAKGILKYLHDLGVPV 52 (115)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCC
T ss_pred CccchHHHHHHHHHHHHcCCCC
Confidence 3458899999999999999983
No 410
>4id0_A Glutathione S-transferase-like protein YIBF; GST, enzyme function initiative, structural genomics; HET: GSF; 1.10A {Pseudomonas fluorescens} PDB: 4ibp_A*
Probab=27.27 E-value=47 Score=23.44 Aligned_cols=25 Identities=12% Similarity=0.183 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
-+.++++.-.|++.|++|++.....
T Consensus 11 s~~~~~v~~~L~~~gi~y~~~~v~~ 35 (214)
T 4id0_A 11 SPYVRKVMVLLHETGQLNRVALQAS 35 (214)
T ss_dssp CHHHHHHHHHHHHHTCGGGEEEEEC
T ss_pred CChHHHHHHHHHHcCCCcceEEeec
Confidence 4678999999999999998876654
No 411
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=27.26 E-value=88 Score=21.69 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhh-ccCCcEEEecCC
Q 032570 10 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRVPLL 81 (138)
Q Consensus 10 ~~~~~~~L~~~gi-~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~-~t~~PVIgvP~~ 81 (138)
..+..+.+++.|+ +.++.-++.+..++ ++++||... .|...... ....|||.+.+.
T Consensus 31 ~~klkk~~~e~gi~~~~V~~~~i~e~~~------------~~DlIist~----~l~~~~~~~~~~ipVi~V~~~ 88 (125)
T 1vkr_A 31 AGVLRKKIQDAGLSQISVTNSAINNLPP------------DVDLVITHR----DLTERAMRQVPQAQHISLTNF 88 (125)
T ss_dssp HHHHHHHHHHTTCTTSEEEECCTTCCCT------------TCSEEEEEH----HHHHHHHHHCTTSEEEEESCT
T ss_pred HHHHHHHHHHCCCceEEEEEeeHHHCCC------------CCCEEEECC----ccchhhhccCCCCCEEEEecC
Confidence 4677888888898 88887777766542 367888754 33322211 246788887664
No 412
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=27.11 E-value=1.1e+02 Score=19.86 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHhCCC---eEEEEEc
Q 032570 5 LDLPVMNDAARTLSDFGVP---YEIKILP 30 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~---~~~~V~S 30 (138)
+.=+.|+++...|+++|++ |+..=+.
T Consensus 27 ~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~ 55 (114)
T 2hze_A 27 YTCPFCRNALDILNKFSFKRGAYEIVDIK 55 (114)
T ss_dssp TTCHHHHHHHHHHTTSCBCTTSEEEEEGG
T ss_pred CCChhHHHHHHHHHHcCCCcCceEEEEcc
Confidence 3447899999999999999 7654443
No 413
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=27.08 E-value=1.3e+02 Score=19.83 Aligned_cols=22 Identities=9% Similarity=0.031 Sum_probs=17.2
Q ss_pred CHHHHHHH-HHHHHHhC---CCeEEE
Q 032570 6 DLPVMNDA-ARTLSDFG---VPYEIK 27 (138)
Q Consensus 6 D~~~~~~~-~~~L~~~g---i~~~~~ 27 (138)
-=+.|+++ ...|+++| ++|+..
T Consensus 34 ~Cp~C~~alk~~L~~~~~~~i~~~~v 59 (118)
T 3c1r_A 34 YCPYCHAALNTLFEKLKVPRSKVLVL 59 (118)
T ss_dssp SCHHHHHHHHHHHTTSCCCGGGEEEE
T ss_pred CCcCHHHHHHHHHHHcCCCCCCeEEE
Confidence 34789999 99999999 876643
No 414
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=27.08 E-value=2.1e+02 Score=21.71 Aligned_cols=25 Identities=8% Similarity=0.201 Sum_probs=11.2
Q ss_pred chHHHHHHHH-h-hhcCCe-EEEEecCc
Q 032570 35 CKEALSYALS-A-KERGIK-IIIVGDGV 59 (138)
Q Consensus 35 p~~~~~~~~~-~-~~~~~~-viIa~AG~ 59 (138)
++.+.++++. . ...+++ ||+.|.++
T Consensus 164 ~~~~~~~~~~~l~~~~~adaivL~CT~l 191 (240)
T 3ixl_A 164 TATLVDLCVRAFEAAPDSDGILLSSGGL 191 (240)
T ss_dssp HHHHHHHHHHHHHTSTTCSEEEEECTTS
T ss_pred HHHHHHHHHHHhhcCCCCCEEEEeCCCC
Confidence 4445555554 3 334454 33344433
No 415
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=26.95 E-value=2.3e+02 Score=22.22 Aligned_cols=124 Identities=10% Similarity=0.023 Sum_probs=61.2
Q ss_pred CCCc-CCHHHHHHHHHHHHHhCCCeEEEEE-cc-----CCCchH--HHHHHHHh-hhcCCeEEEEecCcCCchhHHhhhc
Q 032570 1 MESD-LDLPVMNDAARTLSDFGVPYEIKIL-PP-----HQNCKE--ALSYALSA-KERGIKIIIVGDGVEAHLSGVAAAN 70 (138)
Q Consensus 1 mGS~-SD~~~~~~~~~~L~~~gi~~~~~V~-Sa-----HR~p~~--~~~~~~~~-~~~~~~viIa~AG~~a~L~gvva~~ 70 (138)
+||. ......+++.+.|++++.. +-+. +- ...|+. +..|+.+. --..+++||.=+|... -.=|..
T Consensus 245 ~Gs~~~~~~~~~~~~~al~~~~~~--~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l~~~d~~v~~~G~~t---~~Ea~~ 319 (415)
T 1iir_A 245 FGSLGAPADAVRVAIDAIRAHGRR--VILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIHHGGAGT---THVAAR 319 (415)
T ss_dssp CC---CCHHHHHHHHHHHHHTTCC--EEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEECCCHHH---HHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHCCCe--EEEEeCCCcccccCCCCCEEEeCcCChHHHHhhCCEEEeCCChhH---HHHHHH
Confidence 3665 4677788888888888754 2222 11 011211 00111000 0145899998666422 222234
Q ss_pred cCCcEEEecCCCCCCCchh-hhhhhcCCCCCeeeEEecC-CchhHHHHHHHHHccCCHHHHHHHHHHHh
Q 032570 71 SQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYVE 137 (138)
Q Consensus 71 t~~PVIgvP~~~~~~~G~d-LlS~lqmP~GvpvatV~I~-~~~nAA~~AaqIl~~~~~~l~~kl~~~~~ 137 (138)
.-+|+|.+|.... ..... .+.- .|..+ + ++ +..+..-++..|..+.|++.+++.++.++
T Consensus 320 ~G~P~i~~p~~~d-Q~~na~~l~~----~g~g~--~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 380 (415)
T 1iir_A 320 AGAPQILLPQMAD-QPYYAGRVAE----LGVGV--A-HDGPIPTFDSLSAALATALTPETHARATAVAG 380 (415)
T ss_dssp HTCCEEECCCSTT-HHHHHHHHHH----HTSEE--E-CSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred cCCCEEECCCCCc-cHHHHHHHHH----CCCcc--c-CCcCCCCHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 6799999998532 22222 2322 24333 2 22 22244445444444477888888776643
No 416
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.75 E-value=1.3e+02 Score=19.50 Aligned_cols=46 Identities=13% Similarity=0.066 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
.|....+.....|+..|-.+.+..++ +.++..+. .+...++++|.-
T Consensus 28 d~~~~~~~l~~~L~~~~~~~~v~~~~---~~~~al~~---l~~~~~dlii~D 73 (150)
T 4e7p_A 28 DQSMLRDAMCQLLTLQPDVESVLQAK---NGQEAIQL---LEKESVDIAILD 73 (150)
T ss_dssp SCHHHHHHHHHHHHTSTTEEEEEEES---SHHHHHHH---HTTSCCSEEEEC
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEEC---CHHHHHHH---hhccCCCEEEEe
Confidence 45666667777777666444444432 23333333 334456766654
No 417
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=26.73 E-value=1.4e+02 Score=19.65 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
.|....+.....|++.|. ++..+ .+.++..+.+ +...++++|.=..
T Consensus 15 d~~~~~~~l~~~L~~~g~--~v~~~---~~~~~al~~l---~~~~~dlii~D~~ 60 (154)
T 3gt7_A 15 DSPTQAEHLKHILEETGY--QTEHV---RNGREAVRFL---SLTRPDLIISDVL 60 (154)
T ss_dssp SCHHHHHHHHHHHHTTTC--EEEEE---SSHHHHHHHH---TTCCCSEEEEESC
T ss_pred CCHHHHHHHHHHHHHCCC--EEEEe---CCHHHHHHHH---HhCCCCEEEEeCC
Confidence 467777888888888874 44443 2445554443 3456787777543
No 418
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=26.62 E-value=37 Score=26.04 Aligned_cols=30 Identities=23% Similarity=0.139 Sum_probs=21.4
Q ss_pred CCeEEEEecCcCCchhHHhhhccCCcEEEecCCC
Q 032570 49 GIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 82 (138)
Q Consensus 49 ~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~ 82 (138)
..+++|+...+..|| |+....|+|++--.+
T Consensus 261 ~a~l~I~~Dsg~~Hl----Aaa~g~P~v~lfg~t 290 (348)
T 1psw_A 261 ACKAIVTNDSGLMHV----AAALNRPLVALYGPS 290 (348)
T ss_dssp TSSEEEEESSHHHHH----HHHTTCCEEEEESSS
T ss_pred hCCEEEecCCHHHHH----HHHcCCCEEEEECCC
Confidence 478888886666676 445789999885543
No 419
>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5
Probab=26.59 E-value=38 Score=24.08 Aligned_cols=27 Identities=0% Similarity=-0.198 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQN 34 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~ 34 (138)
-+.++++.-.|++.|++|+..... |+.
T Consensus 11 ~~~~~~v~~~l~~~gi~~e~~~~~-~~~ 37 (219)
T 1nhy_A 11 RIRTWVPRGLVKALKLDVKVVTPD-AAA 37 (219)
T ss_dssp SHHHHHHHHHHHHHTCCCEEECGG-GCH
T ss_pred CCChHHHHHHHHHcCCCceeeccc-CCC
Confidence 478899999999999999987665 443
No 420
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=26.58 E-value=1.2e+02 Score=25.73 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHhCCC----------------e---EE-EEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 5 LDLPVMNDAARTLSDFGVP----------------Y---EI-KILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~----------------~---~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
-|+.-+.+-...|+++|+. | +. .|-+-.-+++.+.++++.+.++|++||+=
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 112 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMID 112 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3565555555788999984 1 22 46666678899999999999999999864
No 421
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=26.57 E-value=1.7e+02 Score=21.27 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILP 30 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~S 30 (138)
.+..++...|.+.||++|+-.-+
T Consensus 29 G~~a~If~~La~~~I~vd~I~q~ 51 (181)
T 3s1t_A 29 GYAAKVFRAVADADVNIDMVLQN 51 (181)
T ss_dssp THHHHHHHHHHHTTCCCCCEEEC
T ss_pred CHHHHHHHHHHHcCCcEEEEEec
Confidence 35788999999999998876643
No 422
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.44 E-value=72 Score=26.37 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCC-------C-chHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR-------~-p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
|....+++.+.|+++|....+.=. +.+ + -+|..++-+-+.+..+++|+++-|+.+.
T Consensus 59 ~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga 122 (371)
T 3tla_A 59 AKNRFFRGVEFLQRKGFKLVSGKL-TGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNS 122 (371)
T ss_dssp THHHHHHHHHHHHHTTCEEEECTT-TTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 557788999999999986443210 111 1 2466666666677789999999998664
No 423
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=26.39 E-value=1.7e+02 Score=24.73 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=27.7
Q ss_pred CCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEec
Q 032570 21 GVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 21 gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
.+| .-+++. +.-+.+++.++++.+++.|++-||+..
T Consensus 268 ~~P~V~VKi~-pd~~~~~i~~iA~~a~~aGaDgIiv~N 304 (415)
T 3i65_A 268 KKPLVFVKLA-PDLNQEQKKEIADVLLETNIDGMIISN 304 (415)
T ss_dssp SCCEEEEEEC-SCCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCeEEEEec-CCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 578 788886 444556788899888888999888764
No 424
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=26.35 E-value=1.3e+02 Score=24.69 Aligned_cols=58 Identities=21% Similarity=0.170 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHhCCCe-----------------E-EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchh
Q 032570 5 LDLPVMNDAARTLSDFGVPY-----------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 64 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~-----------------~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~ 64 (138)
-|+.-+.+-...|+++||.. + ..|-+-.-+++.+.++++.+.++|.+||+=+ --||.+
T Consensus 33 Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~--V~NH~s 108 (424)
T 2dh2_A 33 GNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDL--TPNYRG 108 (424)
T ss_dssp CSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEC--CTTTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE--CCCcCC
Confidence 36666666667888999951 1 3566666788999999999999999998753 245543
No 425
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=26.30 E-value=1.9e+02 Score=21.17 Aligned_cols=58 Identities=17% Similarity=0.322 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHhhh--cCCeEEEEecCcCCch
Q 032570 6 DLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHL 63 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~--------------------~~V~SaHR~p~~~~~~~~~~~~--~~~~viIa~AG~~a~L 63 (138)
-...+++.+..|.++|+++. +-+.|.-+...++.+.++.+++ +|+++|..-.-..+-|
T Consensus 70 S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~L 149 (220)
T 3etn_A 70 AGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPL 149 (220)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChh
Confidence 35678888888888888632 4566666777778888888877 7777654433333333
No 426
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=26.09 E-value=74 Score=24.94 Aligned_cols=45 Identities=13% Similarity=0.058 Sum_probs=33.5
Q ss_pred HHHHHHhhh--cCCeEEEEecCcCCchhHHhhhccCC----cEEEecCCCC
Q 032570 39 LSYALSAKE--RGIKIIIVGDGVEAHLSGVAAANSQI----LVIRVPLLSE 83 (138)
Q Consensus 39 ~~~~~~~~~--~~~~viIa~AG~~a~L~gvva~~t~~----PVIgvP~~~~ 83 (138)
.|+.++... ..++.|++..|.-+.+.|+..+.-.. .||+|.+..+
T Consensus 177 ~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~~vigve~~~~ 227 (338)
T 1tzj_A 177 EEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAK 227 (338)
T ss_dssp HHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGGGEEEEECSSC
T ss_pred HHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCCeEEEEEccCc
Confidence 455555532 35899999999999999998775433 7999998764
No 427
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5
Probab=26.02 E-value=74 Score=22.77 Aligned_cols=26 Identities=15% Similarity=0.006 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQ 33 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR 33 (138)
+.++++.-.|++.|++||........
T Consensus 15 ~~~~~vr~~L~~~gi~ye~~~v~~~~ 40 (224)
T 3gtu_B 15 GLAHAIRLLLEFTDTSYEEKRYTCGE 40 (224)
T ss_dssp GGGHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cchHHHHHHHHHcCCCceEEEeecCC
Confidence 56789999999999999988877543
No 428
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=25.97 E-value=39 Score=25.96 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=36.4
Q ss_pred EEEccC---CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhh----------hccCCcEEEecCC
Q 032570 27 KILPPH---QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA----------ANSQILVIRVPLL 81 (138)
Q Consensus 27 ~V~SaH---R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva----------~~t~~PVIgvP~~ 81 (138)
-|.|.| ++|+++.++.+++.+-|+++ +=+|.++....-++. .....|+|+..+.
T Consensus 116 vI~S~Hdf~~tp~el~~~~~~~~~~gaDi-vKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG 182 (231)
T 2ocz_A 116 LILSYHNFEETPENLMEAFSEMTKLAPRV-VKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATISMG 182 (231)
T ss_dssp EEEEEEESSCCCTTHHHHHHHHHHTCCSE-EEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEECH
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHcCCCE-EEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEEEEcC
Confidence 577888 89988888888888878774 344555554333321 1346799998774
No 429
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=25.82 E-value=1.7e+02 Score=22.40 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccC---CCc----------------hHHHHHHHHhhhcCCeEEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPH---QNC----------------KEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaH---R~p----------------~~~~~~~~~~~~~~~~viIa~ 56 (138)
.+.+++-.+.++++|++ -+|+...+ ..| +.+.++++.+.+.|..|++..
T Consensus 44 ~~~~~~d~~~~k~~G~N-~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 44 KSTFESTLSDMQSHGGN-SVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHcCCC-EEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 56778888888999998 45653111 112 367788888889999999976
No 430
>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}
Probab=25.63 E-value=89 Score=23.49 Aligned_cols=31 Identities=10% Similarity=-0.069 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc-CCCchHH
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP-HQNCKEA 38 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa-HR~p~~~ 38 (138)
|.++++.-.|++.||+||..-... ++.|+.+
T Consensus 16 P~~~rv~i~L~e~gi~ye~~~vd~~~~~pe~~ 47 (265)
T 4g10_A 16 PFSERVEIMLELKGLRMKDVEIDISKPRPDWL 47 (265)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCCHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEeCCCCCCcHHH
Confidence 789999999999999999766553 4455543
No 431
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.60 E-value=1.6e+02 Score=21.56 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
+.+..+++.+..+++|.++-+ + |-..+.+.++.+.+++.|+++.+
T Consensus 87 ~~~~~~~~i~~A~~lGa~~v~-~---~p~~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIV-G---VPNYELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEE-E---EECGGGHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEE-e---cCCHHHHHHHHHHHHHcCCEEEE
Confidence 567888999999999998644 3 32346677777777777776544
No 432
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=25.59 E-value=72 Score=25.95 Aligned_cols=44 Identities=11% Similarity=-0.025 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
.+.++..|...|. . |...|+.++.+.+++ +.++++|++.|...-
T Consensus 178 G~p~A~lL~~~gA--t--Vtv~hs~t~~L~~~~-----~~ADIVI~Avg~p~~ 221 (301)
T 1a4i_A 178 GAPMHDLLLWNNA--T--VTTCHSKTAHLDEEV-----NKGDILVVATGQPEM 221 (301)
T ss_dssp HHHHHHHHHHTTC--E--EEEECTTCSSHHHHH-----TTCSEEEECCCCTTC
T ss_pred HHHHHHHHHhCCC--e--EEEEECCcccHHHHh-----ccCCEEEECCCCccc
Confidence 3445555555553 3 444589888888876 358999999998553
No 433
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=25.50 E-value=33 Score=18.20 Aligned_cols=12 Identities=58% Similarity=0.803 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHh
Q 032570 126 EDLLERIRKYVE 137 (138)
Q Consensus 126 ~~l~~kl~~~~~ 137 (138)
+++++|||+.|+
T Consensus 11 edlqerlrklrk 22 (27)
T 3twe_A 11 EDLQERLRKLRK 22 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 467788888775
No 434
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=25.32 E-value=63 Score=25.39 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=33.4
Q ss_pred HHHHHHhhhcCCeEEEEecCcCCchhHHhhhc----cCCcEEEecCCCCC
Q 032570 39 LSYALSAKERGIKIIIVGDGVEAHLSGVAAAN----SQILVIRVPLLSED 84 (138)
Q Consensus 39 ~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~----t~~PVIgvP~~~~~ 84 (138)
.|+.++.. ..++.|++..|.-+.+.|+..+. ....||+|.+..++
T Consensus 172 ~Ei~~q~~-~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~ 220 (325)
T 1j0a_A 172 GEIATQSE-VKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFG 220 (325)
T ss_dssp HHHHHHCC-CCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCS
T ss_pred HHHHHhhC-CCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCch
Confidence 34444432 25899999999999999998875 35689999987653
No 435
>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A
Probab=25.23 E-value=49 Score=23.94 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc--CCCc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP--HQNC 35 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa--HR~p 35 (138)
+.++++.-.|++.|++||...... |+.|
T Consensus 33 ~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~ 62 (230)
T 2ycd_A 33 ARDMPVRWALEEVGQPYHVRRLSFEAMKEA 62 (230)
T ss_dssp STHHHHHHHHHHHTCCCEEEEECHHHHTST
T ss_pred CccHHHHHHHHHcCCCceEEEeCccccCCH
Confidence 568899999999999999877765 4444
No 436
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=24.96 E-value=97 Score=23.56 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=44.3
Q ss_pred HHHHHHHHh----CCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEEecCcCCchhHH-hhhccCCcEEEe
Q 032570 12 DAARTLSDF----GVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGV-AAANSQILVIRV 78 (138)
Q Consensus 12 ~~~~~L~~~----gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa~AG~~a~L~gv-va~~t~~PVIgv 78 (138)
-+...++++ |.++++.+.--...|++..+.+++...+ +++.||...+.+..++-. ++....+|+|..
T Consensus 39 g~~~a~~~in~i~G~~i~l~~~D~~~~~~~~~~~~~~l~~~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~ 111 (366)
T 3td9_A 39 GIQIAHEEKPTVLGEEVELVLLDTRSEKTEAANAAARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVTP 111 (366)
T ss_dssp HHHHHHHHCCEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEEECSSHHHHHHHHHHHHHTTCCEEES
T ss_pred HHHHHHHHhhhcCCeEEEEEEecCCCCHHHHHHHHHHHhccCCeEEEEccCCchhHHHHHHHHHhCCCeEEec
Confidence 344444554 4568888988889999988888877655 488888655443332211 234568899974
No 437
>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}
Probab=24.81 E-value=49 Score=23.17 Aligned_cols=25 Identities=16% Similarity=0.016 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPH 32 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaH 32 (138)
+.++++.-.|++.|++|+.......
T Consensus 13 ~~~~~v~~~L~~~gi~~e~~~v~~~ 37 (204)
T 2ws2_A 13 GAAEIIRQVFVLAGQDYEDVRLTHE 37 (204)
T ss_dssp GGGHHHHHHHHHTTCCCEEEEECTT
T ss_pred chHHHHHHHHHHcCCCceEEEecHh
Confidence 5788999999999999998877643
No 438
>2z0x_A Putative uncharacterized protein TTHA1699; protein-cyssa complex, translation, structural genomics, NPPSFA; HET: 5CA; 1.64A {Thermus thermophilus} PDB: 2z0k_A* 2cx5_A* 3rij_A 3ri0_A
Probab=24.78 E-value=67 Score=22.51 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhCCCe-EEEEEcc-CCCchHHHHHHHHhhhcCCeEEEE
Q 032570 10 MNDAARTLSDFGVPY-EIKILPP-HQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~-~~~V~Sa-HR~p~~~~~~~~~~~~~~~~viIa 55 (138)
.+++.+.|++.||+| +..-... -++-+++.+++.-...+-+|-++.
T Consensus 7 ~~~~~~~L~~~~i~~~~~~~~p~~~~t~~e~a~~lg~~~~~~~Ktlv~ 54 (158)
T 2z0x_A 7 ARRVQGALETRGFGHLKVVELPASTRTAKEAAQAVGAEVGQIVKSLVF 54 (158)
T ss_dssp HHHHHHHHHHTTCTTSCEEECSSCCSSHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHcCCCCCEEEEcCCCCCCHHHHHHHcCCCHHHEEEEEEE
Confidence 378999999999999 8765542 355566655553223334554444
No 439
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=24.75 E-value=2.6e+02 Score=22.12 Aligned_cols=40 Identities=18% Similarity=0.390 Sum_probs=30.1
Q ss_pred hCCCeEEEEEccC-----CCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 20 FGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 20 ~gi~~~~~V~SaH-----R~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
..++.-+|+..-. -+++...++++..++.|++.|-+..|.
T Consensus 208 v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 208 WDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp CCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred cCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 4788888887632 346678888888888899988887764
No 440
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=24.56 E-value=2e+02 Score=23.09 Aligned_cols=49 Identities=10% Similarity=-0.001 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa 55 (138)
.-+++--.+.++++|+.++..-....-+.+++.+.+++..+ ..++=|++
T Consensus 47 ~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D~~v~GIlv 96 (281)
T 2c2x_A 47 QAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIV 96 (281)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEEE
Confidence 44667778889999999999999999899999999988854 34555555
No 441
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=24.42 E-value=90 Score=25.22 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCC-------Cc-hHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQ-------NC-KEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR-------~p-~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
|....+++.+.|+++|....+.=. +.+ ++ +|..++.+-+.+..+++|+++-|+.+.
T Consensus 28 ~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 28 STENRRLAVKRLTELGFHVTFSTH-AEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNS 91 (331)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 477889999999999986543210 111 12 466666666677789999999998654
No 442
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=24.41 E-value=29 Score=27.53 Aligned_cols=47 Identities=13% Similarity=0.082 Sum_probs=21.3
Q ss_pred CCCchHHHHHHHHhh-hcCCeEEEEecCcCCchhHHhhhccCCcEEEe
Q 032570 32 HQNCKEALSYALSAK-ERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 78 (138)
Q Consensus 32 HR~p~~~~~~~~~~~-~~~~~viIa~AG~~a~L~gvva~~t~~PVIgv 78 (138)
|.+|+-..++.+++. ....+|+|++||.++-......+..-..|.-+
T Consensus 8 ~~~~~~~~~~~~~M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~ 55 (398)
T 2xdo_A 8 HHHSSGLVPRGSHMNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVY 55 (398)
T ss_dssp ---------------CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred cccccCcccCcccccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 566777777776654 24579999999987765555555555556544
No 443
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=24.41 E-value=2e+02 Score=24.13 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=35.9
Q ss_pred CH-HHHHHHHHHHHHhCCCeEEEEE-----------------------------ccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 6 DL-PVMNDAARTLSDFGVPYEIKIL-----------------------------PPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 6 D~-~~~~~~~~~L~~~gi~~~~~V~-----------------------------SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|+ .-+.+-...|+++|+.+ +.+. +-.-+.++++++++.+.++|++||+=
T Consensus 34 d~~~gi~~~LdyLk~LGvt~-IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD 112 (527)
T 1gcy_A 34 DWYNILRQQAATIAADGFSA-IWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYD 112 (527)
T ss_dssp THHHHHHHHHHHHHHTTCSE-EEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHhcCCCE-EEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 56 77777778999999962 2222 22235678999999999999999874
No 444
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.36 E-value=1.1e+02 Score=25.19 Aligned_cols=51 Identities=24% Similarity=0.206 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHhCCCe-------------------E-EEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVPY-------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~-------------------~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
|+.=+.+=...|++|||.. + ..|-+-.=+++.++++++.+.++|.+||+=+
T Consensus 30 dl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 30 DLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp CHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4544444456889999951 1 2455555678899999999999999998743
No 445
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=24.33 E-value=1.3e+02 Score=24.10 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=48.2
Q ss_pred HHHhCCCeEEEEEc--cC--CCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEE
Q 032570 17 LSDFGVPYEIKILP--PH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIR 77 (138)
Q Consensus 17 L~~~gi~~~~~V~S--aH--R~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIg 77 (138)
+++||+.. +.+.+ .. -+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||.+
T Consensus 218 a~~yGL~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~iA~e~g~~v~~ 281 (321)
T 1xvl_A 218 ARDYGMEE-IYMWPINAEQQFTPKQVQTVIEEVKTNNVPTIFCESTVSDKGQKQVAQATGARFGG 281 (321)
T ss_dssp HHHTTCEE-EEEESSSSSCSCCHHHHHHHHHHHHTTTCSEEEEETTSCSHHHHHHHTTTCCEEEE
T ss_pred HHHCCCeE-EEeeccCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCChHHHHHHHHhcCCceee
Confidence 35688863 33432 23 567899999999999999999999999999999999999999975
No 446
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=24.19 E-value=1.3e+02 Score=26.30 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=36.0
Q ss_pred CHHHHHHHHH--HHHHhCCC-------eE------------------------EEEEccCCCchHHHHHHHHhhhcCCeE
Q 032570 6 DLPVMNDAAR--TLSDFGVP-------YE------------------------IKILPPHQNCKEALSYALSAKERGIKI 52 (138)
Q Consensus 6 D~~~~~~~~~--~L~~~gi~-------~~------------------------~~V~SaHR~p~~~~~~~~~~~~~~~~v 52 (138)
|+.-+.+-.. .|+++|+. ++ ..|-+-.-+.++++++++.+.++|++|
T Consensus 53 dl~gi~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~V 132 (686)
T 1d3c_A 53 DWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKV 132 (686)
T ss_dssp CHHHHHHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEE
Confidence 5655555556 78899985 22 234444457889999999999999999
Q ss_pred EEE
Q 032570 53 IIV 55 (138)
Q Consensus 53 iIa 55 (138)
|+=
T Consensus 133 ilD 135 (686)
T 1d3c_A 133 IID 135 (686)
T ss_dssp EEE
T ss_pred EEE
Confidence 873
No 447
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=24.15 E-value=1.6e+02 Score=25.15 Aligned_cols=49 Identities=27% Similarity=0.377 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHhCCCe---------------E----EEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 6 DLPVMNDAARTLSDFGVPY---------------E----IKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~---------------~----~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
|+.-+.+-...|+++|+.. + ..|-+-.-+++.+.++++.+.++|.+||+
T Consensus 170 d~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 5544444458899999962 1 13333444789999999999999999987
No 448
>4gf0_A Glutathione S-transferase; GST, enzyme function initiative, EFI, structural genomics; HET: GSH; 1.75A {Sulfitobacter}
Probab=24.13 E-value=81 Score=22.40 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 032570 10 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 42 (138)
Q Consensus 10 ~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~ 42 (138)
..++.-.|++.|++||..-...-...++..+|.
T Consensus 14 s~~vr~~L~e~gl~ye~~~v~~~~~~~~~~~~l 46 (215)
T 4gf0_A 14 SVAVAIAIEEAALPYQPVRVDFATAEQTKPDYL 46 (215)
T ss_dssp HHHHHHHHHHTTCCEEEEECCGGGTGGGSHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCccCCHHHH
Confidence 467888999999999987766543333344554
No 449
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.12 E-value=1.9e+02 Score=20.29 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=33.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhh-hcCCeEEEE
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIV 55 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~-~~~~~viIa 55 (138)
+.|.+..++-+++.++-|.. +| --|+|+++.+-+++.- +..+.++++
T Consensus 9 stdeetlrkfkdiikkngfk--vr---tvrspqelkdsieelvkkynativvv 56 (134)
T 2l69_A 9 STDEETLRKFKDIIKKNGFK--VR---TVRSPQELKDSIEELVKKYNATIVVV 56 (134)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EE---EECSHHHHHHHHHHHTTCCCCEEEEE
T ss_pred eCCHHHHHHHHHHHHhcCce--EE---EecCHHHHHHHHHHHHHHhCCeEEEE
Confidence 46889999999999998874 33 2488999988777663 334444433
No 450
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=24.05 E-value=1.4e+02 Score=18.89 Aligned_cols=70 Identities=14% Similarity=0.082 Sum_probs=40.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCC--ch--hHHhh---hccCCcEE
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HL--SGVAA---ANSQILVI 76 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a--~L--~gvva---~~t~~PVI 76 (138)
+.|....+.....|+..|. ++..+ .+.++..+.+ ....++++|.-..+.. ++ ---+- .....|||
T Consensus 14 dd~~~~~~~l~~~L~~~g~--~v~~~---~~~~~a~~~l---~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii 85 (142)
T 3cg4_A 14 DDDAHVRIAVKTILSDAGF--HIISA---DSGGQCIDLL---KKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIV 85 (142)
T ss_dssp CSCHHHHHHHHHHHHHTTC--EEEEE---SSHHHHHHHH---HTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEE
T ss_pred cCCHHHHHHHHHHHHHCCe--EEEEe---CCHHHHHHHH---HhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEE
Confidence 3577788888999999875 44333 2344444444 3456898888665532 11 11222 23457888
Q ss_pred EecCC
Q 032570 77 RVPLL 81 (138)
Q Consensus 77 gvP~~ 81 (138)
.+-..
T Consensus 86 ~~s~~ 90 (142)
T 3cg4_A 86 MLTAK 90 (142)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 76543
No 451
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=24.04 E-value=53 Score=26.86 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=33.2
Q ss_pred EEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEecCC
Q 032570 27 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 81 (138)
Q Consensus 27 ~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~ 81 (138)
.|...|+.+..+.++.+ .++++|+++|...-+.+=.- ..-.=||-|=+.
T Consensus 205 TVTi~Hs~T~dl~~~~~-----~ADIvV~A~G~p~~i~~d~v-k~GavVIDVGin 253 (303)
T 4b4u_A 205 TVTICHSRTQNLPELVK-----QADIIVGAVGKAELIQKDWI-KQGAVVVDAGFH 253 (303)
T ss_dssp EEEEECTTCSSHHHHHH-----TCSEEEECSCSTTCBCGGGS-CTTCEEEECCCB
T ss_pred EEEEecCCCCCHHHHhh-----cCCeEEeccCCCCccccccc-cCCCEEEEecee
Confidence 56667999999988875 47999999999776554221 122237766554
No 452
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=24.04 E-value=1.4e+02 Score=22.80 Aligned_cols=49 Identities=8% Similarity=0.026 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh-------------c-CCeEEEEecCcCC
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------R-GIKIIIVGDGVEA 61 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~-------------~-~~~viIa~AG~~a 61 (138)
..+.+...|.+.| +++.|. .|++++..++.+.... . +++++|..++...
T Consensus 130 ~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 130 ATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp HHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred HHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 4455666777788 566664 7999998888765421 2 5677877776543
No 453
>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*
Probab=23.96 E-value=39 Score=24.44 Aligned_cols=29 Identities=10% Similarity=0.157 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQN 34 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~ 34 (138)
.-+.++++.-.|++.|++|+.........
T Consensus 10 ~sp~~~~vr~~L~~~gi~ye~~~v~~~~~ 38 (226)
T 3tou_A 10 ASPYTRKVRVVLAEKKIDYQFVLEDVWNA 38 (226)
T ss_dssp SCHHHHHHHHHHHHTTCCCEEEECCTTST
T ss_pred CCchHHHHHHHHHHcCCCcEEEecCccCC
Confidence 34788999999999999999877665443
No 454
>2z84_A UFSP1, UFM1-specific protease 1; alpha/beta, papain like fold, hydrolase, thiol protease, UBL conjugation pathway; 1.70A {Mus musculus}
Probab=23.84 E-value=1.2e+02 Score=23.62 Aligned_cols=45 Identities=13% Similarity=-0.061 Sum_probs=30.4
Q ss_pred HHHHHHHHH-hCCCeEEEEE-ccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 11 NDAARTLSD-FGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 11 ~~~~~~L~~-~gi~~~~~V~-SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
-|+...|+. |||+|++.-. +.--.++.+.++.+.++..+..|+|-
T Consensus 97 ~E~~~~l~sllgI~cki~~~~~g~~~~~~~~~l~~hF~~~g~PI~ig 143 (218)
T 2z84_A 97 VEASLCLEHFGGPQGRLCHLPRGVGLRGEEERLYSHFTTGGGPVMVG 143 (218)
T ss_dssp HHHHHHHHHTTCSEEEEEEECSCSTTTTCHHHHHHHHHTTCCCEEEC
T ss_pred HHHHHHHHhhcCCceEEEEccCchhHHHHHHHHHHHHhcCCCCEEEC
Confidence 467778887 9999886443 33334556666667777777767665
No 455
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=23.81 E-value=1.3e+02 Score=21.05 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCC------CchHHHHHHHHhhh--------cCCeEEEEecCcCC---chhHHh
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQ------NCKEALSYALSAKE--------RGIKIIIVGDGVEA---HLSGVA 67 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR------~p~~~~~~~~~~~~--------~~~~viIa~AG~~a---~L~gvv 67 (138)
....++.+..+.|.+.||++|+-..|.++ ..+++.+++++.+. +-..|=|++.||.+ ..+-+.
T Consensus 30 ~~~g~~~~if~~La~~~I~vd~I~~s~~~Isf~v~~~~~~~~il~~l~~~~~v~~~~~~a~vsvvG~gm~~~~gv~a~~f 109 (157)
T 3mah_A 30 LSWHFMRKLFEIFEFYQEPVDMVATSEVGVSLTIDNDKNLPDIVRALSDIGDVTVDKDMVIICIVGDMEWDNVGFEARII 109 (157)
T ss_dssp CHHHHHHHHHHHHHHTTCCCSCEECCSSEEEEEESCCTTHHHHHHHHTTTEEEEEEEEEEEEEEEC------CCHHHHHH
T ss_pred CchhHHHHHHHHHHHcCCCEEEEEecCCEEEEEECChHHHHHHHHHHhccCeEEEeCCeEEEEEECCCcccCccHHHHHH
Confidence 34467889999999999998765555442 22346666655431 11234455666653 333444
Q ss_pred hhccCCcEEE
Q 032570 68 AANSQILVIR 77 (138)
Q Consensus 68 a~~t~~PVIg 77 (138)
.++...||..
T Consensus 110 ~aL~~Ini~~ 119 (157)
T 3mah_A 110 NALKGVPVRM 119 (157)
T ss_dssp HTTTTSCCSE
T ss_pred HHhCCCCeEE
Confidence 4444444433
No 456
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=23.77 E-value=67 Score=24.65 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=41.8
Q ss_pred CCeEEEEecCcCCchhHHhhhccCCcEEEecCCCCCCCchh-hhhhhcCCCCCeeeEEecCCchhHHHHHHHHHcc-CCH
Q 032570 49 GIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI-ADE 126 (138)
Q Consensus 49 ~~~viIa~AG~~a~L~gvva~~t~~PVIgvP~~~~~~~G~d-LlS~lqmP~GvpvatV~I~~~~nAA~~AaqIl~~-~~~ 126 (138)
.++++|.-+|...- .=+...-+|+|.+|....+..+.. .+.- .|..+ +.-.+..++..++..|..+ .|+
T Consensus 297 ~ad~~v~~~G~~t~---~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~----~g~g~--~~~~~~~~~~~l~~~~~~ll~~~ 367 (402)
T 3ia7_A 297 HARACLTHGTTGAV---LEAFAAGVPLVLVPHFATEAAPSAERVIE----LGLGS--VLRPDQLEPASIREAVERLAADS 367 (402)
T ss_dssp TEEEEEECCCHHHH---HHHHHTTCCEEECGGGCGGGHHHHHHHHH----TTSEE--ECCGGGCSHHHHHHHHHHHHHCH
T ss_pred hCCEEEECCCHHHH---HHHHHhCCCEEEeCCCcccHHHHHHHHHH----cCCEE--EccCCCCCHHHHHHHHHHHHcCH
Confidence 47888887764222 223346789999998322222222 3322 24332 2211222455555544443 578
Q ss_pred HHHHHHHHHHh
Q 032570 127 DLLERIRKYVE 137 (138)
Q Consensus 127 ~l~~kl~~~~~ 137 (138)
+.++++++.++
T Consensus 368 ~~~~~~~~~~~ 378 (402)
T 3ia7_A 368 AVRERVRRMQR 378 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887766543
No 457
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.62 E-value=1.8e+02 Score=24.88 Aligned_cols=50 Identities=20% Similarity=0.336 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------E-EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 6 DLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~------------------~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|+.-+.+-...|+++|+.. + ..|-+-.-+++++.++++.+.++|.+||+=
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 242 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLD 242 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5554444458899999951 1 356666678899999999999999999874
No 458
>2epi_A UPF0045 protein MJ1052; NPPSFA, national project on protein structural and functiona analyses; 1.70A {Methanocaldococcus jannaschii} PDB: 2eky_A
Probab=23.57 E-value=63 Score=21.85 Aligned_cols=40 Identities=13% Similarity=0.089 Sum_probs=30.3
Q ss_pred CcCCHHHHHHHHHHHHHhCCCeEEE-----EEccCCCchHHHHHHHHh
Q 032570 3 SDLDLPVMNDAARTLSDFGVPYEIK-----ILPPHQNCKEALSYALSA 45 (138)
Q Consensus 3 S~SD~~~~~~~~~~L~~~gi~~~~~-----V~SaHR~p~~~~~~~~~~ 45 (138)
+.|=.+++.++.+.|++-|++|+++ |-+ ..+++.+.++++
T Consensus 19 ~~svs~~Va~~i~~l~~sGl~y~~~pm~T~IEG---e~devm~vv~~~ 63 (100)
T 2epi_A 19 GASVSKYVKKAIEVFKKYDLKVETNAMGTVLEG---DLDEILKAFKEA 63 (100)
T ss_dssp SSCCHHHHHHHHHHHTTSSCEEEEETTEEEEEE---EHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCeEecCCccEEEc---CHHHHHHHHHHH
Confidence 4577788999999999999998752 332 357888877665
No 459
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.54 E-value=1.4e+02 Score=18.59 Aligned_cols=48 Identities=13% Similarity=0.150 Sum_probs=30.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
+.|....+.....|++.|. ++..+ .+.++..+.++ ...++++|.-..+
T Consensus 10 dd~~~~~~~l~~~L~~~g~--~v~~~---~~~~~a~~~l~---~~~~dlii~D~~l 57 (127)
T 3i42_A 10 EDYQAAAETFKELLEMLGF--QADYV---MSGTDALHAMS---TRGYDAVFIDLNL 57 (127)
T ss_dssp CSCHHHHHHHHHHHHHTTE--EEEEE---SSHHHHHHHHH---HSCCSEEEEESBC
T ss_pred cCCHHHHHHHHHHHHHcCC--CEEEE---CCHHHHHHHHH---hcCCCEEEEeCCC
Confidence 3567778888889998875 44443 24455555443 4568888875543
No 460
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=23.53 E-value=1.2e+02 Score=26.17 Aligned_cols=51 Identities=20% Similarity=0.323 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHhCCC---------------eE----EEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVP---------------YE----IKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~---------------~~----~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
|+.=+.+=-..|++|||. |+ ..|-+-.=+++.+.++++.+.++|.+||+=+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 444444445788999995 21 2566667789999999999999999998743
No 461
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=23.41 E-value=1.7e+02 Score=24.88 Aligned_cols=50 Identities=30% Similarity=0.357 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------E-EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 6 DLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~------------------~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|+.-+.+-...|+++|+.. + ..|-+-.-+++++.++++.+.++|++||+=
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD 239 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 239 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5544444458899999951 1 356666678999999999999999999874
No 462
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=23.41 E-value=2.2e+02 Score=21.62 Aligned_cols=70 Identities=21% Similarity=0.287 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhHH-hhhccCCcEEEe
Q 032570 9 VMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGV-AAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~~-----gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~gv-va~~t~~PVIgv 78 (138)
..+-+...++++ |.++++.+.--.-.|++..+.+++... ++++.||...+.+..++-. ++.....|+|..
T Consensus 25 ~~~g~~~A~~~~~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~ 101 (375)
T 3i09_A 25 GLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINI 101 (375)
T ss_dssp HHHHHHHHHHHHTSEETTEEEEEEEEECTTCHHHHHHHHHHHHHHSCEEEEEECSCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCeEEEEEEecCCCCHHHHHHHHHHHHhhCCCEEEECCCCcHHHHHHHHHHHHcCceEEEe
Confidence 344444455665 456888888888889999888888755 7788887654443333221 223467899975
No 463
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=23.34 E-value=2.6e+02 Score=21.59 Aligned_cols=112 Identities=12% Similarity=0.193 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchH---------------HHHHHHHhhhcCCeEEEEecCcCCchhHHhhhc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKE---------------ALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 70 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~---------------~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~ 70 (138)
.....+++.+.|+++++ ++-+..-....+. ..+++ ..+++||.=+|... -.=|..
T Consensus 248 ~~~~~~~~~~~l~~~~~--~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll-----~~ad~~v~~~G~~t---~~Eal~ 317 (398)
T 3oti_A 248 GIGAVEPIIAAAGEVDA--DFVLALGDLDISPLGTLPRNVRAVGWTPLHTLL-----RTCTAVVHHGGGGT---VMTAID 317 (398)
T ss_dssp CGGGHHHHHHHHHTSSS--EEEEECTTSCCGGGCSCCTTEEEESSCCHHHHH-----TTCSEEEECCCHHH---HHHHHH
T ss_pred cHHHHHHHHHHHHcCCC--EEEEEECCcChhhhccCCCcEEEEccCCHHHHH-----hhCCEEEECCCHHH---HHHHHH
Confidence 44567777888877754 4433322221111 22222 23789987555422 122334
Q ss_pred cCCcEEEecCCCCCCCch--hhhhhhcCCCCCeeeEEecC-CchhHHHHHHHHHccCCHHHHHHHHHHHh
Q 032570 71 SQILVIRVPLLSEDWSED--DVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYVE 137 (138)
Q Consensus 71 t~~PVIgvP~~~~~~~G~--dLlS~lqmP~GvpvatV~I~-~~~nAA~~AaqIl~~~~~~l~~kl~~~~~ 137 (138)
.-+|+|.+|.......-- +.+.- .|.++ + ++ +..++..++ ++| .|++.++++++.++
T Consensus 318 ~G~P~v~~p~~~dq~~~a~~~~~~~----~g~g~--~-~~~~~~~~~~l~-~ll--~~~~~~~~~~~~~~ 377 (398)
T 3oti_A 318 AGIPQLLAPDPRDQFQHTAREAVSR----RGIGL--V-STSDKVDADLLR-RLI--GDESLRTAAREVRE 377 (398)
T ss_dssp HTCCEEECCCTTCCSSCTTHHHHHH----HTSEE--E-CCGGGCCHHHHH-HHH--HCHHHHHHHHHHHH
T ss_pred hCCCEEEcCCCchhHHHHHHHHHHH----CCCEE--e-eCCCCCCHHHHH-HHH--cCHHHHHHHHHHHH
Confidence 678999999854322222 32211 24333 2 22 222455555 666 47888888766543
No 464
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=23.17 E-value=1.3e+02 Score=20.92 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=25.5
Q ss_pred HHHHHHHHHH-Hh-CCCeEEEEEccCCCchHHHHH
Q 032570 9 VMNDAARTLS-DF-GVPYEIKILPPHQNCKEALSY 41 (138)
Q Consensus 9 ~~~~~~~~L~-~~-gi~~~~~V~SaHR~p~~~~~~ 41 (138)
..+...+.|+ .+ +-+|++.|+-.+..|+..+.+
T Consensus 28 ai~nL~~i~e~~l~~~~y~LeVIDv~eqPeLAE~~ 62 (105)
T 1t4y_A 28 IVQRVKNILAAVEATVPISLQVINVADQPQLVEYY 62 (105)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEEEETTTCHHHHHHT
T ss_pred HHHHHHHHHHHhccCCceEEEEeecccCHHHHhHc
Confidence 3455566665 45 889999999999999988764
No 465
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=23.06 E-value=1.6e+02 Score=23.54 Aligned_cols=48 Identities=13% Similarity=-0.036 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.++++|+ ++.......-+.+++.+.+++..++ ..+=|++
T Consensus 42 ~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D~~v~GIlv 90 (276)
T 3ngx_A 42 SIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKDPQINGIMI 90 (276)
T ss_dssp HHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCCCCCcEEEE
Confidence 4477778889999999 9999999999999999999887543 4444444
No 466
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=23.00 E-value=2.4e+02 Score=22.80 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=25.1
Q ss_pred CeEEEEEccC--------CCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 23 PYEIKILPPH--------QNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 23 ~~~~~V~SaH--------R~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
+.-+|+..-. .+.+...++++..++.|++.|.+..|.
T Consensus 229 pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 273 (365)
T 2gou_A 229 RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD 273 (365)
T ss_dssp GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 6667766421 134566778888888899988877663
No 467
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=22.93 E-value=93 Score=22.04 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCC
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPPHQN 34 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~SaHR~ 34 (138)
+.+.++...|++.|++|+.........
T Consensus 13 p~~~~v~~~l~~~gi~~~~~~v~~~~~ 39 (218)
T 3ir4_A 13 PFCVKARMIFGLKNIPVELNVLQNDDE 39 (218)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCC
T ss_pred chHHHHHHHHHHcCCceEEEECCCcch
Confidence 689999999999999999887766543
No 468
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=22.90 E-value=2.5e+02 Score=21.35 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhHH-hhhccCCcEEEe
Q 032570 9 VMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGV-AAANSQILVIRV 78 (138)
Q Consensus 9 ~~~~~~~~L~~~-----gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~gv-va~~t~~PVIgv 78 (138)
..+-+...++++ |.++++.+.--.-.|++..+.++++.. ++++.||...+.+..++-. ++.....|+|..
T Consensus 27 ~~~g~~~a~~~i~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~ 103 (379)
T 3n0w_A 27 SVAAVQLAIEDVGGKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFIT 103 (379)
T ss_dssp HHHHHHHHHHHTTTEETTEECEEEEEECTTCHHHHHHHHHHHHHHSCCCEEEECCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHHhCCceEEEcCCCcHHHHHHHHHHHHcCceEEEc
Confidence 344445555665 456888888888899999888887755 7888888765543333321 224568899975
No 469
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=22.37 E-value=1.4e+02 Score=25.29 Aligned_cols=51 Identities=20% Similarity=0.289 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHhCCC----------------e---EE-EEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVP----------------Y---EI-KILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~----------------~---~~-~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
|+.-..+-...|+++||. | +. .|-+-.-+.+.+.++++.+.++|.+||+=+
T Consensus 29 dl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 29 DLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp CHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 555555555788999984 1 22 366666788999999999999999998643
No 470
>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}
Probab=22.23 E-value=67 Score=22.45 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++||......
T Consensus 13 ~~~~~vr~~L~~~gi~~e~~~v~~ 36 (208)
T 1yq1_A 13 GLGEPIRLLFHLAGVQFEEVRMNP 36 (208)
T ss_dssp TTTHHHHHHHHHHTCCCEEEEECT
T ss_pred CchHHHHHHHHHcCCCeEEEEecc
Confidence 567899999999999999887764
No 471
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=22.22 E-value=2.2e+02 Score=21.76 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKI 52 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~v 52 (138)
+..++++...++.+|.++++-.+|. |+|+...+. ..-|+++
T Consensus 150 ~~~v~~i~~~~~~~~~~t~vl~AS~-r~~~~v~~~----~l~G~d~ 190 (223)
T 1wx0_A 150 GELLREIVEMIQVQDLPVKVIAASI-RHPRHVTEA----ALLGADI 190 (223)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEBCC-CSHHHHHHH----HHTTCSE
T ss_pred HHHHHHHHHHHHHcCCCeEEeeccc-CCHHHHHHH----HHhCCCE
Confidence 5678999999999998888888887 888875542 1245665
No 472
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.15 E-value=2.2e+02 Score=21.12 Aligned_cols=56 Identities=20% Similarity=0.077 Sum_probs=37.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh--cCCeEEEEecCcC
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVE 60 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~--~~~~viIa~AG~~ 60 (138)
..|.+..++..+.++..|..+....+ =-..++.+.+++++..+ .+++++|-.||..
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 45 AKDSDTANKLKDELEDQGAKVALYQS-DLSNEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp GGGHHHHHHHHHHHHTTTCEEEEEEC-CCCSHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred ccCHHHHHHHHHHHHhcCCcEEEEEC-CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 34566777777777777765443332 23567778887776644 3789999999964
No 473
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=21.95 E-value=1.9e+02 Score=25.22 Aligned_cols=51 Identities=24% Similarity=0.252 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHHHHHhCCC-------eE---------------------EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 5 LDLPVMNDAARTLSDFGVP-------YE---------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~-------~~---------------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
-|+.-+.+-.+.|+++|+. ++ ..|-+-.=+.++++++++.+.++|.+||+=
T Consensus 49 Gdl~gi~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD 127 (686)
T 1qho_A 49 GDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVD 127 (686)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3566555556788999995 22 234444457789999999999999999873
No 474
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=21.95 E-value=1.6e+02 Score=18.66 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=30.1
Q ss_pred cCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCc
Q 032570 4 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 59 (138)
Q Consensus 4 ~SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~ 59 (138)
+.|....+.....|++.|. ++..+ .+.++..+.+ +...++++|.-..+
T Consensus 13 dd~~~~~~~l~~~l~~~g~--~v~~~---~~~~~a~~~l---~~~~~dlvi~d~~l 60 (140)
T 3grc_A 13 EDDPDIARLLNLMLEKGGF--DSDMV---HSAAQALEQV---ARRPYAAMTVDLNL 60 (140)
T ss_dssp CSCHHHHHHHHHHHHHTTC--EEEEE---CSHHHHHHHH---HHSCCSEEEECSCC
T ss_pred cCCHHHHHHHHHHHHHCCC--eEEEE---CCHHHHHHHH---HhCCCCEEEEeCCC
Confidence 3567777888888998875 44333 2445555544 34568888875443
No 475
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=21.92 E-value=2e+02 Score=21.79 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC---------------------------CCchHHHHHHHHhhhcCCeEEEEec
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPH---------------------------QNCKEALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaH---------------------------R~p~~~~~~~~~~~~~~~~viIa~A 57 (138)
|...+++-.+.++++|++ -+|+-... ...+.+.++++.+.+.|..|++..-
T Consensus 34 ~~~~~~~~l~~~k~~G~N-~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 34 NHADVDSTFSHISSSGLK-VVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp CHHHHHHHHHHHHHTTCC-EEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCC-EEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 567788888899999998 45662110 1245667888888889999999873
No 476
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=21.91 E-value=3.6e+02 Score=22.72 Aligned_cols=82 Identities=20% Similarity=0.190 Sum_probs=50.6
Q ss_pred CCC-eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcC------------CchhH------------Hhhhcc--CC
Q 032570 21 GVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE------------AHLSG------------VAAANS--QI 73 (138)
Q Consensus 21 gi~-~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~------------a~L~g------------vva~~t--~~ 73 (138)
.+| .-+++. +--+.+++.++++.+++.|++.|++..+.- +.++| -+...+ .+
T Consensus 296 ~~P~V~vKis-pd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 296 KKPLVFVKLA-PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SCCEEEEEEC-SCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCeEEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 467 678865 444556888888888888999888876532 22222 122344 78
Q ss_pred cEEEecCCCCCCCchhhhhhhcCCCCCeeeEEecCCc
Q 032570 74 LVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNA 110 (138)
Q Consensus 74 PVIgvP~~~~~~~G~dLlS~lqmP~GvpvatV~I~~~ 110 (138)
|||++ ++-..+.|.+-++. .| ...|.|..+
T Consensus 375 PVIg~---GGI~s~~DA~e~l~--aG--Ad~Vqigra 404 (443)
T 1tv5_A 375 PIIAS---GGIFSGLDALEKIE--AG--ASVCQLYSC 404 (443)
T ss_dssp CEEEE---SSCCSHHHHHHHHH--TT--EEEEEESHH
T ss_pred cEEEE---CCCCCHHHHHHHHH--cC--CCEEEEcHH
Confidence 99985 34456677555555 35 445555544
No 477
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=21.88 E-value=2.3e+02 Score=22.88 Aligned_cols=51 Identities=18% Similarity=0.212 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEe
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVG 56 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~ 56 (138)
+.-+++--.+.++++|+.++..-....-+.+++.+.+++..+ ..++=|++=
T Consensus 49 S~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~~V~GIlvq 100 (301)
T 1a4i_A 49 SNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQ 100 (301)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCCCCcEEEEe
Confidence 345667778889999999999999998888999999988854 345555553
No 478
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=21.67 E-value=73 Score=25.74 Aligned_cols=42 Identities=19% Similarity=0.145 Sum_probs=30.4
Q ss_pred HHHHHhhhcCCeEEEEecCcCCchhHHhhhc-----cCCcEEEecCCC
Q 032570 40 SYALSAKERGIKIIIVGDGVEAHLSGVAAAN-----SQILVIRVPLLS 82 (138)
Q Consensus 40 ~~~~~~~~~~~~viIa~AG~~a~L~gvva~~-----t~~PVIgvP~~~ 82 (138)
|+.++... .++.|++..|.-+.+.|+..+. ...+||+|-+..
T Consensus 187 Ei~~q~~~-~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~ 233 (364)
T 4h27_A 187 ELKETLWE-KPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFG 233 (364)
T ss_dssp HHHHHCSS-CCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred HHHHHhCC-CCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 44444322 4899999999999999987764 247899997654
No 479
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=21.65 E-value=1.2e+02 Score=24.57 Aligned_cols=62 Identities=15% Similarity=0.238 Sum_probs=38.5
Q ss_pred HHHHhCCC---eEEEEEccCCCchH-----HHHHHHHhhhcCCeEEEEecCcCCchhHHhhhccCCcEEEec
Q 032570 16 TLSDFGVP---YEIKILPPHQNCKE-----ALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 79 (138)
Q Consensus 16 ~L~~~gi~---~~~~V~SaHR~p~~-----~~~~~~~~~~~~~~viIa~AG~~a~L~gvva~~t~~PVIgvP 79 (138)
.++.|+|+ |++.+-|- +..+ +.++.+-.++..++++++..+....++...|.....||+.+=
T Consensus 55 ~~~~~~i~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 55 FFDDMGIRKPDYFLEVAAD--NTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHC-CCCCCCSEECCCCCC--CSHHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHhhCCCCCCceecCCCCC--CHHHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 35789983 45554332 2222 222223334567999999988888888555567889998774
No 480
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=21.63 E-value=1e+02 Score=23.95 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHHHHhCCC----eEEEEEccCC--------CchHHHHHHHHhhhc-CCeEEEEecC
Q 032570 5 LDLPVMNDAARTLSDFGVP----YEIKILPPHQ--------NCKEALSYALSAKER-GIKIIIVGDG 58 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~----~~~~V~SaHR--------~p~~~~~~~~~~~~~-~~~viIa~AG 58 (138)
++.+...++.+.+++.|++ .|+.+.|.+. .|+.+.++++..++. +..|++=+..
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~ 169 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPP 169 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECC
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 4667778888888888877 7888877663 677788888766543 5567665544
No 481
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=21.61 E-value=1.9e+02 Score=24.93 Aligned_cols=50 Identities=8% Similarity=0.050 Sum_probs=38.1
Q ss_pred CHH-HHHHHHHHHHHhCCCe--------------------E-EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 6 DLP-VMNDAARTLSDFGVPY--------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 6 D~~-~~~~~~~~L~~~gi~~--------------------~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|+. +.++....|+++|+.. + ..|-+-.-+++++.++++.+.++|.+||+=
T Consensus 153 ~~~~i~~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD 224 (617)
T 1m7x_A 153 SYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILD 224 (617)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 444 3455558899999951 1 356666778999999999999999999874
No 482
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=21.59 E-value=2e+02 Score=20.81 Aligned_cols=56 Identities=11% Similarity=0.101 Sum_probs=32.0
Q ss_pred HHHHHH---HhCCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCC----chhHHhhhc
Q 032570 13 AARTLS---DFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEA----HLSGVAAAN 70 (138)
Q Consensus 13 ~~~~L~---~~gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a----~L~gvva~~ 70 (138)
....|+ ++|+..+..++ --.++.+.+.++++.+ .++++||+..|.+- ..+-+++..
T Consensus 30 l~~~l~~l~~~G~~v~~~iv--~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~~ 93 (178)
T 2pbq_A 30 IIDYLKDVIITPFEVEYRVI--PDERDLIEKTLIELADEKGCSLILTTGGTGPAPRDVTPEATEAV 93 (178)
T ss_dssp HHHHHHHHBCSCCEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 455566 88886533332 2344555555555544 26899998877653 345555443
No 483
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=21.56 E-value=1.7e+02 Score=22.13 Aligned_cols=58 Identities=7% Similarity=0.043 Sum_probs=38.7
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHhhh-cCCeEEEEecCcCCchhHH---hhhccCCcEEEe
Q 032570 21 GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGV---AAANSQILVIRV 78 (138)
Q Consensus 21 gi~~~~~V~SaHR~p~~~~~~~~~~~~-~~~~viIa~AG~~a~L~gv---va~~t~~PVIgv 78 (138)
|.++++.+..-.-.|++..+.+++... ++++.||...+.+..++-. +.....+|+|..
T Consensus 44 G~~i~l~~~D~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~ 105 (364)
T 3lop_A 44 GETIRLVARDDEQKIEQTVRNVRDMARVDNPVALLTVVGTANVEALMREGVLAEARLPLVGP 105 (364)
T ss_dssp TBCEEEEEEECTTCHHHHHHHHHHHHHHSCEEEEECCCCHHHHHHHHHTTHHHHHTCCEESC
T ss_pred CeEEEEEEeCCCCCHHHHHHHHHHHHhhcCcEEEEecCCCHHHHhhCchhhHHhcCCcEEEc
Confidence 567899998888899988888877765 4777777644433222211 234567899854
No 484
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.54 E-value=2.3e+02 Score=20.38 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=25.8
Q ss_pred eEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecC
Q 032570 24 YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 58 (138)
Q Consensus 24 ~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG 58 (138)
.++-|+--.-.-+.+..|+++++.+|..||++-..
T Consensus 78 ldvvvivttddkewikdfieeakergvevfvvynn 112 (162)
T 2l82_A 78 LDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecC
Confidence 34555555556677888999999999999987543
No 485
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}
Probab=21.52 E-value=79 Score=22.11 Aligned_cols=23 Identities=13% Similarity=0.112 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcc
Q 032570 9 VMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
.++++.-.|++.|++|+......
T Consensus 12 ~~~~v~~~L~~~gi~~e~~~v~~ 34 (207)
T 2x64_A 12 CSLADHILLRWSGSSFDLQFLDH 34 (207)
T ss_dssp TTHHHHHHHHHHTCCEEEEECCT
T ss_pred cHHHHHHHHHHcCCCcceEEecc
Confidence 36789999999999999887765
No 486
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=21.47 E-value=1.2e+02 Score=24.46 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=27.6
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCc
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 62 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~ 62 (138)
+.++..|...|. .|...||.++.+.++++ .++++|+..|...-
T Consensus 175 ~plA~lL~~~gA----tVtv~hs~T~~L~~~~~-----~ADIVI~Avg~p~~ 217 (286)
T 4a5o_A 175 RPMALELLLGGC----TVTVTHRFTRDLADHVS-----RADLVVVAAGKPGL 217 (286)
T ss_dssp HHHHHHHHHTTC----EEEEECTTCSCHHHHHH-----TCSEEEECCCCTTC
T ss_pred HHHHHHHHHCCC----eEEEEeCCCcCHHHHhc-----cCCEEEECCCCCCC
Confidence 334444444444 34445887777877764 57999999986433
No 487
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=21.46 E-value=1.6e+02 Score=25.71 Aligned_cols=50 Identities=10% Similarity=0.085 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchH-HHHHHHHhhhcCCeEEEEec
Q 032570 5 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKE-ALSYALSAKERGIKIIIVGD 57 (138)
Q Consensus 5 SD~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~-~~~~~~~~~~~~~~viIa~A 57 (138)
.|.+.+++=.+.++++|++ -||+. |-.|+. -.++++.+.+.|+.|++.+.
T Consensus 84 ~~~e~~~rDi~LmK~~GiN-~VRvy--~~~P~~~~d~~ldl~~~~GIyVIle~~ 134 (555)
T 2w61_A 84 ADPKICLRDIPFLKMLGVN-TLRVY--AIDPTKSHDICMEALSAEGMYVLLDLS 134 (555)
T ss_dssp GCHHHHHHHHHHHHHHTCS-EEEEC--CCCTTSCCHHHHHHHHHTTCEEEEESC
T ss_pred CCHHHHHHHHHHHHHcCCC-EEEEe--ccCCCCChHHHHHHHHhcCCEEEEeCC
Confidence 3778999999999999999 78884 655543 24555666678999998853
No 488
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=21.33 E-value=1.9e+02 Score=23.79 Aligned_cols=28 Identities=14% Similarity=0.058 Sum_probs=22.4
Q ss_pred EEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 28 ILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 28 V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|-+-.-+.++++++++.+.++|++||+=
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~Gi~VilD 102 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNNGIQVYGD 102 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3344456789999999999999999874
No 489
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=21.29 E-value=2.5e+02 Score=22.82 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhc-CCeEEEE
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIV 55 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~-~~~viIa 55 (138)
.-+++--.+.+++.|+.++..-.+..-+-+++.+.+++..++ .++=|++
T Consensus 68 ~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D~~V~GIlV 117 (303)
T 4b4u_A 68 ATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILL 117 (303)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCCCCccEEEE
Confidence 345667778899999999999999999999999999888543 4444444
No 490
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=21.25 E-value=2.4e+02 Score=23.02 Aligned_cols=96 Identities=11% Similarity=0.057 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHh----------hh---cCCeEEEEecC-cCCchhHHhhhcc
Q 032570 6 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA----------KE---RGIKIIIVGDG-VEAHLSGVAAANS 71 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~----------~~---~~~~viIa~AG-~~a~L~gvva~~t 71 (138)
+.+.++++.+..+++|+++.+++.. +.++.....+.+ +. .+.+.+++=+- .+..---.+ ..+
T Consensus 241 s~e~l~~~~~~A~~~g~~v~~H~~e---~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l-~~~ 316 (476)
T 4aql_A 241 SETLMGELGNIAKTRDLHIQSHISE---NRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVF-HER 316 (476)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESC---SHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCceEEEecC---CHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHH-HHc
Confidence 4566777777778888887776653 223333222211 11 12334333211 111111122 235
Q ss_pred CCcEEEecCCCCCC-Cchh-hhhhhcCCCCCeeeEEecC
Q 032570 72 QILVIRVPLLSEDW-SEDD-VINSIRMPSHVQVASVPRN 108 (138)
Q Consensus 72 ~~PVIgvP~~~~~~-~G~d-LlS~lqmP~GvpvatV~I~ 108 (138)
...|..||.+...+ .|+. +-.+++ .|++|+ ++-|
T Consensus 317 g~~v~~~P~sn~~l~~g~~p~~~~~~--~Gv~v~-lGtD 352 (476)
T 4aql_A 317 GASIAHCPNSNLSLSSGFLNVLEVLK--HEVKIG-LGTD 352 (476)
T ss_dssp TCEEEECHHHHHHTTCCCCCHHHHHH--TTCEEE-ECCC
T ss_pred CCEEEECchhhhhhCcchHHHHHHHH--CCCcEE-EeCC
Confidence 56788888864222 3454 555555 577765 3445
No 491
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.24 E-value=1.7e+02 Score=22.72 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEe
Q 032570 7 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 56 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~ 56 (138)
++..++.++.+++.|.++.+.|.+--+ ++...+++ +-|+++||++
T Consensus 179 l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~----~aGAD~~V~G 223 (246)
T 3inp_A 179 LDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIA----VCGVNAFVAG 223 (246)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHH----TTTCCEEEES
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHH----HcCCCEEEEe
Confidence 455555666666666666666666544 44444443 2466766664
No 492
>3ktw_A SRP19, signal recognition particle 19 kDa protein; ribonucleoprotein complex, RNA-RNA tertiary interactions, AS loop, 7S RNA; 3.20A {Sulfolobus solfataricus}
Probab=21.17 E-value=37 Score=23.93 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHhCCCeEE
Q 032570 7 LPVMNDAARTLSDFGVPYEI 26 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~ 26 (138)
-|.++|+.+.|+++|+++.+
T Consensus 43 nP~~~EI~~a~~~Lgl~~~v 62 (109)
T 3ktw_A 43 KIKTEELVSTLRELGLDPIV 62 (109)
T ss_dssp CCCHHHHHHHHHHTTCCCEE
T ss_pred CCCHHHHHHHHHHcCCCeEE
Confidence 46789999999999998754
No 493
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.03 E-value=1.9e+02 Score=24.36 Aligned_cols=50 Identities=14% Similarity=0.345 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHhCCC----------------e---E-EEEEccCCCchHHHHHHHHhhhcCCeEEEE
Q 032570 6 DLPVMNDAARTLSDFGVP----------------Y---E-IKILPPHQNCKEALSYALSAKERGIKIIIV 55 (138)
Q Consensus 6 D~~~~~~~~~~L~~~gi~----------------~---~-~~V~SaHR~p~~~~~~~~~~~~~~~~viIa 55 (138)
|+.-..+-...|+++||. | + ..|-+..-+++.+.++++.+.++|.+||+=
T Consensus 30 dl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 99 (557)
T 1zja_A 30 DFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVD 99 (557)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 555444445788999985 1 2 246666678899999999999999999864
No 494
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=20.83 E-value=2.1e+02 Score=19.70 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCch
Q 032570 8 PVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 63 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~--------------------~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L 63 (138)
..++.....|..+|.++. +-+.|.-+...++.+.++.++++|++++..-....+-|
T Consensus 62 ~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l 137 (183)
T 2xhz_A 62 HIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSM 137 (183)
T ss_dssp HHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHH
T ss_pred HHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChh
Confidence 455666666666666531 45667777777777777777777776544433333333
No 495
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.80 E-value=2.2e+02 Score=19.75 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=28.8
Q ss_pred CCcCCHHHHHHHHHHHHHhCCCeE---------------------EEEEccCCCchHHHHHHHHhhhcCCeEE
Q 032570 2 ESDLDLPVMNDAARTLSDFGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKII 53 (138)
Q Consensus 2 GS~SD~~~~~~~~~~L~~~gi~~~---------------------~~V~SaHR~p~~~~~~~~~~~~~~~~vi 53 (138)
|.-+-...++.....|..+|.++. +-+.|.-+...++.+.++.++++|++++
T Consensus 46 G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 46 GMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp CCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred ecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 333445677777777777777643 2334444445555555555555555443
No 496
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}
Probab=20.77 E-value=65 Score=22.48 Aligned_cols=24 Identities=13% Similarity=0.007 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc
Q 032570 8 PVMNDAARTLSDFGVPYEIKILPP 31 (138)
Q Consensus 8 ~~~~~~~~~L~~~gi~~~~~V~Sa 31 (138)
+.++++.-.|++.|++|+......
T Consensus 13 ~~~~~vr~~L~~~gi~ye~~~v~~ 36 (206)
T 2on5_A 13 GLAEPIRQIFALAGQKYEDVRYTF 36 (206)
T ss_dssp GGGHHHHHHHHHHTCCCEEEEECT
T ss_pred cchHHHHHHHHHcCCCceEEEecH
Confidence 578899999999999999877764
No 497
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=20.70 E-value=53 Score=26.80 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEE
Q 032570 11 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 54 (138)
Q Consensus 11 ~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viI 54 (138)
.-+..+.+++|++.-.+.+....+.+++.++++++...|++-+.
T Consensus 79 ~~~~~i~~~~gi~~v~Hltc~~~t~~ei~~~L~~~~~~GI~niL 122 (315)
T 3ijd_A 79 IYSENYLKDLKIPKIIYRCVGKYTPDEFRRLTRPVSGQDAFSVF 122 (315)
T ss_dssp HHHHHHCTTSCSCEEEEEEGGGSCHHHHHHHHSCCTTCCCEEEE
T ss_pred HHHHHHHHHhCCCceeeeeeCCCCHHHHHHHHHHHHHcCCcEEe
Confidence 34556667899999999999999999999999999888877644
No 498
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=20.69 E-value=95 Score=24.50 Aligned_cols=45 Identities=18% Similarity=-0.003 Sum_probs=34.0
Q ss_pred HHHHHHhhh--cCCeEEEEecCcCCchhHHhhhcc----CCcEEEecCCCC
Q 032570 39 LSYALSAKE--RGIKIIIVGDGVEAHLSGVAAANS----QILVIRVPLLSE 83 (138)
Q Consensus 39 ~~~~~~~~~--~~~~viIa~AG~~a~L~gvva~~t----~~PVIgvP~~~~ 83 (138)
.|+.++... ..++.|++..|.-+.+.|+..+.- ...||+|.+..+
T Consensus 180 ~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~ 230 (341)
T 1f2d_A 180 DEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFT 230 (341)
T ss_dssp HHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSC
T ss_pred HHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCc
Confidence 455555532 358999999999999999988764 456999998765
No 499
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=20.56 E-value=80 Score=21.92 Aligned_cols=20 Identities=20% Similarity=0.282 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHhCCCeEE
Q 032570 7 LPVMNDAARTLSDFGVPYEI 26 (138)
Q Consensus 7 ~~~~~~~~~~L~~~gi~~~~ 26 (138)
-.++.++.++|++.||.|+.
T Consensus 40 ~eIm~eI~rvL~~~gi~~~~ 59 (120)
T 3ose_A 40 NDMMREIRKVLDANNCDYEQ 59 (120)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 46899999999999998764
No 500
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=20.50 E-value=94 Score=25.11 Aligned_cols=48 Identities=19% Similarity=0.148 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHhhhcCCeEEEEecCcCCchhH
Q 032570 9 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 65 (138)
Q Consensus 9 ~~~~~~~~L~~~gi~~~~~V~SaHR~p~~~~~~~~~~~~~~~~viIa~AG~~a~L~g 65 (138)
+.+.++..|...| ..|...|+.++.+.+++++ ++++|+..|...-+..
T Consensus 171 VG~p~A~lL~~~g----AtVtv~hs~t~~L~~~~~~-----ADIVI~Avg~p~lI~~ 218 (288)
T 1b0a_A 171 VGRPMSMELLLAG----CTTTVTHRFTKNLRHHVEN-----ADLLIVAVGKPGFIPG 218 (288)
T ss_dssp THHHHHHHHHTTT----CEEEEECSSCSCHHHHHHH-----CSEEEECSCCTTCBCT
T ss_pred HHHHHHHHHHHCC----CeEEEEeCCchhHHHHhcc-----CCEEEECCCCcCcCCH
Done!