Query 032578
Match_columns 137
No_of_seqs 135 out of 1038
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 04:38:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032578.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032578hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.5E-46 1.2E-50 269.7 15.9 129 7-136 23-151 (169)
2 2r0j_A Ubiquitin carrier prote 100.0 2.2E-46 7.4E-51 265.9 14.5 128 7-135 20-147 (149)
3 4gpr_A Ubiquitin-conjugating e 100.0 2.3E-46 7.8E-51 266.3 13.6 128 7-135 23-150 (151)
4 1z2u_A Ubiquitin-conjugating e 100.0 6.4E-46 2.2E-50 263.7 15.2 128 7-135 23-150 (150)
5 2aak_A UBC1, ubiquitin conjuga 100.0 7.6E-46 2.6E-50 263.9 15.3 128 8-136 24-151 (152)
6 2ayv_A Ubiquitin-conjugating e 100.0 3.8E-46 1.3E-50 268.8 13.6 127 7-134 40-166 (166)
7 2c2v_B Ubiquitin-conjugating e 100.0 1.4E-46 4.9E-51 268.2 10.9 128 7-135 24-151 (154)
8 3h8k_A Ubiquitin-conjugating e 100.0 1.1E-45 3.8E-50 265.9 14.1 128 7-135 22-163 (164)
9 2c4o_A Ubiquitin-conjugating e 100.0 8.7E-46 3E-50 266.8 13.5 128 7-135 38-165 (165)
10 1jat_A Ubiquitin-conjugating e 100.0 8.5E-46 2.9E-50 264.4 12.9 128 8-136 25-152 (155)
11 1fxt_A Ubiquitin-conjugating e 100.0 4E-46 1.4E-50 264.5 11.1 128 7-135 20-149 (149)
12 1zdn_A Ubiquitin-conjugating e 100.0 4.8E-46 1.7E-50 266.4 11.5 127 7-134 32-158 (158)
13 2e2c_A Ubiquitin conjugating e 100.0 1.9E-45 6.4E-50 262.9 13.5 127 8-136 29-155 (156)
14 2ucz_A UBC7, ubiquitin conjuga 100.0 1.7E-45 5.7E-50 265.2 13.1 127 8-135 24-164 (165)
15 2bep_A Ubiquitin-conjugating e 100.0 2.5E-45 8.5E-50 263.0 13.8 128 7-135 30-158 (159)
16 2f4z_A Tgtwinscan_2721 - E2 do 100.0 4.4E-45 1.5E-49 268.8 15.2 130 6-136 63-193 (193)
17 1yh2_A HSPC150 protein similar 100.0 2.7E-45 9.2E-50 265.1 13.6 128 7-135 23-154 (169)
18 3rcz_B SUMO-conjugating enzyme 100.0 1.1E-44 3.7E-49 260.6 14.9 119 15-134 42-162 (163)
19 2gjd_A Ubiquitin-conjugating e 100.0 1.7E-44 5.8E-49 258.1 14.9 121 14-135 35-157 (157)
20 1i7k_A Ubiquitin-conjugating e 100.0 8.1E-45 2.8E-49 264.6 13.1 126 8-135 50-175 (179)
21 2onu_A Ubiquitin-conjugating e 100.0 6.3E-45 2.1E-49 259.2 11.9 128 8-136 19-148 (152)
22 3k9o_A Ubiquitin-conjugating e 100.0 1.5E-44 5.2E-49 267.6 14.1 129 7-136 27-156 (201)
23 3bzh_A Ubiquitin-conjugating e 100.0 1.3E-44 4.3E-49 266.6 13.5 128 7-135 67-194 (194)
24 2grr_A Ubiquitin-conjugating e 100.0 3E-44 1E-48 257.8 15.1 123 13-136 37-161 (161)
25 2pwq_A Ubiquitin conjugating e 100.0 1.1E-44 3.7E-49 270.6 11.3 128 7-135 42-170 (216)
26 3rz3_A Ubiquitin-conjugating e 100.0 5.8E-44 2E-48 261.0 12.8 129 7-136 26-174 (183)
27 1wzv_A Ubiquitin-conjugating e 100.0 7.2E-44 2.5E-48 254.4 11.8 127 8-136 24-152 (155)
28 3fn1_B NEDD8-conjugating enzym 100.0 1.9E-43 6.4E-48 255.0 13.3 127 7-135 33-167 (167)
29 3e46_A Ubiquitin-conjugating e 100.0 2.2E-43 7.5E-48 268.9 14.1 129 7-136 79-208 (253)
30 2y9m_A Ubiquitin-conjugating e 100.0 2.8E-43 9.5E-48 255.2 13.9 122 13-135 43-168 (172)
31 1y8x_A Ubiquitin-conjugating e 100.0 2.9E-43 9.8E-48 252.5 13.0 125 7-133 23-148 (160)
32 2z5d_A Ubiquitin-conjugating e 100.0 5.6E-44 1.9E-48 260.1 9.2 120 15-135 48-169 (179)
33 1tte_A Ubiquitin-conjugating e 100.0 4.4E-44 1.5E-48 267.2 8.9 128 7-135 21-150 (215)
34 1yrv_A Ubiquitin-conjugating l 100.0 2E-43 7E-48 255.2 10.9 123 8-132 43-168 (169)
35 2nvu_C NEDD8-conjugating enzym 100.0 7.9E-43 2.7E-47 254.4 12.6 125 7-133 43-168 (180)
36 1yf9_A Ubiquitin carrier prote 100.0 2.6E-43 9E-48 255.1 9.8 121 14-135 34-156 (171)
37 1c4z_D UBCH7, ubiquitin conjug 100.0 4.9E-43 1.7E-47 249.8 10.3 124 11-136 26-150 (154)
38 2awf_A Ubiquitin-conjugating e 100.0 3.3E-43 1.1E-47 254.8 9.3 121 8-129 37-172 (172)
39 3o2u_A NEDD8-conjugating enzym 100.0 5.2E-42 1.8E-46 252.0 11.7 120 12-133 55-177 (190)
40 4ddg_A Ubiquitin-conjugating e 100.0 3E-41 1E-45 271.7 15.4 129 7-136 22-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 8.5E-40 2.9E-44 235.9 9.5 121 7-128 39-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 2.4E-38 8.2E-43 226.0 5.0 104 13-118 50-156 (156)
43 3ceg_A Baculoviral IAP repeat- 100.0 1.5E-37 5.1E-42 243.1 9.5 124 10-134 102-242 (323)
44 2fo3_A Ubiquitin-conjugating e 100.0 3.1E-36 1.1E-40 208.0 8.9 97 7-104 25-122 (125)
45 1jat_B Ubiquitin-conjugating e 100.0 2.1E-37 7.3E-42 217.1 2.2 101 13-115 35-138 (138)
46 2a4d_A Ubiquitin-conjugating e 100.0 4.7E-36 1.6E-40 214.8 8.2 96 16-112 57-156 (160)
47 2h2y_A Ubiquitin-conjugating e 100.0 1.5E-35 5.2E-40 207.2 9.4 96 7-103 39-135 (136)
48 2hlw_A Ubiquitin-conjugating e 100.0 5.1E-36 1.8E-40 216.6 5.2 97 15-112 66-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 2.3E-34 8E-39 201.2 10.3 87 12-99 48-136 (136)
50 1zuo_A Hypothetical protein LO 100.0 7.8E-35 2.7E-39 213.1 1.4 120 8-136 50-183 (186)
51 2f4w_A Ubiquitin-conjugating e 100.0 1.6E-32 5.6E-37 201.0 12.9 114 8-124 34-153 (187)
52 2z6o_A UFM1-conjugating enzyme 99.9 3.3E-24 1.1E-28 152.6 0.9 80 12-92 50-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.9E-20 1E-24 132.8 7.7 89 11-105 58-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 2.8E-17 9.6E-22 114.8 0.7 59 18-77 58-127 (168)
55 3obq_A Tumor susceptibility ge 99.6 1.2E-15 4.1E-20 107.2 7.3 82 12-100 48-138 (146)
56 2ebm_A RWD domain-containing p 96.5 0.0093 3.2E-07 39.8 6.7 54 3-59 25-78 (128)
57 2yz0_A Serine/threonine-protei 95.2 0.028 9.4E-07 38.0 4.7 25 35-59 61-85 (138)
58 2day_A Ring finger protein 25; 95.1 0.07 2.4E-06 35.4 6.3 25 36-60 59-83 (128)
59 2daw_A RWD domain containing p 94.6 0.45 1.5E-05 32.7 9.8 23 37-59 76-98 (154)
60 2ebk_A RWD domain-containing p 94.3 0.14 4.9E-06 33.9 6.3 39 18-58 40-78 (128)
61 3zqs_A E3 ubiquitin-protein li 93.7 0.21 7.3E-06 35.8 6.6 52 34-99 36-87 (186)
62 2dax_A Protein C21ORF6; RWD do 91.7 0.54 1.8E-05 32.1 6.3 25 36-60 73-97 (152)
63 1ukx_A GCN2, GCN2 EIF2alpha ki 91.7 0.12 4E-06 34.7 2.8 23 36-58 63-85 (137)
64 2cwb_A Chimera of immunoglobul 86.7 0.13 4.4E-06 33.8 0.0 35 100-134 20-54 (108)
65 1f35_A Olfactory marker protei 57.0 6.9 0.00024 26.5 2.4 19 68-86 73-91 (162)
66 2fkn_A Urocanate hydratase; ro 50.3 15 0.00051 30.2 3.8 31 107-137 276-306 (552)
67 1x87_A Urocanase protein; stru 50.0 15 0.00052 30.2 3.8 30 108-137 276-305 (551)
68 1uwk_A Urocanate hydratase; hy 49.6 16 0.00053 30.2 3.8 30 108-137 281-310 (557)
69 4g7w_A Putative uncharacterize 41.9 6.4 0.00022 25.9 0.4 46 2-50 52-100 (160)
70 4g7x_A Putative uncharacterize 40.7 5.3 0.00018 24.6 -0.2 38 2-42 35-73 (105)
71 1roc_A Anti-silencing protein 36.5 97 0.0033 21.3 5.7 43 6-51 29-84 (155)
72 2hue_A Anti-silencing protein 31.5 1.3E+02 0.0045 21.0 5.8 45 6-53 34-91 (175)
73 2idc_A Anti-silencing protein 30.5 1.3E+02 0.0046 21.1 5.7 43 6-51 30-85 (179)
74 3rls_A YAF9, protein AF-9 homo 28.7 1.5E+02 0.0051 20.7 6.1 46 14-62 29-74 (175)
75 2i32_A Anti-silencing factor 1 26.1 1.7E+02 0.0059 20.5 5.7 45 6-53 53-110 (182)
76 3keb_A Probable thiol peroxida 22.8 67 0.0023 23.1 3.1 46 66-111 143-188 (224)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-46 Score=269.72 Aligned_cols=129 Identities=53% Similarity=0.934 Sum_probs=122.9
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.+.|+|+++
T Consensus 23 gi~~~p~~~nl~~W~~~I~-GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~~WsP~~~ 101 (169)
T 1ayz_A 23 GVSASPLPDNVMVWNAMII-GPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYD 101 (169)
T ss_dssp TEEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTTCCTTCC
T ss_pred CEEEEecCCccccceEEEE-CCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhccCCCCcCc
Confidence 3455556789999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|+++|+..
T Consensus 102 i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~ 151 (169)
T 1ayz_A 102 VASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWED 151 (169)
T ss_dssp HHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999863
No 2
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=2.2e-46 Score=265.91 Aligned_cols=128 Identities=34% Similarity=0.591 Sum_probs=122.3
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++
T Consensus 20 ~i~~~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~ 98 (149)
T 2r0j_A 20 GIMAVPVPENYRHFNILIN-GPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQ 98 (149)
T ss_dssp TEEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTSC
T ss_pred CEEEEECCCcccEEEEEEE-CCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcCCCCCCCCc
Confidence 3455556679999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|++++|.
T Consensus 99 i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 147 (149)
T 2r0j_A 99 IRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYAN 147 (149)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999999999985
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.3e-46 Score=266.32 Aligned_cols=128 Identities=37% Similarity=0.658 Sum_probs=122.8
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++
T Consensus 23 ~i~~~p~~~nl~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~ 101 (151)
T 4gpr_A 23 NCSAGPVGDDIFHWTATIT-GPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILKDQWSPALT 101 (151)
T ss_dssp TEEEEESSSCTTEEEEEEE-CCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCC
T ss_pred CEEEEEcCCCceEEEEEEe-CCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccccCCCCCCCc
Confidence 4556666789999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 102 i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 102 LSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp HHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999974
No 4
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.4e-46 Score=263.72 Aligned_cols=128 Identities=41% Similarity=0.749 Sum_probs=121.9
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++
T Consensus 23 ~~~~~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~ 101 (150)
T 1z2u_A 23 QCSAGPVGDDLFHWQATIM-GPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 101 (150)
T ss_dssp SEEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCC
T ss_pred CEEEEECCCcceEEEEEEE-CCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccccCCCCCCCC
Confidence 3455556689999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||++++++|.
T Consensus 102 i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 102 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999873
No 5
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=7.6e-46 Score=263.86 Aligned_cols=128 Identities=77% Similarity=1.153 Sum_probs=122.0
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCH
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV 87 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i 87 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++
T Consensus 24 i~~~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i 102 (152)
T 2aak_A 24 ISGAPQDNNIMLWNAVIF-GPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV 102 (152)
T ss_dssp EEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTTSCCTTCCH
T ss_pred EEEEeCCCCccEEEEEEe-CCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcCCCCCCCcH
Confidence 445556789999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 88 AAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 88 ~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+++++|+..
T Consensus 103 ~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 103 AAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp HHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999999864
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-46 Score=268.84 Aligned_cols=127 Identities=37% Similarity=0.710 Sum_probs=121.4
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++
T Consensus 40 gi~~~~~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~~~WsP~~t 118 (166)
T 2ayv_A 40 NCSAGPVGDDMFHWQATIM-GPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILKDQWSPALT 118 (166)
T ss_dssp TEEEEECSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCC
T ss_pred CEEEEEcCCCcceeeEEEE-CCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccccccCCCCCc
Confidence 3455556678999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 134 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~ 134 (137)
|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|++++|
T Consensus 119 i~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 119 ISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999986
No 7
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-46 Score=268.16 Aligned_cols=128 Identities=33% Similarity=0.571 Sum_probs=120.3
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++
T Consensus 24 ~i~~~~~~~~l~~w~~~i~-GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~ 102 (154)
T 2c2v_B 24 GIKAEPDESNARYFHVVIA-GPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQ 102 (154)
T ss_dssp TEEEEECSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHHTSCCTTCC
T ss_pred CEEEEECCCchheEEEEEE-CCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhccCCCCCCCc
Confidence 3555556679999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|++++|.
T Consensus 103 i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 103 IRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp HHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999985
No 8
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.1e-45 Score=265.87 Aligned_cols=128 Identities=34% Similarity=0.659 Sum_probs=120.5
Q ss_pred eeeecCCc-ceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCC-------
Q 032578 7 DCLLDIKQ-VFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ------- 78 (137)
Q Consensus 7 ~~~~d~~~-~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~------- 78 (137)
+|.+...+ +|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.
T Consensus 22 gi~~~~~~~~nl~~w~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~ 100 (164)
T 3h8k_A 22 GIVAGPMNEENFFEWEALIM-GPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPM 100 (164)
T ss_dssp TEEEEESSTTCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCC
T ss_pred CEEEEECCCCCccEEEEEEe-CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccc
Confidence 34454444 48999999997 9999999999999999999999999999999999999999999999999996
Q ss_pred ------CcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 79 ------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 79 ------~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
++|+|++||++||.+|+++|.+|++++|+|.+||.+|++|+++|+++||++++||++
T Consensus 101 ~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 101 GYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp SCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999985
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=8.7e-46 Score=266.77 Aligned_cols=128 Identities=41% Similarity=0.757 Sum_probs=122.0
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++
T Consensus 38 gi~~~p~~~nl~~W~~~I~-GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~~~W~P~~t 116 (165)
T 2c4o_A 38 QCSAGPVGDDMFHWQATIM-GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALT 116 (165)
T ss_dssp TEEEEESSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCC
T ss_pred CEEEEEcCCCcceeEEEEE-CCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhcCCCCCcCc
Confidence 3555556688999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|++++|.
T Consensus 117 i~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 117 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999873
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=8.5e-46 Score=264.39 Aligned_cols=128 Identities=32% Similarity=0.588 Sum_probs=122.3
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCH
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV 87 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i 87 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|
T Consensus 25 i~~~~~~~~l~~w~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i 103 (155)
T 1jat_A 25 ITAEPHDDNLRYFQVTIE-GPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQI 103 (155)
T ss_dssp EEEEEETTEEEEEEEEEE-CCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGTTTCCTTCCH
T ss_pred EEEEECCCchhEEEEEEE-CCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhccCCCCCCCH
Confidence 445556689999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 88 AAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 88 ~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++|+..
T Consensus 104 ~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 104 RTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp HHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999864
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=4e-46 Score=264.50 Aligned_cols=128 Identities=30% Similarity=0.576 Sum_probs=120.9
Q ss_pred eeeecCCcc-eEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCc
Q 032578 7 DCLLDIKQV-FILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPI 84 (137)
Q Consensus 7 ~~~~d~~~~-~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~ 84 (137)
+|.+...++ |+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|+
T Consensus 20 ~i~~~~~~~~~l~~w~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~ 98 (149)
T 1fxt_A 20 HITLEFVSESDIHHLKGTFL-GPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPV 98 (149)
T ss_dssp CCEEEESSSSCSSEEEEEEE-CCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHTSCCTT
T ss_pred CEEEEECCCCCceEEEEEEE-CCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCCCCCCC
Confidence 344555555 8999999997 999999999999999999999999999999999999999998 9999999999999999
Q ss_pred cCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 85 YDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 85 ~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
+++.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 99 ~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 99 ITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp CCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999873
No 12
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-46 Score=266.42 Aligned_cols=127 Identities=31% Similarity=0.566 Sum_probs=121.4
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++
T Consensus 32 gi~~~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~ 110 (158)
T 1zdn_A 32 GIKVFPNEEDLTDLQVTIE-GPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELG 110 (158)
T ss_dssp TEEEEECSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTTTCCTTCC
T ss_pred CEEEEECCCChhheeEEEE-CCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCCCCCCCCc
Confidence 3455556788999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 134 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~ 134 (137)
+.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++||
T Consensus 111 i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 111 IRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp HHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999986
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-45 Score=262.86 Aligned_cols=127 Identities=38% Similarity=0.650 Sum_probs=120.9
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCH
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV 87 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i 87 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++++
T Consensus 29 i~~~p~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i 107 (156)
T 2e2c_A 29 ITAFPDGDNLFKWVATLD-GPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDV 107 (156)
T ss_dssp EEEEESSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCH
T ss_pred EEEEECCCCccEEEEEEE-CCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccccCCCCCcH
Confidence 444445678999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 88 AAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 88 ~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
.+||.+|+++|.+|++++|+|.+||++| +|+++|+++||++++++++.
T Consensus 108 ~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 108 RTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp HHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999 89999999999999999874
No 14
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-45 Score=265.24 Aligned_cols=127 Identities=34% Similarity=0.655 Sum_probs=120.0
Q ss_pred eeecCC-cceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccC---------
Q 032578 8 CLLDIK-QVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL--------- 77 (137)
Q Consensus 8 ~~~d~~-~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l--------- 77 (137)
|.+... ++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|
T Consensus 24 i~~~~~~~~~l~~w~~~i~-GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~ 102 (165)
T 2ucz_A 24 IVAGPKSENNIFIWDCLIQ-GPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNM 102 (165)
T ss_dssp EEEEESSSSCCSEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTS
T ss_pred EEEEECCCCCccEEEEEEE-CCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccc
Confidence 444443 368999999997 999999999999999999999999999999999999999999999999999
Q ss_pred ----CCcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 78 ----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 78 ----~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||++++++++
T Consensus 103 ~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 103 YELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp TTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999999999999999999999999999999975
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=2.5e-45 Score=262.96 Aligned_cols=128 Identities=28% Similarity=0.576 Sum_probs=121.8
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~~ 85 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|++
T Consensus 30 ~i~~~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~ 108 (159)
T 2bep_A 30 QIKVDLVDENFTELRGEIA-GPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAM 108 (159)
T ss_dssp SEEEEECSSSSSEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTC
T ss_pred CEEEEeCCCchheEEEEEE-CCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhccCCCCC
Confidence 3555566678999999997 999999999999999999999999999999999999999994 99999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
++.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++|+.
T Consensus 109 ~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 109 TLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999985
No 16
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-45 Score=268.76 Aligned_cols=130 Identities=33% Similarity=0.604 Sum_probs=122.9
Q ss_pred eeeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceec-CCCcEEeccCCCcCCCc
Q 032578 6 IDCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQNQWSPI 84 (137)
Q Consensus 6 ~~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~~~W~p~ 84 (137)
-+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|+
T Consensus 63 ~gi~v~~~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~ 141 (193)
T 2f4z_A 63 HGVSAQIVGGDIHRWRGFIA-GPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPA 141 (193)
T ss_dssp -CEEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTT
T ss_pred CcEEEEEcCCCcceEEEEEe-CCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccccCCCC
Confidence 35666667789999999997 99999999999999999999999999999999999999999 58999999999999999
Q ss_pred cCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 85 YDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 85 ~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
++|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++||.+
T Consensus 142 ~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 142 LTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAKE 193 (193)
T ss_dssp SCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999999999999999999863
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-45 Score=265.12 Aligned_cols=128 Identities=32% Similarity=0.588 Sum_probs=122.5
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCC----CcCC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ----NQWS 82 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~----~~W~ 82 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+
T Consensus 23 gi~~~~~~~~l~~w~~~I~-GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~ 101 (169)
T 1yh2_A 23 GITCWQDKDQMDDLRAQIL-GGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWR 101 (169)
T ss_dssp TEEEEESSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCC
T ss_pred CEEEEeCCCchheEEEEEE-CCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCcccCCC
Confidence 4556667789999999997 9999999999999999999999999999999999999999999999999998 8899
Q ss_pred CccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 83 PIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 83 p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 102 p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~ 154 (169)
T 1yh2_A 102 PSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHAR 154 (169)
T ss_dssp TTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999985
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-44 Score=260.57 Aligned_cols=119 Identities=41% Similarity=0.788 Sum_probs=116.0
Q ss_pred ceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCc--CCCccCHHHHHH
Q 032578 15 VFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ--WSPIYDVAAILT 92 (137)
Q Consensus 15 ~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~--W~p~~~i~~il~ 92 (137)
.|+++|+++|. ||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|... |+|+++|.+||.
T Consensus 42 ~nl~~W~~~I~-Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~ 120 (163)
T 3rcz_B 42 LDLMNWKVGIP-GKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILL 120 (163)
T ss_dssp EEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHH
T ss_pred CCccEEEEEEE-CCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHH
Confidence 49999999997 999999999999999999999999999999999999999999999999999764 999999999999
Q ss_pred HHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 032578 93 SIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 134 (137)
Q Consensus 93 ~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~ 134 (137)
+|+++|.+|++++|+|.+||.+|++|+++|+++||+|++|||
T Consensus 121 ~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 121 GIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 162 (163)
T ss_dssp HHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999987
No 19
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1.7e-44 Score=258.15 Aligned_cols=121 Identities=37% Similarity=0.711 Sum_probs=117.3
Q ss_pred cceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCC--cCCCccCHHHHH
Q 032578 14 QVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--QWSPIYDVAAIL 91 (137)
Q Consensus 14 ~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~--~W~p~~~i~~il 91 (137)
+.|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.. +|+|+++|.+||
T Consensus 35 ~~nl~~w~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl 113 (157)
T 2gjd_A 35 SMDLQKWEAGIP-GKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIV 113 (157)
T ss_dssp CEEEEEEEEEEE-CCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHH
T ss_pred CCcccEEEEEEE-CCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHH
Confidence 369999999997 99999999999999999999999999999999999999999999999999987 799999999999
Q ss_pred HHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 92 TSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 92 ~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
.+|+++|.+|++++|+|.+||.+|++|+++|+++||+++++||.
T Consensus 114 ~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 114 LGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp HHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred HHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999873
No 20
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.1e-45 Score=264.63 Aligned_cols=126 Identities=35% Similarity=0.609 Sum_probs=120.2
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCH
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDV 87 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i 87 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.++|+|+++|
T Consensus 50 i~~~p~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti 128 (179)
T 1i7k_A 50 ISAFPESDNLFKWVGTIH-GAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILKEKWSALYDV 128 (179)
T ss_dssp EEEEEETTEEEEEEEEEE-BCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGTTTCCTTCCH
T ss_pred EEEEEcCCcccccEEEEE-CCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCcCcCCCCCCH
Confidence 444455679999999997 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 88 AAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 88 ~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
.+||.+|+++|.+|++++|+|.+||++| +|+++|+++||+++++++.
T Consensus 129 ~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~ 175 (179)
T 1i7k_A 129 RTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVT 175 (179)
T ss_dssp HHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999 9999999999999999875
No 21
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=6.3e-45 Score=259.19 Aligned_cols=128 Identities=27% Similarity=0.616 Sum_probs=120.7
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCccC
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYD 86 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~~~ 86 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|+++
T Consensus 19 ~~v~~~~~~l~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~~W~p~~~ 97 (152)
T 2onu_A 19 YDLELNNGSTQDFDVMFH-GPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQTWTPLYS 97 (152)
T ss_dssp CCEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHHHCCTTCC
T ss_pred CEEEEccCccceEEEEEE-CCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccccCCCCCC
Confidence 444555789999999997 999999999999999999999999999999999999999994 899999999989999999
Q ss_pred HHHHHHH-HHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 87 VAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 87 i~~il~~-l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
+.+||.+ |++||.+|++++|+|.+||++|++|+++|+++||+++++++..
T Consensus 98 i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 98 LVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp HHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred HHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999 6899999999999999999999999999999999999999853
No 22
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.5e-44 Score=267.56 Aligned_cols=129 Identities=29% Similarity=0.578 Sum_probs=122.7
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~~ 85 (137)
++.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|++
T Consensus 27 ~i~~~~~~~nl~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~~W~p~~ 105 (201)
T 3k9o_A 27 QIKVDLVDENFTELRGEIA-GPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAM 105 (201)
T ss_dssp SEEEEECSTTSSEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTC
T ss_pred CEEEEECCCCccEEEEEEE-CCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCcccccCCCCCC
Confidence 4555666779999999997 999999999999999999999999999999999999999995 99999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++|+..
T Consensus 106 ~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 106 TLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999863
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.3e-44 Score=266.56 Aligned_cols=128 Identities=38% Similarity=0.609 Sum_probs=122.3
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|+++|+++|. ||+||||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++
T Consensus 67 gi~~~p~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~t 145 (194)
T 3bzh_A 67 NCSAGPKGDNIYEWRSTIL-GPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALT 145 (194)
T ss_dssp TEEEEESSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCC
T ss_pred CceeecccCccccceEEEe-CCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhccCCCcCc
Confidence 4555666788999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|+++|+.
T Consensus 146 i~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 146 ISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999873
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3e-44 Score=257.80 Aligned_cols=123 Identities=37% Similarity=0.730 Sum_probs=118.2
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCC--cCCCccCHHHH
Q 032578 13 KQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN--QWSPIYDVAAI 90 (137)
Q Consensus 13 ~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~--~W~p~~~i~~i 90 (137)
.++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.. +|+|+++|.+|
T Consensus 37 ~~~nl~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~v 115 (161)
T 2grr_A 37 GTMNLMNWECAIP-GKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQI 115 (161)
T ss_dssp SCEEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHH
T ss_pred CCCCccEEEEEEE-CCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHH
Confidence 3579999999997 99999999999999999999999999999999999999999999999999975 79999999999
Q ss_pred HHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 91 LTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 91 l~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
|.+|+++|.+|++++|+|.+||.+|++|+++|+++||+++++|+.+
T Consensus 116 l~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 116 LLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp HHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999864
No 25
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.1e-44 Score=270.64 Aligned_cols=128 Identities=34% Similarity=0.666 Sum_probs=121.7
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceec-CCCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~~~W~p~~ 85 (137)
+|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|.++|+|++
T Consensus 42 gi~~~p~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ 120 (216)
T 2pwq_A 42 EIDAHIKDSNFFEWVGFIK-GPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPAL 120 (216)
T ss_dssp TEEEEECSSCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHHHCCTTC
T ss_pred CEEEEEcCCccceeEEEEe-CCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcccCCCCC
Confidence 3555566778999999997 99999999999999999999999999999999999999999 589999999998999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|+++++.
T Consensus 121 ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~ 170 (216)
T 2pwq_A 121 TIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFAT 170 (216)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999985
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.8e-44 Score=261.05 Aligned_cols=129 Identities=36% Similarity=0.661 Sum_probs=120.9
Q ss_pred eeeec-CCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCC-------
Q 032578 7 DCLLD-IKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ------- 78 (137)
Q Consensus 7 ~~~~d-~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~------- 78 (137)
+|.+. .+++|+++|++.|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|+||+++|.
T Consensus 26 gi~~~~~~~~nl~~W~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~ 104 (183)
T 3rz3_A 26 GFRVTLVDEGDLYNWEVAIF-GPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQ 104 (183)
T ss_dssp TEEEEECTTCCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------
T ss_pred CEEEEecCccchhheeeeee-CCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCccccccc
Confidence 34455 56778999999997 9999999999999999999999999999999999999999999999999996
Q ss_pred ------CcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHH------CHHHHHHHHHHHHHHHHhc
Q 032578 79 ------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE------NKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 79 ------~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~------~~~~f~~~~~~~~~k~~~~ 136 (137)
++|+|+++|++||++|+++|.+|++++|+|.+||.+|++ |+++|+++||+++++++++
T Consensus 105 ~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~~ 174 (183)
T 3rz3_A 105 SGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVD 174 (183)
T ss_dssp ------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999 7899999999999999875
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=7.2e-44 Score=254.38 Aligned_cols=127 Identities=23% Similarity=0.501 Sum_probs=120.4
Q ss_pred eee-cCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccC-CCcCCCcc
Q 032578 8 CLL-DIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-QNQWSPIY 85 (137)
Q Consensus 8 ~~~-d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l-~~~W~p~~ 85 (137)
|.+ ...++|+++|+++| . |++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++| .++|+|++
T Consensus 24 i~~~~~~~~~l~~w~~~I-~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~~W~p~~ 101 (155)
T 1wzv_A 24 LRNLSSDDANVLVWHALL-L-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCT 101 (155)
T ss_dssp EEEEEECSSCTTEEEEEE-C-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCTTTCCTTC
T ss_pred EEEEecCCCchheEEEEE-c-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCccCCCCCC
Confidence 444 45667899999999 5 99999999999999999999999999999999999999999999999999 78999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+++++++..
T Consensus 102 ~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 102 KTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp CHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred cHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999863
No 28
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.9e-43 Score=254.95 Aligned_cols=127 Identities=23% Similarity=0.481 Sum_probs=118.6
Q ss_pred eeeec-CCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCC------
Q 032578 7 DCLLD-IKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN------ 79 (137)
Q Consensus 7 ~~~~d-~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~------ 79 (137)
+|.+. .++++++.|++.| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|..
T Consensus 33 gi~~~~~~~~~l~~w~~~i--gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~ 110 (167)
T 3fn1_B 33 TCKVHFPDPNKLHCFQLTV--TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGT 110 (167)
T ss_dssp TEEEECSSSSCTTEEEEEE--CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTT
T ss_pred CEEEEeCCCCcceeEEEEE--CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccCCCCCC
Confidence 34454 3456789999988 89999999999999999999999999999999999999999999999999975
Q ss_pred cCCCccCHHHHHHHHHHhhcC-CCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 80 QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 80 ~W~p~~~i~~il~~l~~ll~~-p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
+|+|+++|.+||.+|+++|.+ |++++|+|.+||++|++|+++|+++||+|+++||+
T Consensus 111 ~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 111 GWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp SBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 799999999999999999999 69999999999999999999999999999999974
No 29
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.2e-43 Score=268.86 Aligned_cols=129 Identities=29% Similarity=0.578 Sum_probs=122.7
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~~ 85 (137)
++.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.++|+|++
T Consensus 79 gi~v~p~~dnl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~ 157 (253)
T 3e46_A 79 QIKVDLVDENFTELRGEIA-GPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAM 157 (253)
T ss_dssp SEEEEECSTTSSEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTC
T ss_pred CEEEEECCCcccEEEEEEE-CCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCCC
Confidence 4555666779999999997 999999999999999999999999999999999999999994 89999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
+|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++|+..
T Consensus 158 ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 158 TLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999863
No 30
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.8e-43 Score=255.20 Aligned_cols=122 Identities=23% Similarity=0.512 Sum_probs=117.8
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEee-ccccceec-CCCcEEeccCC-CcCCCccCHHH
Q 032578 13 KQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVS-RMFHPNIY-ADGSICLDILQ-NQWSPIYDVAA 89 (137)
Q Consensus 13 ~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t-~i~HPnv~-~~G~icl~~l~-~~W~p~~~i~~ 89 (137)
.++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.| ++|||||+ .+|.||+++|. ++|+|+++|.+
T Consensus 43 ~~~nl~~w~~~I~-Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~ 121 (172)
T 2y9m_A 43 DETDLSKWEAIIS-GPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLH 121 (172)
T ss_dssp STTCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHH
T ss_pred CCCchhEEEEEEE-CCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHH
Confidence 5678999999997 999999999999999999999999999999999 99999996 79999999998 88999999999
Q ss_pred HHHHHHHhhcCCCCCCCcCHHHHHHHHH-CHHHHHHHHHHHHHHHHh
Q 032578 90 ILTSIQSLLCDPNPNSPANSEAARMFSE-NKREYNRRVREIVEQSWT 135 (137)
Q Consensus 90 il~~l~~ll~~p~~~~p~n~~aa~~~~~-~~~~f~~~~~~~~~k~~~ 135 (137)
||.+|+++|.+|++++|+|.+||++|++ |+++|+++||+|+++++.
T Consensus 122 vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 122 CVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp HHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 999999999999999874
No 31
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-43 Score=252.51 Aligned_cols=125 Identities=29% Similarity=0.628 Sum_probs=118.0
Q ss_pred eeeec-CCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCcc
Q 032578 7 DCLLD-IKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d-~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~ 85 (137)
+|.+. ..++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++
T Consensus 23 ~~~~~~~~~~~l~~w~~~i--gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~ 100 (160)
T 1y8x_A 23 TCDISFSDPDDLLNFKLVI--CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVL 100 (160)
T ss_dssp TEEEECSSTTCTTEEEEEE--CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTC
T ss_pred CeEEEeccCCccceEEEEE--CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccchhhccCCC
Confidence 34454 4678899999987 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHH
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 133 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~ 133 (137)
++.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||++++..
T Consensus 101 ~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 101 TINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp CHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSE
T ss_pred CHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998753
No 32
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=260.09 Aligned_cols=120 Identities=30% Similarity=0.662 Sum_probs=116.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCccCHHHHHHH
Q 032578 15 VFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTS 93 (137)
Q Consensus 15 ~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~~~i~~il~~ 93 (137)
+++++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|+++|.+||.+
T Consensus 48 ddl~~W~~~I~-GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s 126 (179)
T 2z5d_A 48 GGLNEFVVKFY-GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFES 126 (179)
T ss_dssp EETTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTTHHHHT
T ss_pred CCCceeEEEEE-CCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEeccccccCCCCCCCHHHHHHH
Confidence 45799999997 999999999999999999999999999999999999999998 9999999999899999999999999
Q ss_pred -HHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 94 -IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 94 -l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
|+++|.+|++++|+|.+||++|++|+++|+++||+|+++++.
T Consensus 127 ~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~ 169 (179)
T 2z5d_A 127 FLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 169 (179)
T ss_dssp HHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999875
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=4.4e-44 Score=267.22 Aligned_cols=128 Identities=30% Similarity=0.576 Sum_probs=120.1
Q ss_pred eeeecCCcc-eEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecC-CCcEEeccCCCcCCCc
Q 032578 7 DCLLDIKQV-FILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPI 84 (137)
Q Consensus 7 ~~~~d~~~~-~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~icl~~l~~~W~p~ 84 (137)
+|.+...++ ++..|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+. +|.||+++|.++|+|+
T Consensus 21 gi~~~p~~~~~l~~w~~~I~-GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~ 99 (215)
T 1tte_A 21 HITLEFVSESDIHHLKGTFL-GPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRNAWSPV 99 (215)
T ss_dssp TCEECCCSSSSCCEEEEECC-EEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTCCSCTT
T ss_pred CEEEEECCCccccccEEEEe-CCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCCCCCCc
Confidence 345555444 4569999996 999999999999999999999999999999999999999998 9999999999999999
Q ss_pred cCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 85 YDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 85 ~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
+||.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||+|+++|+.
T Consensus 100 ~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~ 150 (215)
T 1tte_A 100 ITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 150 (215)
T ss_dssp CCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSC
T ss_pred CcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999885
No 34
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-43 Score=255.23 Aligned_cols=123 Identities=28% Similarity=0.537 Sum_probs=115.7
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecccccee-cCCCcEEeccCC--CcCCCc
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQ--NQWSPI 84 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv-~~~G~icl~~l~--~~W~p~ 84 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++||||| +.+|.||+++|. ++|+|+
T Consensus 43 i~~~p~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~ 121 (169)
T 1yrv_A 43 ITAKPVSEDMMEWEVEIE-GLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTN 121 (169)
T ss_dssp EEEEECSTTSCEEEEEEE-CCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTT
T ss_pred EEEEEcCCccccceeEEE-CCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCCcCCCCc
Confidence 445556678999999997 9999999999999999999999999999999999999999 789999999998 789999
Q ss_pred cCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHH
Q 032578 85 YDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 132 (137)
Q Consensus 85 ~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k 132 (137)
++|.+||.+|+++|.+|++++|+|.+||++|++|+++|+++ |+++++
T Consensus 122 ~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 122 YTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 99999999999999999999999999999999999999999 888765
No 35
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.9e-43 Score=254.40 Aligned_cols=125 Identities=28% Similarity=0.599 Sum_probs=118.3
Q ss_pred eeeec-CCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCcc
Q 032578 7 DCLLD-IKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d-~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~ 85 (137)
+|.+. ..++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|++
T Consensus 43 ~i~~~~p~~~nl~~W~~~i--gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~~W~p~~ 120 (180)
T 2nvu_C 43 TCDISFSDPDDLLNFKLVI--CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILREDWKPVL 120 (180)
T ss_dssp TEEEECSSTTCTTEEEEEE--CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTTSCCTTC
T ss_pred CeEEEecccccccceEEEE--CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccccCCCCC
Confidence 34554 5678899999987 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHH
Q 032578 86 DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 133 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~ 133 (137)
+|.+||.+|+++|.+|++++|+|.+||.+|++|+++|+++||++++.+
T Consensus 121 ~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 121 TINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred CHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998864
No 36
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-43 Score=255.06 Aligned_cols=121 Identities=31% Similarity=0.625 Sum_probs=116.7
Q ss_pred cceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceec-CCCcEEeccCCCcCCCccCHHHHHH
Q 032578 14 QVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQNQWSPIYDVAAILT 92 (137)
Q Consensus 14 ~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~~~W~p~~~i~~il~ 92 (137)
++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+ .+|.||+++|.++|+|++++.+||.
T Consensus 34 ~~~l~~w~~~I~-GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~~W~p~~~i~~vL~ 112 (171)
T 1yf9_A 34 SDTVAEFWVEFK-GPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFD 112 (171)
T ss_dssp CSSTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTHHHHH
T ss_pred CCCceEEEEEEE-CCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEeccccccCCCCCCcHHHHHH
Confidence 567999999997 99999999999999999999999999999999999999999 5999999999989999999999999
Q ss_pred HH-HHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHh
Q 032578 93 SI-QSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 135 (137)
Q Consensus 93 ~l-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~ 135 (137)
+| ++||.+|++++|+|.+||.+|++|+++|+++||+++++++.
T Consensus 113 sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~ 156 (171)
T 1yf9_A 113 VFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHAT 156 (171)
T ss_dssp THHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 97 79999999999999999999999999999999999999875
No 37
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=4.9e-43 Score=249.80 Aligned_cols=124 Identities=24% Similarity=0.614 Sum_probs=116.4
Q ss_pred cCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCC-CcCCCccCHHH
Q 032578 11 DIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-NQWSPIYDVAA 89 (137)
Q Consensus 11 d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~-~~W~p~~~i~~ 89 (137)
...++|+++|+++| +|++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|. ++|+|++++.+
T Consensus 26 ~~~~~~l~~w~~~i--~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~W~p~~~i~~ 103 (154)
T 1c4z_D 26 QVDEANLLTWQGLI--VPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQ 103 (154)
T ss_dssp CSSCSSSSEEEEEE--CCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSSSSCCTTCCHHH
T ss_pred eCCCCchheEEEEE--eCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCCCCCCCCCcHHH
Confidence 34667899999999 3999999999999999999999999999999999999999999999999996 78999999999
Q ss_pred HHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 90 ILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 90 il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
||.+|+++|.+|++++|+|.+||++|++|+++|+++||+++++++..
T Consensus 104 vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 104 VIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp HHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred HHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999998863
No 38
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.3e-43 Score=254.79 Aligned_cols=121 Identities=35% Similarity=0.703 Sum_probs=86.7
Q ss_pred eeecCC-cceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCC--------
Q 032578 8 CLLDIK-QVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ-------- 78 (137)
Q Consensus 8 ~~~d~~-~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~-------- 78 (137)
|.+... ++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+||+++|.
T Consensus 37 i~~~p~~~~nl~~W~~~I~-GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~ 115 (172)
T 2awf_A 37 FSAGLIDDNDLYRWEVLII-GPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYG 115 (172)
T ss_dssp EEEEESSTTCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC------
T ss_pred EEEEECCCccccccEEEEe-CCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCccccccc
Confidence 444443 368999999997 9999999999999999999999999999999999999999999999999996
Q ss_pred -----CcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHH-HHHHHHHHH
Q 032578 79 -----NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREI 129 (137)
Q Consensus 79 -----~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~-~f~~~~~~~ 129 (137)
++|+|+++|++||.+|+++|.+|++++|+|.+||++|++|++ +|+++||+|
T Consensus 116 ~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 116 YEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp ---CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred ccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 579999999999999999999999999999999999999999 999999975
No 39
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=5.2e-42 Score=251.98 Aligned_cols=120 Identities=32% Similarity=0.604 Sum_probs=115.3
Q ss_pred CCcceEE---EEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCHH
Q 032578 12 IKQVFIL---TYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVA 88 (137)
Q Consensus 12 ~~~~~~~---~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i~ 88 (137)
.+++|++ +|+++| +|++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+++|.
T Consensus 55 p~~~nl~~~~~w~~~I--~p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~ 132 (190)
T 3o2u_A 55 PDSADRSQSPKLEVIV--RPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQ 132 (190)
T ss_dssp TTCCCTTSCCEEEEEE--CCSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHH
T ss_pred CCCccCCcCCeEEEEE--cCCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccCCCCCCCCHH
Confidence 5677899 999999 47889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHH
Q 032578 89 AILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 133 (137)
Q Consensus 89 ~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~ 133 (137)
+||.+|+++|.+|++++|+|.+||++|++|+++|+++||+|++.+
T Consensus 133 ~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 133 SIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp HHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred HHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999754
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=3e-41 Score=271.72 Aligned_cols=129 Identities=40% Similarity=0.723 Sum_probs=123.5
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccC
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~ 86 (137)
+|.+...++|++.|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+++|.||+++|.++|+|+++
T Consensus 22 ~~~~~p~~~nl~~w~~~i~-Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~ 100 (399)
T 4ddg_A 22 QCSAGPVGDDMFHWQATIM-GPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILRSQWSPALT 100 (399)
T ss_dssp SEEEEEETTEEEEEEEEEE-CCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGTTSCCTTCC
T ss_pred CEEEEEcCCcceEEEEEEE-CCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCcccccCCCcccc
Confidence 4566666789999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 87 VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 87 i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
+.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+|+++++..
T Consensus 101 i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 101 ISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp HHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999853
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=8.5e-40 Score=235.87 Aligned_cols=121 Identities=21% Similarity=0.538 Sum_probs=111.7
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCC--CCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNS--SGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPI 84 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYe--gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~ 84 (137)
++.+...++|+++|+++|. ||++|||+ ||.|+++|.||++||++||+|+|.|++|||||+.+|.||+++|.++|+|+
T Consensus 39 ~i~~~~~~~nl~~w~~~i~-Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~ 117 (167)
T 4ds2_A 39 TAIFSVDTDTIYNWILKVK-APADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPD 117 (167)
T ss_dssp CEEEEEEESSTTEEEEEEE-CCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTT
T ss_pred cEEEEeCCCcccEEEEEEE-CCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCcCCCCCC
Confidence 3455667789999999997 99999999 99999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHH-HHHHhhcC--CCCCCCcCHHHHHHHHHCHHHHHHHHHH
Q 032578 85 YDVAAILT-SIQSLLCD--PNPNSPANSEAARMFSENKREYNRRVRE 128 (137)
Q Consensus 85 ~~i~~il~-~l~~ll~~--p~~~~p~n~~aa~~~~~~~~~f~~~~~~ 128 (137)
+++.++|+ .|++++.+ |++++|+|.|||++|++|+++|+++||+
T Consensus 118 ~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 118 QHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp SCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 99999754 67788875 8899999999999999999999999984
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.4e-38 Score=226.01 Aligned_cols=104 Identities=21% Similarity=0.440 Sum_probs=96.6
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcE---EeccCCCcCCCccCHHH
Q 032578 13 KQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSI---CLDILQNQWSPIYDVAA 89 (137)
Q Consensus 13 ~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~i---cl~~l~~~W~p~~~i~~ 89 (137)
++.|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+|+| |+++|+ +|+|+++|++
T Consensus 50 ~d~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~ 127 (156)
T 2q0v_A 50 DDITLSNWSCTIF-GQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILK-NWNRNYTIET 127 (156)
T ss_dssp TCTTCCEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHH
T ss_pred ccccceeeEEEEE-CCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhccccc-CCCCcCcHHH
Confidence 3457999999997 9999999999999999999999999999999999999999999999 888886 6999999999
Q ss_pred HHHHHHHhhcCCCCCCCcCHHHHHHHHHC
Q 032578 90 ILTSIQSLLCDPNPNSPANSEAARMFSEN 118 (137)
Q Consensus 90 il~~l~~ll~~p~~~~p~n~~aa~~~~~~ 118 (137)
||.+|+++|.+|++++|+|.+||.+|++|
T Consensus 128 vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 128 ILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp HHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred HHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999999999999999998765
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=243.10 Aligned_cols=124 Identities=28% Similarity=0.554 Sum_probs=114.8
Q ss_pred ecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeec-----cccceecCCCcEEeccCC------
Q 032578 10 LDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSR-----MFHPNIYADGSICLDILQ------ 78 (137)
Q Consensus 10 ~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~-----i~HPnv~~~G~icl~~l~------ 78 (137)
+...++++..|+++|. ||++|||+||+|+++|.||++||++||+|+|.|+ +|||||+.+|.||+++|.
T Consensus 102 v~~~ednl~~w~~~I~-GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~ 180 (323)
T 3ceg_A 102 VRCDEERLDIMKVLIT-GPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRP 180 (323)
T ss_dssp EEEESSCTTEEEEEEE-BCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCG
T ss_pred ecccCCCccccEEEEe-CCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCC
Confidence 3345678999999997 9999999999999999999999999999999998 999999999999999997
Q ss_pred -CcCCCcc-CHHHHHHHHHHhhc--CCCCCCCcCHHH--HHHHHHCHHHHHHHHHHHHHHHH
Q 032578 79 -NQWSPIY-DVAAILTSIQSLLC--DPNPNSPANSEA--ARMFSENKREYNRRVREIVEQSW 134 (137)
Q Consensus 79 -~~W~p~~-~i~~il~~l~~ll~--~p~~~~p~n~~a--a~~~~~~~~~f~~~~~~~~~k~~ 134 (137)
++|+|++ +|.+||.+|++||. +|++++|+|.++ +.++++|+++|+++||+++++++
T Consensus 181 ~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A 242 (323)
T 3ceg_A 181 EEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWA 242 (323)
T ss_dssp GGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHh
Confidence 6899998 89999999999997 677799999987 67899999999999999999976
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-36 Score=207.98 Aligned_cols=97 Identities=29% Similarity=0.611 Sum_probs=87.1
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecc-ccceecCCCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnv~~~G~icl~~l~~~W~p~~ 85 (137)
+|.+...++|+++|+++|. ||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|.++|+|++
T Consensus 25 ~~~~~~~~~~l~~w~~~i~-GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~~~W~P~~ 103 (125)
T 2fo3_A 25 NCTLDVHPNNIRIWIVKYV-GLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSL 103 (125)
T ss_dssp TEEEEECTTCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGTTTCCTTC
T ss_pred CEEEEeCcchhhhhheEEe-CCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcCCCCCCCC
Confidence 4555566789999999997 99999999999999999999999999999999996 999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCCC
Q 032578 86 DVAAILTSIQSLLCDPNPN 104 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~~ 104 (137)
++++||.+|+++|.+|+.+
T Consensus 104 ~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 104 SISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp CHHHHHHHHHHHHC-----
T ss_pred cHHHHHHHHHHHHhCcccc
Confidence 9999999999999999875
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.1e-37 Score=217.10 Aligned_cols=101 Identities=18% Similarity=0.464 Sum_probs=94.5
Q ss_pred CcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCC-CcE--EeccCCCcCCCccCHHH
Q 032578 13 KQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD-GSI--CLDILQNQWSPIYDVAA 89 (137)
Q Consensus 13 ~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~-G~i--cl~~l~~~W~p~~~i~~ 89 (137)
++.|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+.+ |+| |+++|+ +|+|++++++
T Consensus 35 ~d~nl~~w~~~i~-GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~ 112 (138)
T 1jat_B 35 DDITMTKWNGTIL-GPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMET 112 (138)
T ss_dssp TCTTCCEEEEEEE-CCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHH
T ss_pred CCCcceEEEEEEE-CCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC-CCCCcCcHHH
Confidence 3447999999997 9999999999999999999999999999999999999999986 999 899885 8999999999
Q ss_pred HHHHHHHhhcCCCCCCCcCHHHHHHH
Q 032578 90 ILTSIQSLLCDPNPNSPANSEAARMF 115 (137)
Q Consensus 90 il~~l~~ll~~p~~~~p~n~~aa~~~ 115 (137)
||.+|+++|.+|++++|+|++||.+|
T Consensus 113 vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 113 LLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp HHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred HHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 99999999999999999999988653
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.7e-36 Score=214.80 Aligned_cols=96 Identities=20% Similarity=0.445 Sum_probs=92.3
Q ss_pred eEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceec-CCCcEEeccCC--CcCCCccCHHHHHH
Q 032578 16 FILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQ--NQWSPIYDVAAILT 92 (137)
Q Consensus 16 ~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~--~~W~p~~~i~~il~ 92 (137)
|+++|+++|. ||++||||||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|. ++|+|+++|++||.
T Consensus 57 ~l~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~ 135 (160)
T 2a4d_A 57 TLTRWTGMII-GPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQ 135 (160)
T ss_dssp TCCEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHH
T ss_pred cceeeEEEEE-CCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHH
Confidence 5999999997 99999999999999999999999999999999999999999 69999999997 88999999999999
Q ss_pred HHHHhhc-CCCCCCCcCHHHH
Q 032578 93 SIQSLLC-DPNPNSPANSEAA 112 (137)
Q Consensus 93 ~l~~ll~-~p~~~~p~n~~aa 112 (137)
+|+++|. +|+.++|+|.|||
T Consensus 136 sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 136 ELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp HHHHHHTSTTTTTCCCCCTTC
T ss_pred HHHHHHccCCCCCCCCChhhc
Confidence 9999996 6999999999987
No 47
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-35 Score=207.23 Aligned_cols=96 Identities=26% Similarity=0.608 Sum_probs=90.1
Q ss_pred eeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeecc-ccceecCCCcEEeccCCCcCCCcc
Q 032578 7 DCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRM-FHPNIYADGSICLDILQNQWSPIY 85 (137)
Q Consensus 7 ~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnv~~~G~icl~~l~~~W~p~~ 85 (137)
+|.+...++|+++|++.|. ||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.+|+||+++|.++|+|++
T Consensus 39 ~~~~~~~~~nl~~W~~~I~-GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~~~WsP~~ 117 (136)
T 2h2y_A 39 NCTIDVHPSNIRIWIVQYV-GLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLGDDYNPSL 117 (136)
T ss_dssp TEEEEECTTCTTEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGTTTCCTTC
T ss_pred CeEEEeccccccccEEEEE-CCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccccCCCCCCC
Confidence 4555566789999999997 99999999999999999999999999999999996 999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCC
Q 032578 86 DVAAILTSIQSLLCDPNP 103 (137)
Q Consensus 86 ~i~~il~~l~~ll~~p~~ 103 (137)
++.+||.+|+++|.+|+.
T Consensus 118 ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 118 SISGLILSIISMLSSAKE 135 (136)
T ss_dssp CHHHHHHHHHHHHSSSCC
T ss_pred cHHHHHHHHHHHHhCcCc
Confidence 999999999999999875
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=5.1e-36 Score=216.57 Aligned_cols=97 Identities=20% Similarity=0.446 Sum_probs=92.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceec-CCCcEEeccCC--CcCCCccCHHHHH
Q 032578 15 VFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY-ADGSICLDILQ--NQWSPIYDVAAIL 91 (137)
Q Consensus 15 ~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~~G~icl~~l~--~~W~p~~~i~~il 91 (137)
.|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|++|||||+ .+|+||+++|. ++|+|+++|++||
T Consensus 66 ~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL 144 (170)
T 2hlw_A 66 MTLTRWTGMII-GPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVL 144 (170)
T ss_dssp SSCCBEEEEEC-CCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHH
T ss_pred ccceeeEEEEe-CCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHH
Confidence 35999999996 99999999999999999999999999999999999999999 79999999997 8899999999999
Q ss_pred HHHHHhhc-CCCCCCCcCHHHH
Q 032578 92 TSIQSLLC-DPNPNSPANSEAA 112 (137)
Q Consensus 92 ~~l~~ll~-~p~~~~p~n~~aa 112 (137)
.+|+++|. .|+.++|+|.|||
T Consensus 145 ~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 145 QELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp HHHHHHHHSTTTSSSCCCSSCC
T ss_pred HHHHHHHccCCCCCCCCCcccc
Confidence 99999997 5999999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-34 Score=201.16 Aligned_cols=87 Identities=33% Similarity=0.613 Sum_probs=83.7
Q ss_pred CCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccc--cceecCCCcEEeccCCCcCCCccCHHH
Q 032578 12 IKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMF--HPNIYADGSICLDILQNQWSPIYDVAA 89 (137)
Q Consensus 12 ~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPnv~~~G~icl~~l~~~W~p~~~i~~ 89 (137)
..++|+++|++.|. ||+|||||||.|+++|.||++||++||+|+|.|++| ||||+.+|+||+++|.++|+|++++++
T Consensus 48 ~~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~ 126 (136)
T 2a7l_A 48 SVQNSITQWIVDME-GAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQS 126 (136)
T ss_dssp CCCCSCEEEEEEEE-CCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHH
T ss_pred eCccccceeEEEEE-CCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcCCCCCCCCcHHH
Confidence 56788999999997 999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHhhc
Q 032578 90 ILTSIQSLLC 99 (137)
Q Consensus 90 il~~l~~ll~ 99 (137)
||.+|+++|.
T Consensus 127 vL~sI~slL~ 136 (136)
T 2a7l_A 127 VCLSIISMLS 136 (136)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=7.8e-35 Score=213.12 Aligned_cols=120 Identities=20% Similarity=0.394 Sum_probs=105.8
Q ss_pred eeecCCcceEEEEEEEEecCC-CCCCCCC-----------CEEEEEEEeCCCCCCCCCeeEEeeccccc-eecCCCcEEe
Q 032578 8 CLLDIKQVFILTYHSHISHGK-FLILNSS-----------GTFKLTLQFTEDYPNKPPTVRFVSRMFHP-NIYADGSICL 74 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp-~~tpYeg-----------g~f~~~i~fp~~YP~~pP~v~f~t~i~HP-nv~~~G~icl 74 (137)
|.+...++|+++|+++|. || ++|||+| |.|+++|.||++||++||+|+|.|++||| ||+.+|.||+
T Consensus 50 ~~~~p~~dnl~~W~~~I~-Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL 128 (186)
T 1zuo_A 50 YSVELINDSLYDWHVKLQ-KVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCM 128 (186)
T ss_dssp EEEEEETTEEEEEEEEEC-CCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCC
T ss_pred EEEEEcCCccceeEEEEE-CCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEe
Confidence 555556679999999996 98 9999998 89999999999999999999999999999 6999999999
Q ss_pred ccCC-CcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHHhc
Q 032578 75 DILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 136 (137)
Q Consensus 75 ~~l~-~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~ 136 (137)
++|. ++|+|+++|++||.+|+++|.+|+.. ..++.++++|.+.+++++.+++-+
T Consensus 129 ~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~--------~~~~~~~~~Y~~~~~~~~~~~~~~ 183 (186)
T 1zuo_A 129 ELLTKQGWSSAYSIESVIMQINATLVKGKAR--------VQFGANKNQYNLARAQQSYNSIVQ 183 (186)
T ss_dssp GGGSTTTCCTTSCHHHHHHHHHHHHHHTTCE--------ECTTCCTTCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCcCcHHHHHHHHHHHHcCCChh--------HhhccCHHHHhHHHHHHHHHHHHH
Confidence 9997 68999999999999999999988653 234456788889999998887643
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-32 Score=200.95 Aligned_cols=114 Identities=21% Similarity=0.447 Sum_probs=90.3
Q ss_pred eeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccC---CCcCCCc
Q 032578 8 CLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL---QNQWSPI 84 (137)
Q Consensus 8 ~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l---~~~W~p~ 84 (137)
|.+...++|+++|+++|. ||++|||+||+|+++|.||++||++||+|+|.|+ |||++.+|+||+++| .+.|+|+
T Consensus 34 i~~~p~~~nl~~W~~~I~-GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~W~P~ 110 (187)
T 2f4w_A 34 ICAEPLPSNILEWHYVVR-GPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPA 110 (187)
T ss_dssp EEEEEETTEEEEEEEEEE-CCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC----------CCTT
T ss_pred EEEEEcCCccceeEEEEe-CCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCccCCCCc
Confidence 445556789999999997 9999999999999999999999999999999999 999999999999999 5789999
Q ss_pred cCHHHHHHHHHHhhcCCCCCCC---cCHHHHHHHHHCHHHHHH
Q 032578 85 YDVAAILTSIQSLLCDPNPNSP---ANSEAARMFSENKREYNR 124 (137)
Q Consensus 85 ~~i~~il~~l~~ll~~p~~~~p---~n~~aa~~~~~~~~~f~~ 124 (137)
++|.+||.+|+++|.+|+++.. .......++..+...|+.
T Consensus 111 ~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~ 153 (187)
T 2f4w_A 111 WSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNL 153 (187)
T ss_dssp CCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhh
Confidence 9999999999999999988643 233444455444444443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.88 E-value=3.3e-24 Score=152.59 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=72.7
Q ss_pred CCcceEEEEEEEEecCCCCCCCCCC----------EEEEEEEeCCCCCCCCCeeEEeec-cccceecCCCcEEeccC-CC
Q 032578 12 IKQVFILTYHSHISHGKFLILNSSG----------TFKLTLQFTEDYPNKPPTVRFVSR-MFHPNIYADGSICLDIL-QN 79 (137)
Q Consensus 12 ~~~~~~~~w~~~i~~Gp~~tpYegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~HPnv~~~G~icl~~l-~~ 79 (137)
..++|+..|++.+. ||.||+|+|| .|+++|.||++||.+||+|+|.++ ++||||+.+|+||++++ +.
T Consensus 50 p~k~n~~~W~~ii~-Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp 128 (172)
T 2z6o_A 50 NNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKP 128 (172)
T ss_dssp HHHHTTCCCEEEEE-CTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHH
T ss_pred cCccccceeEEeec-CCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccc
Confidence 34567889999996 9999999999 999999999999999999999998 99999999999999999 43
Q ss_pred ---cCCCccCHHHHHH
Q 032578 80 ---QWSPIYDVAAILT 92 (137)
Q Consensus 80 ---~W~p~~~i~~il~ 92 (137)
.|+|.++|.++|.
T Consensus 129 ~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 129 LWARNVPKFGLAHLMA 144 (172)
T ss_dssp HHHHHTTSCCHHHHHH
T ss_pred cccccCCccCHHHHHh
Confidence 4559999999884
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.81 E-value=2.9e-20 Score=132.76 Aligned_cols=89 Identities=22% Similarity=0.410 Sum_probs=77.5
Q ss_pred cCCcceEEEEEEEEecCCCCCCCCCCE---EEEEEEeCCCCCCCCCeeEEeec----------cc-cceecCCCcEEecc
Q 032578 11 DIKQVFILTYHSHISHGKFLILNSSGT---FKLTLQFTEDYPNKPPTVRFVSR----------MF-HPNIYADGSICLDI 76 (137)
Q Consensus 11 d~~~~~~~~w~~~i~~Gp~~tpYegg~---f~~~i~fp~~YP~~pP~v~f~t~----------i~-HPnv~~~G~icl~~ 76 (137)
|....+++.|.++| .++|+||. |.+.|.||++||++||.+.|.++ ++ ||||+++|+||+++
T Consensus 58 dG~~~~Ll~l~Gti-----pv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpy 132 (162)
T 3r3q_A 58 DGTPQLLLSIYGTI-----STGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPI 132 (162)
T ss_dssp TSCEEEEEEEEEEE-----ECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGG
T ss_pred CCChheEEEEECcc-----CccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcc
Confidence 44556788887666 47899999 88999999999999999987651 77 99999999999999
Q ss_pred CCCcCCC-ccCHHHHHHHHHHhhcCCCCCC
Q 032578 77 LQNQWSP-IYDVAAILTSIQSLLCDPNPNS 105 (137)
Q Consensus 77 l~~~W~p-~~~i~~il~~l~~ll~~p~~~~ 105 (137)
| .+|++ +.++.++|.+|+++|.+|+++.
T Consensus 133 L-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 133 L-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp G-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred c-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 9 57999 5899999999999999999874
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.63 E-value=2.8e-17 Score=114.77 Aligned_cols=59 Identities=17% Similarity=0.295 Sum_probs=55.7
Q ss_pred EEEEEEEecCCCCCCCCCC----------EEEEEEEeCCCCCCCCCeeEEeec-cccceecCCCcEEeccC
Q 032578 18 LTYHSHISHGKFLILNSSG----------TFKLTLQFTEDYPNKPPTVRFVSR-MFHPNIYADGSICLDIL 77 (137)
Q Consensus 18 ~~w~~~i~~Gp~~tpYegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~HPnv~~~G~icl~~l 77 (137)
-.|...+. ||.||+|+|+ .|++++.||.+||.+||.|+|.+. .+||+++.+|+||++++
T Consensus 58 ~dWf~~~s-n~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 58 SHWFHLES-NPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp CCCEEEEE-CTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT
T ss_pred CCeeeecC-CCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc
Confidence 46999996 9999999999 999999999999999999999995 89999999999999986
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.61 E-value=1.2e-15 Score=107.22 Aligned_cols=82 Identities=21% Similarity=0.415 Sum_probs=72.0
Q ss_pred CCcceEEEEEEEEecCCCCCCCCCCEEEE--EEEeCCCCCCCCCeeEEeec------cccceecCCCcEEeccCCCcCCC
Q 032578 12 IKQVFILTYHSHISHGKFLILNSSGTFKL--TLQFTEDYPNKPPTVRFVSR------MFHPNIYADGSICLDILQNQWSP 83 (137)
Q Consensus 12 ~~~~~~~~w~~~i~~Gp~~tpYegg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnv~~~G~icl~~l~~~W~p 83 (137)
....+++.|.++| + .+|+|+.|.+ .|.||++||++||.+ |.++ ..||||+.+|+||+++|. +|++
T Consensus 48 G~~~~LL~l~GtI-p----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~-~W~~ 120 (146)
T 3obq_A 48 TGSRELMNLTGTI-P----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH-EWKH 120 (146)
T ss_dssp STTCEEEEEEEEE-E----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH-TCCT
T ss_pred CChheEEEEEEEe-e----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc-ccCC
Confidence 4567899999999 2 5699999995 999999999999999 7766 589999999999999994 5988
Q ss_pred -ccCHHHHHHHHHHhhcC
Q 032578 84 -IYDVAAILTSIQSLLCD 100 (137)
Q Consensus 84 -~~~i~~il~~l~~ll~~ 100 (137)
..++.+++..++++|.+
T Consensus 121 ~~snL~~ll~~l~~~F~~ 138 (146)
T 3obq_A 121 PQSDLLGLIQVMIVVFGD 138 (146)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 68999999999999874
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.48 E-value=0.0093 Score=39.83 Aligned_cols=54 Identities=13% Similarity=0.236 Sum_probs=32.3
Q ss_pred EeeeeeeecCCcceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEee
Q 032578 3 IFNIDCLLDIKQVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVS 59 (137)
Q Consensus 3 ~~~~~~~~d~~~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t 59 (137)
||..++....... ..+.+.+. .-.+..-+.-.+.+.+.+|++||.+||.+...+
T Consensus 25 Iy~d~~~~~~~~~--~~~~i~i~-~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 25 IYPDSFTVLSENP--PSFTITVT-SEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HCSSSEEECCSSS--CEEEECCB-CCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HccCceEEccCCC--CEEEEEEe-cCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 5665554433222 33444442 111222234478899999999999999997654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.23 E-value=0.028 Score=37.99 Aligned_cols=25 Identities=24% Similarity=0.546 Sum_probs=21.4
Q ss_pred CCEEEEEEEeCCCCCCCCCeeEEee
Q 032578 35 SGTFKLTLQFTEDYPNKPPTVRFVS 59 (137)
Q Consensus 35 gg~f~~~i~fp~~YP~~pP~v~f~t 59 (137)
.-.+.+.+.+|++||..||.+...+
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred ceEEEEEEECCCCCCCCCCeEEEec
Confidence 3478899999999999999998654
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.07 E-value=0.07 Score=35.43 Aligned_cols=25 Identities=28% Similarity=0.566 Sum_probs=21.8
Q ss_pred CEEEEEEEeCCCCCCCCCeeEEeec
Q 032578 36 GTFKLTLQFTEDYPNKPPTVRFVSR 60 (137)
Q Consensus 36 g~f~~~i~fp~~YP~~pP~v~f~t~ 60 (137)
-.+.+.+.+|++||..+|.+...+.
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4788999999999999999987753
No 59
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.63 E-value=0.45 Score=32.74 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=20.7
Q ss_pred EEEEEEEeCCCCCCCCCeeEEee
Q 032578 37 TFKLTLQFTEDYPNKPPTVRFVS 59 (137)
Q Consensus 37 ~f~~~i~fp~~YP~~pP~v~f~t 59 (137)
.+.+.|.+|.+||..+|.+...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999997554
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.26 E-value=0.14 Score=33.95 Aligned_cols=39 Identities=13% Similarity=0.299 Sum_probs=26.3
Q ss_pred EEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEe
Q 032578 18 LTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFV 58 (137)
Q Consensus 18 ~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~ 58 (137)
..+.+.+. +.+..=..-.+.+.+.+|++||..+|.+...
T Consensus 40 ~~f~i~l~--~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 40 TVFRIHTK--AEGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp EEEEEEEE--CCTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred CeEEEEec--CCCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 45666663 2221111247899999999999999998644
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=93.71 E-value=0.21 Score=35.82 Aligned_cols=52 Identities=19% Similarity=0.365 Sum_probs=40.3
Q ss_pred CCCEEEEEEEeCCCCCCCCCeeEEeeccccceecCCCcEEeccCCCcCCCccCHHHHHHHHHHhhc
Q 032578 34 SSGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 99 (137)
Q Consensus 34 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~ 99 (137)
.|....++|.++.+||.++|.+...-|. |. .-.|.+..++.+++...+..+.
T Consensus 36 ~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------------~~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 36 SGREHLITLKLKAKYPAESPDYFVDFPV--PF------------CASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp TSCEEEEEEECCTTTTTSCCEEECCCSS--CC------------CCCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------------ccccCCCccHHHHHHHHHHHHH
Confidence 4778899999999999999988655553 11 2479999999998887766553
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=91.69 E-value=0.54 Score=32.11 Aligned_cols=25 Identities=24% Similarity=0.357 Sum_probs=21.1
Q ss_pred CEEEEEEEeCCCCCCCCCeeEEeec
Q 032578 36 GTFKLTLQFTEDYPNKPPTVRFVSR 60 (137)
Q Consensus 36 g~f~~~i~fp~~YP~~pP~v~f~t~ 60 (137)
-.+.+.+.+|.+||..||.+.....
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEECT
T ss_pred ceEEEEEECCCCCCCCCCeEEEEcc
Confidence 3688999999999999999976653
No 63
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.65 E-value=0.12 Score=34.66 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=20.4
Q ss_pred CEEEEEEEeCCCCCCCCCeeEEe
Q 032578 36 GTFKLTLQFTEDYPNKPPTVRFV 58 (137)
Q Consensus 36 g~f~~~i~fp~~YP~~pP~v~f~ 58 (137)
-.+.+.|.||++||..+|.+...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 46889999999999999999774
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=86.66 E-value=0.13 Score=33.81 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=0.0
Q ss_pred CCCCCCCcCHHHHHHHHHCHHHHHHHHHHHHHHHH
Q 032578 100 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 134 (137)
Q Consensus 100 ~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~k~~ 134 (137)
-.....|.+.++|++|+++++.|.+.+|.|+.-++
T Consensus 20 ~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a 54 (108)
T 2cwb_A 20 GETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDA 54 (108)
T ss_dssp -----------------------------------
T ss_pred CcccCCchhHHHHHHHHhchhccccccccccccCc
Confidence 34456799999999999999999999999994443
No 65
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=56.97 E-value=6.9 Score=26.52 Aligned_cols=19 Identities=16% Similarity=0.462 Sum_probs=11.7
Q ss_pred CCCcEEeccCCCcCCCccC
Q 032578 68 ADGSICLDILQNQWSPIYD 86 (137)
Q Consensus 68 ~~G~icl~~l~~~W~p~~~ 86 (137)
..|++.+--.+..|.|..|
T Consensus 73 ~pGkvtitgtsQ~WTPDLT 91 (162)
T 1f35_A 73 KPGKVTITGTSQNWTPDLT 91 (162)
T ss_dssp SSEEEEEEEBCTTCCTTTC
T ss_pred CCCeEEEEeeccccCcchH
Confidence 3466655445567888755
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=50.33 E-value=15 Score=30.24 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=26.0
Q ss_pred cCHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 032578 107 ANSEAARMFSENKREYNRRVREIVEQSWTAD 137 (137)
Q Consensus 107 ~n~~aa~~~~~~~~~f~~~~~~~~~k~~~~~ 137 (137)
.-.|+..+..+|++.|.+.|++...++.++|
T Consensus 276 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 306 (552)
T 2fkn_A 276 SLDEADRLRQDTPELYVRLAKQSMKKHVEAM 306 (552)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 3467777888999999999999999988764
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=50.02 E-value=15 Score=30.19 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=25.7
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 032578 108 NSEAARMFSENKREYNRRVREIVEQSWTAD 137 (137)
Q Consensus 108 n~~aa~~~~~~~~~f~~~~~~~~~k~~~~~ 137 (137)
-.|+..+..+|++.|.+.|++...++.++|
T Consensus 276 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv~am 305 (551)
T 1x87_A 276 LDEAAELRARDPKQYIARAKQSIAAHVRAM 305 (551)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 467777888999999999999999988764
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=49.63 E-value=16 Score=30.17 Aligned_cols=30 Identities=3% Similarity=-0.117 Sum_probs=25.7
Q ss_pred CHHHHHHHHHCHHHHHHHHHHHHHHHHhcC
Q 032578 108 NSEAARMFSENKREYNRRVREIVEQSWTAD 137 (137)
Q Consensus 108 n~~aa~~~~~~~~~f~~~~~~~~~k~~~~~ 137 (137)
-.|+..+..+|++.|.+.|++...++.++|
T Consensus 281 ~ee~~~l~~~dp~~~~~~~~~Sm~rhv~Am 310 (557)
T 1uwk_A 281 WEQYRDRAQTEPAAVVKAAKQSMAVHVQAM 310 (557)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 467777888999999999999999988764
No 69
>4g7w_A Putative uncharacterized protein; beta barrel, TOLA binding domain, selenomethionine-substitut protein, phage coat, protein binding; 2.90A {Vibrio cholerae}
Probab=41.85 E-value=6.4 Score=25.91 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=32.4
Q ss_pred eEeeeeeeecCCcceE-EEEEEEEecCCCCCCCCCCEEEEEEE--eCCCCCC
Q 032578 2 TIFNIDCLLDIKQVFI-LTYHSHISHGKFLILNSSGTFKLTLQ--FTEDYPN 50 (137)
Q Consensus 2 ~~~~~~~~~d~~~~~~-~~w~~~i~~Gp~~tpYegg~f~~~i~--fp~~YP~ 50 (137)
.|.-.+|++|+.++++ +.|.|.- -.++-|-.|.|+-++. ..+++|.
T Consensus 52 svlfdgcmldiekddygfvwscls---nengdyckglykprftqgvspnwpm 100 (160)
T 4g7w_A 52 SVLFDGCMLDIEKDDYGFVWSCLS---NENGDYCKGLYKPRFTQGVSPNWPM 100 (160)
T ss_dssp EEEETTEEEEECBCSSSBSEEEEE---CSSCEEEEEEEEECSCCCCCCCCCB
T ss_pred hhhhcceeEeeeccccceEEeeec---cCCcchhccccccccccCCCCCCCc
Confidence 3566789999998887 6798877 3566688888876554 3455554
No 70
>4g7x_A Putative uncharacterized protein; membrane, protein binding-protein binding complex; 1.44A {Vibrio cholerae}
Probab=40.72 E-value=5.3 Score=24.60 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=27.3
Q ss_pred eEeeeeeeecCCcceE-EEEEEEEecCCCCCCCCCCEEEEEE
Q 032578 2 TIFNIDCLLDIKQVFI-LTYHSHISHGKFLILNSSGTFKLTL 42 (137)
Q Consensus 2 ~~~~~~~~~d~~~~~~-~~w~~~i~~Gp~~tpYegg~f~~~i 42 (137)
.|.-.+|++|+.+++. +.|.|.-- .++-|-.|.|+-++
T Consensus 35 svlfdgcmldiekddygfvwsclsn---engdyckglykprf 73 (105)
T 4g7x_A 35 SVLFDGCMLDIEKDDYGFVWSCLSN---ENGDYCKGLYKPRF 73 (105)
T ss_dssp EEEETTEEEEECEETTEESEEEEEE---TTEEEEEEEEEECS
T ss_pred hheecceEEeeeccccceEEEeecc---CCcchhcccccccc
Confidence 3556789999988877 57988763 45567777776544
No 71
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=36.46 E-value=97 Score=21.27 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=28.9
Q ss_pred eeeeecCCcceEEEEEEEEecCCCCC-------------CCCCCEEEEEEEeCCCCCCC
Q 032578 6 IDCLLDIKQVFILTYHSHISHGKFLI-------------LNSSGTFKLTLQFTEDYPNK 51 (137)
Q Consensus 6 ~~~~~d~~~~~~~~w~~~i~~Gp~~t-------------pYegg~f~~~i~fp~~YP~~ 51 (137)
.+|..+.+++ ++|.++-. |-+.+ |-.-|.++|.+.-++=-|.+
T Consensus 29 fEc~e~L~~d--lewkliYV-gSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adpPd~~~ 84 (155)
T 1roc_A 29 FECLESLKHD--LEWKLTYV-GSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 84 (155)
T ss_dssp EEECSCCSSC--EEEEEEEC-CCTTSSCTTEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred EEEcccCCCC--cEEEEEEE-eCCCcccCceEeeEEEeccccceeEEEEEEcCCCCccc
Confidence 4566665554 88998886 55543 66679999988875544444
No 72
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=31.48 E-value=1.3e+02 Score=21.00 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=30.4
Q ss_pred eeeeecCCcceEEEEEEEEecCCCCC-------------CCCCCEEEEEEEeCCCCCCCCC
Q 032578 6 IDCLLDIKQVFILTYHSHISHGKFLI-------------LNSSGTFKLTLQFTEDYPNKPP 53 (137)
Q Consensus 6 ~~~~~d~~~~~~~~w~~~i~~Gp~~t-------------pYegg~f~~~i~fp~~YP~~pP 53 (137)
.+|.-+.+++ ++|.++-. |.+.+ |-.-|.++|.+.-+.=.+.+-|
T Consensus 34 fEcle~L~~d--leWkliYV-gSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP 91 (175)
T 2hue_A 34 FECLESLKHD--LEWKLTYV-GSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAELIP 91 (175)
T ss_dssp EEECSCCSSC--EEEEEEEE-SCTTCGGGEEEEEEEEECSCCSEEEEEEEEECCCCGGGSC
T ss_pred EEEcccCCCC--cEEEEEEE-cCCCCccCCeEeeEEEECCccceeEEEEEEcCCCChhhCC
Confidence 4566655544 78988886 66553 7778999999988654444433
No 73
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=30.50 E-value=1.3e+02 Score=21.06 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=29.1
Q ss_pred eeeeecCCcceEEEEEEEEecCCCCC-------------CCCCCEEEEEEEeCCCCCCC
Q 032578 6 IDCLLDIKQVFILTYHSHISHGKFLI-------------LNSSGTFKLTLQFTEDYPNK 51 (137)
Q Consensus 6 ~~~~~d~~~~~~~~w~~~i~~Gp~~t-------------pYegg~f~~~i~fp~~YP~~ 51 (137)
.+|.-+.+++ ++|.++-. |.+.+ |-.-|.++|.+.-++=-|..
T Consensus 30 fEcle~L~~d--leWkliYV-gSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adpPd~~~ 85 (179)
T 2idc_A 30 FECLESLKHD--LEWKLTYV-GSSRSLDHDQELDSILVGPVPVGVNKFVFSADPPSAEL 85 (179)
T ss_dssp EEECSCCSSC--EEEEEEEC-SCTTCGGGCEEEEEEEECSCCSEEEEEEEEECCCCGGG
T ss_pred EEEcccCCCC--cEEEEEEE-cCCCcccCCeEeeEEEECCccceeEEEEEEcCCCCccc
Confidence 4566655544 88998886 66554 67789999999875433333
No 74
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=28.74 E-value=1.5e+02 Score=20.69 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=34.4
Q ss_pred cceEEEEEEEEecCCCCCCCCCCEEEEEEEeCCCCCCCCCeeEEeeccc
Q 032578 14 QVFILTYHSHISHGKFLILNSSGTFKLTLQFTEDYPNKPPTVRFVSRMF 62 (137)
Q Consensus 14 ~~~~~~w~~~i~~Gp~~tpYegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 62 (137)
+...+.|.+.+. |+.+.--..-+=++...+.+.||. |...+..+-|
T Consensus 29 ~~~TH~WtVyVr-~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 29 AEHTHLWTIFVR-GPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TTCCEEEEEEEE-CGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCCcEEEEEEEE-CCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 457899999997 887765555677889999999975 6666655533
No 75
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=26.07 E-value=1.7e+02 Score=20.54 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=31.2
Q ss_pred eeeeecCCcceEEEEEEEEecCCCC-------------CCCCCCEEEEEEEeCCCCCCCCC
Q 032578 6 IDCLLDIKQVFILTYHSHISHGKFL-------------ILNSSGTFKLTLQFTEDYPNKPP 53 (137)
Q Consensus 6 ~~~~~d~~~~~~~~w~~~i~~Gp~~-------------tpYegg~f~~~i~fp~~YP~~pP 53 (137)
.+|..+.+++ ++|.++-. |-+. +|-.-|.++|.+.-++=-|.+-|
T Consensus 53 fEcle~L~~d--leWkliYV-GSa~s~~~DQ~Ldsv~VGPi~~G~~kFvfeadpPd~~kIP 110 (182)
T 2i32_A 53 FECIEDLSED--LEWKIIYV-GSAESEEYDQVLDSVLVGPVPAGRHMFVFQADAPNPGLIP 110 (182)
T ss_dssp EEESSCCSSC--EEEEEEEE-SCSSCGGGEEEEEEEEECCCCSEEEEEEEEECCCCGGGSC
T ss_pred EEEccccCCC--cEEEEEEE-cCCCCccCCeEeeEEEECCccceEEEEEEEeCCCCcccCC
Confidence 3455555443 78988876 5554 36778999999998765666666
No 76
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=22.79 E-value=67 Score=23.12 Aligned_cols=46 Identities=15% Similarity=0.025 Sum_probs=24.0
Q ss_pred ecCCCcEEeccCCCcCCCccCHHHHHHHHHHhhcCCCCCCCcCHHH
Q 032578 66 IYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 111 (137)
Q Consensus 66 v~~~G~icl~~l~~~W~p~~~i~~il~~l~~ll~~p~~~~p~n~~a 111 (137)
|+++|.|-...+..+....-+..+++..|+.+....--.+|.-.+|
T Consensus 143 ID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~~~~~~~~~~ 188 (224)
T 3keb_A 143 ADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAMAAEREAAEA 188 (224)
T ss_dssp ECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC----------
T ss_pred EcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhcccccChhhhhh
Confidence 4678888765444444444568888888888766444444433333
Done!