Your job contains 1 sequence.
>032581
MISIYVVFFILRNLFILSLNDEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPR
NKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKAEMQQSN
KDMRKNRKKEVEAEVTA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 032581
(137 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2082304 - symbol:AT3G01790 species:3702 "Arabi... 246 6.3e-21 1
UNIPROTKB|P66065 - symbol:rplM "50S ribosomal protein L13... 109 2.1e-06 1
POMBASE|SPBC16G5.04 - symbol:mrpl23 "mitochondrial riboso... 93 0.00010 1
TIGR_CMR|GSU_2876 - symbol:GSU_2876 "ribosomal protein L1... 87 0.00045 1
TIGR_CMR|BA_0143 - symbol:BA_0143 "ribosomal protein L13"... 86 0.00057 1
>TAIR|locus:2082304 [details] [associations]
symbol:AT3G01790 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 KO:K02871 TIGRFAMs:TIGR01066 HOGENOM:HOG000225288
OMA:FEITQVA EMBL:BT010192 EMBL:AK227266 IPI:IPI00520902
RefSeq:NP_186828.2 RefSeq:NP_850494.1 UniGene:At.41230
ProteinModelPortal:Q7XA68 SMR:Q7XA68 STRING:Q7XA68 PaxDb:Q7XA68
PRIDE:Q7XA68 EnsemblPlants:AT3G01790.1 EnsemblPlants:AT3G01790.2
GeneID:821078 KEGG:ath:AT3G01790 TAIR:At3g01790 InParanoid:Q7XA68
PhylomeDB:Q7XA68 ProtClustDB:PLN00205 Genevestigator:Q7XA68
Uniprot:Q7XA68
Length = 205
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 54/109 (49%), Positives = 62/109 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAV RMLP N IF G EHPFGD+PLEP
Sbjct: 97 YIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEP 156
Query: 89 YXXXXXXXXXXXXXXXXAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+ AMIR QKKAE ++ K KK +EV A
Sbjct: 157 FVMPPRRVREMRPRARRAMIRAQKKAEQAENEGTEVKKGKKRTLSEVPA 205
>UNIPROTKB|P66065 [details] [associations]
symbol:rplM "50S ribosomal protein L13" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0005829
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842583
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161
HOGENOM:HOG000225286 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B PIR:A70977 RefSeq:NP_217960.1
RefSeq:NP_338075.1 RefSeq:YP_006516932.1 ProteinModelPortal:P66065
SMR:P66065 PhosSite:P12061578 PRIDE:P66065
EnsemblBacteria:EBMYCT00000002385 EnsemblBacteria:EBMYCT00000071846
GeneID:13317050 GeneID:887584 GeneID:926638 KEGG:mtc:MT3548
KEGG:mtu:Rv3443c KEGG:mtv:RVBD_3443c PATRIC:18129537
TubercuList:Rv3443c OMA:FEITQVA ChEMBL:CHEMBL1933 Uniprot:P66065
Length = 147
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPFGDRPLEP 88
Y G L +RT+ E M+R P + KA+L MLP+N ++ G EHP + P
Sbjct: 80 YPGGLHKRTIGELMQRHPDRVVEKAILGMLPKNRLSRQIQRKLRVYAGPEHPHSAQQPVP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>POMBASE|SPBC16G5.04 [details] [associations]
symbol:mrpl23 "mitochondrial ribosomal protein subunit
L13 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR005822 InterPro:IPR005823
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
PomBase:SPBC16G5.04 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 eggNOG:COG0102
Gene3D:3.90.1180.10 PANTHER:PTHR11545 SUPFAM:SSF52161 KO:K02871
TIGRFAMs:TIGR01066 OMA:YTPHMDC HOGENOM:HOG000225288 PIR:T39596
RefSeq:NP_596753.1 ProteinModelPortal:O60118 STRING:O60118
EnsemblFungi:SPBC16G5.04.1 GeneID:2540088 KEGG:spo:SPBC16G5.04
OrthoDB:EOG46T69R NextBio:20801225 Uniprot:O60118
Length = 157
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 31 GHLKERTLKEQM-ERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGSEHPF 81
GHLKE T++E +R + +R+AV MLPRN I+ G+EHP+
Sbjct: 83 GHLKEWTMEEMAAKRGHKDLLRRAVGGMLPRNKLWDRRMKRLYIYDGAEHPY 134
>TIGR_CMR|GSU_2876 [details] [associations]
symbol:GSU_2876 "ribosomal protein L13" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005822
InterPro:IPR005823 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
SUPFAM:SSF52161 HSSP:O59300 KO:K02871 TIGRFAMs:TIGR01066
ProtClustDB:PRK09216 HAMAP:MF_01366_B OMA:MLPKTRL
RefSeq:NP_953918.1 ProteinModelPortal:Q748X4 SMR:Q748X4
GeneID:2688685 KEGG:gsu:GSU2876 PATRIC:22028613
HOGENOM:HOG000225288 BioCyc:GSUL243231:GH27-2865-MONOMER
Uniprot:Q748X4
Length = 143
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFPGS 77
L D+M + + G +K T + +E+ P + IRKAV MLP+N ++ G
Sbjct: 70 LADKMYYHHTGFPGGIKSITAGKLIEKKPEDLIRKAVKGMLPKNKLARHMLKKLKVYAGP 129
Query: 78 EHP 80
EHP
Sbjct: 130 EHP 132
>TIGR_CMR|BA_0143 [details] [associations]
symbol:BA_0143 "ribosomal protein L13" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005822 InterPro:IPR005823 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 Gene3D:3.90.1180.10
PANTHER:PTHR11545 SUPFAM:SSF52161 HSSP:O59300 HOGENOM:HOG000225286
KO:K02871 TIGRFAMs:TIGR01066 ProtClustDB:PRK09216 HAMAP:MF_01366_B
RefSeq:NP_842710.1 RefSeq:YP_016748.1 RefSeq:YP_026429.1
ProteinModelPortal:Q81VP9 SMR:Q81VP9 DNASU:1086446
EnsemblBacteria:EBBACT00000011142 EnsemblBacteria:EBBACT00000017416
EnsemblBacteria:EBBACT00000024437 GeneID:1086446 GeneID:2819438
GeneID:2851608 KEGG:ban:BA_0143 KEGG:bar:GBAA_0143 KEGG:bat:BAS0143
OMA:MLPKTRL BioCyc:BANT260799:GJAJ-154-MONOMER
BioCyc:BANT261594:GJ7F-156-MONOMER Uniprot:Q81VP9
Length = 145
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 19 LNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXXIFP 75
LND+ + YR+ H LK+RT E P + + A+ MLP+ ++
Sbjct: 70 LNDK--IYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYA 127
Query: 76 GSEHPFGDRPLEPY 89
G+EHP + E Y
Sbjct: 128 GAEHPHQAQKPEVY 141
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 137 110 0.00091 102 3 11 22 0.42 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 484 (52 KB)
Total size of DFA: 94 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.05u 0.19s 12.24t Elapsed: 00:00:00
Total cpu time: 12.05u 0.19s 12.24t Elapsed: 00:00:00
Start: Thu May 9 17:03:03 2013 End: Thu May 9 17:03:03 2013