BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032581
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224141259|ref|XP_002323992.1| predicted protein [Populus trichocarpa]
gi|222866994|gb|EEF04125.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/109 (81%), Positives = 97/109 (88%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFP SEHPFGDRPLEP
Sbjct: 96 YIGHLKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPDSEHPFGDRPLEP 155
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQ-QSNKDMRKNRKKEVEAEVT 136
YVMPPR+VRE+RPR RRAMIR QKKAE Q Q D RK +K+EVEAE+T
Sbjct: 156 YVMPPRQVREMRPRARRAMIRAQKKAEQQEQGGNDKRKGKKREVEAELT 204
>gi|449487903|ref|XP_004157858.1| PREDICTED: 50S ribosomal protein L13-like [Cucumis sativus]
Length = 204
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/111 (78%), Positives = 98/111 (88%), Gaps = 1/111 (0%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
RY+G+LKERTL+EQM RDPTE IRKAVLRMLP+NKLRDDRDRKLRIF G EHPFGDRPLE
Sbjct: 94 RYVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLE 153
Query: 88 PYVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRK-NRKKEVEAEVTA 137
PY+MPPR VRE+RP+VRRAMIR QK AE QQ+NK+ K +RKKE + EVTA
Sbjct: 154 PYIMPPRNVREMRPQVRRAMIRAQKMAEQQQNNKNEGKESRKKEEKVEVTA 204
>gi|255542936|ref|XP_002512531.1| 50S ribosomal protein L13, putative [Ricinus communis]
gi|223548492|gb|EEF49983.1| 50S ribosomal protein L13, putative [Ricinus communis]
Length = 202
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LKER+LK+Q+ +DPTE IRKAVLRMLPRNKLRDDRDRKLRIF GSEHPFGDRPLEP
Sbjct: 93 YVGNLKERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGSEHPFGDRPLEP 152
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQ-QSNKDMRKNRKKEVEAEVT 136
Y+MPPR VRE+RPR RRAMIR Q+KAE Q + +MRK RKKEVEAEV
Sbjct: 153 YIMPPRTVREIRPRARRAMIRAQRKAEQQVRGANEMRKGRKKEVEAEVA 201
>gi|118487043|gb|ABK95352.1| unknown [Populus trichocarpa]
Length = 205
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFP SEHPFGD+P+E
Sbjct: 96 YIGHLKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEA 155
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAE-MQQSNKDMRKNRKKEVEAEVT 136
YVMPPR+VRE+RPR +RAMIR QKKAE ++Q+ D RK +K+EVEA++T
Sbjct: 156 YVMPPRKVREMRPRAQRAMIRAQKKAEQLEQAGNDKRKGKKREVEADLT 204
>gi|224060221|ref|XP_002300092.1| predicted protein [Populus trichocarpa]
gi|222847350|gb|EEE84897.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFP SEHPFGD+P+E
Sbjct: 96 YIGHLKERSLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPDSEHPFGDQPVEA 155
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAE-MQQSNKDMRKNRKKEVEAEVT 136
YVMPPR+VRE+RPR +RAMIR QKKAE ++Q+ D RK +K+EVEA++T
Sbjct: 156 YVMPPRKVREMRPRAQRAMIRAQKKAEQLEQAGNDKRKGKKREVEADLT 204
>gi|255536973|ref|XP_002509553.1| 50S ribosomal protein L13, putative [Ricinus communis]
gi|223549452|gb|EEF50940.1| 50S ribosomal protein L13, putative [Ricinus communis]
Length = 202
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/109 (77%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LKER+LK+Q+ +DPTE IRKAVLRMLPRNKLRDDRDRKLRIF GSEHPFGDRPLE
Sbjct: 93 YVGNLKERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGSEHPFGDRPLES 152
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQ-QSNKDMRKNRKKEVEAEVT 136
Y+MPPR VRE+RPR RRAMIR QKKAE Q Q +M+K RKKEVE E+T
Sbjct: 153 YIMPPRTVREMRPRARRAMIRAQKKAEQQRQGANEMQKGRKKEVEVEIT 201
>gi|449448398|ref|XP_004141953.1| PREDICTED: 50S ribosomal protein L13-like [Cucumis sativus]
Length = 193
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/110 (78%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LKERTL+EQM RDPTE IRKAVLRMLP+NKLRDDRDRKLRIF G EHPFGDRPLEP
Sbjct: 84 YVGNLKERTLREQMTRDPTEVIRKAVLRMLPKNKLRDDRDRKLRIFAGDEHPFGDRPLEP 143
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRK-NRKKEVEAEVTA 137
Y+MPPR VRE+RP+VRRAMIR QK AE QQ+NK+ K +RKKE + EVTA
Sbjct: 144 YIMPPRNVREMRPQVRRAMIRAQKMAEQQQNNKNEGKESRKKEEKVEVTA 193
>gi|357469935|ref|XP_003605252.1| 50S ribosomal protein L13 [Medicago truncatula]
gi|355506307|gb|AES87449.1| 50S ribosomal protein L13 [Medicago truncatula]
Length = 200
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 88/98 (89%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLK+RTLK+QM +DPT+ IRKA+LRM+P+N LRDDRDRKLRIFPGSEHPFGDRPLEP
Sbjct: 91 YVGHLKQRTLKDQMAKDPTDVIRKAILRMIPKNNLRDDRDRKLRIFPGSEHPFGDRPLEP 150
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKN 126
YVMPPR VRE+RPR RRAMIR QKKAE QQ N + R+N
Sbjct: 151 YVMPPRTVREMRPRARRAMIRAQKKAEQQQENAEQRQN 188
>gi|357462507|ref|XP_003601535.1| 50S ribosomal protein L13 [Medicago truncatula]
gi|355490583|gb|AES71786.1| 50S ribosomal protein L13 [Medicago truncatula]
Length = 273
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 88/98 (89%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLK+RTLK+QM +DPT+ IRKA+LRM+P+N LRDDRDRKLRIFPGSEHPFGDRPLEP
Sbjct: 164 YVGHLKQRTLKDQMAKDPTDVIRKAILRMIPKNNLRDDRDRKLRIFPGSEHPFGDRPLEP 223
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKN 126
YVMPPR VRE+RPR RRAMIR QKKAE QQ N + R+N
Sbjct: 224 YVMPPRTVREMRPRARRAMIRAQKKAEQQQENAEQRQN 261
>gi|346472265|gb|AEO35977.1| hypothetical protein [Amblyomma maculatum]
Length = 202
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 92/109 (84%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHL+ER+LK+Q+ +DPTE IRKAVLRMLPRNKLRDDRDRKLRIF GSEHPFGDR LEP
Sbjct: 94 YVGHLRERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFTGSEHPFGDRSLEP 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
Y+MPPR+VRE+RPR RRA+IR QKKAE S ++ K +K++ +TA
Sbjct: 154 YIMPPRQVREMRPRARRALIRAQKKAEQSSSGTNITKKKKEDKVEAITA 202
>gi|226495273|ref|NP_001150488.1| LOC100284119 [Zea mays]
gi|195639580|gb|ACG39258.1| 50S ribosomal protein L13 [Zea mays]
gi|414879213|tpg|DAA56344.1| TPA: putative ribosomal protein L13 family protein [Zea mays]
Length = 199
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 91/109 (83%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G+EHPF DRPLEP
Sbjct: 94 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFSGNEHPFHDRPLEP 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAMIR QKK QQ+N+ + K AEVTA
Sbjct: 154 FVMPPRQVREMRPRARRAMIRAQKK---QQANRAKEEEDAKNAAAEVTA 199
>gi|414879214|tpg|DAA56345.1| TPA: putative ribosomal protein L13 family protein [Zea mays]
Length = 171
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/109 (74%), Positives = 91/109 (83%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G+EHPF DRPLEP
Sbjct: 66 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFSGNEHPFHDRPLEP 125
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAMIR QKK QQ+N+ + K AEVTA
Sbjct: 126 FVMPPRQVREMRPRARRAMIRAQKK---QQANRAKEEEDAKNAAAEVTA 171
>gi|297828568|ref|XP_002882166.1| ribosomal protein L13 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297328006|gb|EFH58425.1| ribosomal protein L13 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 88/109 (80%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAV RMLP N LR+DRDRKLRIF G EHPFGD+PLEP
Sbjct: 97 YIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRNDRDRKLRIFEGGEHPFGDKPLEP 156
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPRRVRE+RPR RRAMIR QKKAE ++ K KK ++VTA
Sbjct: 157 FVMPPRRVREMRPRARRAMIRAQKKAEQAENEGTEVKKGKKRTPSQVTA 205
>gi|30678423|ref|NP_186828.2| large subunit ribosomal protein L13 [Arabidopsis thaliana]
gi|30678425|ref|NP_850494.1| large subunit ribosomal protein L13 [Arabidopsis thaliana]
gi|33589790|gb|AAQ22661.1| At1g01640 [Arabidopsis thaliana]
gi|110742779|dbj|BAE99294.1| hypothetical protein [Arabidopsis thaliana]
gi|332640193|gb|AEE73714.1| large subunit ribosomal protein L13 [Arabidopsis thaliana]
gi|332640194|gb|AEE73715.1| large subunit ribosomal protein L13 [Arabidopsis thaliana]
Length = 205
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 87/109 (79%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+QM +DPTE IRKAV RMLP N LRDDRDRKLRIF G EHPFGD+PLEP
Sbjct: 97 YIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEP 156
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPRRVRE+RPR RRAMIR QKKAE ++ K KK +EV A
Sbjct: 157 FVMPPRRVREMRPRARRAMIRAQKKAEQAENEGTEVKKGKKRTLSEVPA 205
>gi|296090245|emb|CBI40064.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+Q+ +DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G EHPF DRPLEP
Sbjct: 92 YIGHLKERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFNDRPLEP 151
Query: 89 YVMPPRRVRELRPRVRRAMIR-EQKKAEMQQSNKDMRKNRKKEVEAEVT 136
YVMPPR+VRE+RPR RRA IR ++K + QQ D RK RKKEVE EV+
Sbjct: 152 YVMPPRQVREMRPRARRATIRAQKKAEQQQQGTTDTRKKRKKEVEPEVS 200
>gi|225452155|ref|XP_002270526.1| PREDICTED: 50S ribosomal protein L13-like [Vitis vinifera]
Length = 216
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER+LK+Q+ +DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G EHPF DRPLEP
Sbjct: 92 YIGHLKERSLKDQLAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFAGDEHPFNDRPLEP 151
Query: 89 YVMPPRRVRELRPRVRRAMIR-EQKKAEMQQSNKDMRKNRKKEVEAEVT 136
YVMPPR+VRE+RPR RRA IR ++K + QQ D RK RKKEVE EV+
Sbjct: 152 YVMPPRQVREMRPRARRATIRAQKKAEQQQQGTTDTRKKRKKEVEPEVS 200
>gi|388499730|gb|AFK37931.1| unknown [Medicago truncatula]
Length = 191
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 84/95 (88%), Gaps = 3/95 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLK+RTLK+QM +DPT+ IRKA+LRM+P+N LRDDRDRKLRIFPGSEHPFGDRPLEP
Sbjct: 91 YVGHLKQRTLKDQMAKDPTDVIRKAILRMIPKNNLRDDRDRKLRIFPGSEHPFGDRPLEP 150
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDM 123
YVMPPR VRE+RPR RRAMIR QK+ Q SNK M
Sbjct: 151 YVMPPRTVREMRPRARRAMIRAQKR---QSSNKRM 182
>gi|148906798|gb|ABR16545.1| unknown [Picea sitchensis]
Length = 186
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/100 (75%), Positives = 86/100 (86%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKERTLK+QM +DPTE IRKAV RMLP+NKL+DDRDRKLRIF GSEHPF DRP+E
Sbjct: 86 YIGHLKERTLKDQMAKDPTEVIRKAVFRMLPKNKLQDDRDRKLRIFSGSEHPFTDRPVES 145
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRK 128
+VMPPR+VRE+RPRVRRAMIR QKKAE + K K++K
Sbjct: 146 FVMPPRKVREMRPRVRRAMIRAQKKAEQSDAIKQAVKDKK 185
>gi|351725941|ref|NP_001236086.1| uncharacterized protein LOC100499790 [Glycine max]
gi|255626635|gb|ACU13662.1| unknown [Glycine max]
Length = 200
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 89/106 (83%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLK+RTLK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF DRPLEP
Sbjct: 93 YIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEP 152
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAE 134
YVMPPR VRE+RPR RRAMIR QKKAE QQ D K + E + E
Sbjct: 153 YVMPPRSVREMRPRARRAMIRAQKKAEQQQQKADGMKGKNGEAQEE 198
>gi|359806218|ref|NP_001241463.1| uncharacterized protein LOC100799712 [Glycine max]
gi|255642066|gb|ACU21299.1| unknown [Glycine max]
Length = 201
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 91/107 (85%), Gaps = 1/107 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLK+RTLK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF DRPLEP
Sbjct: 93 YIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEP 152
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKD-MRKNRKKEVEAE 134
YVMPPR VRE+RPR RRAMIR QKKAE QQ D M+K + E + E
Sbjct: 153 YVMPPRSVREMRPRARRAMIRAQKKAEQQQQKADGMKKGKNGEAQEE 199
>gi|223945517|gb|ACN26842.1| unknown [Zea mays]
gi|413951657|gb|AFW84306.1| putative ribosomal protein L13 family protein [Zea mays]
Length = 207
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G EHPF DRPLE
Sbjct: 102 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFSGIEHPFHDRPLEA 161
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAM+R QKK + SN+ + K AEVTA
Sbjct: 162 FVMPPRQVREMRPRARRAMLRAQKK---EHSNRAKEEEDAKNATAEVTA 207
>gi|226504180|ref|NP_001141236.1| uncharacterized protein LOC100273323 [Zea mays]
gi|194703442|gb|ACF85805.1| unknown [Zea mays]
gi|413951658|gb|AFW84307.1| putative ribosomal protein L13 family protein [Zea mays]
Length = 199
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G EHPF DRPLE
Sbjct: 94 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFSGIEHPFHDRPLEA 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAM+R QKK + SN+ + K AEVTA
Sbjct: 154 FVMPPRQVREMRPRARRAMLRAQKK---EHSNRAKEEEDAKNATAEVTA 199
>gi|195625160|gb|ACG34410.1| 50S ribosomal protein L13 [Zea mays]
Length = 199
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 88/109 (80%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRNKLRDDRDRKLRIF G EHPF DRPLE
Sbjct: 94 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFSGIEHPFHDRPLEA 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAM+R QKK + SN+ + K AEVTA
Sbjct: 154 FVMPPRQVREMRPRARRAMLRAQKK---EHSNRAKEEEDAKNATAEVTA 199
>gi|356577574|ref|XP_003556899.1| PREDICTED: 50S ribosomal protein L13-like [Glycine max]
Length = 201
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 89/107 (83%), Gaps = 1/107 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLK+RTLK+QM +DPTE IRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF DRPLEP
Sbjct: 93 YIGHLKQRTLKDQMAKDPTEVIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFVDRPLEP 152
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKD-MRKNRKKEVEAE 134
YVMPPR RE+RPR RRAMIR QKKAE QQ + M+K + E E
Sbjct: 153 YVMPPRSGREMRPRARRAMIRAQKKAEQQQQKANGMKKGKNGEAREE 199
>gi|326492504|dbj|BAK02035.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 76/85 (89%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QM +DPTE IRKAV+RMLPRNKLRDDRDRKLRIF EHPF DRPLEP
Sbjct: 161 YIGHLKERKLKDQMAKDPTEVIRKAVMRMLPRNKLRDDRDRKLRIFAEGEHPFHDRPLEP 220
Query: 89 YVMPPRRVRELRPRVRRAMIREQKK 113
+VMPPR+VRE+RPR RRAMIR QKK
Sbjct: 221 FVMPPRQVREMRPRARRAMIRAQKK 245
>gi|222639958|gb|EEE68090.1| hypothetical protein OsJ_26137 [Oryza sativa Japonica Group]
Length = 864
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 69/87 (79%), Positives = 79/87 (90%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QME+DPTE IRKAV+RMLPRN+LRDDRDRKLRIF GSEHPF DRPLEP
Sbjct: 729 YIGHLKERRLKDQMEKDPTEVIRKAVMRMLPRNRLRDDRDRKLRIFSGSEHPFHDRPLEP 788
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAE 115
+ MPPR+VRE+RP+ RRA+IR QKK +
Sbjct: 789 FAMPPRQVREMRPQARRALIRAQKKEQ 815
>gi|242055275|ref|XP_002456783.1| hypothetical protein SORBIDRAFT_03g042670 [Sorghum bicolor]
gi|241928758|gb|EES01903.1| hypothetical protein SORBIDRAFT_03g042670 [Sorghum bicolor]
Length = 199
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 90/109 (82%), Gaps = 3/109 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+GHLKER LK+QME+DPTE IRKAVLRMLPRN+LRDDRDRKLRIF G+EHPF DR LEP
Sbjct: 94 YVGHLKERRLKDQMEKDPTEVIRKAVLRMLPRNRLRDDRDRKLRIFSGNEHPFHDRALEP 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRAM+R QKK +Q+N+ + K AEVTA
Sbjct: 154 FVMPPRQVREMRPRARRAMLRAQKK---EQANRAKEEEDAKNATAEVTA 199
>gi|195656243|gb|ACG47589.1| hypothetical protein [Zea mays]
Length = 119
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
Query: 46 PTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRR 105
PTE IRKAVL MLPRNKL DDRDRKLRIF G+EHPF DRPLEP+VMP R+VRE+RPR RR
Sbjct: 31 PTEVIRKAVLXMLPRNKLXDDRDRKLRIFSGNEHPFHDRPLEPFVMPXRQVREMRPRARR 90
Query: 106 AMIREQKKAEMQQSNKDMRKNRKKEVEAEVTA 137
AMIR QKK QQ+N+ + K AEVTA
Sbjct: 91 AMIRAQKK---QQANRAKEEEDAKNAAAEVTA 119
>gi|357160644|ref|XP_003578830.1| PREDICTED: 50S ribosomal protein L13-like [Brachypodium distachyon]
Length = 271
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QM +DPTE IRKAV+RMLPRN+LRDDRDRKLRIF EHPF DRPLEP
Sbjct: 162 YIGHLKERRLKDQMAKDPTEVIRKAVMRMLPRNRLRDDRDRKLRIFSEGEHPFHDRPLEP 221
Query: 89 YVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMR-KNRKKEVEAEVTA 137
+VMPPR+VRE+RPR RRA+IR QKK + +++ M+ + K +AEVTA
Sbjct: 222 FVMPPRQVREMRPRARRALIRAQKKEQDREAKAQMKAEGEAKNAKAEVTA 271
>gi|218200515|gb|EEC82942.1| hypothetical protein OsI_27916 [Oryza sativa Indica Group]
Length = 274
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 78/85 (91%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QME+DPTE IRKAV+RMLPRN+LRDDRDRKLRIF GSEHPF DRPLEP
Sbjct: 139 YIGHLKERRLKDQMEKDPTEVIRKAVMRMLPRNRLRDDRDRKLRIFSGSEHPFHDRPLEP 198
Query: 89 YVMPPRRVRELRPRVRRAMIREQKK 113
+ MPPR+VRE+RPR RRA+IR QKK
Sbjct: 199 FAMPPRQVREMRPRARRALIRAQKK 223
>gi|37806271|dbj|BAC99787.1| putative ribosomal protein I [Oryza sativa Japonica Group]
Length = 229
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 78/85 (91%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QME+DPTE IRKAV+RMLPRN+LRDDRDRKLRIF GSEHPF DRPLEP
Sbjct: 94 YIGHLKERRLKDQMEKDPTEVIRKAVMRMLPRNRLRDDRDRKLRIFSGSEHPFHDRPLEP 153
Query: 89 YVMPPRRVRELRPRVRRAMIREQKK 113
+ MPPR+VRE+RP+ RRA+IR QKK
Sbjct: 154 FAMPPRQVREMRPQARRALIRAQKK 178
>gi|115462819|ref|NP_001055009.1| Os05g0243300 [Oryza sativa Japonica Group]
gi|53981181|gb|AAV24821.1| putative ribosomal protein I [Oryza sativa Japonica Group]
gi|113578560|dbj|BAF16923.1| Os05g0243300 [Oryza sativa Japonica Group]
gi|215766167|dbj|BAG98395.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 191
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 89/110 (80%), Gaps = 5/110 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QME+DPTEAIRKAV+RMLPRN+LRDDRDRKLRIF G+EHPF DRPLEP
Sbjct: 82 YIGHLKERRLKDQMEKDPTEAIRKAVMRMLPRNRLRDDRDRKLRIFSGNEHPFHDRPLEP 141
Query: 89 YVMPPRRVRELRPRVRRAMIREQKK-----AEMQQSNKDMRKNRKKEVEA 133
++MP R+VRE+RPR RRA++R QKK A +++ KN K E+ A
Sbjct: 142 FMMPRRQVREMRPRARRALLRAQKKEQDRAAAASTKDEENAKNAKSEITA 191
>gi|125551504|gb|EAY97213.1| hypothetical protein OsI_19133 [Oryza sativa Indica Group]
gi|222630833|gb|EEE62965.1| hypothetical protein OsJ_17772 [Oryza sativa Japonica Group]
Length = 214
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 89/110 (80%), Gaps = 5/110 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLKER LK+QME+DPTEAIRKAV+RMLPRN+LRDDRDRKLRIF G+EHPF DRPLEP
Sbjct: 105 YIGHLKERRLKDQMEKDPTEAIRKAVMRMLPRNRLRDDRDRKLRIFSGNEHPFHDRPLEP 164
Query: 89 YVMPPRRVRELRPRVRRAMIREQKK-----AEMQQSNKDMRKNRKKEVEA 133
++MP R+VRE+RPR RRA++R QKK A +++ KN K E+ A
Sbjct: 165 FMMPRRQVREMRPRARRALLRAQKKEQDRAAAASTKDEENAKNAKSEITA 214
>gi|6650751|gb|AAF21997.1| ribosomal protein I [Ceratopteris richardii]
Length = 141
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
YIGHLKER+LKEQM +DPTE IRKAV+RMLP+N+LRDDR RKLRIF +HPF
Sbjct: 87 YIGHLKERSLKEQMXKDPTEVIRKAVVRMLPKNRLRDDRARKLRIFVXDQHPF 139
>gi|303286789|ref|XP_003062684.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456201|gb|EEH53503.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 147
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 50/69 (72%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+L RT KE MER+PT IRKAV RMLP+NKLR D RKLR+FPG H F D PL P
Sbjct: 79 YVGNLVTRTAKEMMEREPTFLIRKAVERMLPKNKLRKDMMRKLRVFPGETHAFDDVPLVP 138
Query: 89 YVMPPRRVR 97
MPPR +R
Sbjct: 139 LKMPPRVIR 147
>gi|125528711|gb|EAY76825.1| hypothetical protein OsI_04785 [Oryza sativa Indica Group]
Length = 159
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 5/73 (6%)
Query: 66 DRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKK-----AEMQQSN 120
DRDRKLRIF G+EHPF DRPLEP+VMPPR+VRE+RPR RR +IR QKK A +
Sbjct: 87 DRDRKLRIFSGNEHPFHDRPLEPFVMPPRQVREMRPRARRVLIRAQKKEQDRAAAASTKD 146
Query: 121 KDMRKNRKKEVEA 133
++ KN K E+ A
Sbjct: 147 EENVKNAKSEITA 159
>gi|384253254|gb|EIE26729.1| ribosomal protein L13 [Coccomyxa subellipsoidea C-169]
Length = 207
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP-LE 87
+ G LKER K++ ERDPT +R+AV MLP+NKLR +R RKLRIFPG EHPF D P L
Sbjct: 80 FPGGLKERPAKKEFERDPTSILRRAVYGMLPKNKLRKERARKLRIFPGEEHPFADHPALV 139
Query: 88 PYVMPP--RRVRE 98
P+ MPP RRVRE
Sbjct: 140 PWEMPPRKRRVRE 152
>gi|56784324|dbj|BAD82345.1| ribosomal protein-like [Oryza sativa Japonica Group]
gi|56785273|dbj|BAD82182.1| ribosomal protein-like [Oryza sativa Japonica Group]
gi|125572969|gb|EAZ14484.1| hypothetical protein OsJ_04407 [Oryza sativa Japonica Group]
Length = 86
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 5/73 (6%)
Query: 66 DRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKK-----AEMQQSN 120
DRDRKLRIF G+EHPF DRPLEP+VMPPR+VRE+RPR RR +IR QKK A +
Sbjct: 14 DRDRKLRIFSGNEHPFHDRPLEPFVMPPRQVREMRPRARRVLIRAQKKEQDRAAAASTKD 73
Query: 121 KDMRKNRKKEVEA 133
++ KN K E+ A
Sbjct: 74 EENVKNAKSEITA 86
>gi|302772260|ref|XP_002969548.1| hypothetical protein SELMODRAFT_91568 [Selaginella moellendorffii]
gi|300163024|gb|EFJ29636.1| hypothetical protein SELMODRAFT_91568 [Selaginella moellendorffii]
Length = 197
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLK+ L +ERDPT +RKAV RM+PRN+L R KLR+F HPF D+PL P
Sbjct: 83 YIGHLKQIKLNHMIERDPTLPLRKAVFRMMPRNRLHRRRMLKLRVFADERHPFDDKPLVP 142
Query: 89 YVMPPRRVRELRPRVRRAM 107
+ MPPR +R+ R V R++
Sbjct: 143 WTMPPRNIRKPRIYVPRSI 161
>gi|302774801|ref|XP_002970817.1| hypothetical protein SELMODRAFT_94231 [Selaginella moellendorffii]
gi|300161528|gb|EFJ28143.1| hypothetical protein SELMODRAFT_94231 [Selaginella moellendorffii]
Length = 200
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIGHLK+ L +ERDPT +RKAV RM+PRN+L R KLR+F HPF D+PL P
Sbjct: 83 YIGHLKQIKLNHMIERDPTLPLRKAVFRMMPRNRLHRRRMLKLRVFADERHPFDDKPLVP 142
Query: 89 YVMPPRRVRELRPRVRRAM 107
+ MPPR +R+ R V R++
Sbjct: 143 WTMPPRNIRKPRIYVPRSI 161
>gi|159479034|ref|XP_001697603.1| mitochondrial ribosomal protein L13 [Chlamydomonas reinhardtii]
gi|158274213|gb|EDO99996.1| mitochondrial ribosomal protein L13 [Chlamydomonas reinhardtii]
Length = 277
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ R +Q E+DP +R AV MLP+NK R+ R KL+IFP ++HPF PL P
Sbjct: 89 YPGGLRSRPAGDQWEKDPRMLLRNAVSGMLPKNKSREARMEKLKIFPEADHPFQGFPLVP 148
Query: 89 YVMPPRRVRE 98
YV PPRR+++
Sbjct: 149 YVPPPRRLQD 158
>gi|218196407|gb|EEC78834.1| hypothetical protein OsI_19132 [Oryza sativa Indica Group]
gi|222630832|gb|EEE62964.1| hypothetical protein OsJ_17771 [Oryza sativa Japonica Group]
Length = 196
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 66 DRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKAEMQQSNKDMRK 125
DRDRKLRIF G+EHPF DRPLEP+VMPPR+V+E+RPR RRA++R QKK + + +
Sbjct: 125 DRDRKLRIFSGNEHPFHDRPLEPFVMPPRQVQEMRPRARRALLRAQKKEQDRAAASTKDD 184
Query: 126 NRKKEVEAEVTA 137
K ++E+TA
Sbjct: 185 ENAKNAKSEITA 196
>gi|302854320|ref|XP_002958669.1| mitochondrial ribosomal protein L13 [Volvox carteri f. nagariensis]
gi|300255994|gb|EFJ40272.1| mitochondrial ribosomal protein L13 [Volvox carteri f. nagariensis]
Length = 229
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
+ G L+ RT +EQ E+DP + I AV MLP+NK R+ R KL+IFP +EHPF D PL P
Sbjct: 89 FPGGLRARTAQEQWEKDPRKLIWNAVNGMLPKNKSREVRMDKLKIFPEAEHPFTDFPLVP 148
Query: 89 YVMPPRRVRE 98
YV PR + +
Sbjct: 149 YVPKPRTLGD 158
>gi|348688453|gb|EGZ28267.1| Mitochondrial/chloroplast ribosomal protein L13 [Phytophthora
sojae]
Length = 140
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY-IGH---LKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV +++ +L+ N + YR+ GH LK+RT KE ER P E +RKAV MLPR
Sbjct: 50 YVVVINAKDI-VLTGNKWNNKLYRWHTGHPGGLKQRTAKELFERKPEEVLRKAVFGMLPR 108
Query: 61 NKLRDDRDRKLRIFPGSEHPF----GDRPL 86
N++R +D+KL+IF G EH F G+ P+
Sbjct: 109 NRMRALQDKKLKIFMGEEHDFVAEVGENPV 138
>gi|6091722|gb|AAF03434.1|AC010797_10 putative ribosomal protein L13 [Arabidopsis thaliana]
Length = 137
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRD 65
YIGHLKER+LK+QM +DPTE IRKAV RMLP N LRD
Sbjct: 97 YIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRD 133
>gi|301117524|ref|XP_002906490.1| 50S ribosomal protein L13 [Phytophthora infestans T30-4]
gi|262107839|gb|EEY65891.1| 50S ribosomal protein L13 [Phytophthora infestans T30-4]
Length = 140
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY-IGH---LKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV +++ +L+ N + YR+ GH LK+RT KE +R P E +RKAV MLPR
Sbjct: 50 YVVVINAKDI-VLTGNKWNNKLYRWHTGHPGGLKQRTAKEMFDRKPEEVLRKAVYGMLPR 108
Query: 61 NKLRDDRDRKLRIFPGSEHPF----GDRPL 86
N++R +D+KL+IF G EH F G+ P+
Sbjct: 109 NRMRALQDKKLKIFMGDEHDFVAEVGENPI 138
>gi|412985343|emb|CCO18789.1| 50S ribosomal protein L13 [Bathycoccus prasinos]
Length = 199
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP--- 85
Y+G L RT K RD T IRKAV RMLP N+LR + RKLR+FP EHPF D
Sbjct: 100 YVGGLVTRTAKAMHARDETFLIRKAVERMLPDNQLRKEHLRKLRVFPNEEHPFKDLSADR 159
Query: 86 LEPYVMPPRRVR 97
L P+ MP R ++
Sbjct: 160 LVPFEMPLRALK 171
>gi|255076139|ref|XP_002501744.1| predicted protein [Micromonas sp. RCC299]
gi|226517008|gb|ACO63002.1| predicted protein [Micromonas sp. RCC299]
Length = 122
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+G L ERT +E M ++PT +RKAV RMLP+NKLR + RKLR+FPG H F
Sbjct: 70 YVGGLVERTAREMMNQEPTFVLRKAVERMLPKNKLRREMMRKLRVFPGERHAF 122
>gi|168062022|ref|XP_001782983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665548|gb|EDQ52229.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 128
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRD 65
YIGH+KERT+KEQM RD TE +RKAV RMLPRNKLRD
Sbjct: 87 YIGHVKERTVKEQMVRDSTEVLRKAVHRMLPRNKLRD 123
>gi|319789360|ref|YP_004150993.1| 50S ribosomal protein L13 [Thermovibrio ammonificans HB-1]
gi|317113862|gb|ADU96352.1| ribosomal protein L13 [Thermovibrio ammonificans HB-1]
Length = 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + E + Y+ Y G LKE LK+ ++ P E IR AV MLP+N
Sbjct: 53 FVVVINADKIHVTGRKLEKKIYYKHTLYPGGLKETKLKDMLKEKPEEVIRLAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGD---RPLE 87
KLRD R ++L+++ GSEHP G +PLE
Sbjct: 113 KLRDRRMKRLKVYAGSEHPHGAQNPKPLE 141
>gi|325295438|ref|YP_004281952.1| 50S ribosomal protein L13 [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065886|gb|ADY73893.1| ribosomal protein L13 [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD---RP 85
Y+GHLKE TLKE +++ P E I+ AV MLP+NKLRD R ++L+++ HP +P
Sbjct: 80 YMGHLKETTLKEMLQKKPEEVIKLAVRGMLPKNKLRDRRMKRLKVYAAPTHPHSAQNPKP 139
Query: 86 LE 87
LE
Sbjct: 140 LE 141
>gi|145344740|ref|XP_001416883.1| Putative mitochondrial ribosomal protein L13 [Ostreococcus
lucimarinus CCE9901]
gi|144577109|gb|ABO95176.1| Putative mitochondrial ribosomal protein L13 [Ostreococcus
lucimarinus CCE9901]
Length = 137
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G L RT +E +RDPT +RKAV RMLPR + RKLR+FPG+EH F + +
Sbjct: 72 YVGGLVTRTAREMFDRDPTWVLRKAVERMLPRCVRSKETMRKLRVFPGAEHAFDESKMSR 131
Query: 89 YVMPPR 94
P R
Sbjct: 132 MEAPAR 137
>gi|443896296|dbj|GAC73640.1| hypothetical protein PANT_9d00196 [Pseudozyma antarctica T-34]
Length = 289
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LKE KE MER P E IRKAV MLP+N LRD R +L+IF G +HP+ ++
Sbjct: 81 YPGGLKEIKYKEMMERKPEEIIRKAVSGMLPKNTLRDRRLERLKIFDGEQHPYAQNIIQR 140
Query: 89 Y 89
Y
Sbjct: 141 Y 141
>gi|403177148|ref|XP_003335717.2| hypothetical protein PGTG_17155 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172750|gb|EFP91298.2| large subunit ribosomal protein L13 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 208
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSY---RYIGHLKERTLKEQMERDPTEAIRKAVLRML 58
+ YVV R++ + ++ Y +Y G LK K+ M+++PT +RKAV ML
Sbjct: 94 VGDYVVVTNARHVQVTGKKEDQKTYYSHSQYPGALKATPYKQLMDQNPTMILRKAVSGML 153
Query: 59 PRNKLRDDRDRKLRIFPGSEHPF 81
P+NKLRD R +L IFP EHP+
Sbjct: 154 PKNKLRDRRLERLHIFPDEEHPY 176
>gi|71003778|ref|XP_756555.1| hypothetical protein UM00408.1 [Ustilago maydis 521]
gi|46095557|gb|EAK80790.1| hypothetical protein UM00408.1 [Ustilago maydis 521]
Length = 183
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 36/53 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G LKE KE ME+ P E IRKAV MLP+N LRD R +L+IF G +HP+
Sbjct: 81 YPGGLKEIKYKEMMEKKPEEIIRKAVSGMLPKNTLRDRRLERLKIFDGEKHPY 133
>gi|388852147|emb|CCF54153.1| probable MRPL23-mitochondrial ribosomal protein, large subunit
[Ustilago hordei]
Length = 159
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYV 90
G LKE KE ME+ P E IRKAV MLP+N LRD R +L+IF G +HP+ ++ Y
Sbjct: 83 GGLKEIKYKEMMEKKPEEIIRKAVSGMLPKNTLRDRRLERLKIFDGEDHPYAQNVIKRYD 142
Query: 91 MP 92
P
Sbjct: 143 AP 144
>gi|260889101|ref|ZP_05900364.1| ribosomal protein L13 [Leptotrichia hofstadii F0254]
gi|260861161|gb|EEX75661.1| ribosomal protein L13 [Leptotrichia hofstadii F0254]
Length = 144
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 8 FFILRNL--FILSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +++ N + Y Y G L+ RTL+E +++ PTE IRKAV RMLP+N
Sbjct: 55 FVIITNADKIVVTGNKLLDKKYYRHSGYPGGLRVRTLEEMLQKQPTEVIRKAVERMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL +LR+F GSEH
Sbjct: 115 KLGSQMINRLRLFTGSEH 132
>gi|291288178|ref|YP_003504994.1| 50S ribosomal protein L13 [Denitrovibrio acetiphilus DSM 12809]
gi|290885338|gb|ADD69038.1| ribosomal protein L13 [Denitrovibrio acetiphilus DSM 12809]
Length = 142
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G +K+RTLKEQ+E+ P E IR AV RMLP+ K+ +KL+I+ G HP
Sbjct: 80 YLGGIKDRTLKEQLEKKPEEVIRMAVRRMLPKTKMGRAMIKKLKIYTGGAHP 131
>gi|257125778|ref|YP_003163892.1| 50S ribosomal protein L13 [Leptotrichia buccalis C-1013-b]
gi|257049717|gb|ACV38901.1| ribosomal protein L13 [Leptotrichia buccalis C-1013-b]
Length = 144
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ LN D+++V+ YR Y G LK R L+E +++ PTE IRKAV RMLP+N
Sbjct: 55 FVIVLNADKIAVTGNKLLDKKYYRHSGYPGGLKVRNLEEMLQKQPTEVIRKAVERMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL +LR+F G+EH
Sbjct: 115 KLGSQMINRLRLFTGTEH 132
>gi|323507947|emb|CBQ67818.1| probable MRPL23-mitochondrial ribosomal protein, large subunit
[Sporisorium reilianum SRZ2]
Length = 160
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G LKE KE ME+ P E IRKAV MLP+N LRD R +L+IF G EHP+ + Y
Sbjct: 83 GGLKEIKYKEMMEKKPEEIIRKAVSGMLPKNTLRDRRLERLKIFDGEEHPYAQNVIRRY 141
>gi|262038398|ref|ZP_06011775.1| ribosomal protein L13 [Leptotrichia goodfellowii F0264]
gi|261747616|gb|EEY35078.1| ribosomal protein L13 [Leptotrichia goodfellowii F0264]
Length = 144
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK R+L+E +E+ PTE IRKAV RMLP+NKL +L+I+ G+EH
Sbjct: 82 YPGGLKVRSLEEMLEKKPTEVIRKAVERMLPKNKLGSQMIGRLKIYTGTEH 132
>gi|384493041|gb|EIE83532.1| 50S ribosomal protein L13 [Rhizopus delemar RA 99-880]
Length = 146
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV +++ + E + YR Y G LKE K+ +D TE IRKA+ MLP+
Sbjct: 54 YVVVINAKDILVSGKKAEQKL-YRHHTMYPGGLKEINFKDLQAKDSTEPIRKAISGMLPK 112
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR R +L+IF GSEHP+
Sbjct: 113 NRLRQVRLDRLKIFEGSEHPY 133
>gi|307244435|ref|ZP_07526545.1| ribosomal protein L13 [Peptostreptococcus stomatis DSM 17678]
gi|306492192|gb|EFM64235.1| ribosomal protein L13 [Peptostreptococcus stomatis DSM 17678]
Length = 142
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LKE + KE ME+ P E + AV MLP+NKLRD +LR++ G+EHP
Sbjct: 80 YVGGLKEISYKEMMEKKPEEVVAHAVSGMLPKNKLRDRMMTRLRVYRGTEHP 131
>gi|298526928|ref|ZP_07014337.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis
94_M4241A]
gi|298496722|gb|EFI32016.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis
94_M4241A]
Length = 147
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L +RT+ E M+R P + KA+L MLP+N
Sbjct: 53 FVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L RKLR++ G+EHP + PY
Sbjct: 113 RLSRQIQRKLRVYAGAEHPHSAQQPVPY 140
>gi|384501275|gb|EIE91766.1| 50S ribosomal protein L13 [Rhizopus delemar RA 99-880]
Length = 146
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV +++ + E + YR Y G LKE K+ +D TE IRKA+ MLP+
Sbjct: 54 YVVVINAKDVLVSGKKAEQKL-YRHHTMYPGGLKEINFKDLQAKDSTEPIRKAISGMLPK 112
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR R +L+IF GSEHP+
Sbjct: 113 NRLRQVRLDRLKIFEGSEHPY 133
>gi|323453911|gb|EGB09782.1| hypothetical protein AURANDRAFT_8271, partial [Aureococcus
anophagefferens]
Length = 132
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKERT KE R P E +R+AVL MLP+NKLR +L+I+ G +HP
Sbjct: 81 YPGGLKERTAKEMQRRKPGEVLRRAVLGMLPKNKLRQTFATRLKIYAGKDHP 132
>gi|289422836|ref|ZP_06424669.1| ribosomal protein L13 [Peptostreptococcus anaerobius 653-L]
gi|289156746|gb|EFD05378.1| ribosomal protein L13 [Peptostreptococcus anaerobius 653-L]
Length = 143
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LKE + KE ME+ P E + AV MLP+NKLRD +LR++ G+EHP
Sbjct: 80 YVGGLKEISYKEMMEKKPEEVVAHAVSGMLPKNKLRDRMMTRLRVYRGAEHP 131
>gi|429728053|ref|ZP_19262796.1| ribosomal protein L13 [Peptostreptococcus anaerobius VPI 4330]
gi|429150616|gb|EKX93518.1| ribosomal protein L13 [Peptostreptococcus anaerobius VPI 4330]
Length = 164
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LKE + KE ME+ P E + AV MLP+NKLRD +LR++ G+EHP
Sbjct: 101 YVGGLKEISYKEMMEKKPEEVVAHAVSGMLPKNKLRDRMMTRLRVYRGAEHP 152
>gi|336441326|gb|AEI54888.1| 50S ribosomal protein L13 [Mycobacterium franklinii]
Length = 147
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+ + + + G L++R++ EQ+E+ PT + KA++ MLP+NKL +RKL+++ G+
Sbjct: 69 LTDKFAYRHSGFPGGLRKRSMGEQLEKFPTRTVEKAIIGMLPKNKLGRQIERKLKVYAGA 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|386773264|ref|ZP_10095642.1| 50S ribosomal protein L13P [Brachybacterium paraconglomeratum LC44]
Length = 147
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L+ E +E++P +A+ KA+ MLP+N
Sbjct: 53 FVIIINADKVALTGNKREAKLAYRHSGYPGGLRGVPYSELLEKNPEKAVEKAIRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL D + +KL+I+ GSEHP + P+ +
Sbjct: 113 KLADQQIKKLKIYSGSEHPHSAQQPVPFTI 142
>gi|15610579|ref|NP_217960.1| 50S ribosomal protein L13 RplM [Mycobacterium tuberculosis H37Rv]
gi|15843038|ref|NP_338075.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CDC1551]
gi|31794620|ref|NP_857113.1| 50S ribosomal protein L13 [Mycobacterium bovis AF2122/97]
gi|121639364|ref|YP_979588.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663308|ref|YP_001284831.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Ra]
gi|148824653|ref|YP_001289407.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis F11]
gi|167966785|ref|ZP_02549062.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Ra]
gi|224991860|ref|YP_002646549.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800488|ref|YP_003033489.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis KZN 1435]
gi|254234039|ref|ZP_04927364.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis C]
gi|254366046|ref|ZP_04982091.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis str.
Haarlem]
gi|254552547|ref|ZP_05142994.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289445044|ref|ZP_06434788.1| LSU ribosomal protein L13 [Mycobacterium tuberculosis T46]
gi|289449147|ref|ZP_06438891.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis CPHL_A]
gi|289571677|ref|ZP_06451904.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis T17]
gi|289576180|ref|ZP_06456407.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis K85]
gi|289747277|ref|ZP_06506655.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis 02_1987]
gi|289752168|ref|ZP_06511546.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis T92]
gi|289755576|ref|ZP_06514954.1| ribosomal protein L13 [Mycobacterium tuberculosis EAS054]
gi|289759606|ref|ZP_06518984.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis T85]
gi|289763624|ref|ZP_06523002.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis GM 1503]
gi|294995776|ref|ZP_06801467.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis 210]
gi|297636102|ref|ZP_06953882.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis KZN 4207]
gi|297733102|ref|ZP_06962220.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis KZN R506]
gi|306777790|ref|ZP_07416127.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu001]
gi|306782509|ref|ZP_07420846.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu002]
gi|306786328|ref|ZP_07424650.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu003]
gi|306790698|ref|ZP_07429020.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu004]
gi|306795225|ref|ZP_07433527.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu005]
gi|306799415|ref|ZP_07437717.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu006]
gi|306805261|ref|ZP_07441929.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu008]
gi|306809447|ref|ZP_07446115.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu007]
gi|306969555|ref|ZP_07482216.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu009]
gi|306973909|ref|ZP_07486570.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu010]
gi|307081619|ref|ZP_07490789.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu011]
gi|307086224|ref|ZP_07495337.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu012]
gi|313660433|ref|ZP_07817313.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis KZN V2475]
gi|339633448|ref|YP_004725090.1| 50S ribosomal protein L13 [Mycobacterium africanum GM041182]
gi|340628414|ref|YP_004746866.1| putative 50S ribosomal protein L13 RPLM [Mycobacterium canettii
CIPT 140010059]
gi|375297714|ref|YP_005101981.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis KZN
4207]
gi|378773225|ref|YP_005172958.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Mexico]
gi|383309173|ref|YP_005361984.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis RGTB327]
gi|386000232|ref|YP_005918531.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CTRI-2]
gi|386006275|ref|YP_005924554.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis RGTB423]
gi|392388046|ref|YP_005309675.1| rplM [Mycobacterium tuberculosis UT205]
gi|392433926|ref|YP_006474970.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis KZN 605]
gi|397675397|ref|YP_006516932.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Rv]
gi|422814675|ref|ZP_16862898.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis
CDC1551A]
gi|424806014|ref|ZP_18231445.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis W-148]
gi|424949071|ref|ZP_18364767.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis NCGM2209]
gi|433628586|ref|YP_007262215.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140060008]
gi|433632543|ref|YP_007266171.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070010]
gi|433636535|ref|YP_007270162.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070017]
gi|433643639|ref|YP_007289398.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070008]
gi|449065555|ref|YP_007432638.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Korea
1168P]
gi|54039090|sp|P66066.1|RL13_MYCBO RecName: Full=50S ribosomal protein L13
gi|54041819|sp|P66065.1|RL13_MYCTU RecName: Full=50S ribosomal protein L13
gi|166230997|sp|A1KPD0.1|RL13_MYCBP RecName: Full=50S ribosomal protein L13
gi|166230999|sp|A5U8B9.1|RL13_MYCTA RecName: Full=50S ribosomal protein L13
gi|254798506|sp|C1AHQ2.1|RL13_MYCBT RecName: Full=50S ribosomal protein L13
gi|13883381|gb|AAK47889.1| ribosomal protein L13 [Mycobacterium tuberculosis CDC1551]
gi|31620217|emb|CAD95660.1| PROBABLE 50S RIBOSOMAL PROTEIN L13 RPLM [Mycobacterium bovis
AF2122/97]
gi|121495012|emb|CAL73498.1| Probable 50S ribosomal protein L13 rplM [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124599568|gb|EAY58672.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis C]
gi|134151559|gb|EBA43604.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis str.
Haarlem]
gi|148507460|gb|ABQ75269.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Ra]
gi|148723180|gb|ABR07805.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis F11]
gi|224774975|dbj|BAH27781.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321991|gb|ACT26594.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis KZN
1435]
gi|289417963|gb|EFD15203.1| LSU ribosomal protein L13 [Mycobacterium tuberculosis T46]
gi|289422105|gb|EFD19306.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis CPHL_A]
gi|289540611|gb|EFD45189.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis K85]
gi|289545431|gb|EFD49079.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis T17]
gi|289687805|gb|EFD55293.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis 02_1987]
gi|289692755|gb|EFD60184.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis T92]
gi|289696163|gb|EFD63592.1| ribosomal protein L13 [Mycobacterium tuberculosis EAS054]
gi|289711130|gb|EFD75146.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis GM 1503]
gi|289715170|gb|EFD79182.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis T85]
gi|308213877|gb|EFO73276.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu001]
gi|308324826|gb|EFP13677.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu002]
gi|308329080|gb|EFP17931.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu003]
gi|308332891|gb|EFP21742.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu004]
gi|308336550|gb|EFP25401.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu005]
gi|308340425|gb|EFP29276.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu006]
gi|308344287|gb|EFP33138.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu007]
gi|308348178|gb|EFP37029.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu008]
gi|308352902|gb|EFP41753.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu009]
gi|308356747|gb|EFP45598.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu010]
gi|308360693|gb|EFP49544.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu011]
gi|308364307|gb|EFP53158.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis SUMu012]
gi|323717927|gb|EGB27116.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis
CDC1551A]
gi|326905290|gb|EGE52223.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis W-148]
gi|328460219|gb|AEB05642.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis KZN
4207]
gi|339332804|emb|CCC28527.1| putative 50S ribosomal protein L13 RPLM [Mycobacterium africanum
GM041182]
gi|340006604|emb|CCC45791.1| putative 50S ribosomal protein L13 RPLM [Mycobacterium canettii
CIPT 140010059]
gi|341603385|emb|CCC66066.1| probable 50S ribosomal protein L13 rplM [Mycobacterium bovis BCG
str. Moreau RDJ]
gi|344221279|gb|AEN01910.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CTRI-2]
gi|356595546|gb|AET20775.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Mexico]
gi|358233586|dbj|GAA47078.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis NCGM2209]
gi|378546597|emb|CCE38876.1| rplM [Mycobacterium tuberculosis UT205]
gi|379029811|dbj|BAL67544.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|380723126|gb|AFE18235.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis RGTB327]
gi|380726763|gb|AFE14558.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis RGTB423]
gi|392055335|gb|AFM50893.1| 50S ribosomal protein L13 rplM [Mycobacterium tuberculosis KZN 605]
gi|395140302|gb|AFN51461.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis H37Rv]
gi|432156192|emb|CCK53450.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140060008]
gi|432160187|emb|CCK57510.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070008]
gi|432164136|emb|CCK61581.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070010]
gi|432168128|emb|CCK65660.1| 50S ribosomal subunit protein L13 [Mycobacterium canettii CIPT
140070017]
gi|440582937|emb|CCG13340.1| putative 50S RIBOSOMAL protein L13 RPLM [Mycobacterium tuberculosis
7199-99]
gi|444896999|emb|CCP46265.1| 50S ribosomal protein L13 RplM [Mycobacterium tuberculosis H37Rv]
gi|449034063|gb|AGE69490.1| 50S ribosomal protein L13 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 147
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L +RT+ E M+R P + KA+L MLP+N
Sbjct: 53 FVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L RKLR++ G EHP + PY
Sbjct: 113 RLSRQIQRKLRVYAGPEHPHSAQQPVPY 140
>gi|149918681|ref|ZP_01907169.1| 50S ribosomal protein L13 [Plesiocystis pacifica SIR-1]
gi|149820522|gb|EDM79936.1| 50S ribosomal protein L13 [Plesiocystis pacifica SIR-1]
Length = 142
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG++K RT +E +ER P I AV RMLP+ L +KL+++ GSEHP G + +P
Sbjct: 80 YIGNMKTRTAREMLERKPELVISSAVKRMLPKGVLGRQTFKKLKVYAGSEHPHGAQNPKP 139
Query: 89 Y 89
+
Sbjct: 140 H 140
>gi|418421855|ref|ZP_12995028.1| 50S ribosomal protein L13 [Mycobacterium abscessus subsp. bolletii
BD]
gi|419708943|ref|ZP_14236411.1| 50S ribosomal protein L13 [Mycobacterium abscessus M93]
gi|336441328|gb|AEI54889.1| 50S ribosomal protein L13 [Mycobacterium abscessus subsp. bolletii]
gi|363995771|gb|EHM16988.1| 50S ribosomal protein L13 [Mycobacterium abscessus subsp. bolletii
BD]
gi|382942824|gb|EIC67138.1| 50S ribosomal protein L13 [Mycobacterium abscessus M93]
Length = 147
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L +R++ EQ+E+ PT + KA++ MLP+NKL +RKL+++ G+EHP
Sbjct: 82 GGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIERKLKVYAGAEHP 131
>gi|169630831|ref|YP_001704480.1| 50S ribosomal protein L13 [Mycobacterium abscessus ATCC 19977]
gi|365871687|ref|ZP_09411226.1| 50S ribosomal protein L13 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|397680267|ref|YP_006521802.1| 50S ribosomal protein L13 [Mycobacterium massiliense str. GO 06]
gi|414582788|ref|ZP_11439928.1| ribosomal protein L13 [Mycobacterium abscessus 5S-1215]
gi|418247100|ref|ZP_12873486.1| 50S ribosomal protein L13 [Mycobacterium abscessus 47J26]
gi|419717680|ref|ZP_14245055.1| 50S ribosomal protein L13 [Mycobacterium abscessus M94]
gi|420865244|ref|ZP_15328633.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0303]
gi|420870034|ref|ZP_15333416.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0726-RA]
gi|420874480|ref|ZP_15337856.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0726-RB]
gi|420879191|ref|ZP_15342558.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0304]
gi|420885931|ref|ZP_15349291.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0421]
gi|420890922|ref|ZP_15354269.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0422]
gi|420895515|ref|ZP_15358854.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0708]
gi|420901562|ref|ZP_15364893.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0817]
gi|420907763|ref|ZP_15371081.1| ribosomal protein L13 [Mycobacterium abscessus 5S-1212]
gi|420911387|ref|ZP_15374699.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0125-R]
gi|420917844|ref|ZP_15381147.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0125-S]
gi|420923008|ref|ZP_15386304.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0728-S]
gi|420928668|ref|ZP_15391948.1| ribosomal protein L13 [Mycobacterium abscessus 6G-1108]
gi|420932985|ref|ZP_15396260.1| ribosomal protein L13 [Mycobacterium massiliense 1S-151-0930]
gi|420937472|ref|ZP_15400741.1| ribosomal protein L13 [Mycobacterium massiliense 1S-152-0914]
gi|420943245|ref|ZP_15406501.1| ribosomal protein L13 [Mycobacterium massiliense 1S-153-0915]
gi|420948194|ref|ZP_15411444.1| ribosomal protein L13 [Mycobacterium massiliense 1S-154-0310]
gi|420953394|ref|ZP_15416636.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0626]
gi|420957569|ref|ZP_15420803.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0107]
gi|420963232|ref|ZP_15426456.1| ribosomal protein L13 [Mycobacterium massiliense 2B-1231]
gi|420968277|ref|ZP_15431481.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0810-R]
gi|420974630|ref|ZP_15437821.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0921]
gi|420979009|ref|ZP_15442186.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0212]
gi|420984393|ref|ZP_15447560.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0728-R]
gi|420987793|ref|ZP_15450949.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0206]
gi|420993513|ref|ZP_15456659.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0307]
gi|420999288|ref|ZP_15462423.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0912-R]
gi|421003810|ref|ZP_15466932.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0912-S]
gi|421008509|ref|ZP_15471619.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0119-R]
gi|421014444|ref|ZP_15477520.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0122-R]
gi|421019308|ref|ZP_15482365.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0122-S]
gi|421025161|ref|ZP_15488205.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0731]
gi|421029885|ref|ZP_15492916.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0930-R]
gi|421035792|ref|ZP_15498810.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0930-S]
gi|421040376|ref|ZP_15503384.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0116-R]
gi|421044832|ref|ZP_15507832.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0116-S]
gi|421050779|ref|ZP_15513773.1| ribosomal protein L13 [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|226702883|sp|B1MG81.1|RL13_MYCA9 RecName: Full=50S ribosomal protein L13
gi|169242798|emb|CAM63826.1| 50S ribosomal protein L13 [Mycobacterium abscessus]
gi|336441324|gb|AEI54887.1| 50S ribosomal protein L13 [Mycobacterium abscessus]
gi|336441334|gb|AEI54892.1| 50S ribosomal protein L13 [Mycobacterium abscessus subsp. bolletii]
gi|353451593|gb|EHB99986.1| 50S ribosomal protein L13 [Mycobacterium abscessus 47J26]
gi|363994027|gb|EHM15248.1| 50S ribosomal protein L13 [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|382937561|gb|EIC61910.1| 50S ribosomal protein L13 [Mycobacterium abscessus M94]
gi|392063960|gb|EIT89809.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0303]
gi|392065955|gb|EIT91803.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0726-RB]
gi|392069504|gb|EIT95351.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0726-RA]
gi|392078182|gb|EIU04009.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0422]
gi|392081694|gb|EIU07520.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0421]
gi|392084100|gb|EIU09925.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0304]
gi|392094827|gb|EIU20622.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0708]
gi|392098923|gb|EIU24717.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0817]
gi|392105667|gb|EIU31453.1| ribosomal protein L13 [Mycobacterium abscessus 5S-1212]
gi|392110735|gb|EIU36505.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0125-S]
gi|392113381|gb|EIU39150.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0125-R]
gi|392117940|gb|EIU43708.1| ribosomal protein L13 [Mycobacterium abscessus 5S-1215]
gi|392127661|gb|EIU53411.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0728-S]
gi|392129786|gb|EIU55533.1| ribosomal protein L13 [Mycobacterium abscessus 6G-1108]
gi|392137744|gb|EIU63481.1| ribosomal protein L13 [Mycobacterium massiliense 1S-151-0930]
gi|392142987|gb|EIU68712.1| ribosomal protein L13 [Mycobacterium massiliense 1S-152-0914]
gi|392148342|gb|EIU74060.1| ribosomal protein L13 [Mycobacterium massiliense 1S-153-0915]
gi|392152307|gb|EIU78014.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0626]
gi|392155224|gb|EIU80930.1| ribosomal protein L13 [Mycobacterium massiliense 1S-154-0310]
gi|392162513|gb|EIU88203.1| ribosomal protein L13 [Mycobacterium abscessus 5S-0921]
gi|392163287|gb|EIU88976.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0212]
gi|392169389|gb|EIU95067.1| ribosomal protein L13 [Mycobacterium abscessus 6G-0728-R]
gi|392178070|gb|EIV03723.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0912-R]
gi|392179615|gb|EIV05267.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0307]
gi|392182072|gb|EIV07723.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0206]
gi|392192513|gb|EIV18137.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0912-S]
gi|392196657|gb|EIV22273.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0119-R]
gi|392198721|gb|EIV24332.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0122-R]
gi|392207938|gb|EIV33515.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0122-S]
gi|392211958|gb|EIV37524.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0731]
gi|392221304|gb|EIV46827.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0116-R]
gi|392223105|gb|EIV48627.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0930-R]
gi|392224287|gb|EIV49808.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0930-S]
gi|392234285|gb|EIV59783.1| ribosomal protein L13 [Mycobacterium abscessus 4S-0116-S]
gi|392239382|gb|EIV64875.1| ribosomal protein L13 [Mycobacterium massiliense CCUG 48898]
gi|392246145|gb|EIV71622.1| ribosomal protein L13 [Mycobacterium massiliense 2B-1231]
gi|392247295|gb|EIV72771.1| ribosomal protein L13 [Mycobacterium massiliense 2B-0107]
gi|392250784|gb|EIV76258.1| ribosomal protein L13 [Mycobacterium abscessus 3A-0810-R]
gi|395458532|gb|AFN64195.1| 50S ribosomal protein L13 [Mycobacterium massiliense str. GO 06]
Length = 147
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L +R++ EQ+E+ PT + KA++ MLP+NKL +RKL+++ G+EHP
Sbjct: 82 GGLSKRSIGEQLEKFPTRTVEKAIVGMLPKNKLGRQIERKLKVYAGAEHP 131
>gi|306820798|ref|ZP_07454423.1| 50S ribosomal protein L13 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|402310410|ref|ZP_10829376.1| ribosomal protein L13 [Eubacterium sp. AS15]
gi|304551188|gb|EFM39154.1| 50S ribosomal protein L13 [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|400368862|gb|EJP21869.1| ribosomal protein L13 [Eubacterium sp. AS15]
Length = 142
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG+LKE K+ E+ P E IR +V MLP+NKLR ++LRIF GSEH + +E
Sbjct: 80 YIGNLKEINFKKLQEKKPEEIIRLSVSGMLPKNKLRAPMMKRLRIFAGSEHTHQAQKVEK 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|406575280|ref|ZP_11050988.1| 50S ribosomal protein L13 [Janibacter hoylei PVAS-1]
gi|404555315|gb|EKA60809.1| 50S ribosomal protein L13 [Janibacter hoylei PVAS-1]
Length = 147
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + E +YR+ GH L E +E+ PT A+ KA+ MLPRN
Sbjct: 53 FVIIINADKIALTGAKAEQKRAYRHSGHPGGLSSMNYTEMLEKHPTRAVEKAIQGMLPRN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L + KL+++ G+EHP + PY +
Sbjct: 113 TLGRQQLGKLKVYAGAEHPHAAQQPTPYTI 142
>gi|148273764|ref|YP_001223325.1| 50S ribosomal protein L13 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831694|emb|CAN02663.1| 50S ribosomal protein L13 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 148
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L T E +E+ PT A+ KA+ MLP+N
Sbjct: 54 FVIIVNAEKVALTGQKLEKKLAYRHSGYPGGLTATTYVEMLEKHPTRAVEKAIRGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L + +KL+++ G EHP + PY +
Sbjct: 114 SLGAAQLKKLKVYAGPEHPHAAQQPTPYTL 143
>gi|170780770|ref|YP_001709102.1| 50S ribosomal protein L13 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155338|emb|CAQ00441.1| 50S ribosomal protein L13 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 172
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L T E +E+ PT A+ KA+ MLP+N
Sbjct: 78 FVIIVNAEKVALTGQKLEKKLAYRHSGYPGGLTATTYVEMLEKHPTRAVEKAIRGMLPKN 137
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L + +KL+++ G EHP + PY +
Sbjct: 138 SLGAAQLKKLKVYAGPEHPHAAQQPTPYTL 167
>gi|184200292|ref|YP_001854499.1| 50S ribosomal protein L13 [Kocuria rhizophila DC2201]
gi|226702871|sp|B2GJ23.1|RL13_KOCRD RecName: Full=50S ribosomal protein L13
gi|183580522|dbj|BAG28993.1| 50S ribosomal protein L13 [Kocuria rhizophila DC2201]
Length = 147
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK + E +E++PT A+ KA+ MLP+NKL + KL+++ G+EHP + +P
Sbjct: 80 YPGGLKSTSYAELLEKNPTRAVEKAIKGMLPKNKLAAQQLSKLKVYAGAEHPHQAQQPKP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|15606909|ref|NP_214290.1| 50S ribosomal protein L13 [Aquifex aeolicus VF5]
gi|7674160|sp|O67722.1|RL13_AQUAE RecName: Full=50S ribosomal protein L13
gi|2984157|gb|AAC07691.1| ribosomal protein L13 [Aquifex aeolicus VF5]
Length = 144
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
RY G LKERTLK +E P E IR AV RMLP+N+L +KL+++ G EHP
Sbjct: 79 RYPGGLKERTLKWMLENKPEEVIRLAVKRMLPKNRLGHRMLKKLKVYRGPEHP 131
>gi|307110501|gb|EFN58737.1| hypothetical protein CHLNCDRAFT_19927, partial [Chlorella
variabilis]
Length = 125
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G LKERT K+ + P +R AVL MLP+N LR RKLRIF G H F
Sbjct: 71 YPGGLKERTAKQMAAKKPDAVLRGAVLGMLPKNNLRRSMARKLRIFAGERHTF 123
>gi|288817893|ref|YP_003432240.1| 50S ribosomal protein L13 [Hydrogenobacter thermophilus TK-6]
gi|384128655|ref|YP_005511268.1| 50S ribosomal protein L13 [Hydrogenobacter thermophilus TK-6]
gi|288787292|dbj|BAI69039.1| ribosomal protein L13 [Hydrogenobacter thermophilus TK-6]
gi|308751492|gb|ADO44975.1| ribosomal protein L13 [Hydrogenobacter thermophilus TK-6]
Length = 144
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERTLK +E P E IR AV RMLP+N+L ++L+++ GSEHP
Sbjct: 80 YPGGIKERTLKWMLENKPEEVIRLAVKRMLPKNRLGHRMLKRLKVYSGSEHP 131
>gi|336441330|gb|AEI54890.1| 50S ribosomal protein L13 [Mycobacterium chelonae]
Length = 147
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+ + + + G L++R++ EQ+E+ PT + KA++ MLP+NKL +RKL+++ G
Sbjct: 69 LTDKFAYRHSGFPGGLRKRSIGEQLEKFPTRTVEKAIIGMLPKNKLGRQIERKLKVYAGP 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|363894130|ref|ZP_09321220.1| 50S ribosomal protein L13 [Eubacteriaceae bacterium ACC19a]
gi|361962873|gb|EHL15971.1| 50S ribosomal protein L13 [Eubacteriaceae bacterium ACC19a]
Length = 142
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG+LKE K+ E+ P E IR +V MLP+NKLR ++LRIF GSEH + +E
Sbjct: 80 YIGNLKEINFKKLQEKKPEEIIRLSVSGMLPKNKLRAPMMKRLRIFAGSEHVHQAQNVEN 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|448823045|ref|YP_007416210.1| 50S ribosomal protein L13 [Corynebacterium urealyticum DSM 7111]
gi|448276542|gb|AGE35966.1| 50S ribosomal protein L13 [Corynebacterium urealyticum DSM 7111]
Length = 147
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E +P I +AV M+P+NKL + +KLR+F GSEHP+ + E
Sbjct: 80 YPGGLKSMTLGRSLELNPERVIEEAVRGMMPQNKLSNASVKKLRVFAGSEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|325188109|emb|CCA22650.1| 50S ribosomal protein L13 putative [Albugo laibachii Nc14]
Length = 142
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
G LKERT KE R P E +RKAV MLP+NK+R + +KL+IF EH F D+
Sbjct: 81 GGLKERTAKEMFARKPEEILRKAVYGMLPKNKMRKLQIQKLKIFLDEEHDFQDK 134
>gi|336441332|gb|AEI54891.1| 50S ribosomal protein L13 [Mycobacterium immunogenum]
Length = 147
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+ + + + G L++R++ EQ+E+ PT + KA++ MLP+NKL +RKL+++ G
Sbjct: 69 LTDKFAYRHSGFPGGLRKRSVGEQLEKFPTRTVEKAIIGMLPKNKLGRQIERKLKVYAGP 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|296165846|ref|ZP_06848336.1| 50S ribosomal protein L13 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295898802|gb|EFG78318.1| 50S ribosomal protein L13 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 147
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ + ++YR Y G L RT E ME+ P + KA++ MLP+N
Sbjct: 53 FVIVINADKVALSGDKLQSKLAYRHSGYPGGLHSRTTGELMEKHPDRVVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL RKL ++ G EHP + PY
Sbjct: 113 KLSRQIQRKLHVYAGPEHPHAAQKPVPY 140
>gi|172040055|ref|YP_001799769.1| 50S ribosomal protein L13 [Corynebacterium urealyticum DSM 7109]
gi|171851359|emb|CAQ04335.1| 50S ribosomal protein L13 [Corynebacterium urealyticum DSM 7109]
Length = 190
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E +P I +AV M+P+NKL + +KLR+F GSEHP+ + E
Sbjct: 123 YPGGLKSMTLGRSLELNPERVIEEAVRGMMPQNKLSNASVKKLRVFAGSEHPYAAQKPET 182
Query: 89 Y 89
Y
Sbjct: 183 Y 183
>gi|406918325|gb|EKD56906.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 134
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+ S+ Y G L+E TL++ +++DP I AV MLP+NKL+D R +L++FPG+
Sbjct: 59 LTDKSYYSHSGYPGGLREITLEQLLKKDPRRVIENAVKNMLPKNKLQDRRMVRLKVFPGT 118
Query: 78 EHPF 81
EH +
Sbjct: 119 EHKY 122
>gi|335420379|ref|ZP_08551417.1| 50S ribosomal protein L13 [Salinisphaera shabanensis E1L3A]
gi|334894738|gb|EGM32923.1| 50S ribosomal protein L13 [Salinisphaera shabanensis E1L3A]
Length = 142
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRML 58
+ ++V + + + + YR Y+G+LK TL++Q+ P I AV ML
Sbjct: 50 VGDHIVVVNASKIKVTGKKPQQKIYYRFTGYVGNLKSITLEDQLAAHPERVIEHAVKGML 109
Query: 59 PRNKLRDDRDRKLRIFPGSEHP 80
P+N L RKLR++PG+EHP
Sbjct: 110 PKNPLGRQMARKLRVYPGAEHP 131
>gi|291278678|ref|YP_003495513.1| 50S ribosomal protein L13 [Deferribacter desulfuricans SSM1]
gi|290753380|dbj|BAI79757.1| 50S ribosomal protein L13 [Deferribacter desulfuricans SSM1]
Length = 141
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 13/85 (15%)
Query: 9 FILRNLFILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVL 55
FI F++ +N D++ V+ YR Y+G LK+RTL+E +++ P E +R AV
Sbjct: 46 FIDTGDFVVVINADKIHVTGDKLKSKIYYRHSGYLGGLKQRTLEEMLDKKPEEVLRLAVK 105
Query: 56 RMLPRNKLRDDRDRKLRIFPGSEHP 80
RMLP+N+L +KL+I+ +EHP
Sbjct: 106 RMLPKNRLGRKMLKKLKIYASNEHP 130
>gi|400975432|ref|ZP_10802663.1| 50S ribosomal protein L13 [Salinibacterium sp. PAMC 21357]
Length = 148
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L T E +E+ PT A+ KAV MLP+N L + KL+++ G+EHP + P
Sbjct: 81 YPGGLTATTYSEMLEKHPTRAVEKAVRGMLPKNSLGRAQLSKLKVYAGTEHPHAAQQPTP 140
Query: 89 YVM 91
Y +
Sbjct: 141 YTL 143
>gi|383761335|ref|YP_005440317.1| 50S ribosomal protein L13 [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381603|dbj|BAL98419.1| 50S ribosomal protein L13 [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 133
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
RY G LK RT++E M+R P I +AV M+P+NKL + +KLRI+ G +HP G
Sbjct: 70 RYPGGLKSRTMREMMDRFPERVIYEAVRGMMPKNKLGRAQMKKLRIYTGDQHPHG 124
>gi|206889198|ref|YP_002249427.1| ribosomal protein L13 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206890859|ref|YP_002249377.1| 50S ribosomal protein L13 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741136|gb|ACI20193.1| ribosomal protein L13 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742797|gb|ACI21854.1| ribosomal protein L13 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 143
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LK TLKE++E++P E I AV MLP+ +L +KL+++ GSEHP + EP
Sbjct: 80 YMGNLKAETLKERLEKEPEEVIVDAVWGMLPKTRLGRKMIKKLKVYRGSEHPHIAQKPEP 139
>gi|51245179|ref|YP_065063.1| 50S ribosomal protein L13 [Desulfotalea psychrophila LSv54]
gi|81692864|sp|Q6ANL8.1|RL13_DESPS RecName: Full=50S ribosomal protein L13
gi|50876216|emb|CAG36056.1| probable 50S ribosomal protein L13 [Desulfotalea psychrophila
LSv54]
Length = 142
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KE + KE +E+ PT+ I KAV MLP+NK+ + +KL+++ G+ HP
Sbjct: 80 YIGGIKETSAKELLEKHPTDLITKAVRGMLPKNKMGRAQLKKLKVYVGAAHP 131
>gi|257069453|ref|YP_003155708.1| 50S ribosomal protein L13P [Brachybacterium faecium DSM 4810]
gi|256560271|gb|ACU86118.1| LSU ribosomal protein L13P [Brachybacterium faecium DSM 4810]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L+ E +E++P A+ KA+ MLP+N
Sbjct: 53 FVIIINADKVALTGNKREAKLAYRHSGYPGGLRGTPYSELLEKNPERAVEKAIRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL D + KL+++ G+EHP + P+ +
Sbjct: 113 KLADQQLNKLKVYAGAEHPHAAQQPVPFTI 142
>gi|183981126|ref|YP_001849417.1| 50S ribosomal protein L13 [Mycobacterium marinum M]
gi|443489595|ref|YP_007367742.1| 50S ribosomal protein L13, RplM [Mycobacterium liflandii 128FXT]
gi|226702885|sp|B2HCZ0.1|RL13_MYCMM RecName: Full=50S ribosomal protein L13
gi|183174452|gb|ACC39562.1| 50S ribosomal protein L13, RplM [Mycobacterium marinum M]
gi|442582092|gb|AGC61235.1| 50S ribosomal protein L13, RplM [Mycobacterium liflandii 128FXT]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDE-----MSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +++++E M+ S+ Y G L++R++ E ME+ P + KA++ MLP+N
Sbjct: 53 FVIVINADKVAISNEKLRNKMAYSHSGYPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KLR++ G EHP
Sbjct: 113 KLSRQIQSKLRVYAGPEHP 131
>gi|406977388|gb|EKD99559.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 140
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 6 VVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
VV + + + DE V + Y G L+ TL +R PTE +R AV MLPRNK
Sbjct: 55 VVVTNVEKIAVTGNKDEKKVYHHYTGFPGGLRTETLGHMRKRKPTEILRLAVTNMLPRNK 114
Query: 63 LRDDRDRKLRIFPGSEHP 80
LR R L I+ G+EHP
Sbjct: 115 LRKLRMANLYIYAGAEHP 132
>gi|317052254|ref|YP_004113370.1| 50S ribosomal protein L13 [Desulfurispirillum indicum S5]
gi|316947338|gb|ADU66814.1| ribosomal protein L13 [Desulfurispirillum indicum S5]
Length = 141
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + E V Y Y G LK K+ + R P E I KAV MLP+N
Sbjct: 52 YVVVVNADKIEVSGRKAEQKVYYHHTWYTGGLKAEAYKDLLARKPEEVITKAVKGMLPKN 111
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEP 88
KL D ++LR++ G EHP +P
Sbjct: 112 KLADKMIKQLRVYAGPEHPHAGANPQP 138
>gi|333991909|ref|YP_004524523.1| 50S ribosomal protein L13 [Mycobacterium sp. JDM601]
gi|333487877|gb|AEF37269.1| 50S ribosomal protein L13 RplM [Mycobacterium sp. JDM601]
Length = 147
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L++R+L E MER+P + KA++ MLP+
Sbjct: 53 FVIVINADKVAISGDKLQKKMAYRHSGYPGGLRKRSLGELMERNPDRVVEKAIIGMLPKT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KLR++ G EHP + PY
Sbjct: 113 KLGRQIKTKLRVYAGPEHPHTAQQPVPY 140
>gi|284043342|ref|YP_003393682.1| 50S ribosomal protein L13 [Conexibacter woesei DSM 14684]
gi|283947563|gb|ADB50307.1| ribosomal protein L13 [Conexibacter woesei DSM 14684]
Length = 144
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Query: 15 FILSLNDE-MSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N E +SVS YR+ G+ L+ RTL+E +ER P E IR AV MLPRN
Sbjct: 53 FVVVINAEKISVSGNKRADKRYYRHTGYPGGLRSRTLEEMLERRPEEVIRIAVKGMLPRN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEP 88
+L + KL+++ G +HP + +P
Sbjct: 113 RLARKQITKLKVYAGPDHPHAAQQPQP 139
>gi|15827097|ref|NP_301360.1| 50S ribosomal protein L13 [Mycobacterium leprae TN]
gi|221229575|ref|YP_002502991.1| 50S ribosomal protein L13 [Mycobacterium leprae Br4923]
gi|585864|sp|P38014.1|RL13_MYCLE RecName: Full=50S ribosomal protein L13
gi|254798507|sp|B8ZUB9.1|RL13_MYCLB RecName: Full=50S ribosomal protein L13
gi|467123|gb|AAA17305.1| rplM [Mycobacterium leprae]
gi|13092645|emb|CAC29872.1| 50S ribosomal protein L13 [Mycobacterium leprae]
gi|219932682|emb|CAR70457.1| 50S ribosomal protein L13 [Mycobacterium leprae Br4923]
Length = 147
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L++RT+ E M++ P + KA++ MLP+N
Sbjct: 53 FVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL RKLR++ G +HP
Sbjct: 113 KLSRQIQRKLRVYAGPDHP 131
>gi|340905422|gb|EGS17790.1| ribosomal protein L23-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 188
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ + V YR+ G LK+ T+ E ME+ E +R+AV MLP+
Sbjct: 70 YVVVTNCAALYTTGMKKWRKVYYRHNTRPGSLKKITMDELMEKHGGAEVLRRAVSGMLPK 129
Query: 61 NKLRDDRDRKLRIFPGSEHP-------FGDRPL 86
N+LRD R +L+ F G HP FG +P+
Sbjct: 130 NRLRDKRLARLKCFEGDAHPYKKNLIQFGGKPV 162
>gi|164686560|ref|ZP_02210588.1| hypothetical protein CLOBAR_00127 [Clostridium bartlettii DSM
16795]
gi|164604429|gb|EDQ97894.1| ribosomal protein L13 [Clostridium bartlettii DSM 16795]
Length = 142
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE + +E ME+ P E + AV MLP+NKLR +LR+F G+EH
Sbjct: 80 YVGGLKEISYREMMEKKPEEVVAHAVSGMLPKNKLRARMMTRLRVFAGAEH 130
>gi|385996313|ref|YP_005914611.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CCDC5079]
gi|339296267|gb|AEJ48378.1| 50S ribosomal protein L13 [Mycobacterium tuberculosis CCDC5079]
Length = 147
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L +RT+ E M+R P + KA+L MLP+N
Sbjct: 53 FVIVINADKVAISGDKLQHKMVYRHSGYPGGLHKRTIGELMQRHPDRVVEKAILGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+ RKLR++ G EHP + PY
Sbjct: 113 RRSRQIQRKLRVYAGPEHPHSAQQPVPY 140
>gi|50955535|ref|YP_062823.1| 50S ribosomal protein L13 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50952017|gb|AAT89718.1| 50S ribosomal protein L13 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 148
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK T E +E++P A+ KAV MLP+N + + RKL+++ GSEHP + +
Sbjct: 81 YPGGLKAVTYAELLEKNPVRAVEKAVRGMLPKNSIGRAQFRKLKVYTGSEHPHAAQQPKA 140
Query: 89 YVM 91
Y +
Sbjct: 141 YAL 143
>gi|385652317|ref|ZP_10046870.1| 50S ribosomal protein L13 [Leucobacter chromiiresistens JG 31]
Length = 148
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ + E +E++P A+ KA+ MLP+N L D RKL+++ G+EHP + P
Sbjct: 81 YPGGLRSVSYTELLEKNPERAVEKAIRGMLPKNSLGADLFRKLKVYAGAEHPHAAQQPTP 140
Query: 89 YVM 91
Y
Sbjct: 141 YTF 143
>gi|451943306|ref|YP_007463942.1| 50S ribosomal protein L13 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451902693|gb|AGF71580.1| 50S ribosomal protein L13 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 147
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + I S E + YR Y G LK TL +E P + +A+ M+P N
Sbjct: 53 HVVVINADKVHISSNKREREMRYRHSGYPGGLKTMTLGRSLELHPERVVEEAIKGMMPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL +F GSEHP+ + E Y
Sbjct: 113 KLSNSSAKKLHVFAGSEHPYAGQKPETY 140
>gi|320160444|ref|YP_004173668.1| 50S ribosomal protein L13 [Anaerolinea thermophila UNI-1]
gi|319994297|dbj|BAJ63068.1| 50S ribosomal protein L13 [Anaerolinea thermophila UNI-1]
Length = 143
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK +L++Q+++ P IR AV MLP NKL KL+++PGSEHP
Sbjct: 82 YPGGLKAISLRDQLQKHPERVIRAAVWGMLPHNKLGRRLIEKLKVYPGSEHP 133
>gi|452853426|ref|YP_007495110.1| 50S ribosomal protein L13 [Desulfovibrio piezophilus]
gi|451897080|emb|CCH49959.1| 50S ribosomal protein L13 [Desulfovibrio piezophilus]
Length = 142
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LKE+TL+E +E+ P I AV MLP+N+L + +KL+++ GSEHP
Sbjct: 82 GGLKEKTLREMLEKKPENVITAAVKGMLPKNRLAAQQLKKLKVYAGSEHP 131
>gi|317507696|ref|ZP_07965403.1| ribosomal protein L13 [Segniliparus rugosus ATCC BAA-974]
gi|316254023|gb|EFV13386.1| ribosomal protein L13 [Segniliparus rugosus ATCC BAA-974]
Length = 147
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLNDEM---SVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + +R+ GH LK R + E ++ DP + KAV M+PRN
Sbjct: 53 FVVIVNAGKVALTGNKRADKLVHRHSGHPGGLKSRAIGELLQSDPRRVVEKAVKGMIPRN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL +RKL+++ G EHP + PY +
Sbjct: 113 KLGRAVERKLKVYAGPEHPHQAQQPVPYTI 142
>gi|227505259|ref|ZP_03935308.1| 50S ribosomal protein L13 [Corynebacterium striatum ATCC 6940]
gi|227198158|gb|EEI78206.1| 50S ribosomal protein L13 [Corynebacterium striatum ATCC 6940]
Length = 187
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I +AV M+P NKL D +KL +F G EHP+ G +P
Sbjct: 120 YPGGLKSMTLGQSLDTNPVRVIEEAVKGMMPHNKLSDASIKKLHVFVGEEHPYAGQKP 177
>gi|358446932|ref|ZP_09157470.1| 50S ribosomal protein L13 [Corynebacterium casei UCMA 3821]
gi|356607124|emb|CCE55822.1| 50S ribosomal protein L13 [Corynebacterium casei UCMA 3821]
Length = 168
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G L+ TL + ++ +P I +AV M+P NKL +KL +F G+EHP+ G +P
Sbjct: 101 YPGGLRTMTLGQSLDANPARVIEEAVTGMMPHNKLSSSSAKKLHVFNGAEHPYAGQKP 158
>gi|404493537|ref|YP_006717643.1| 50S ribosomal protein L13 [Pelobacter carbinolicus DSM 2380]
gi|118573425|sp|Q3A3B6.1|RL13_PELCD RecName: Full=50S ribosomal protein L13
gi|77545579|gb|ABA89141.1| ribosomal protein L13 [Pelobacter carbinolicus DSM 2380]
Length = 142
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G L++ + +E+ P + I+KAV MLP+NKL D RKL+++ GS+HP +PLE
Sbjct: 80 YPGGLRQANAAQMLEKKPEDLIKKAVKGMLPKNKLGRDMFRKLKVYTGSDHPHAAQQPLE 139
>gi|88856974|ref|ZP_01131624.1| 50S ribosomal protein L13 [marine actinobacterium PHSC20C1]
gi|88813791|gb|EAR23663.1| 50S ribosomal protein L13 [marine actinobacterium PHSC20C1]
Length = 148
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L T E +E+ PT A+ KA+ MLP+N L + KL+++ G+EHP + P
Sbjct: 81 YPGGLTATTYSEMLEKHPTRAVEKAIRGMLPKNSLGRAQLTKLKVYAGAEHPHAAQQPMP 140
Query: 89 YVM 91
Y +
Sbjct: 141 YTL 143
>gi|363890945|ref|ZP_09318239.1| 50S ribosomal protein L13 [Eubacteriaceae bacterium CM5]
gi|363893118|ref|ZP_09320257.1| ribosomal protein L13 [Eubacteriaceae bacterium CM2]
gi|402838200|ref|ZP_10886712.1| ribosomal protein L13 [Eubacteriaceae bacterium OBRC8]
gi|361961642|gb|EHL14825.1| ribosomal protein L13 [Eubacteriaceae bacterium CM2]
gi|361962712|gb|EHL15821.1| 50S ribosomal protein L13 [Eubacteriaceae bacterium CM5]
gi|402273704|gb|EJU22899.1| ribosomal protein L13 [Eubacteriaceae bacterium OBRC8]
Length = 142
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG+LKE K+ E+ P E IR +V MLP+NKLR ++LRIF G EH + +E
Sbjct: 80 YIGNLKEINFKKLQEKKPEEIIRLSVSGMLPKNKLRAPMMKRLRIFAGPEHVHQAQNVEN 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|451949125|ref|YP_007469720.1| LSU ribosomal protein L13P [Desulfocapsa sulfexigens DSM 10523]
gi|451908473|gb|AGF80067.1| LSU ribosomal protein L13P [Desulfocapsa sulfexigens DSM 10523]
Length = 142
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KE T KE + + PT+ + KAV MLP+NKL + +KL+++ GS+HP
Sbjct: 80 YIGSMKEITAKELVVKHPTDLLMKAVKGMLPKNKLGRQQLKKLKLYTGSDHP 131
>gi|440793270|gb|ELR14457.1| ribosomal protein L13, putative [Acanthamoeba castellanii str.
Neff]
Length = 228
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE K+ + + P IR AV +MLP+NKLR +R ++LR+F G EHP
Sbjct: 67 YPGGLKEVKAKDMLYKHPDAIIRTAVSKMLPKNKLRWERLKRLRVFVGEEHP 118
>gi|417933106|ref|ZP_12576440.1| ribosomal protein L13 [Propionibacterium acnes SK182B-JCVI]
gi|340773025|gb|EGR95520.1| ribosomal protein L13 [Propionibacterium acnes SK182B-JCVI]
Length = 147
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E +E+DP A+ +AV M+P+N
Sbjct: 53 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLEKDPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|406982135|gb|EKE03495.1| hypothetical protein ACD_20C00197G0010 [uncultured bacterium]
Length = 146
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 8 FFILRN---LFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F IL N + + + + Y + G+ L+ + K+ M++ PT AI KAV MLP N
Sbjct: 53 FVILVNADKITVTGSKETDKIYYHHTGYPSGLRSISFKDMMKKHPTRAIEKAVRGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPF-GDRPLE 87
L D + +KL+++ G EHP +P+E
Sbjct: 113 TLGDQQFQKLKVYAGPEHPHQAQQPIE 139
>gi|269121326|ref|YP_003309503.1| 50S ribosomal protein L13 [Sebaldella termitidis ATCC 33386]
gi|268615204|gb|ACZ09572.1| ribosomal protein L13 [Sebaldella termitidis ATCC 33386]
Length = 145
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 8 FFILRNL--FILSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N F+++ N + Y Y G LK R+L+E +++ PTE IR AV MLP+N
Sbjct: 56 FVVVTNADKFVVTGNKMLDKKYYRHSGYPGGLKTRSLEEMLDKKPTEVIRIAVKNMLPKN 115
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +L+I+ G++H
Sbjct: 116 KLGREMINRLKIYKGTDH 133
>gi|299117320|emb|CBN75280.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 172
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
+ G LKER +Q+ R P E +R+AV+ MLP+N LR KL I+PG HP DR
Sbjct: 80 FPGGLKERPADDQLVRKPEEILRRAVMGMLPKNSLRKRMVTKLLIYPGPSHPHDDR 135
>gi|19113545|ref|NP_596753.1| mitochondrial ribosomal protein subunit L13 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74654669|sp|O60118.1|RM23_SCHPO RecName: Full=54S ribosomal protein L23, mitochondrial; Flags:
Precursor
gi|3133098|emb|CAA19024.1| mitochondrial ribosomal protein subunit L13 (predicted)
[Schizosaccharomyces pombe]
Length = 157
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKE-QMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GHLKE T++E +R + +R+AV MLPRNKL D R ++L I+ G+EHP+
Sbjct: 83 GHLKEWTMEEMAAKRGHKDLLRRAVGGMLPRNKLWDRRMKRLYIYDGAEHPY 134
>gi|323357281|ref|YP_004223677.1| 50S ribosomal protein L13 [Microbacterium testaceum StLB037]
gi|323273652|dbj|BAJ73797.1| ribosomal protein L13 [Microbacterium testaceum StLB037]
Length = 148
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK T E +E++P A+ KA+ MLP+N L + +KL+++ G+EHP G +
Sbjct: 81 YPGGLKSVTYDELLEKNPVRAVEKAIRGMLPKNSLGAAQLKKLKVYRGAEHPHGAQQPTA 140
Query: 89 YVM 91
Y
Sbjct: 141 YTF 143
>gi|41410343|ref|NP_963179.1| 50S ribosomal protein L13 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118466515|ref|YP_883521.1| 50S ribosomal protein L13 [Mycobacterium avium 104]
gi|254776816|ref|ZP_05218332.1| 50S ribosomal protein L13 [Mycobacterium avium subsp. avium ATCC
25291]
gi|417747754|ref|ZP_12396213.1| ribosomal protein L13, bacterial type [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440779727|ref|ZP_20958435.1| 50S ribosomal protein L13 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|81700271|sp|Q73S31.1|RL13_MYCPA RecName: Full=50S ribosomal protein L13
gi|166230996|sp|A0QKT3.1|RL13_MYCA1 RecName: Full=50S ribosomal protein L13
gi|41399177|gb|AAS06795.1| RplM [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167802|gb|ABK68699.1| ribosomal protein L13 [Mycobacterium avium 104]
gi|336460692|gb|EGO39582.1| ribosomal protein L13, bacterial type [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436719757|gb|ELP44114.1| 50S ribosomal protein L13 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 147
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
++YR Y G L+ RT+ E M++ P + A++ MLP+NKL RKLR++ G EHP
Sbjct: 73 LAYRHSGYPGGLRSRTIGELMQKHPDRVVADAIVGMLPKNKLSRQIQRKLRVYAGPEHPH 132
Query: 82 GDRPLEPY 89
+ PY
Sbjct: 133 TAQQPIPY 140
>gi|406929961|gb|EKD65422.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 147
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
YRY G+ L+ +L E +R P E IR AV MLP+NKLRD +L +F G EHP+ D
Sbjct: 76 YRYSGYPSGLRIESLGELRQRKPEEVIRHAVSGMLPQNKLRDRMLARLFVFEGEEHPYKD 135
Query: 84 R 84
+
Sbjct: 136 K 136
>gi|427391395|ref|ZP_18885801.1| 50S ribosomal protein L13 [Actinobaculum massiliae ACS-171-V-Col2]
gi|425732038|gb|EKU94850.1| 50S ribosomal protein L13 [Actinobaculum massiliae ACS-171-V-Col2]
Length = 147
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLN-----DEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L D+MS + Y G LK + E + P +AI +AV M+PRN
Sbjct: 53 FVIVVNASKVALTGSKLRDKMSYHHSGYPGGLKATSYAELLASQPEKAIEQAVKGMIPRN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + ++L+++ G EHP + EPY
Sbjct: 113 KLGRQQIKRLKVYAGGEHPHVAQQPEPY 140
>gi|163784932|ref|ZP_02179690.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879800|gb|EDP73546.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1]
Length = 150
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK RTLK +E P E +R AV RMLP+NKL+ ++L+++ GSEH
Sbjct: 80 YPGGLKTRTLKWMLENKPEEVVRLAVERMLPKNKLQKRFMKRLKVYKGSEH 130
>gi|28572316|ref|NP_789096.1| 50S ribosomal protein L13 [Tropheryma whipplei TW08/27]
gi|28410447|emb|CAD66833.1| 50S ribosomal protein L13 [Tropheryma whipplei TW08/27]
Length = 141
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK+R + ++ P + KAV MLP+NKL R LR++PG +HP + +P
Sbjct: 71 YPGGLKKRGFSDVFQKSPERVLEKAVKGMLPKNKLGRSVFRNLRVYPGQDHPHAAQ--KP 128
Query: 89 YVMPPRRVREL 99
V P RV ++
Sbjct: 129 SVYAPTRVAQV 139
>gi|28493111|ref|NP_787272.1| 50S ribosomal protein L13 [Tropheryma whipplei str. Twist]
gi|28476151|gb|AAO44241.1| 50S ribosomal protein L13 [Tropheryma whipplei str. Twist]
Length = 142
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK+R + ++ P + KAV MLP+NKL R LR++PG +HP + +P
Sbjct: 72 YPGGLKKRGFSDVFQKSPERVLEKAVKGMLPKNKLGRSVFRNLRVYPGQDHPHAAQ--KP 129
Query: 89 YVMPPRRVREL 99
V P RV ++
Sbjct: 130 SVYAPTRVAQV 140
>gi|118471450|ref|YP_885936.1| 50S ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155]
gi|399985938|ref|YP_006566287.1| 50S ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155]
gi|441205062|ref|ZP_20972423.1| ribosomal protein L13 [Mycobacterium smegmatis MKD8]
gi|166230998|sp|A0QSP8.1|RL13_MYCS2 RecName: Full=50S ribosomal protein L13
gi|118172737|gb|ABK73633.1| ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155]
gi|399230499|gb|AFP37992.1| 50S ribosomal protein L13 [Mycobacterium smegmatis str. MC2 155]
gi|440629082|gb|ELQ90873.1| ribosomal protein L13 [Mycobacterium smegmatis MKD8]
Length = 147
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D+++VS YR Y G L++RT+ E +E+ PT + A++ MLP N
Sbjct: 53 FVIVINADKIAVSGDKLTKKFAYRHSGYPGGLRKRTIGELLEKHPTRVVENAIIGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G +HP
Sbjct: 113 KLGRQIQKKLKVYAGPDHP 131
>gi|374307865|ref|YP_005054296.1| 50S ribosomal protein L13 [Filifactor alocis ATCC 35896]
gi|291166124|gb|EFE28170.1| 50S ribosomal protein L13 [Filifactor alocis ATCC 35896]
Length = 142
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKE + K+ ++++P E +R AV ML +N+LRD ++L+I+ GSEH
Sbjct: 80 YFGGLKEVSFKDMLQKNPEEIVRHAVYGMLSKNRLRDPMMKRLKIYVGSEH 130
>gi|406960524|gb|EKD87554.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 138
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV +++ + ++ Y G+ K + L + PTE IR+AV MLP+N
Sbjct: 55 YVVVINAKHVAVTGKKEKQKTYTNYSGYPGGDKTKALWQMRIEKPTEIIRRAVFGMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
KLRD +L I+P EHP GD+
Sbjct: 115 KLRDIMITRLYIYPEKEHPHGDK 137
>gi|397670844|ref|YP_006512379.1| 50S ribosomal protein L13 [Propionibacterium propionicum F0230a]
gi|395142363|gb|AFN46470.1| ribosomal protein L13 [Propionibacterium propionicum F0230a]
Length = 151
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLN-----DEMSVSYRY-IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L D+M S+ G LK ++ E +E++P +A+ +AV MLP+N
Sbjct: 57 FVIVVNASKIALTGNKRTDDMRYSHSGRPGGLKAVSIGELLEKNPRKAVERAVWGMLPKN 116
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++PG EHP + +P+
Sbjct: 117 KLSRRLIGKLKVYPGPEHPHAAQKPQPF 144
>gi|383775826|ref|YP_005460392.1| 50S ribosomal protein L13 [Actinoplanes missouriensis 431]
gi|381369058|dbj|BAL85876.1| putative ribosomal protein L13 [Actinoplanes missouriensis 431]
Length = 147
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR Y G LK+ +E + + P +AI AV MLP N
Sbjct: 53 FVVIINAGKVALTGNKRQTKVAYRHSGYPGGLKQVGYEELLTKRPEKAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++PG+EHP + +P+
Sbjct: 113 KLARQIIKKLKVYPGAEHPHAAQQPQPF 140
>gi|373251910|ref|ZP_09540028.1| 50S ribosomal protein L13 [Nesterenkonia sp. F]
Length = 147
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G ++ ++ MER PT A+ +AV M+P NKL + +KL ++ GSEHP + +PY
Sbjct: 82 GGIRSANFEQMMERHPTRAVEQAVKGMVPHNKLGATQLKKLHVYAGSEHPHAAQKPKPY 140
>gi|336326384|ref|YP_004606350.1| 50S ribosomal protein L13 [Corynebacterium resistens DSM 45100]
gi|336102366|gb|AEI10186.1| 50S ribosomal protein L13 [Corynebacterium resistens DSM 45100]
Length = 147
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +L +E P I +AV M+P NKL + +KL ++ GSEHPF D+ E
Sbjct: 80 YPGGLKTMSLGRSLELHPERVIEEAVRGMMPSNKLSNASVKKLHVYAGSEHPFEDKKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|336373792|gb|EGO02130.1| hypothetical protein SERLA73DRAFT_132957 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386608|gb|EGO27754.1| hypothetical protein SERLADRAFT_383222 [Serpula lacrymans var.
lacrymans S7.9]
Length = 167
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV +N+ + DE V YR Y G LKE K+ M+ P E IR AV MLP+
Sbjct: 54 YVVVTNAKNIKVTGRKDEQLV-YRKHTMYPGGLKETEYKDLMDSKPYEIIRHAVSGMLPK 112
Query: 61 NKLRDDRDRKLRIFPGS 77
NKLR+ R +L++F GS
Sbjct: 113 NKLRERRLSRLKVFAGS 129
>gi|308270355|emb|CBX26967.1| 50S ribosomal protein L13 [uncultured Desulfobacterium sp.]
Length = 144
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LKE T+K+ +E+ P + IR AV MLP+NKL +KL+++ G +HP
Sbjct: 82 YVGGLKEITVKKLLEKKPEDVIRFAVKGMLPKNKLGAKLYKKLKVYAGEKHP 133
>gi|406909284|gb|EKD49571.1| hypothetical protein ACD_63C00106G0010 [uncultured bacterium]
Length = 125
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIF 74
Y GH+K TLKE E++P E +RKAV MLP+NKLR+ R ++L+
Sbjct: 80 YPGHIKTITLKELFEKNPEEVLRKAVYGMLPKNKLRNGRMKRLKFL 125
>gi|423089470|ref|ZP_17077828.1| ribosomal protein L13 [Clostridium difficile 70-100-2010]
gi|357558080|gb|EHJ39587.1| ribosomal protein L13 [Clostridium difficile 70-100-2010]
Length = 143
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE + ++ M++ P E I AV MLP+NKLR +LR+F G+EH
Sbjct: 80 YVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130
>gi|380303254|ref|ZP_09852947.1| 50S ribosomal protein L13P [Brachybacterium squillarum M-6-3]
Length = 147
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L+ E +E P A+ KAV MLP+N
Sbjct: 53 FVIIINADKVALTGNKRETKLAYRHSGYPGGLRGIPYSELLETRPERAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL D + +KL+++ G EHP + P+ +
Sbjct: 113 KLADQQLKKLKVYAGPEHPHAAQQPSPFTI 142
>gi|452839232|gb|EME41171.1| hypothetical protein DOTSEDRAFT_134648 [Dothistroma septosporum
NZE10]
Length = 178
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LKE T+ + M++ E +R+AV MLP+N+LRDDR +L+ F G HP+G
Sbjct: 85 GSLKEMTMDKMMDKWGGGEVLRRAVRGMLPKNRLRDDRMARLKCFEGDAHPYG 137
>gi|296392777|ref|YP_003657661.1| 50S ribosomal protein L13 [Segniliparus rotundus DSM 44985]
gi|296179924|gb|ADG96830.1| ribosomal protein L13 [Segniliparus rotundus DSM 44985]
Length = 152
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLNDEM---SVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + +R+ GH LK R++ + ++ DP + KAV M+PRN
Sbjct: 58 FVVIVNAGKVALTGNKRADKLVHRHSGHPGGLKTRSIGQLLDSDPRRVVEKAVKGMIPRN 117
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL +RKL+++ G EHP + PY +
Sbjct: 118 KLGRAVERKLKVYAGPEHPHQAQQPVPYAI 147
>gi|350567918|ref|ZP_08936324.1| 50S ribosomal protein L13 [Propionibacterium avidum ATCC 25577]
gi|348662170|gb|EGY78839.1| 50S ribosomal protein L13 [Propionibacterium avidum ATCC 25577]
Length = 161
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E +E+DP A+ +AV M+P+N
Sbjct: 67 FVVVINASKIALTGKKATDSLRYDHSGRPGGLRVTSVGEMLEKDPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|210623221|ref|ZP_03293660.1| hypothetical protein CLOHIR_01610 [Clostridium hiranonis DSM 13275]
gi|210153758|gb|EEA84764.1| hypothetical protein CLOHIR_01610 [Clostridium hiranonis DSM 13275]
Length = 142
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE + +E M + P E + AV MLP+NKLR +LR+F G+EH
Sbjct: 80 YVGGLKEISYREMMAKKPEEVVAHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130
>gi|126697675|ref|YP_001086572.1| 50S ribosomal protein L13 [Clostridium difficile 630]
gi|254973766|ref|ZP_05270238.1| 50S ribosomal protein L13 [Clostridium difficile QCD-66c26]
gi|255091156|ref|ZP_05320634.1| 50S ribosomal protein L13 [Clostridium difficile CIP 107932]
gi|255099267|ref|ZP_05328244.1| 50S ribosomal protein L13 [Clostridium difficile QCD-63q42]
gi|255305050|ref|ZP_05349222.1| 50S ribosomal protein L13 [Clostridium difficile ATCC 43255]
gi|255312810|ref|ZP_05354393.1| 50S ribosomal protein L13 [Clostridium difficile QCD-76w55]
gi|255515569|ref|ZP_05383245.1| 50S ribosomal protein L13 [Clostridium difficile QCD-97b34]
gi|255648664|ref|ZP_05395566.1| 50S ribosomal protein L13 [Clostridium difficile QCD-37x79]
gi|255654197|ref|ZP_05399606.1| 50S ribosomal protein L13 [Clostridium difficile QCD-23m63]
gi|296449764|ref|ZP_06891533.1| 50S ribosomal protein L13 [Clostridium difficile NAP08]
gi|296877827|ref|ZP_06901850.1| 50S ribosomal protein L13 [Clostridium difficile NAP07]
gi|306518786|ref|ZP_07405133.1| 50S ribosomal protein L13 [Clostridium difficile QCD-32g58]
gi|384359434|ref|YP_006197286.1| 50S ribosomal protein L13 [Clostridium difficile BI1]
gi|423081691|ref|ZP_17070293.1| ribosomal protein L13 [Clostridium difficile 002-P50-2011]
gi|423085155|ref|ZP_17073610.1| ribosomal protein L13 [Clostridium difficile 050-P50-2011]
gi|118573393|sp|Q18CJ1.1|RL13_CLOD6 RecName: Full=50S ribosomal protein L13
gi|115249112|emb|CAJ66923.1| 50S ribosomal protein L13 [Clostridium difficile 630]
gi|296261362|gb|EFH08188.1| 50S ribosomal protein L13 [Clostridium difficile NAP08]
gi|296431169|gb|EFH16993.1| 50S ribosomal protein L13 [Clostridium difficile NAP07]
gi|357550269|gb|EHJ32094.1| ribosomal protein L13 [Clostridium difficile 002-P50-2011]
gi|357550487|gb|EHJ32301.1| ribosomal protein L13 [Clostridium difficile 050-P50-2011]
Length = 143
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE + ++ M++ P E I AV MLP+NKLR +LR+F G+EH
Sbjct: 80 YVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEH 130
>gi|383823726|ref|ZP_09978915.1| 50S ribosomal protein L13 [Mycobacterium xenopi RIVM700367]
gi|383338716|gb|EID17079.1| 50S ribosomal protein L13 [Mycobacterium xenopi RIVM700367]
Length = 147
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D+++VS YR Y G L +R L + M+R P + KA++ MLP+N
Sbjct: 53 FVIVVNADKVAVSGNKLQNKPVYRHSGYPGGLHKRMLGDLMQRHPDRVVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL RKLR++ G +HP + PY
Sbjct: 113 KLGRQIRRKLRVYAGPDHPHAAQQPIPY 140
>gi|386845785|ref|YP_006263798.1| 50S ribosomal protein L13 [Actinoplanes sp. SE50/110]
gi|359833289|gb|AEV81730.1| large subunit ribosomal protein L13 [Actinoplanes sp. SE50/110]
Length = 147
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR Y G LK+ +E + + P +AI AV MLP N
Sbjct: 53 FVVIINAGKVALTGNKRQTKVAYRHSGYPGGLKQVGYEELLSKRPEKAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++PG+EHP + +P+
Sbjct: 113 KLARQIIKKLKVYPGAEHPHAAQQPKPF 140
>gi|50293057|ref|XP_448958.1| mitochondrial 54S ribosomal protein YmL23 [Candida glabrata CBS
138]
gi|49528271|emb|CAG61928.1| unnamed protein product [Candida glabrata]
Length = 167
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G+LK T+K E + E ++KAV MLP+N+LR R +L++F G+EHP+GD Y
Sbjct: 85 GNLKLTTMKTMAENKGYGELLKKAVSGMLPKNRLRKVRLARLKVFDGAEHPYGDN-FTAY 143
Query: 90 VMPPRRVREL 99
+ +V++L
Sbjct: 144 ALKQPKVQKL 153
>gi|383806938|ref|ZP_09962499.1| 50S ribosomal protein L13 [Candidatus Aquiluna sp. IMCC13023]
gi|383299368|gb|EIC91982.1| 50S ribosomal protein L13 [Candidatus Aquiluna sp. IMCC13023]
Length = 147
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L + + ME++P A+ KA+ MLP+NKL D KL+++ GS HP + +P
Sbjct: 80 YPGGLTTTSYSDLMEKNPQRAVEKAIRGMLPKNKLGDQLIGKLKVYAGSNHPHEAQKAKP 139
Query: 89 YVM 91
+ +
Sbjct: 140 FTI 142
>gi|406931767|gb|EKD66987.1| ribosomal protein L13 [uncultured bacterium]
Length = 141
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
G LK + + ++ PTE IR AV M+P NKLRD +L I+P ++HP+ D+
Sbjct: 85 GGLKSKAFWQVLQEKPTEPIRHAVWGMIPTNKLRDRLVTRLYIYPEADHPYKDK 138
>gi|296119292|ref|ZP_06837860.1| ribosomal protein L13 [Corynebacterium ammoniagenes DSM 20306]
gi|295967684|gb|EFG80941.1| ribosomal protein L13 [Corynebacterium ammoniagenes DSM 20306]
Length = 168
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G L+ TL + ++ +P I +A++ M+P NKL +KL +F G+EHP+ G +P
Sbjct: 101 YPGGLRTMTLGQSLDANPARVIEEAIVGMMPHNKLSRSSAKKLHVFNGAEHPYAGQKP 158
>gi|256827867|ref|YP_003156595.1| 50S ribosomal protein L13 [Desulfomicrobium baculatum DSM 4028]
gi|256577043|gb|ACU88179.1| ribosomal protein L13 [Desulfomicrobium baculatum DSM 4028]
Length = 142
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YRY---IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
FI+ +N D++ V+ YRY +G L+E TL+E M + P I KAV MLP++
Sbjct: 53 FIIVINADKIKVTGQKATQKTYYRYTGYVGGLRETTLEEMMVKSPETVITKAVKGMLPKS 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 ALGFQLIKKLKVYTGTEHP 131
>gi|169865133|ref|XP_001839170.1| mitochondrial 54S ribosomal protein YmL23 [Coprinopsis cinerea
okayama7#130]
gi|116499708|gb|EAU82603.1| 50S ribosomal protein L13 [Coprinopsis cinerea okayama7#130]
Length = 176
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPR 60
YVV R++ + +E + YR + G LKE K ER P E IR AV MLP+
Sbjct: 54 YVVVTNARSVKVTGKKEEQLL-YRKHTMFPGGLKETPYKTMQERKPDEIIRHAVSGMLPK 112
Query: 61 NKLRDDRDRKLRIFPG 76
NKLRD R +L+IFPG
Sbjct: 113 NKLRDRRLERLKIFPG 128
>gi|406935930|gb|EKD69765.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 148
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V + + ++ + YR Y G LKE T + ++DPTE I AV MLP+N
Sbjct: 53 YIVVVNADQIKVTGKKEDKKIYYRHSGYPGGLKEMTFTDLQKKDPTEVIEIAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 PLGRAMLKKLKVYAGAEHP 131
>gi|227832283|ref|YP_002833990.1| 50S ribosomal protein L13 [Corynebacterium aurimucosum ATCC 700975]
gi|227453299|gb|ACP32052.1| 50S ribosomal protein L13 [Corynebacterium aurimucosum ATCC 700975]
Length = 160
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I +AV M+P NKL + +KL +F G EHP+ G +P
Sbjct: 93 YPGGLKSMTLGQSLDANPVRVIEEAVKGMMPHNKLSNASIKKLHVFVGEEHPYAGQKP 150
>gi|395205538|ref|ZP_10396169.1| 50S ribosomal protein L13 [Propionibacterium humerusii P08]
gi|422441341|ref|ZP_16518151.1| ribosomal protein L13 [Propionibacterium acnes HL037PA3]
gi|422472474|ref|ZP_16548962.1| ribosomal protein L13 [Propionibacterium acnes HL037PA2]
gi|422572161|ref|ZP_16647732.1| ribosomal protein L13 [Propionibacterium acnes HL044PA1]
gi|313836084|gb|EFS73798.1| ribosomal protein L13 [Propionibacterium acnes HL037PA2]
gi|314929620|gb|EFS93451.1| ribosomal protein L13 [Propionibacterium acnes HL044PA1]
gi|314970604|gb|EFT14702.1| ribosomal protein L13 [Propionibacterium acnes HL037PA3]
gi|328906174|gb|EGG25949.1| 50S ribosomal protein L13 [Propionibacterium humerusii P08]
Length = 147
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRYI-----GHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + + S RY G L+ ++ E +E++P A+ +AV M+P+N
Sbjct: 53 FVIVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLEKNPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|303246294|ref|ZP_07332574.1| ribosomal protein L13 [Desulfovibrio fructosovorans JJ]
gi|302492357|gb|EFL52229.1| ribosomal protein L13 [Desulfovibrio fructosovorans JJ]
Length = 142
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE +L++ +++ P E IRKAV MLP+N+L +KL+++ G HP
Sbjct: 80 WIGGLKETSLRDMLDKKPEEVIRKAVRGMLPKNRLGRAMLKKLKVYAGEAHP 131
>gi|45198921|ref|NP_985950.1| mitochondrial 54S ribosomal protein YmL23 [Ashbya gossypii ATCC
10895]
gi|44984950|gb|AAS53774.1| AFR403Wp [Ashbya gossypii ATCC 10895]
gi|374109180|gb|AEY98086.1| FAFR403Wp [Ashbya gossypii FDAG1]
Length = 156
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKE-QMERDPTEAIRKAVLRMLPR 60
YVV ++L + E + + G HLK RT++ + +E +RKAV MLP+
Sbjct: 56 YVVVTNAQDLQVTGKKWEQKTYWSHSGRPGHLKLRTMETIATNKGHSELLRKAVSGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR R +L++F GSEHP+
Sbjct: 116 NRLRKVRLARLKVFDGSEHPY 136
>gi|407927686|gb|EKG20573.1| Ribosomal protein L13 [Macrophomina phaseolina MS6]
Length = 126
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV +L + YR+ G L+E T++ ME+ E +R+AV MLP+
Sbjct: 17 YVVATNCAHLHTTGKKMQRKKYYRHTTRPGSLQEITMERLMEKWGGAEILRRAVSGMLPK 76
Query: 61 NKLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPPRRVRELRPRVRRAM 107
N+LR +R +L+ F G+ HP+ L+ P +REL P V++ +
Sbjct: 77 NRLRKERLARLKAFEGAAHPYKQNILKVAGQPASSIREL-PEVKKTL 122
>gi|406904594|gb|EKD46321.1| hypothetical protein ACD_68C00035G0005 [uncultured bacterium]
Length = 139
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
Y G +K T KE E+DP ++KAV MLP N+LR DR ++L ++ +HP+ ++
Sbjct: 81 YPGGIKNATQKELWEKDPKNVVKKAVYNMLPANRLRSDRLKRLYLYLDDKHPYQEK 136
>gi|262183861|ref|ZP_06043282.1| 50S ribosomal protein L13 [Corynebacterium aurimucosum ATCC 700975]
Length = 147
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I +AV M+P NKL + +KL +F G EHP+ G +P
Sbjct: 80 YPGGLKSMTLGQSLDANPVRVIEEAVKGMMPHNKLSNASIKKLHVFVGEEHPYAGQKP 137
>gi|300742027|ref|ZP_07072048.1| ribosomal protein L13 [Rothia dentocariosa M567]
gi|311111941|ref|YP_003983163.1| 50S ribosomal protein L13 [Rothia dentocariosa ATCC 17931]
gi|300381212|gb|EFJ77774.1| ribosomal protein L13 [Rothia dentocariosa M567]
gi|310943435|gb|ADP39729.1| 50S ribosomal protein L13 [Rothia dentocariosa ATCC 17931]
Length = 147
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G LK E +E +P A+ KAV MLP+N
Sbjct: 53 FVIIVNAEKVALTGAKLEQKRAYRHSGYPGGLKSVNYAELLETNPVRAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ G EHP
Sbjct: 113 KLAAQQIKKLKVYAGPEHP 131
>gi|229821586|ref|YP_002883112.1| 50S ribosomal protein L13 [Beutenbergia cavernae DSM 12333]
gi|259645546|sp|C5C020.1|RL13_BEUC1 RecName: Full=50S ribosomal protein L13
gi|229567499|gb|ACQ81350.1| ribosomal protein L13 [Beutenbergia cavernae DSM 12333]
Length = 147
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 8 FFILRNLFILSLN---DEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L ++ ++YR Y G LK + E +E+ P A+ KA+ M+P+N
Sbjct: 53 FVIVVNADKVALTGNKEQQKLAYRHSGYPGGLKATSYAELLEKRPERAVEKAIRGMVPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFG 82
L + RKL+++ G+EHP G
Sbjct: 113 SLGRAQMRKLKVYAGAEHPHG 133
>gi|242280584|ref|YP_002992713.1| 50S ribosomal protein L13 [Desulfovibrio salexigens DSM 2638]
gi|259645549|sp|C6C1J9.1|RL13_DESAD RecName: Full=50S ribosomal protein L13
gi|242123478|gb|ACS81174.1| ribosomal protein L13 [Desulfovibrio salexigens DSM 2638]
Length = 142
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ LN D++ V+ Y++ H LKERTLK +E+ P I AV MLP+N
Sbjct: 53 FVVVLNADKIKVTGNKMDQKTYYKHTNHPGGLKERTLKVMLEKKPEVVIETAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
+L +KL+++ G+EHP
Sbjct: 113 RLGKQMIKKLKVYAGTEHP 131
>gi|187251948|ref|YP_001876430.1| 50S ribosomal protein L13 [Elusimicrobium minutum Pei191]
gi|186972108|gb|ACC99093.1| Ribosomal protein L13 [Elusimicrobium minutum Pei191]
Length = 144
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGHLK---ERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + + E V + + G+ K E K Q E+DPT + AV RML N
Sbjct: 56 FVVVTNVGQIKVTGNKAEQKVYFSHSGYAKGGKETPFKRQFEKDPTVVLELAVKRMLDSN 115
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
KLR R ++LR+F EH F DR
Sbjct: 116 KLRAPRLKRLRLFASEEHSFADR 138
>gi|383809674|ref|ZP_09965189.1| ribosomal protein L13 [Rothia aeria F0474]
gi|383447490|gb|EID50472.1| ribosomal protein L13 [Rothia aeria F0474]
Length = 147
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G LK E +E +P A+ KAV MLP+N
Sbjct: 53 FVIIVNAEKVALTGAKLEQKRAYRHSGYPGGLKSVNYAELLETNPVRAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ G EHP
Sbjct: 113 KLAAQQIKKLKVYAGPEHP 131
>gi|367466964|ref|ZP_09466997.1| LSU ribosomal protein L13p (L13Ae) [Patulibacter sp. I11]
gi|365817879|gb|EHN12824.1| LSU ribosomal protein L13p (L13Ae) [Patulibacter sp. I11]
Length = 144
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L RT +EQ+E+ P E IRKAV M+P+N+L + KL+I+ G +HP
Sbjct: 80 YPGGLYTRTFEEQLEKRPEEIIRKAVKGMMPKNRLARKQLTKLKIYAGPDHP 131
>gi|258651416|ref|YP_003200572.1| 50S ribosomal protein L13 [Nakamurella multipartita DSM 44233]
gi|258554641|gb|ACV77583.1| ribosomal protein L13 [Nakamurella multipartita DSM 44233]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ +T+ + ++ P + KA++ MLP N L RKL+++PG+EHP + +P
Sbjct: 80 YPGGLRSQTVGQLLDTRPERLVEKAIVGMLPHNTLGRSLARKLKVYPGAEHPHAAQKPQP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|213407140|ref|XP_002174341.1| mitochondrial 54S ribosomal protein YmL23 [Schizosaccharomyces
japonicus yFS275]
gi|212002388|gb|EEB08048.1| 54S ribosomal protein L23 [Schizosaccharomyces japonicus yFS275]
Length = 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
GHLK T+KE E R E + +AV MLP+N+LRD R +L++F G E+P+ + + Y
Sbjct: 83 GHLKSWTMKEMAEKRGKKELLLRAVSGMLPKNRLRDKRLERLKLFDGPENPYHENVFKNY 142
Query: 90 VM 91
+M
Sbjct: 143 LM 144
>gi|312144214|ref|YP_003995660.1| 50S ribosomal protein L13 [Halanaerobium hydrogeniformans]
gi|311904865|gb|ADQ15306.1| ribosomal protein L13 [Halanaerobium hydrogeniformans]
Length = 142
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KE T KE + +DP I KAV MLP NKL +KL+++ G +HP
Sbjct: 80 YIGGIKEMTYKELLAKDPEFIIEKAVKGMLPGNKLGRKMIKKLKVYSGDKHP 131
>gi|255326874|ref|ZP_05367950.1| ribosomal protein L13 [Rothia mucilaginosa ATCC 25296]
gi|283457580|ref|YP_003362163.1| 50S ribosomal protein L13 [Rothia mucilaginosa DY-18]
gi|422324338|ref|ZP_16405375.1| 50S ribosomal protein L13 [Rothia mucilaginosa M508]
gi|255296091|gb|EET75432.1| ribosomal protein L13 [Rothia mucilaginosa ATCC 25296]
gi|283133578|dbj|BAI64343.1| ribosomal protein L13 [Rothia mucilaginosa DY-18]
gi|353344394|gb|EHB88706.1| 50S ribosomal protein L13 [Rothia mucilaginosa M508]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G LK E +E +P A+ KAV MLP+N
Sbjct: 53 FVIIVNAEKVALTGAKLEQKRAYRHSGYPGGLKSVNYAELLETNPVRAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ G EHP
Sbjct: 113 KLAAQQLKKLKVYAGPEHP 131
>gi|239918170|ref|YP_002957728.1| 50S ribosomal protein L13 [Micrococcus luteus NCTC 2665]
gi|289706562|ref|ZP_06502912.1| ribosomal protein L13 [Micrococcus luteus SK58]
gi|259645561|sp|C5CC33.1|RL13_MICLC RecName: Full=50S ribosomal protein L13
gi|239839377|gb|ACS31174.1| LSU ribosomal protein L13P [Micrococcus luteus NCTC 2665]
gi|289556697|gb|EFD50038.1| ribosomal protein L13 [Micrococcus luteus SK58]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E +YR Y G LK ++ E +E +P A+ KAV MLP+N
Sbjct: 53 YVIIVNAEKVALTGAKLEKKRAYRHSGYPGGLKSQSYAELLETNPVRAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLSKLKVYKGAEHP 131
>gi|319785948|ref|YP_004145423.1| 50S ribosomal protein L13 [Pseudoxanthomonas suwonensis 11-1]
gi|317464460|gb|ADV26192.1| ribosomal protein L13 [Pseudoxanthomonas suwonensis 11-1]
Length = 142
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG+LK TL + +ER P I AV MLP+ L RKL+++ GSEHP + +P
Sbjct: 80 YIGNLKSETLAQALERHPERVIEIAVKGMLPKGPLGRAMYRKLKVYSGSEHPHAAQQPKP 139
>gi|254581918|ref|XP_002496944.1| mitochondrial 54S ribosomal protein YmL23 [Zygosaccharomyces
rouxii]
gi|238939836|emb|CAR28011.1| ZYRO0D11748p [Zygosaccharomyces rouxii]
Length = 155
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 31 GHLKERTLKEQM-ERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
GHLK +++ + ++ E ++KAV MLP+NKLR R +L++F GSEHP+G+
Sbjct: 85 GHLKLTPMEKLIADKGYGETLKKAVSGMLPKNKLRKGRLERLKVFEGSEHPYGN 138
>gi|403385636|ref|ZP_10927693.1| 50S ribosomal protein L13 [Kurthia sp. JC30]
Length = 145
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
+Y G LK+RT E E+ P + + AV MLP+N L +KL ++ G+EHP + E
Sbjct: 80 QYAGGLKQRTAGEMKEKYPVQMLELAVKGMLPKNSLGRQTFKKLHVYAGAEHPHAAQQPE 139
Query: 88 PYVM 91
Y +
Sbjct: 140 AYTL 143
>gi|408418814|ref|YP_006760228.1| 50S ribosomal protein L13 RplM [Desulfobacula toluolica Tol2]
gi|405106027|emb|CCK79524.1| RplM: 50S ribosomal protein L13 [Desulfobacula toluolica Tol2]
Length = 144
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K T KE +E+ P E I+KAV MLP+N+L +KL ++ G +HP
Sbjct: 82 YIGGIKSITAKELLEKKPEELIKKAVKGMLPKNRLGRKLGKKLFVYTGDQHP 133
>gi|392586931|gb|EIW76266.1| 60S ribosomal protein L23 [Coniophora puteana RWD-64-598 SS2]
Length = 176
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSV---SYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV ++++ + DE V R+ G LKER KE ME P++ + AV MLP+N
Sbjct: 61 YVVVTNVKDIQVTGRKDEEIVYRRHTRFPGGLKERPYKEVMETKPSDVLYHAVSGMLPKN 120
Query: 62 KLRDDRDRKLRIFPGS 77
+L+D R +L++F GS
Sbjct: 121 RLKDRRLARLKVFGGS 136
>gi|164660286|ref|XP_001731266.1| hypothetical protein MGL_1449 [Malassezia globosa CBS 7966]
gi|159105166|gb|EDP44052.1| hypothetical protein MGL_1449 [Malassezia globosa CBS 7966]
Length = 154
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G LKE K M+ P + +R+AV MLP+NKLR+ R +L+IFP HP+
Sbjct: 92 YPGGLKEIPFKTMMQTKPEQILRRAVSGMLPKNKLRERRLERLKIFPNDVHPY 144
>gi|389576423|ref|ZP_10166451.1| ribosomal protein L13, bacterial type [Eubacterium cellulosolvens
6]
gi|389311908|gb|EIM56841.1| ribosomal protein L13, bacterial type [Eubacterium cellulosolvens
6]
Length = 142
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + YR Y+G LKE TLKE +E+ P AI AV MLP
Sbjct: 53 YVVVINAEKIKVTGKKLDQKIYYRHSDYVGSLKETTLKELLEKHPERAIEFAVKGMLPSG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L KL ++ G+EHP
Sbjct: 113 PLGRKMLTKLHVYAGAEHP 131
>gi|444433641|ref|ZP_21228779.1| 50S ribosomal protein L13 [Gordonia soli NBRC 108243]
gi|443885582|dbj|GAC70500.1| 50S ribosomal protein L13 [Gordonia soli NBRC 108243]
Length = 147
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S E ++YR+ GH L RT E +E P + KA++ MLP+N
Sbjct: 53 FVIIVNAEKVVLTSNKAERKLNYRHSGHPGGLTSRTTAELLETHPERVVEKAIIGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAIASKLKVYAGPNHP 131
>gi|444921524|ref|ZP_21241359.1| 50S ribosomal protein L13 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507251|gb|ELV07428.1| 50S ribosomal protein L13 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 142
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+GHLK+ +L++ +E +P + AV MLP+N L D RKL+IF G EH
Sbjct: 80 YVGHLKQTSLEKMLENNPERVLEFAVKGMLPKNVLGRDMFRKLKIFVGPEH 130
>gi|334336219|ref|YP_004541371.1| 50S ribosomal protein L13 [Isoptericola variabilis 225]
gi|334106587|gb|AEG43477.1| ribosomal protein L13 [Isoptericola variabilis 225]
Length = 149
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ E ++YR Y G L+ E +E++P A+ KAV MLP+N
Sbjct: 53 FVIVINADKVALSGNKRETKMAYRHSGYPGGLRSVAYGELLEKNPERAVEKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + +KL+++ G+EHP + +P+
Sbjct: 113 SLAAQQLKKLKVYRGAEHPHAAQQPKPF 140
>gi|435853008|ref|YP_007314327.1| ribosomal protein L13, bacterial type [Halobacteroides halobius DSM
5150]
gi|433669419|gb|AGB40234.1| ribosomal protein L13, bacterial type [Halobacteroides halobius DSM
5150]
Length = 143
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE E + P EAIRKAV MLP NKL +KL+++ G+EHP
Sbjct: 81 YPGGLKETAYDELLNDKPEEAIRKAVKGMLPSNKLGRKMLKKLKVYAGTEHP 132
>gi|317154430|ref|YP_004122478.1| 50S ribosomal protein L13 [Desulfovibrio aespoeensis Aspo-2]
gi|316944681|gb|ADU63732.1| ribosomal protein L13 [Desulfovibrio aespoeensis Aspo-2]
Length = 142
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LKE+TL+E +++ P I AV MLP+N+L +KL+++ GSEHP
Sbjct: 82 GGLKEKTLREMLDKKPENVITAAVKGMLPKNRLAAQLLKKLKVYAGSEHP 131
>gi|238061058|ref|ZP_04605767.1| 50S ribosomal protein L13 [Micromonospora sp. ATCC 39149]
gi|237882869|gb|EEP71697.1| 50S ribosomal protein L13 [Micromonospora sp. ATCC 39149]
Length = 147
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR Y G LK+ +E + + P AI AV MLP N
Sbjct: 53 FVVVVNAGKVALTGNKRQQKVAYRHSGYPGGLKQVGYEELLSKRPERAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G+EHP G + P+
Sbjct: 113 KLGRQLIKKLKVYAGAEHPHGAQQPAPF 140
>gi|256825852|ref|YP_003149812.1| 50S ribosomal protein L13P [Kytococcus sedentarius DSM 20547]
gi|256689245|gb|ACV07047.1| LSU ribosomal protein L13P [Kytococcus sedentarius DSM 20547]
Length = 149
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + +YR+ G L+ E +E+ PT A+ KAV MLP+N
Sbjct: 55 YVIIINAEKVALTGAKLAQKRAYRHSGFPGGLRSENYAEMLEKHPTRAVEKAVRGMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L + KL+++ G+EHP + +P+
Sbjct: 115 RLGRQQITKLKVYAGAEHPHAAQQPQPF 142
>gi|239616747|ref|YP_002940069.1| 50S ribosomal protein L13 [Kosmotoga olearia TBF 19.5.1]
gi|239505578|gb|ACR79065.1| ribosomal protein L13 [Kosmotoga olearia TBF 19.5.1]
Length = 174
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L + + YRY G+ LKERT +E +++ P I+ AV RMLP+
Sbjct: 83 FVIIINASKVKLTGKKLDQKIYYRYSGYPGGLKERTAREMLQKHPERVIKLAVKRMLPKT 142
Query: 62 KLRDDRDRKLRIFPGSEH 79
+L +KL+IF G EH
Sbjct: 143 RLGAKMLKKLKIFTGPEH 160
>gi|328769147|gb|EGF79191.1| hypothetical protein BATDEDRAFT_25748 [Batrachochytrium
dendrobatidis JAM81]
Length = 175
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 8 FFILRNLFILSLNDEMSVSYRYIGHLK----ERTLK--EQMERDPTEAIRKAVLRMLPRN 61
+ ++ N ++L + S Y+ H + LK + +ER PTE ++KAV M+P+
Sbjct: 51 YVVVINAKDVALTGKKSTQKEYMWHSGYPGGQTVLKFDKFIERHPTEPLKKAVWGMMPKG 110
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVMPP 93
LR ++ +L++F GS+HP+ ++ Y+ P
Sbjct: 111 NLRKEQIHRLKLFAGSDHPYASNIVKSYIPEP 142
>gi|452977623|gb|EME77389.1| hypothetical protein MYCFIDRAFT_158237 [Pseudocercospora fijiensis
CIRAD86]
Length = 170
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV NL E Y + G LKE T+++ M + E +R+AV MLP+
Sbjct: 56 YVVATNCHNLHTTGKKMEKKKYYSHTTRPGSLKEITMEKMMAKWGGGEILRRAVRGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD+R +L+ F G +HP+
Sbjct: 116 NRLRDERMARLKCFEGQQHPY 136
>gi|269217272|ref|ZP_06161126.1| ribosomal protein L13 [Slackia exigua ATCC 700122]
gi|402829115|ref|ZP_10877996.1| ribosomal protein L13 [Slackia sp. CM382]
gi|269129409|gb|EEZ60494.1| ribosomal protein L13 [Slackia exigua ATCC 700122]
gi|402284869|gb|EJU33362.1| ribosomal protein L13 [Slackia sp. CM382]
Length = 149
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH LK+ T +E ME+ P I AV MLP+N L KL+++ G+EHP
Sbjct: 79 YRHSGHPGGLKKETFQEAMEKHPERVIEHAVKGMLPKNTLGRAMGMKLKVYAGAEHP 135
>gi|328951880|ref|YP_004369214.1| 50S ribosomal protein L13 [Desulfobacca acetoxidans DSM 11109]
gi|328452204|gb|AEB08033.1| ribosomal protein L13 [Desulfobacca acetoxidans DSM 11109]
Length = 145
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 15 FILSLNDEMS----------VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N E + + YR YIG LK T + + PTE +R+AV MLP+N
Sbjct: 53 FVIVVNAEQALFTGKKLDKKIYYRHSGYIGGLKSTTARLMFQAKPTEVLRQAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+I+ G EHP
Sbjct: 113 SLGRRLLKKLKIYTGGEHP 131
>gi|255717773|ref|XP_002555167.1| mitochondrial 54S ribosomal protein YmL23 [Lachancea
thermotolerans]
gi|238936551|emb|CAR24730.1| KLTH0G02948p [Lachancea thermotolerans CBS 6340]
Length = 160
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQME-RDPTEAIRKAVLRMLPR 60
YVV + L + E + + GHLK T+++ E + E ++KAV MLP+
Sbjct: 56 YVVVTNCQQLRVTGKKFEQKTYWSHSQKPGHLKLTTMQKMAENKGYGEILKKAVSGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
NKLR R +L++F GSEHP+
Sbjct: 116 NKLRKPRLERLKVFDGSEHPY 136
>gi|381397909|ref|ZP_09923317.1| ribosomal protein L13 [Microbacterium laevaniformans OR221]
gi|380774575|gb|EIC07871.1| ribosomal protein L13 [Microbacterium laevaniformans OR221]
Length = 148
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLNDEM---SVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + ++YR Y G L + E +E++P A+ KA+ MLP+N
Sbjct: 54 FVIVVNAEKVALTGQKLQKKMAYRHSGYPGGLTATSYAELLEKNPVRAVEKAIRGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L + KL+++ G+EHP + PY
Sbjct: 114 SLGRQQLSKLKVYVGAEHPHAAQQPTPYTF 143
>gi|108804940|ref|YP_644877.1| 50S ribosomal protein L13 [Rubrobacter xylanophilus DSM 9941]
gi|108766183|gb|ABG05065.1| LSU ribosomal protein L13P [Rubrobacter xylanophilus DSM 9941]
Length = 167
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ER+ ++ + + P E +R+AV M+P+ +L + +KLRI+ G EHP + EP
Sbjct: 104 YPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHPHAGQTPEP 163
Query: 89 Y 89
Y
Sbjct: 164 Y 164
>gi|19551815|ref|NP_599817.1| 50S ribosomal protein L13 [Corynebacterium glutamicum ATCC 13032]
gi|62389470|ref|YP_224872.1| 50S ribosomal protein L13 [Corynebacterium glutamicum ATCC 13032]
gi|145294751|ref|YP_001137572.1| 50S ribosomal protein L13 [Corynebacterium glutamicum R]
gi|417969841|ref|ZP_12610777.1| 50S ribosomal protein L13 [Corynebacterium glutamicum S9114]
gi|418244765|ref|ZP_12871179.1| 50S ribosomal protein L13 [Corynebacterium glutamicum ATCC 14067]
gi|81761424|sp|Q8NST6.1|RL13_CORGL RecName: Full=50S ribosomal protein L13
gi|166230978|sp|A4QBS3.1|RL13_CORGB RecName: Full=50S ribosomal protein L13
gi|21323346|dbj|BAB97974.1| Ribosomal protein L13 [Corynebacterium glutamicum ATCC 13032]
gi|41324804|emb|CAF19286.1| RIBOSOMAL PROTEIN L13 [Corynebacterium glutamicum ATCC 13032]
gi|140844671|dbj|BAF53670.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045945|gb|EGV41614.1| 50S ribosomal protein L13 [Corynebacterium glutamicum S9114]
gi|354511274|gb|EHE84189.1| 50S ribosomal protein L13 [Corynebacterium glutamicum ATCC 14067]
gi|385142738|emb|CCH23777.1| 50S ribosomal protein L13 [Corynebacterium glutamicum K051]
Length = 147
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL ++ P I +++ M+P NKL +KL +F GSEHP+ + E
Sbjct: 80 YPGGLKSMTLGRSLDLHPERTIEDSIVGMMPHNKLTAASAKKLHVFSGSEHPYAAQKPEA 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|255324789|ref|ZP_05365903.1| ribosomal protein L13 [Corynebacterium tuberculostearicum SK141]
gi|255298264|gb|EET77567.1| ribosomal protein L13 [Corynebacterium tuberculostearicum SK141]
Length = 189
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I ++V M+P NKL +KL +F G EHP+ G +P
Sbjct: 122 YPGGLKSMTLGQSLDANPVRVIEESVAGMMPHNKLSRASIKKLHVFAGEEHPYAGQKP 179
>gi|311740020|ref|ZP_07713854.1| 50S ribosomal protein L13 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305093|gb|EFQ81162.1| 50S ribosomal protein L13 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 189
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I ++V M+P NKL +KL +F G EHP+ G +P
Sbjct: 122 YPGGLKSMTLGQSLDANPVRVIEESVAGMMPHNKLSRASIKKLHVFAGEEHPYAGQKP 179
>gi|426192629|gb|EKV42565.1| hypothetical protein AGABI2DRAFT_195869 [Agaricus bisporus var.
bisporus H97]
Length = 183
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
Y G LKE K+ M+R+ AIR+AV MLP+NKLRD R +L+IF G+
Sbjct: 81 YAGGLKETPYKDMMDRNHEHAIRQAVSGMLPKNKLRDRRLERLKIFRGTH 130
>gi|374584570|ref|ZP_09657662.1| LSU ribosomal protein L13P [Leptonema illini DSM 21528]
gi|373873431|gb|EHQ05425.1| LSU ribosomal protein L13P [Leptonema illini DSM 21528]
Length = 155
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
RY G L+E TL ++M+RDP A+ AV RMLP+ +L+I+ G+EHP +
Sbjct: 87 RYPGGLRETTLADKMDRDPAFALETAVKRMLPKGPRGRKMALQLKIYAGAEHPHQAQKPT 146
Query: 88 PYVM 91
P V+
Sbjct: 147 PVVL 150
>gi|227502710|ref|ZP_03932759.1| 50S ribosomal protein L13 [Corynebacterium accolens ATCC 49725]
gi|227076440|gb|EEI14403.1| 50S ribosomal protein L13 [Corynebacterium accolens ATCC 49725]
Length = 189
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I ++V M+P NKL +KL +F G EHP+ G +P
Sbjct: 122 YPGGLKSMTLGQSLDANPVRVIEESVAGMMPHNKLSRASIKKLHVFAGDEHPYAGQKP 179
>gi|94987001|ref|YP_594934.1| 50S ribosomal protein L13 [Lawsonia intracellularis PHE/MN1-00]
gi|442555835|ref|YP_007365660.1| 50S ribosomal protein L13 [Lawsonia intracellularis N343]
gi|118573410|sp|Q1MQW4.1|RL13_LAWIP RecName: Full=50S ribosomal protein L13
gi|94731250|emb|CAJ54613.1| ribosomal protein L13 [Lawsonia intracellularis PHE/MN1-00]
gi|441493282|gb|AGC49976.1| 50S ribosomal protein L13 [Lawsonia intracellularis N343]
Length = 144
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V + + E YR Y+G LKE TLK +E+ P E + AV MLP+N
Sbjct: 53 YIVVVNCEQIKVTGNKQEQKKYYRHSGYVGGLKETTLKTLLEKKPAEVLIHAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
+L +KL+++ G EH
Sbjct: 113 RLGRAMLKKLKVYAGPEH 130
>gi|239906174|ref|YP_002952913.1| 50S ribosomal protein L13 [Desulfovibrio magneticus RS-1]
gi|259645550|sp|C4XNQ2.1|RL13_DESMR RecName: Full=50S ribosomal protein L13
gi|239796038|dbj|BAH75027.1| 50S ribosomal protein L13 [Desulfovibrio magneticus RS-1]
Length = 142
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE +L++ + + P + IRKAV MLP+N+L +KL+I+ G HP
Sbjct: 80 WIGGLKETSLRDMLAKKPEDVIRKAVRGMLPKNRLGRAMLKKLKIYAGEAHP 131
>gi|433450202|ref|ZP_20412550.1| ribosomal protein L13 [Mycoplasma sp. G5847]
gi|431933902|gb|ELK20457.1| ribosomal protein L13 [Mycoplasma sp. G5847]
Length = 151
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R++ Q E DPT+ + +A+ MLP+N ++ R L +F GSEHPF
Sbjct: 83 GGLKKRSVSVQRELDPTKILERAIRLMLPKNVQGSNQYRALHVFKGSEHPFA 134
>gi|357416146|ref|YP_004929166.1| 50S ribosomal protein L13 [Pseudoxanthomonas spadix BD-a59]
gi|355333724|gb|AER55125.1| 50S ribosomal protein L13 [Pseudoxanthomonas spadix BD-a59]
Length = 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK TL++ +ER P I AV MLP+ L RKL+++ GS HP
Sbjct: 80 YIGNLKTETLQQALERHPERVIETAVKGMLPKGPLGRAMYRKLKVYAGSNHP 131
>gi|306835286|ref|ZP_07468315.1| 50S ribosomal protein L13 [Corynebacterium accolens ATCC 49726]
gi|304568830|gb|EFM44366.1| 50S ribosomal protein L13 [Corynebacterium accolens ATCC 49726]
Length = 189
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G LK TL + ++ +P I ++V M+P NKL +KL +F G EHP+ G +P
Sbjct: 122 YPGGLKSMTLGQSLDANPVRVIEESVAGMMPHNKLSRASIKKLHVFAGDEHPYAGQKP 179
>gi|410459898|ref|ZP_11313587.1| 50S ribosomal protein L13 [Bacillus azotoformans LMG 9581]
gi|409928009|gb|EKN65133.1| 50S ribosomal protein L13 [Bacillus azotoformans LMG 9581]
Length = 145
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 22 EMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
E V YR+ GH LK RT KE +E P + + A+ MLP+N L +KL ++ GSE
Sbjct: 71 ENKVYYRHSGHPGGLKSRTAKEMIETRPEQMLEGAIKGMLPKNTLGRQMFKKLNVYKGSE 130
Query: 79 HP 80
HP
Sbjct: 131 HP 132
>gi|404425288|ref|ZP_11006729.1| 50S ribosomal protein L13, partial [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403648558|gb|EJZ04148.1| 50S ribosomal protein L13, partial [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 127
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L ++ + S+ Y G L++RT+ E +++ PT + A++ MLP KL +KL+++ G
Sbjct: 49 LTNKFAYSHSGYPGGLRKRTIGELLQKHPTRVVENAIIGMLPHTKLGRQIQKKLKVYAGP 108
Query: 78 EHPFGDRPLEPY 89
+HP + PY
Sbjct: 109 DHPHAAQQPVPY 120
>gi|120402478|ref|YP_952307.1| 50S ribosomal protein L13 [Mycobacterium vanbaalenii PYR-1]
gi|166231001|sp|A1T551.1|RL13_MYCVP RecName: Full=50S ribosomal protein L13
gi|119955296|gb|ABM12301.1| LSU ribosomal protein L13P [Mycobacterium vanbaalenii PYR-1]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSL-NDEMS--VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L D+++ +YR Y G L++R++ E +++ PT + A++ MLP N
Sbjct: 53 FVIVINADKIALSGDKLNKKFAYRHSGYPGGLRKRSIGELLQKHPTRVVENAIVGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G EHP
Sbjct: 113 KLSRQVQKKLKVYAGPEHP 131
>gi|326333149|ref|ZP_08199397.1| ribosomal protein L13 [Nocardioidaceae bacterium Broad-1]
gi|325949040|gb|EGD41132.1| ribosomal protein L13 [Nocardioidaceae bacterium Broad-1]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +SL+ ++YR Y G L + E +++D +AI KAV MLP+N
Sbjct: 53 FVIVINAEKVSLSGNKKTTKLAYRHSGYPGGLTATPIGEVLDKDARKAIEKAVWGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G EHP + P+
Sbjct: 113 KLGRQMLKKLKVYSGPEHPHAAQQAVPF 140
>gi|118573441|sp|Q1AU63.2|RL13_RUBXD RecName: Full=50S ribosomal protein L13
Length = 143
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ER+ ++ + + P E +R+AV M+P+ +L + +KLRI+ G EHP + EP
Sbjct: 80 YPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHPHAGQTPEP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|148263122|ref|YP_001229828.1| 50S ribosomal protein L13 [Geobacter uraniireducens Rf4]
gi|146396622|gb|ABQ25255.1| LSU ribosomal protein L13P [Geobacter uraniireducens Rf4]
Length = 143
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRYIGH------LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L S Y H LKE + + ME+ P + I+KAV MLP+N
Sbjct: 54 FVIVVNAEKIALTGNKSADKIYYSHSGFPGGLKEISAGKLMEKKPEDIIKKAVKGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+I+ G++HP
Sbjct: 114 KLARHMLKKLKIYSGTDHP 132
>gi|410463495|ref|ZP_11317008.1| ribosomal protein L13, bacterial type [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409983405|gb|EKO39781.1| ribosomal protein L13, bacterial type [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE +L++ + + P + IRKAV MLP+N+L +KL+I+ G HP
Sbjct: 80 WIGGLKETSLRDMLAKKPEDVIRKAVRGMLPKNRLGRAMLKKLKIYAGEAHP 131
>gi|152964689|ref|YP_001360473.1| 50S ribosomal protein L13 [Kineococcus radiotolerans SRS30216]
gi|189041007|sp|A6W5X0.1|RL13_KINRD RecName: Full=50S ribosomal protein L13
gi|151359206|gb|ABS02209.1| ribosomal protein L13 [Kineococcus radiotolerans SRS30216]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + V+YR Y G LK + + +E++P +A+ KA+ M+P+N
Sbjct: 53 YVIIVNAAKVALTGSKRDQKVAYRHSGYPGGLKATSYVDLLEQNPEKAVEKAIRGMIPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L KL+++ G+EHP + E Y +
Sbjct: 113 SLGRQVLSKLKVYAGAEHPHAAQQPEAYTI 142
>gi|424789551|ref|ZP_18216199.1| 50S ribosomal protein L13 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433677299|ref|ZP_20509300.1| 50S ribosomal protein L13 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440732176|ref|ZP_20912137.1| 50S ribosomal protein L13 [Xanthomonas translucens DAR61454]
gi|422798508|gb|EKU26594.1| 50S ribosomal protein L13 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430817613|emb|CCP39683.1| 50S ribosomal protein L13 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440370185|gb|ELQ07127.1| 50S ribosomal protein L13 [Xanthomonas translucens DAR61454]
Length = 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK TL + +ER P I AV MLP+ L RKL+++ GSEHP
Sbjct: 80 YIGNLKTETLAQALERHPERVIEIAVKGMLPKGPLGRAMYRKLKVYKGSEHP 131
>gi|452909962|ref|ZP_21958645.1| LSU ribosomal protein L13p (L13Ae) [Kocuria palustris PEL]
gi|452834922|gb|EME37720.1| LSU ribosomal protein L13p (L13Ae) [Kocuria palustris PEL]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + ++YR+ H L T E + + P A+ KA+ MLP+N
Sbjct: 53 FVIVVNADKVALTGDKLQKKIAYRHSNHPGGLTATTYAELLAKSPERAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFG 82
KL + KL+++ G EHP G
Sbjct: 113 KLAAQQLSKLKVYAGPEHPHG 133
>gi|188997629|ref|YP_001931880.1| 50S ribosomal protein L13 [Sulfurihydrogenibium sp. YO3AOP1]
gi|226705042|sp|B2V795.1|RL13_SULSY RecName: Full=50S ribosomal protein L13
gi|188932696|gb|ACD67326.1| ribosomal protein L13 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 150
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
G LK R L+ +E PTEA+ AV RMLP+NKL+ ++L+++ G HP + L+P
Sbjct: 82 GGLKVRNLQWMIEHKPTEALALAVERMLPKNKLQKRYMKRLKLYAGETHPHTAQNLKP 139
>gi|406997715|gb|EKE15737.1| hypothetical protein ACD_11C00108G0031 [uncultured bacterium]
Length = 128
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G + +LK+ ++ DPT+ I+ A+ MLP+NKLRD ++L + GSEH +
Sbjct: 70 YPGGITAVSLKDLLKNDPTKVIKNALYGMLPKNKLRDVMMKRLHVVVGSEHQY 122
>gi|118616639|ref|YP_904971.1| 50S ribosomal protein L13 [Mycobacterium ulcerans Agy99]
gi|166231000|sp|A0PMD1.1|RL13_MYCUA RecName: Full=50S ribosomal protein L13
gi|118568749|gb|ABL03500.1| 50S ribosomal protein L13, RplM [Mycobacterium ulcerans Agy99]
Length = 147
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L++R++ E ME+ P + KA++ MLP+NKL KLR++ G HP
Sbjct: 80 YPGGLRKRSIGELMEKHPDRVVEKAIVGMLPKNKLSRQIQSKLRVYAGPGHP 131
>gi|218780534|ref|YP_002431852.1| 50S ribosomal protein L13 [Desulfatibacillum alkenivorans AK-01]
gi|218761918|gb|ACL04384.1| ribosomal protein L13 [Desulfatibacillum alkenivorans AK-01]
Length = 147
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG LKE T + +E+ P + IR AV MLP+N+L ++KLR++ G +HP + EP
Sbjct: 84 YIGGLKEITAAKLLEKRPEDLIRFAVKGMLPKNRLGRQLNKKLRVYAGPDHPHEAQQPEP 143
>gi|374286966|ref|YP_005034051.1| 50S ribosomal protein L13 [Bacteriovorax marinus SJ]
gi|301165507|emb|CBW25078.1| 50S ribosomal protein L13 [Bacteriovorax marinus SJ]
Length = 146
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
+IG LK RT KEQ+ER P + + AV MLP+N L + KL++F G H
Sbjct: 83 HIGGLKSRTAKEQLERKPEQILMNAVKGMLPKNSLGRKQLTKLKVFAGETH 133
>gi|297170233|gb|ADI21271.1| hypothetical protein [uncultured myxobacterium HF0010_08B07]
Length = 141
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRML 58
+ +V+ RN+ + + YR+ G +K+ + ++QME++P + IR AV ML
Sbjct: 50 VGDFVILLNARNIEVTGKKATDKIYYRHSGFPGGIKQISFQDQMEKNPEKVIRDAVKGML 109
Query: 59 PRNKLRDDRDRKLRIFPGSEHP 80
P+NKL KL+++ S HP
Sbjct: 110 PKNKLNRKIINKLKVYNDSNHP 131
>gi|397640918|gb|EJK74386.1| hypothetical protein THAOC_03939 [Thalassiosira oceanica]
Length = 197
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 7 VFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
V I + LS N YR Y G LKER ++ +ER PTE ++KA+L ML RN
Sbjct: 64 VVIINADKVHLSGNKWKDKMYRWHTGYPGGLKERPARDMLERKPTEILKKAILGMLNRNN 123
Query: 63 LRDDR-DRKLRIFPGSEH------PFGDRPLEPYVMPPRRVRELRPRVRRAMIREQKKAE 115
LR + +L IF G +H P G PL + PR RR +
Sbjct: 124 LRTSYMEPRLHIFAGPKHHHEAQLPKGTEPL-----------PVHPRQRRGTFHYGMGPQ 172
Query: 116 MQQSNKDMRKNRK 128
+ SN ++ K
Sbjct: 173 YKYSNTTFQQGGK 185
>gi|359424532|ref|ZP_09215645.1| 50S ribosomal protein L13 [Gordonia amarae NBRC 15530]
gi|358240132|dbj|GAB05227.1| 50S ribosomal protein L13 [Gordonia amarae NBRC 15530]
Length = 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMS---VSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + + ++YR+ GH L RT E + P + KAV MLP+N
Sbjct: 53 FVIIINAEKVALTNNKADSKLNYRHSGHPGGLTVRTTAELLASHPERVVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL D KL+++ G HP
Sbjct: 113 KLSDAIASKLKVYAGPNHP 131
>gi|400535971|ref|ZP_10799507.1| 50S ribosomal protein L13 [Mycobacterium colombiense CECT 3035]
gi|400331014|gb|EJO88511.1| 50S ribosomal protein L13 [Mycobacterium colombiense CECT 3035]
Length = 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
++YR Y G L RT++E M++ P + A++ MLP+NKL RKL ++ G HP
Sbjct: 73 LAYRHSGYPGGLSSRTIRELMDKHPDRVVEDAIVGMLPKNKLARQIARKLHVYAGPTHPH 132
Query: 82 GDRPLEPY 89
+ PY
Sbjct: 133 AAQQPVPY 140
>gi|322711337|gb|EFZ02911.1| ribosomal protein L13 [Metarhizium anisopliae ARSEF 23]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 27 YRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
YR+ G LKE T+ ME+ E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 116 YRHTTRPGSLKELTMDALMEKHGGGEVLRKAVRGMLPKNRLRDKRLARLKAFEGDAHPYK 175
Query: 83 D 83
D
Sbjct: 176 D 176
>gi|223998086|ref|XP_002288716.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975824|gb|EED94152.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDR-DRKLRIFPGSEHP 80
Y G LKER K+ +ER P +RKA+L ML RN LR+ + +L+I+ GSEHP
Sbjct: 77 YPGGLKERPAKDMLERKPEFILRKAILGMLYRNNLRESYMEPRLKIYAGSEHP 129
>gi|271962671|ref|YP_003336867.1| 50S ribosomal protein L13 [Streptosporangium roseum DSM 43021]
gi|270505846|gb|ACZ84124.1| 50S ribosomal protein L13 [Streptosporangium roseum DSM 43021]
Length = 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L+ T E ME+ P A+ KAV MLP+N
Sbjct: 53 FVIIINADKVALTGNKLEQKKAYRHSGYPGGLRSVTYGELMEKRPDRAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ GSEHP
Sbjct: 113 ALGRKMIKKLKVYAGSEHP 131
>gi|374340620|ref|YP_005097356.1| 50S ribosomal protein L13 [Marinitoga piezophila KA3]
gi|372102154|gb|AEX86058.1| ribosomal protein L13, bacterial type [Marinitoga piezophila KA3]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE+T KE +E+ P I KAV MLP+ KL +KL+++ GS HP
Sbjct: 86 YPGGLKEQTAKEILEKYPERLIEKAVKGMLPKTKLGRHMYKKLKVYAGSNHP 137
>gi|322700634|gb|EFY92388.1| 50S ribosomal protein L13 [Metarhizium acridum CQMa 102]
Length = 160
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 27 YRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
YR+ G LKE T+ ME+ +E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 70 YRHTTRPGSLKELTMDALMEKHGGSEVLRKAVRGMLPKNRLRDKRLARLKAFEGDAHPYK 129
Query: 83 D 83
D
Sbjct: 130 D 130
>gi|213964856|ref|ZP_03393055.1| ribosomal protein L13 [Corynebacterium amycolatum SK46]
gi|213952392|gb|EEB63775.1| ribosomal protein L13 [Corynebacterium amycolatum SK46]
Length = 147
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G LK TL +E P I +A+ M+P NKL +KL +F GSEHPF + E Y
Sbjct: 82 GGLKSMTLGRSLEVHPERVIAEAIEGMMPHNKLSRASIKKLHVFAGSEHPFAGQKPENY 140
>gi|269468402|gb|EEZ80067.1| ribosomal protein L13 [uncultured SUP05 cluster bacterium]
Length = 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
Y+G+LK K+ + P E I KAV MLP+ L D RK+++F GSEH G
Sbjct: 80 YVGNLKSIAFKDLQAKKPEEIINKAVKGMLPKGPLGRDMFRKMKVFAGSEHTHG 133
>gi|405981300|ref|ZP_11039627.1| ribosomal protein L13 [Actinomyces neuii BVS029A5]
gi|404392224|gb|EJZ87284.1| ribosomal protein L13 [Actinomyces neuii BVS029A5]
Length = 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L+ T +E +E+ P +A+ KAV M+P KL + +KLR+F GSEHP
Sbjct: 81 YPGGLRSLTYRELLEKSPEKAVEKAVRGMVPHTKLGRAQMKKLRVFVGSEHP 132
>gi|403669774|ref|ZP_10934950.1| 50S ribosomal protein L13 [Kurthia sp. JC8E]
Length = 145
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
+Y G LK+RT E E+ P + + AV MLP+N L KL ++ G+EHP + E
Sbjct: 80 QYSGGLKQRTAGEMKEKYPVQMLELAVKGMLPKNSLGRQTFTKLHVYAGAEHPHAAQQPE 139
Query: 88 PYVM 91
Y +
Sbjct: 140 TYTL 143
>gi|194367483|ref|YP_002030093.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia R551-3]
gi|226705040|sp|B4SLE1.1|RL13_STRM5 RecName: Full=50S ribosomal protein L13
gi|194350287|gb|ACF53410.1| ribosomal protein L13 [Stenotrophomonas maltophilia R551-3]
Length = 142
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L + +ER P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLAQALERHPERVIETAVKGMLPKGPLGRQMYRKLKVYAGTEHP 131
>gi|357039716|ref|ZP_09101508.1| ribosomal protein L13 [Desulfotomaculum gibsoniae DSM 7213]
gi|355357522|gb|EHG05295.1| ribosomal protein L13 [Desulfotomaculum gibsoniae DSM 7213]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + ++ M+ P A+ KA+ MLP N L D RKLR++ GSEHP
Sbjct: 81 YPGGLKATSYEKLMQSKPELAVYKAITGMLPHNSLGRDMARKLRVYRGSEHP 132
>gi|226365639|ref|YP_002783422.1| 50S ribosomal protein L13 [Rhodococcus opacus B4]
gi|254798511|sp|C1B056.1|RL13_RHOOB RecName: Full=50S ribosomal protein L13
gi|226244129|dbj|BAH54477.1| 50S ribosomal protein L13 [Rhodococcus opacus B4]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S Y + GH LK R++ E ++++P + KAV+ MLP+N
Sbjct: 53 FVVIINADKVAISGNKREGKFLYHHSGHPGGLKSRSVGEVLDKNPDRLVEKAVVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G HP + P+
Sbjct: 113 KLGRAISSKLKVYAGPNHPHAAQQPVPF 140
>gi|289424951|ref|ZP_06426730.1| ribosomal protein L13 [Propionibacterium acnes SK187]
gi|289427685|ref|ZP_06429397.1| ribosomal protein L13 [Propionibacterium acnes J165]
gi|295131331|ref|YP_003581994.1| 50S ribosomal protein L13 [Propionibacterium acnes SK137]
gi|335052699|ref|ZP_08545574.1| ribosomal protein L13 [Propionibacterium sp. 409-HC1]
gi|342211387|ref|ZP_08704112.1| ribosomal protein L13 [Propionibacterium sp. CC003-HC2]
gi|354607524|ref|ZP_09025493.1| 50S ribosomal protein L13 [Propionibacterium sp. 5_U_42AFAA]
gi|365963453|ref|YP_004945019.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965696|ref|YP_004947261.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974631|ref|YP_004956190.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn33]
gi|407936189|ref|YP_006851831.1| 50S ribosomal protein L13 [Propionibacterium acnes C1]
gi|417929921|ref|ZP_12573301.1| ribosomal protein L13 [Propionibacterium acnes SK182]
gi|289154650|gb|EFD03336.1| ribosomal protein L13 [Propionibacterium acnes SK187]
gi|289159176|gb|EFD07368.1| ribosomal protein L13 [Propionibacterium acnes J165]
gi|291375212|gb|ADD99066.1| ribosomal protein L13 [Propionibacterium acnes SK137]
gi|333762926|gb|EGL40405.1| ribosomal protein L13 [Propionibacterium sp. 409-HC1]
gi|340766931|gb|EGR89456.1| ribosomal protein L13 [Propionibacterium sp. CC003-HC2]
gi|340772608|gb|EGR95109.1| ribosomal protein L13 [Propionibacterium acnes SK182]
gi|353556543|gb|EHC25913.1| 50S ribosomal protein L13 [Propionibacterium sp. 5_U_42AFAA]
gi|365740134|gb|AEW84336.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742377|gb|AEW82071.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744630|gb|AEW79827.1| 50S ribosomal protein L13 [Propionibacterium acnes TypeIA2 P.acn33]
gi|407904770|gb|AFU41600.1| 50S ribosomal protein L13 [Propionibacterium acnes C1]
gi|456738894|gb|EMF63461.1| 50S ribosomal protein L13 [Propionibacterium acnes FZ1/2/0]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 53 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|429859677|gb|ELA34448.1| 50s ribosomal protein l13 [Colletotrichum gloeosporioides Nara gc5]
Length = 239
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L + YR+ G L++ T+ ME+ E +RKAV MLP+
Sbjct: 127 YVVVTDCAALHVTGRKKWQKTYYRHNTRPGSLRQVTMDVLMEKHGGAEVLRKAVSGMLPK 186
Query: 61 NKLRDDRDRKLRIFPGSEHP-------FGDRPL 86
N+LRD R +L+ F G+ HP FGD P+
Sbjct: 187 NRLRDKRLARLKAFEGAAHPYKQNVIRFGDVPV 219
>gi|384082089|ref|ZP_09993264.1| 50S ribosomal protein L13 [gamma proteobacterium HIMB30]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH LKE + +ER P + I AV MLPRN L RKL+++ G EHP
Sbjct: 75 YRHTGHPGGLKEANFTQMIERSPEKVIELAVKGMLPRNPLGRAMYRKLKVYAGQEHP 131
>gi|163781711|ref|ZP_02176711.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882931|gb|EDP76435.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1]
Length = 144
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LKERTL + P E I AV RMLP+N+L +KL+++ G EHP + EP
Sbjct: 80 YPGGLKERTLGWMLANKPEEVITLAVKRMLPKNRLGHRMLKKLKVYRGPEHPHISQKPEP 139
>gi|25027142|ref|NP_737196.1| 50S ribosomal protein L13 [Corynebacterium efficiens YS-314]
gi|259506723|ref|ZP_05749625.1| 50S ribosomal protein L13 [Corynebacterium efficiens YS-314]
gi|81750149|sp|Q8FS20.1|RL13_COREF RecName: Full=50S ribosomal protein L13
gi|23492423|dbj|BAC17396.1| putative 50S ribosomal protein L13 [Corynebacterium efficiens
YS-314]
gi|259165706|gb|EEW50260.1| 50S ribosomal protein L13 [Corynebacterium efficiens YS-314]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E P + +++ M+P NKL +KL +F GSEHP+ + E
Sbjct: 80 YPGGLKSMTLGRSLELHPERVLEESITGMMPHNKLTAASVKKLHVFAGSEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|335054880|ref|ZP_08547678.1| ribosomal protein L13 [Propionibacterium sp. 434-HC2]
gi|387504173|ref|YP_005945402.1| 50S ribosomal protein L13 [Propionibacterium acnes 6609]
gi|419419704|ref|ZP_13959937.1| 50S ribosomal protein L13 [Propionibacterium acnes PRP-38]
gi|333763405|gb|EGL40857.1| ribosomal protein L13 [Propionibacterium sp. 434-HC2]
gi|335278218|gb|AEH30123.1| 50S ribosomal protein L13 [Propionibacterium acnes 6609]
gi|379979425|gb|EIA12745.1| 50S ribosomal protein L13 [Propionibacterium acnes PRP-38]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 53 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|452954036|gb|EME59441.1| 50S ribosomal protein L13 [Rhodococcus ruber BKS 20-38]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L+ RT+ E +E++P + KAV MLP+NKL +KL+++ G HP
Sbjct: 80 YPGGLRSRTVGEVLEKNPDRLVEKAVTGMLPKNKLGRAIAKKLKVYAGPNHP 131
>gi|429732164|ref|ZP_19266784.1| ribosomal protein L13 [Corynebacterium durum F0235]
gi|429144399|gb|EKX87518.1| ribosomal protein L13 [Corynebacterium durum F0235]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E P + +A+ M+P NKL +KLR+F G EHP+ + E
Sbjct: 80 YPGGLKALTLGRSLELHPERVVEEAIKGMMPHNKLSRASAKKLRVFAGPEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|50843261|ref|YP_056488.1| 50S ribosomal protein L13 [Propionibacterium acnes KPA171202]
gi|81692397|sp|Q6A6T3.1|RL13_PROAC RecName: Full=50S ribosomal protein L13
gi|50840863|gb|AAT83530.1| 50S ribosomal protein L13 [Propionibacterium acnes KPA171202]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 53 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|42522099|ref|NP_967479.1| 50S ribosomal protein L13 [Bdellovibrio bacteriovorus HD100]
gi|81697912|sp|Q6MQH5.1|RL13_BDEBA RecName: Full=50S ribosomal protein L13
gi|39574630|emb|CAE78472.1| 50S ribosomal protein L13 [Bdellovibrio bacteriovorus HD100]
Length = 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
R+ G LKE T + E+D T I +AV MLP NKL K++ + G+EHP +
Sbjct: 79 RFFGSLKEMTAAQAKEKDSTFIIHEAVRGMLPTNKLSRHVIMKMKAYTGAEHPHAAQKPA 138
Query: 88 PYVMPPRR 95
+ +P ++
Sbjct: 139 LFTLPSKK 146
>gi|365984395|ref|XP_003669030.1| hypothetical protein NDAI_0C01260 [Naumovozyma dairenensis CBS 421]
gi|343767798|emb|CCD23787.1| hypothetical protein NDAI_0C01260 [Naumovozyma dairenensis CBS 421]
Length = 170
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQM-ERDPTEAIRKAVLRMLPR 60
YVV + L + E + + G LK +T++ + + E +RKAV MLP+
Sbjct: 56 YVVVTNCQKLRVTGKKMEQKTYWSHTSRPGSLKLKTMETIVANKGYGEVLRKAVSGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPFGDRPLE-PYVMPP 93
NKLR R +L++F GSEHP+ + L Y PP
Sbjct: 116 NKLRKPRLERLKVFDGSEHPYTNNILAFAYEQPP 149
>gi|350422209|ref|XP_003493091.1| PREDICTED: 50S ribosomal protein L13-like [Bombus impatiens]
Length = 141
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V + + V YRY IG LKE T E +ER P I AV MLP+
Sbjct: 52 YIVVINAEKVAVTGKKRTDKVYYRYSGYIGGLKEATFNEMIERHPERVIEIAVKGMLPKG 111
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GSEH
Sbjct: 112 PLGRAMYRKLKVYAGSEH 129
>gi|330470108|ref|YP_004407851.1| 50S ribosomal protein L13 [Verrucosispora maris AB-18-032]
gi|328813079|gb|AEB47251.1| 50S ribosomal protein L13 [Verrucosispora maris AB-18-032]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + ++YR Y G LK+ +E + + P AI AV MLP N
Sbjct: 53 FVVVVNAGKVALTGNKRQQKIAYRHSGYPGGLKQVGYEELLSKRPERAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G+EHP G + P+
Sbjct: 113 KLGRQLIKKLKVYAGAEHPHGAQQPVPF 140
>gi|383315622|ref|YP_005376464.1| 50S ribosomal protein L13 [Frateuria aurantia DSM 6220]
gi|379042726|gb|AFC84782.1| ribosomal protein L13, bacterial type [Frateuria aurantia DSM 6220]
Length = 142
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK L++ + + P +AI AV MLP+N L RKL+++ GSEHP
Sbjct: 80 YVGNLKTTNLRDLLAKHPEQAIEIAVKGMLPKNPLGRAMYRKLKVYGGSEHP 131
>gi|393198979|ref|YP_006460821.1| 50S ribosomal protein L13 [Solibacillus silvestris StLB046]
gi|406666890|ref|ZP_11074653.1| 50S ribosomal protein L13 [Bacillus isronensis B3W22]
gi|327438310|dbj|BAK14675.1| ribosomal protein L13 [Solibacillus silvestris StLB046]
gi|405385173|gb|EKB44609.1| 50S ribosomal protein L13 [Bacillus isronensis B3W22]
Length = 145
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
++ G LK+RT E E+ PT+ + A+ MLP+N L KL ++ GSEHP + E
Sbjct: 80 QFAGGLKQRTAGEMKEKYPTQMLELAIKGMLPKNSLGRQMFSKLNVYTGSEHPHAAQKPE 139
Query: 88 PY 89
Y
Sbjct: 140 AY 141
>gi|407278696|ref|ZP_11107166.1| 50S ribosomal protein L13 [Rhodococcus sp. P14]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L+ RT+ E +E++P + KAV MLP+NKL +KL+++ G HP
Sbjct: 80 YPGGLRSRTVGEVLEKNPDRLVEKAVTGMLPKNKLGRAIAKKLKVYAGPNHP 131
>gi|83319647|ref|YP_424627.1| 50S ribosomal protein L13 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|123535565|sp|Q2SRI6.1|RL13_MYCCT RecName: Full=50S ribosomal protein L13
gi|83283533|gb|ABC01465.1| 50S ribosomal protein L13 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 151
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R++ Q E DPT+ + +A+ MLP+N ++ R L +F GSEHP+
Sbjct: 83 GGLKKRSVSVQRELDPTKILERAIRLMLPKNVQGSNQYRALHVFKGSEHPYA 134
>gi|312140874|ref|YP_004008210.1| 50S ribosomal protein l13 rplm [Rhodococcus equi 103S]
gi|325675488|ref|ZP_08155172.1| 50S ribosomal protein L13 [Rhodococcus equi ATCC 33707]
gi|311890213|emb|CBH49531.1| 50S ribosomal protein L13 RplM [Rhodococcus equi 103S]
gi|325553459|gb|EGD23137.1| 50S ribosomal protein L13 [Rhodococcus equi ATCC 33707]
Length = 137
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S Y + GH LK R++ E +E++P + KAV MLP+N
Sbjct: 43 FVVIINADKVAISGNKRTDKFLYHHSGHPGGLKSRSVGEVLEKNPDRLVEKAVTGMLPKN 102
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G HP + P+
Sbjct: 103 KLGRAIAGKLKVYAGPTHPHAAQQPVPF 130
>gi|167515562|ref|XP_001742122.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778746|gb|EDQ92360.1| predicted protein [Monosiga brevicollis MX1]
Length = 143
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG---DRP 85
+ G +ERT ++ R PTE +RKAV MLP+NKLR +L + G +HP+G D
Sbjct: 81 WPGGFRERTARDMHARKPTEVLRKAVNGMLPKNKLRRRMMDQLFLIEGDKHPYGMNVDEV 140
Query: 86 LEP 88
L+P
Sbjct: 141 LQP 143
>gi|119715134|ref|YP_922099.1| 50S ribosomal protein L13 [Nocardioides sp. JS614]
gi|166231004|sp|A1SF27.1|RL13_NOCSJ RecName: Full=50S ribosomal protein L13
gi|119535795|gb|ABL80412.1| LSU ribosomal protein L13P [Nocardioides sp. JS614]
Length = 147
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSVS---YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ + + + YR Y G L + E +E+D +AI KAV MLP+N
Sbjct: 53 FVIIVNAEKVALSGDKATTKMAYRHSGYPGGLTATPIGEILEKDARKAIEKAVWGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G HP + P+
Sbjct: 113 KLGRQMLKKLKVYSGPNHPHQAQKATPF 140
>gi|375098854|ref|ZP_09745117.1| ribosomal protein L13, bacterial type [Saccharomonospora cyanea
NA-134]
gi|374659586|gb|EHR59464.1| ribosomal protein L13, bacterial type [Saccharomonospora cyanea
NA-134]
Length = 150
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++R+ E +E P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKREQKFAYRHSGYPGGLRKRSFGELLETRPERLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPEHPHAAQKPQPH 140
>gi|315054615|ref|XP_003176682.1| mitochondrial 54S ribosomal protein YmL23 [Arthroderma gypseum CBS
118893]
gi|311338528|gb|EFQ97730.1| 54S ribosomal protein L23 [Arthroderma gypseum CBS 118893]
Length = 170
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV RNL + Y + G LK ++++ +E+ E +RKAV MLP+
Sbjct: 56 YVVALGCRNLHTTGKKRAQKLYYTHNTRPGSLKSMSMEQMIEKWGGAEVLRKAVKGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR+ R +L+ F G EHP+
Sbjct: 116 NRLREKRMARLKAFEGLEHPY 136
>gi|404442388|ref|ZP_11007567.1| 50S ribosomal protein L13 [Mycobacterium vaccae ATCC 25954]
gi|403656960|gb|EJZ11750.1| 50S ribosomal protein L13 [Mycobacterium vaccae ATCC 25954]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D+++VS YR Y G L++R++ E +++ PT + A+ MLP N
Sbjct: 53 FVIVINADKIAVSGDKLTKKFAYRHSGYPGGLRKRSIGELLQKHPTRVVENAITGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G +HP
Sbjct: 113 KLGRQIQKKLKVYAGPDHP 131
>gi|379058320|ref|ZP_09848846.1| 50S ribosomal protein L13 [Serinicoccus profundi MCCC 1A05965]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L+ + ++ +E+ PT A+ KAV MLP+N
Sbjct: 53 FVIIINADKVALTGSKLEQKKAYRHSGYPGGLRADSYEQLLEKHPTRAVEKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L KL+++ G HP + PYV+
Sbjct: 113 SLGRQMLSKLKVYAGETHPHAAQQPVPYVI 142
>gi|386024745|ref|YP_005943050.1| 50S ribosomal protein L13 [Propionibacterium acnes 266]
gi|422386320|ref|ZP_16466440.1| ribosomal protein L13 [Propionibacterium acnes HL096PA3]
gi|422388855|ref|ZP_16468955.1| ribosomal protein L13 [Propionibacterium acnes HL096PA2]
gi|422392464|ref|ZP_16472533.1| ribosomal protein L13 [Propionibacterium acnes HL099PA1]
gi|422425761|ref|ZP_16502691.1| ribosomal protein L13 [Propionibacterium acnes HL043PA1]
gi|422428688|ref|ZP_16505598.1| ribosomal protein L13 [Propionibacterium acnes HL087PA1]
gi|422429661|ref|ZP_16506557.1| ribosomal protein L13 [Propionibacterium acnes HL072PA2]
gi|422433855|ref|ZP_16510719.1| ribosomal protein L13 [Propionibacterium acnes HL059PA2]
gi|422436456|ref|ZP_16513305.1| ribosomal protein L13 [Propionibacterium acnes HL083PA2]
gi|422438925|ref|ZP_16515762.1| ribosomal protein L13 [Propionibacterium acnes HL092PA1]
gi|422443962|ref|ZP_16520759.1| ribosomal protein L13 [Propionibacterium acnes HL002PA1]
gi|422444585|ref|ZP_16521369.1| ribosomal protein L13 [Propionibacterium acnes HL027PA1]
gi|422448466|ref|ZP_16525193.1| ribosomal protein L13 [Propionibacterium acnes HL036PA3]
gi|422451134|ref|ZP_16527838.1| ribosomal protein L13 [Propionibacterium acnes HL030PA2]
gi|422454001|ref|ZP_16530682.1| ribosomal protein L13 [Propionibacterium acnes HL087PA3]
gi|422461263|ref|ZP_16537893.1| ribosomal protein L13 [Propionibacterium acnes HL038PA1]
gi|422475930|ref|ZP_16552374.1| ribosomal protein L13 [Propionibacterium acnes HL056PA1]
gi|422478452|ref|ZP_16554873.1| ribosomal protein L13 [Propionibacterium acnes HL007PA1]
gi|422483634|ref|ZP_16560022.1| ribosomal protein L13 [Propionibacterium acnes HL036PA1]
gi|422484372|ref|ZP_16560750.1| ribosomal protein L13 [Propionibacterium acnes HL043PA2]
gi|422490124|ref|ZP_16566445.1| ribosomal protein L13 [Propionibacterium acnes HL020PA1]
gi|422493902|ref|ZP_16570199.1| ribosomal protein L13 [Propionibacterium acnes HL086PA1]
gi|422496500|ref|ZP_16572784.1| ribosomal protein L13 [Propionibacterium acnes HL025PA1]
gi|422497243|ref|ZP_16573518.1| ribosomal protein L13 [Propionibacterium acnes HL002PA3]
gi|422500646|ref|ZP_16576901.1| ribosomal protein L13 [Propionibacterium acnes HL063PA2]
gi|422503535|ref|ZP_16579773.1| ribosomal protein L13 [Propionibacterium acnes HL027PA2]
gi|422505753|ref|ZP_16581982.1| ribosomal protein L13 [Propionibacterium acnes HL036PA2]
gi|422508732|ref|ZP_16584891.1| ribosomal protein L13 [Propionibacterium acnes HL046PA2]
gi|422510154|ref|ZP_16586302.1| ribosomal protein L13 [Propionibacterium acnes HL059PA1]
gi|422512142|ref|ZP_16588277.1| ribosomal protein L13 [Propionibacterium acnes HL087PA2]
gi|422517081|ref|ZP_16593186.1| ribosomal protein L13 [Propionibacterium acnes HL110PA2]
gi|422517676|ref|ZP_16593767.1| ribosomal protein L13 [Propionibacterium acnes HL074PA1]
gi|422522346|ref|ZP_16598372.1| ribosomal protein L13 [Propionibacterium acnes HL045PA1]
gi|422525003|ref|ZP_16601011.1| ribosomal protein L13 [Propionibacterium acnes HL053PA2]
gi|422526835|ref|ZP_16602828.1| ribosomal protein L13 [Propionibacterium acnes HL083PA1]
gi|422530037|ref|ZP_16606002.1| ribosomal protein L13 [Propionibacterium acnes HL053PA1]
gi|422531089|ref|ZP_16607038.1| ribosomal protein L13 [Propionibacterium acnes HL110PA1]
gi|422533000|ref|ZP_16608942.1| ribosomal protein L13 [Propionibacterium acnes HL072PA1]
gi|422538059|ref|ZP_16613938.1| ribosomal protein L13 [Propionibacterium acnes HL078PA1]
gi|422540644|ref|ZP_16616509.1| ribosomal protein L13 [Propionibacterium acnes HL013PA1]
gi|422540821|ref|ZP_16616683.1| ribosomal protein L13 [Propionibacterium acnes HL037PA1]
gi|422544750|ref|ZP_16620585.1| ribosomal protein L13 [Propionibacterium acnes HL082PA1]
gi|422548384|ref|ZP_16624199.1| ribosomal protein L13 [Propionibacterium acnes HL050PA3]
gi|422550197|ref|ZP_16625996.1| ribosomal protein L13 [Propionibacterium acnes HL050PA1]
gi|422553334|ref|ZP_16629120.1| ribosomal protein L13 [Propionibacterium acnes HL005PA3]
gi|422556000|ref|ZP_16631761.1| ribosomal protein L13 [Propionibacterium acnes HL005PA2]
gi|422557906|ref|ZP_16633647.1| ribosomal protein L13 [Propionibacterium acnes HL025PA2]
gi|422559868|ref|ZP_16635583.1| ribosomal protein L13 [Propionibacterium acnes HL005PA1]
gi|422563687|ref|ZP_16639362.1| ribosomal protein L13 [Propionibacterium acnes HL046PA1]
gi|422568111|ref|ZP_16643735.1| ribosomal protein L13 [Propionibacterium acnes HL002PA2]
gi|422571594|ref|ZP_16647176.1| ribosomal protein L13 [Propionibacterium acnes HL067PA1]
gi|422579683|ref|ZP_16655202.1| ribosomal protein L13 [Propionibacterium acnes HL005PA4]
gi|313763179|gb|EFS34543.1| ribosomal protein L13 [Propionibacterium acnes HL013PA1]
gi|313773218|gb|EFS39184.1| ribosomal protein L13 [Propionibacterium acnes HL074PA1]
gi|313793316|gb|EFS41374.1| ribosomal protein L13 [Propionibacterium acnes HL110PA1]
gi|313801041|gb|EFS42309.1| ribosomal protein L13 [Propionibacterium acnes HL110PA2]
gi|313808780|gb|EFS47234.1| ribosomal protein L13 [Propionibacterium acnes HL087PA2]
gi|313810425|gb|EFS48139.1| ribosomal protein L13 [Propionibacterium acnes HL083PA1]
gi|313812241|gb|EFS49955.1| ribosomal protein L13 [Propionibacterium acnes HL025PA1]
gi|313816516|gb|EFS54230.1| ribosomal protein L13 [Propionibacterium acnes HL059PA1]
gi|313817961|gb|EFS55675.1| ribosomal protein L13 [Propionibacterium acnes HL046PA2]
gi|313819872|gb|EFS57586.1| ribosomal protein L13 [Propionibacterium acnes HL036PA1]
gi|313823363|gb|EFS61077.1| ribosomal protein L13 [Propionibacterium acnes HL036PA2]
gi|313828317|gb|EFS66031.1| ribosomal protein L13 [Propionibacterium acnes HL063PA2]
gi|313830079|gb|EFS67793.1| ribosomal protein L13 [Propionibacterium acnes HL007PA1]
gi|313832649|gb|EFS70363.1| ribosomal protein L13 [Propionibacterium acnes HL056PA1]
gi|313838007|gb|EFS75721.1| ribosomal protein L13 [Propionibacterium acnes HL086PA1]
gi|314914392|gb|EFS78223.1| ribosomal protein L13 [Propionibacterium acnes HL005PA4]
gi|314917715|gb|EFS81546.1| ribosomal protein L13 [Propionibacterium acnes HL050PA1]
gi|314919557|gb|EFS83388.1| ribosomal protein L13 [Propionibacterium acnes HL050PA3]
gi|314925800|gb|EFS89631.1| ribosomal protein L13 [Propionibacterium acnes HL036PA3]
gi|314930148|gb|EFS93979.1| ribosomal protein L13 [Propionibacterium acnes HL067PA1]
gi|314957108|gb|EFT01212.1| ribosomal protein L13 [Propionibacterium acnes HL027PA1]
gi|314957751|gb|EFT01854.1| ribosomal protein L13 [Propionibacterium acnes HL002PA1]
gi|314960810|gb|EFT04911.1| ribosomal protein L13 [Propionibacterium acnes HL002PA2]
gi|314963485|gb|EFT07585.1| ribosomal protein L13 [Propionibacterium acnes HL082PA1]
gi|314969933|gb|EFT14031.1| ribosomal protein L13 [Propionibacterium acnes HL037PA1]
gi|314973072|gb|EFT17168.1| ribosomal protein L13 [Propionibacterium acnes HL053PA1]
gi|314975568|gb|EFT19663.1| ribosomal protein L13 [Propionibacterium acnes HL045PA1]
gi|314979781|gb|EFT23875.1| ribosomal protein L13 [Propionibacterium acnes HL072PA2]
gi|314984852|gb|EFT28944.1| ribosomal protein L13 [Propionibacterium acnes HL005PA1]
gi|314986113|gb|EFT30205.1| ribosomal protein L13 [Propionibacterium acnes HL005PA2]
gi|314988727|gb|EFT32818.1| ribosomal protein L13 [Propionibacterium acnes HL005PA3]
gi|315077214|gb|EFT49279.1| ribosomal protein L13 [Propionibacterium acnes HL053PA2]
gi|315079896|gb|EFT51872.1| ribosomal protein L13 [Propionibacterium acnes HL078PA1]
gi|315083339|gb|EFT55315.1| ribosomal protein L13 [Propionibacterium acnes HL027PA2]
gi|315086888|gb|EFT58864.1| ribosomal protein L13 [Propionibacterium acnes HL002PA3]
gi|315089979|gb|EFT61955.1| ribosomal protein L13 [Propionibacterium acnes HL072PA1]
gi|315096701|gb|EFT68677.1| ribosomal protein L13 [Propionibacterium acnes HL038PA1]
gi|315097926|gb|EFT69902.1| ribosomal protein L13 [Propionibacterium acnes HL059PA2]
gi|315100691|gb|EFT72667.1| ribosomal protein L13 [Propionibacterium acnes HL046PA1]
gi|315109173|gb|EFT81149.1| ribosomal protein L13 [Propionibacterium acnes HL030PA2]
gi|327325114|gb|EGE66920.1| ribosomal protein L13 [Propionibacterium acnes HL096PA3]
gi|327325256|gb|EGE67061.1| ribosomal protein L13 [Propionibacterium acnes HL096PA2]
gi|327444057|gb|EGE90711.1| ribosomal protein L13 [Propionibacterium acnes HL043PA1]
gi|327449456|gb|EGE96110.1| ribosomal protein L13 [Propionibacterium acnes HL043PA2]
gi|327451482|gb|EGE98136.1| ribosomal protein L13 [Propionibacterium acnes HL087PA3]
gi|327451546|gb|EGE98200.1| ribosomal protein L13 [Propionibacterium acnes HL092PA1]
gi|327451831|gb|EGE98485.1| ribosomal protein L13 [Propionibacterium acnes HL083PA2]
gi|328752046|gb|EGF65662.1| ribosomal protein L13 [Propionibacterium acnes HL087PA1]
gi|328755423|gb|EGF69039.1| ribosomal protein L13 [Propionibacterium acnes HL025PA2]
gi|328756341|gb|EGF69957.1| ribosomal protein L13 [Propionibacterium acnes HL020PA1]
gi|328761327|gb|EGF74854.1| ribosomal protein L13 [Propionibacterium acnes HL099PA1]
gi|332676203|gb|AEE73019.1| 50S ribosomal protein L13 [Propionibacterium acnes 266]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 67 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|160894721|ref|ZP_02075496.1| hypothetical protein CLOL250_02272 [Clostridium sp. L2-50]
gi|156863655|gb|EDO57086.1| ribosomal protein L13 [Clostridium sp. L2-50]
Length = 144
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE+M + P + IR AV MLP+ L D KL ++ G +H
Sbjct: 80 YVGGMKETTLKEKMAKKPEDVIRLAVKGMLPKGPLGRDMITKLYVYAGPDH 130
>gi|154312340|ref|XP_001555498.1| mitochondrial 54S ribosomal protein YmL23 [Botryotinia fuckeliana
B05.10]
gi|347836773|emb|CCD51345.1| hypothetical protein [Botryotinia fuckeliana]
Length = 190
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV NL YR+ G LKE +++ ME+ E +RKAV MLP+
Sbjct: 80 YVVVTNCANLHTTGKKMYQKKYYRHNTRPGSLKEISMEGLMEKFGGAEVLRKAVSGMLPK 139
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G+ HP+
Sbjct: 140 NRLRDGRLGRLKAFEGAAHPY 160
>gi|422486865|ref|ZP_16563208.1| ribosomal protein L13 [Propionibacterium acnes HL013PA2]
gi|327449315|gb|EGE95969.1| ribosomal protein L13 [Propionibacterium acnes HL013PA2]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 67 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|357589472|ref|ZP_09128138.1| 50S ribosomal protein L13 [Corynebacterium nuruki S6-4]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L +L +E P I +A+ M+P N+L +KLR++ GSEHPF + E
Sbjct: 80 YPGGLTTLSLGRSLELHPERVIAEAITGMMPHNRLSRQSVKKLRVYAGSEHPFASQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|422395768|ref|ZP_16475801.1| ribosomal protein L13 [Propionibacterium acnes HL097PA1]
gi|422456844|ref|ZP_16533507.1| ribosomal protein L13 [Propionibacterium acnes HL030PA1]
gi|315106135|gb|EFT78111.1| ribosomal protein L13 [Propionibacterium acnes HL030PA1]
gi|327332273|gb|EGE74009.1| ribosomal protein L13 [Propionibacterium acnes HL097PA1]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 67 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|376296387|ref|YP_005167617.1| 50S ribosomal protein L13 [Desulfovibrio desulfuricans ND132]
gi|323458948|gb|EGB14813.1| ribosomal protein L13 [Desulfovibrio desulfuricans ND132]
Length = 142
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++ V+ Y++ H LKE+TL++ ++ P I AV MLP+N
Sbjct: 53 FVIVINADKIQVTGQKMDKKMYYKHTNHPGGLKEKTLRQMLDIKPENVITAAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEP 88
KL + +KL+++ G EHP + +P
Sbjct: 113 KLAAQQLKKLKVYAGPEHPHAAQAPKP 139
>gi|225849985|ref|YP_002730219.1| 50S ribosomal protein L13 [Persephonella marina EX-H1]
gi|254798509|sp|C0QU54.1|RL13_PERMH RecName: Full=50S ribosomal protein L13
gi|225646398|gb|ACO04584.1| ribosomal protein L13 [Persephonella marina EX-H1]
Length = 150
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVS--------YRYI----GHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ LN D+++V+ Y++ G L RTL+ +E P E IR AV RMLP+N
Sbjct: 53 FVIVLNADKITVTGKKLTDKEYKWHTNRPGGLNVRTLQWMLEHKPEEVIRLAVERMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL+ ++L+++ GSEH
Sbjct: 113 KLQKRFMKRLKVYTGSEH 130
>gi|313665544|ref|YP_004047415.1| 50S ribosomal protein L13 [Mycoplasma leachii PG50]
gi|392389142|ref|YP_005907551.1| 50S ribosomal protein L13 [Mycoplasma leachii 99/014/6]
gi|312949296|gb|ADR23892.1| ribosomal protein L13 [Mycoplasma leachii PG50]
gi|339276787|emb|CBV67366.1| 50S ribosomal protein L13 [Mycoplasma leachii 99/014/6]
Length = 151
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R++ Q E DPT+ + +A+ MLP+N ++ R L +F GSEHP+
Sbjct: 83 GGLKKRSVSVQRELDPTKILERAIRLMLPKNVQGSNQYRALHVFKGSEHPYA 134
>gi|422391336|ref|ZP_16471427.1| ribosomal protein L13 [Propionibacterium acnes HL103PA1]
gi|422459009|ref|ZP_16535658.1| ribosomal protein L13 [Propionibacterium acnes HL050PA2]
gi|422464231|ref|ZP_16540842.1| ribosomal protein L13 [Propionibacterium acnes HL060PA1]
gi|422566574|ref|ZP_16642207.1| ribosomal protein L13 [Propionibacterium acnes HL082PA2]
gi|422575061|ref|ZP_16650605.1| ribosomal protein L13 [Propionibacterium acnes HL001PA1]
gi|314924124|gb|EFS87955.1| ribosomal protein L13 [Propionibacterium acnes HL001PA1]
gi|314964965|gb|EFT09064.1| ribosomal protein L13 [Propionibacterium acnes HL082PA2]
gi|315093736|gb|EFT65712.1| ribosomal protein L13 [Propionibacterium acnes HL060PA1]
gi|315103954|gb|EFT75930.1| ribosomal protein L13 [Propionibacterium acnes HL050PA2]
gi|327325555|gb|EGE67354.1| ribosomal protein L13 [Propionibacterium acnes HL103PA1]
Length = 161
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 67 FVVVINASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|257785049|ref|YP_003180266.1| 50S ribosomal protein L13 [Atopobium parvulum DSM 20469]
gi|257473556|gb|ACV51675.1| ribosomal protein L13 [Atopobium parvulum DSM 20469]
Length = 146
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LK + KE ME+ P I AV MLP+ L + KL+++ G+EHP
Sbjct: 82 YLGGLKFESFKEAMEKHPERVIEHAVKGMLPKTTLGRKQGMKLKVYAGAEHP 133
>gi|269925861|ref|YP_003322484.1| 50S ribosomal protein L13 [Thermobaculum terrenum ATCC BAA-798]
gi|269789521|gb|ACZ41662.1| ribosomal protein L13 [Thermobaculum terrenum ATCC BAA-798]
Length = 146
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 4 IYVVFFILRNLFILSLNDEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIR 51
+Y F + I+ D++SV+ YR Y G +K TL+ + + PT A+
Sbjct: 43 VYTPFLDTGDFVIVVNADKISVTGKKLQQKVYYRHSGYPGGIKATTLEAMLAKHPTRALE 102
Query: 52 KAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
AV MLP+N+ D RKL+++ G EHP
Sbjct: 103 LAVKGMLPKNRRGRDLFRKLKVYAGPEHP 131
>gi|363419136|ref|ZP_09307237.1| 50S ribosomal protein L13 [Rhodococcus pyridinivorans AK37]
gi|359737221|gb|EHK86153.1| 50S ribosomal protein L13 [Rhodococcus pyridinivorans AK37]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D+++VS Y + GH L+ R++ E +E++P + KAV MLP+N
Sbjct: 53 FVVIINADKVAVSGNKRTDKFLYSHSGHPGGLRARSVGEVLEKNPDRLVEKAVTGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G HP + P+
Sbjct: 113 KLGRAIAKKLKVYAGPNHPHAAQQPVPF 140
>gi|334564642|ref|ZP_08517633.1| 50S ribosomal protein L13 [Corynebacterium bovis DSM 20582]
Length = 147
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL ME P + +A+ M+P NKL +KLR+F G EH F + E
Sbjct: 80 YPGGLKTLTLGRSMELHPERVVAEAIEGMMPHNKLSRASVKKLRVFAGPEHTFASQKPET 139
Query: 89 YVM 91
Y +
Sbjct: 140 YTI 142
>gi|289548262|ref|YP_003473250.1| 50S ribosomal protein L13 [Thermocrinis albus DSM 14484]
gi|289181879|gb|ADC89123.1| ribosomal protein L13 [Thermocrinis albus DSM 14484]
Length = 144
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 22 EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
E + YR Y G LK TL+ +E P E IR AV RMLP+N+L ++L++ G E
Sbjct: 70 EQKIYYRHSNYPGGLKAYTLRWMLENKPEEVIRLAVKRMLPKNRLGHRMMKRLKVLRGPE 129
Query: 79 HPF 81
HP+
Sbjct: 130 HPY 132
>gi|295099209|emb|CBK88298.1| LSU ribosomal protein L13P [Eubacterium cylindroides T2-87]
Length = 145
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
LN E ++ Y G L+ RT KE E+ P E + +A+ MLP KL D + + ++ GS
Sbjct: 70 LNTEKYYNHSGYFGGLRVRTAKEMKEKYPVEWVERAIKGMLPHTKLGDKQRTHVFVYAGS 129
Query: 78 EHPF-GDRPLE 87
EHP +P+E
Sbjct: 130 EHPHAAQQPVE 140
>gi|357633660|ref|ZP_09131538.1| ribosomal protein L13 [Desulfovibrio sp. FW1012B]
gi|386393833|ref|ZP_10078614.1| ribosomal protein L13, bacterial type [Desulfovibrio sp. U5L]
gi|357582214|gb|EHJ47547.1| ribosomal protein L13 [Desulfovibrio sp. FW1012B]
gi|385734711|gb|EIG54909.1| ribosomal protein L13, bacterial type [Desulfovibrio sp. U5L]
Length = 142
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE +L++ + + P + IRKAV MLP+N+L +KL+++ G HP
Sbjct: 80 WIGGLKETSLRDMLVKKPEDVIRKAVRGMLPKNRLGRAMLKKLKVYAGEAHP 131
>gi|319938470|ref|ZP_08012864.1| 50S ribosomal protein L13 [Coprobacillus sp. 29_1]
gi|319806386|gb|EFW03053.1| 50S ribosomal protein L13 [Coprobacillus sp. 29_1]
Length = 145
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
++G LK +T ++ E DPT + AV MLP N L + KL ++ GSEHP +P+E
Sbjct: 81 WLGGLKVKTARQFQEADPTGFVEAAVKGMLPHNTLGRKQGMKLFVYTGSEHPHAAQKPVE 140
>gi|300088166|ref|YP_003758688.1| 50S ribosomal protein L13 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527899|gb|ADJ26367.1| ribosomal protein L13 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 142
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++ +L E M + PT A+ +A+ MLPRN+L KLR++ G+EHP
Sbjct: 80 YPGGFRKASLNEMMAKKPTFALERAIRGMLPRNRLGAAMFGKLRVYAGAEHP 131
>gi|406997020|gb|EKE15210.1| Ribosomal protein L13 [uncultured bacterium]
Length = 144
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 18 SLNDEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
SL+ E + Y G L++ + +++D E I++AV ML +NK R DR ++ +FP +
Sbjct: 74 SLSKEYTNYSGYPGGLRKINFGDLLKKDSREIIKRAVSGMLAKNKFRSDRLNRVNVFPYA 133
Query: 78 EHPFGDR 84
EH F D+
Sbjct: 134 EHGFKDK 140
>gi|310779230|ref|YP_003967563.1| 50S ribosomal protein L13 [Ilyobacter polytropus DSM 2926]
gi|309748553|gb|ADO83215.1| LSU ribosomal protein L13P [Ilyobacter polytropus DSM 2926]
Length = 144
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILS-----LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N+ ++ L D+M ++ + G L+ER L+E + + P EA+ AV RMLP N
Sbjct: 55 FVIVTNMEKIAVTGKKLTDKMYYNHSGFPGGLRERRLEEVLAKKPEEALMLAVKRMLPNN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL ++ +LR+F G+EH
Sbjct: 115 KLGREQLTRLRVFVGAEH 132
>gi|154483151|ref|ZP_02025599.1| hypothetical protein EUBVEN_00852 [Eubacterium ventriosum ATCC
27560]
gi|149735959|gb|EDM51845.1| ribosomal protein L13 [Eubacterium ventriosum ATCC 27560]
Length = 142
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E + YR Y+G +KE TLKE++++ P I AV MLP+
Sbjct: 53 YVIITNADKITVTGKKLEQKIYYRHSDYVGGMKEMTLKEKLDKKPESVIELAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL ++ G EHP
Sbjct: 113 PLGRAMIKKLFVYAGPEHP 131
>gi|342889606|gb|EGU88644.1| hypothetical protein FOXB_00893 [Fusarium oxysporum Fo5176]
Length = 179
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQME-RDPTEAIRKAVLRMLPR 60
YVV L+ YR+ G LK T+ ME +E +RKAV MLP+
Sbjct: 67 YVVVTNCAALYTTGRKKWQKPYYRHTTRPGSLKSITMDALMEAHGGSEVLRKAVRGMLPK 126
Query: 61 NKLRDDRDRKLRIFPGSEHPFGD 83
N+LRD R +L+ F G HP+ D
Sbjct: 127 NRLRDKRLARLKAFEGDAHPYKD 149
>gi|340371877|ref|XP_003384471.1| PREDICTED: 39S ribosomal protein L13, mitochondrial-like
[Amphimedon queenslandica]
Length = 177
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG------ 82
Y G LKE K+ ++DPT+ + KA+ LP+N +R R +L +FP EHP+
Sbjct: 85 YPGGLKEILSKDVHKKDPTKVLYKAINGCLPKNGMRLKRMNRLYLFPDEEHPYAKNIYKV 144
Query: 83 -DRPLEPY 89
D P +P+
Sbjct: 145 LDGPCQPF 152
>gi|319404200|emb|CBI77793.1| 50S ribosomal protein L13 [Bartonella rochalimae ATCC BAA-1498]
Length = 154
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ GSEHP
Sbjct: 80 YIGGIKERTARQILEGRFPERVIEKAVERMIPRGPLGRRQMKNLRVYAGSEHP 132
>gi|451340362|ref|ZP_21910859.1| LSU ribosomal protein L13p (L13Ae) [Amycolatopsis azurea DSM 43854]
gi|449416918|gb|EMD22620.1| LSU ribosomal protein L13p (L13Ae) [Amycolatopsis azurea DSM 43854]
gi|452955145|gb|EME60545.1| 50S ribosomal protein L13 [Amycolatopsis decaplanina DSM 44594]
Length = 150
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNAEKVALTGNKREQKFAYRHSGYPGGLRKRSFGELLDTKPEHLLEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ G+EHP
Sbjct: 113 KLGRAQAKKLKVYAGAEHP 131
>gi|336116846|ref|YP_004571613.1| 50S ribosomal protein L13 [Microlunatus phosphovorus NM-1]
gi|334684625|dbj|BAK34210.1| 50S ribosomal protein L13 [Microlunatus phosphovorus NM-1]
Length = 147
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L+ +YR+ G LK + E ++ DP +A+ AV MLP+N
Sbjct: 53 FVVIVNASKIALSGNKRSTKQAYRHSGRPGGLKSVSYGELLDSDPRKAVELAVWGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
KL +KL+++ G EHP + +PY +
Sbjct: 113 KLSRKLIKKLKVYSGPEHPHTAQQPKPYAI 142
>gi|78357649|ref|YP_389098.1| 50S ribosomal protein L13 [Desulfovibrio alaskensis G20]
gi|118573398|sp|Q30Y43.1|RL13_DESDG RecName: Full=50S ribosomal protein L13
gi|78220054|gb|ABB39403.1| ribosomal protein L13 [Desulfovibrio alaskensis G20]
Length = 144
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G L+E+TL + P A+ AV MLPRN+L +KL+++ GSEHP
Sbjct: 80 YVGGLREQTLANVLATKPERALINAVKGMLPRNRLGRAMLKKLKVYAGSEHP 131
>gi|190576125|ref|YP_001973970.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia K279a]
gi|254523172|ref|ZP_05135227.1| ribosomal protein L13 [Stenotrophomonas sp. SKA14]
gi|344209142|ref|YP_004794283.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia JV3]
gi|386720239|ref|YP_006186565.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia D457]
gi|408822798|ref|ZP_11207688.1| 50S ribosomal protein L13 [Pseudomonas geniculata N1]
gi|226705041|sp|B2FJU4.1|RL13_STRMK RecName: Full=50S ribosomal protein L13
gi|190014047|emb|CAQ47687.1| putative 50S ribosomal protein L13 [Stenotrophomonas maltophilia
K279a]
gi|219720763|gb|EED39288.1| ribosomal protein L13 [Stenotrophomonas sp. SKA14]
gi|343780504|gb|AEM53057.1| ribosomal protein L13 [Stenotrophomonas maltophilia JV3]
gi|384079801|emb|CCH14404.1| LSU ribosomal protein L13p (L13Ae) [Stenotrophomonas maltophilia
D457]
gi|456735123|gb|EMF59893.1| LSU ribosomal protein L13p (L13Ae) [Stenotrophomonas maltophilia
EPM1]
Length = 142
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L + +ER P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLAQALERHPERVIEIAVKGMLPKGPLGRQMYRKLKVYAGTEHP 131
>gi|424670440|ref|ZP_18107465.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia Ab55555]
gi|401070898|gb|EJP79412.1| 50S ribosomal protein L13 [Stenotrophomonas maltophilia Ab55555]
Length = 142
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L + +ER P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLAQALERHPERVIEIAVKGMLPKGPLGRQMYRKLKVYAGTEHP 131
>gi|449296610|gb|EMC92629.1| hypothetical protein BAUCODRAFT_256128 [Baudoinia compniacensis
UAMH 10762]
Length = 166
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ + Y + G LKE T+++ M + E +R+AV MLP+
Sbjct: 56 YVVVTNCSQLYATGKKMQQKKYYSHTTRPGSLKEMTMEKVMAKWGGGEVLRRAVRGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRDDR +L+ F G HP+
Sbjct: 116 NRLRDDRMARLKCFEGERHPY 136
>gi|384085804|ref|ZP_09996979.1| 50S ribosomal protein L13 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK + ++ ME P I AV MLP+N L RKL+++ GSEHP
Sbjct: 80 YVGNLKSASFEKMMETHPERIIEIAVKGMLPKNSLGRAMYRKLKVYSGSEHP 131
>gi|319407210|emb|CBI80849.1| 50S ribosomal protein L13 [Bartonella sp. 1-1C]
Length = 154
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ GSEHP
Sbjct: 80 YIGGIKERTARQILEGRFPERVIEKAVERMIPRGPLGRRQMKNLRVYAGSEHP 132
>gi|319898875|ref|YP_004158968.1| 50S ribosomal protein L13 [Bartonella clarridgeiae 73]
gi|319402839|emb|CBI76390.1| 50S ribosomal protein L13 [Bartonella clarridgeiae 73]
Length = 154
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ GSEHP
Sbjct: 80 YIGGIKERTARQILEGRFPERVIEKAVERMIPRGPLGRRQMKNLRVYAGSEHP 132
>gi|426402484|ref|YP_007021455.1| 50S ribosomal protein L13 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859152|gb|AFY00188.1| 50S ribosomal protein L13 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 146
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
R+ G +KE T + E+D T I +AV MLP NKL K++ + G+EHP +
Sbjct: 79 RFFGSMKEMTAAQAKEKDSTFIIHEAVRGMLPTNKLSRHVIMKMKTYTGAEHPHAAQKPA 138
Query: 88 PYVMPPRR 95
+ +P ++
Sbjct: 139 LFTLPSKK 146
>gi|407011282|gb|EKE25968.1| 50S ribosomal protein L13 [uncultured bacterium (gcode 4)]
Length = 143
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
++ LKE L + PTEA+R AV MLP+NKL DD +L++ GS H F +P++
Sbjct: 81 HMWSLKETNLASLNAKKPTEALRLAVSWMLPKNKLHDDMLLRLKLEVGSSHKFEAQKPIK 140
>gi|261192362|ref|XP_002622588.1| mitochondrial 54S ribosomal protein YmL23 [Ajellomyces dermatitidis
SLH14081]
gi|239589463|gb|EEQ72106.1| ribosomal protein L13 [Ajellomyces dermatitidis SLH14081]
gi|239615177|gb|EEQ92164.1| ribosomal protein L13 [Ajellomyces dermatitidis ER-3]
gi|327349698|gb|EGE78555.1| ribosomal protein L13 [Ajellomyces dermatitidis ATCC 18188]
Length = 180
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE-- 87
G LK T+ + E+ E +RKAV MLP+N+LR+ R +L++F G HP+ L+
Sbjct: 85 GSLKSMTMDKMFEKWGGGEVLRKAVSGMLPKNRLREKRLARLKVFEGHAHPYKKNILKIG 144
Query: 88 -PYVMPPRRVRELRPRVRRAMIREQKKAEM 116
V+ P P V+ A +E K AEM
Sbjct: 145 GKSVLGPTSSIADSPLVKEAFAKE-KAAEM 173
>gi|403715730|ref|ZP_10941406.1| 50S ribosomal protein L13 [Kineosphaera limosa NBRC 100340]
gi|403210493|dbj|GAB96089.1| 50S ribosomal protein L13 [Kineosphaera limosa NBRC 100340]
Length = 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L+ + + M + P +A+ KA+ MLP+N
Sbjct: 53 FVIIVNADKVALTGAKLEQKKAYRHSGYPGGLRATSYTQLMAKSPEKAVEKAIRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+I+ G+EHP + +P+
Sbjct: 113 SLGRQQLSKLKIYAGAEHPHQAQQPQPF 140
>gi|32265997|ref|NP_860029.1| 50S ribosomal protein L13 [Helicobacter hepaticus ATCC 51449]
gi|81712943|sp|Q7VIV6.1|RL13_HELHP RecName: Full=50S ribosomal protein L13
gi|32262046|gb|AAP77095.1| ribosomal protein L13 [Helicobacter hepaticus ATCC 51449]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TL+E +E+ P + AV MLP+NKL +KL+++ GSEHP
Sbjct: 81 YFGSTKSKTLQEMLEKTPEKLYHLAVRGMLPKNKLGRAMLKKLKVYRGSEHP 132
>gi|308178100|ref|YP_003917506.1| 50S ribosomal protein L13 [Arthrobacter arilaitensis Re117]
gi|307745563|emb|CBT76535.1| 50S ribosomal protein L13 [Arthrobacter arilaitensis Re117]
Length = 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LK + +E++P A+ KA+ MLP+NKL D + KL+++ G+EHP
Sbjct: 82 GGLKSINYADLLEKNPVLAVEKAIKGMLPKNKLSDAQLSKLKVYRGAEHP 131
>gi|156837338|ref|XP_001642697.1| hypothetical protein Kpol_364p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113256|gb|EDO14839.1| hypothetical protein Kpol_364p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 165
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GHLK + +E + EA++KAV MLPRNKLR R +L++F GSEHP+
Sbjct: 85 GHLKLTPMNRLVENKGFNEALKKAVKGMLPRNKLRKVRLERLKVFDGSEHPY 136
>gi|440636482|gb|ELR06401.1| hypothetical protein GMDG_02118 [Geomyces destructans 20631-21]
Length = 181
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK+ ++ ME+ E +RKAV MLP+N+LRDDR +L+ F G HP+
Sbjct: 104 GSLKQINMEGLMEKFGGAEVLRKAVSGMLPKNRLRDDRLARLKAFEGDSHPY 155
>gi|340795256|ref|YP_004760719.1| 50S ribosomal protein L13 [Corynebacterium variabile DSM 44702]
gi|340535166|gb|AEK37646.1| 50S ribosomal protein L13 [Corynebacterium variabile DSM 44702]
Length = 147
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +L +E P + +A+ M+P N+L +KLR++ G+EHPF + E
Sbjct: 80 YPGGLKTMSLGRSLELHPERVVAEAITGMMPHNRLSRQSVKKLRVYAGAEHPFAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|313142929|ref|ZP_07805122.1| 50S ribosomal protein L13 [Helicobacter cinaedi CCUG 18818]
gi|386762179|ref|YP_006235815.1| 50S ribosomal protein L13 [Helicobacter cinaedi PAGU611]
gi|313127960|gb|EFR45577.1| 50S ribosomal protein L13 [Helicobacter cinaedi CCUG 18818]
gi|385147196|dbj|BAM12704.1| 50S ribosomal protein L13 [Helicobacter cinaedi PAGU611]
gi|396079575|dbj|BAM32951.1| 50S ribosomal protein L13 [Helicobacter cinaedi ATCC BAA-847]
Length = 142
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TL+E +E+ P + AV MLP+NKL +KL+++ GSEHP
Sbjct: 81 YFGSTKSKTLQEMLEKHPEKLYHLAVRGMLPKNKLGRAMLKKLKVYRGSEHP 132
>gi|425734257|ref|ZP_18852576.1| 50S ribosomal protein L13 [Brevibacterium casei S18]
gi|425481524|gb|EKU48683.1| 50S ribosomal protein L13 [Brevibacterium casei S18]
Length = 147
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK E + +P A+ KAV M+P+ +L + RKL+++ G+EHP + +P
Sbjct: 80 YPGGLKSVNYAELLASNPERAVEKAVAGMVPKTRLGRAQMRKLKVYAGAEHPHASQNPQP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|224542276|ref|ZP_03682815.1| hypothetical protein CATMIT_01451 [Catenibacterium mitsuokai DSM
15897]
gi|224524818|gb|EEF93923.1| ribosomal protein L13 [Catenibacterium mitsuokai DSM 15897]
Length = 144
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
++G LK +T ++ E++PT + A+ MLP N L + +KL ++ GSEHP +P+E
Sbjct: 81 FLGGLKVKTARQFQEQNPTGFVETAIKGMLPHNTLGRQQAKKLFVYAGSEHPHAAQKPVE 140
>gi|50306413|ref|XP_453180.1| mitochondrial 54S ribosomal protein YmL23 [Kluyveromyces lactis
NRRL Y-1140]
gi|5679594|emb|CAB51776.1| mitochondrial ribosomal protein L23 [Kluyveromyces lactis]
gi|49642314|emb|CAH00276.1| KLLA0D02508p [Kluyveromyces lactis]
Length = 155
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP-------FG 82
G LK T+++ + + +E ++KAV MLP+NKLR R +L+IF GSEHP F
Sbjct: 85 GSLKLTTMEDMISNKGYSEVLKKAVSGMLPKNKLRKIRLARLKIFDGSEHPYKSNITAFA 144
Query: 83 DRPLE 87
D+ LE
Sbjct: 145 DQQLE 149
>gi|402575235|ref|YP_006608127.1| 50S ribosomal protein L13 [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|407453243|ref|YP_006732562.1| 50S ribosomal protein L13 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681607|ref|YP_006796783.1| 50S ribosomal protein L13 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681885|ref|YP_006797060.1| LSU ribosomal protein L13p (L13Ae) [Candidatus Portiera
aleyrodidarum BT-B-HRs]
gi|401872039|gb|AFQ24207.1| LSU ribosomal protein L13P [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|405779960|gb|AFS18963.1| 50S ribosomal protein L13 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407243218|gb|AFT80619.1| LSU ribosomal protein L13p (L13Ae) [Candidatus Portiera
aleyrodidarum BT-QVLC]
gi|407243496|gb|AFT80896.1| LSU ribosomal protein L13p (L13Ae) [Candidatus Portiera
aleyrodidarum BT-B-HRs]
Length = 142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP-FGDRPLE 87
Y G L++ TL E M+++P + I+++V MLP+N L +KL+I+ G +HP +PLE
Sbjct: 80 YPGGLRKTTLLELMKKNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLE 139
>gi|300175694|emb|CBK21237.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
+ G LK RTLKE E++P + + +AV MLP+N LR +R ++LRI+ HP
Sbjct: 45 WPGGLKSRTLKEMEEKNPEKILWQAVYGMLPKNHLRKERIQRLRIYMEENHPHA 98
>gi|380510901|ref|ZP_09854308.1| 50S ribosomal protein L13 [Xanthomonas sacchari NCPPB 4393]
Length = 142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L++ +ER P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLEQALERHPERVIEIAVKGMLPKGPLGRAMYRKLKVYSGAEHP 131
>gi|396490933|ref|XP_003843452.1| similar to 50S ribosomal protein L13 [Leptosphaeria maculans JN3]
gi|312220031|emb|CBX99973.1| similar to 50S ribosomal protein L13 [Leptosphaeria maculans JN3]
Length = 175
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
G LKE ++ + + E +RKAV MLP+N+LR DR +L++F G HP+G+ L+
Sbjct: 85 GSLKELSMDRMIAKWGGGEVLRKAVSGMLPKNRLRQDRLARLKVFEGRAHPYGENILK 142
>gi|145596375|ref|YP_001160672.1| 50S ribosomal protein L13 [Salinispora tropica CNB-440]
gi|159039773|ref|YP_001539026.1| 50S ribosomal protein L13 [Salinispora arenicola CNS-205]
gi|189041019|sp|A8M4C0.1|RL13_SALAI RecName: Full=50S ribosomal protein L13
gi|189041022|sp|A4XBI7.1|RL13_SALTO RecName: Full=50S ribosomal protein L13
gi|145305712|gb|ABP56294.1| LSU ribosomal protein L13P [Salinispora tropica CNB-440]
gi|157918608|gb|ABW00036.1| ribosomal protein L13 [Salinispora arenicola CNS-205]
Length = 147
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + ++YR Y G LK+ E + + P AI AV MLP N
Sbjct: 53 FVVIVNAGKVALTGNKRQQKIAYRHSGYPGGLKQLGYDELLTKRPERAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G+EHP G + P+
Sbjct: 113 KLGRKLIKKLKVYAGAEHPHGAQQPVPF 140
>gi|253701943|ref|YP_003023132.1| 50S ribosomal protein L13 [Geobacter sp. M21]
gi|259645557|sp|C6E4S8.1|RL13_GEOSM RecName: Full=50S ribosomal protein L13
gi|251776793|gb|ACT19374.1| ribosomal protein L13 [Geobacter sp. M21]
Length = 142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D++ S+ Y G LKE T + +++ P E ++KAV MLP+NKL +KL+I+ G
Sbjct: 69 LADKVYYSHSSYPGGLKEITAGKLLDKKPEELLKKAVKGMLPKNKLARHMLKKLKIYSGG 128
Query: 78 EHP 80
HP
Sbjct: 129 AHP 131
>gi|111023133|ref|YP_706105.1| 50S ribosomal protein L13 [Rhodococcus jostii RHA1]
gi|384106874|ref|ZP_10007778.1| 50S ribosomal protein L13 [Rhodococcus imtechensis RKJ300]
gi|397736556|ref|ZP_10503237.1| ribosomal protein L13 [Rhodococcus sp. JVH1]
gi|419961219|ref|ZP_14477228.1| 50S ribosomal protein L13 [Rhodococcus opacus M213]
gi|424851628|ref|ZP_18276025.1| 50S ribosomal protein L13 [Rhodococcus opacus PD630]
gi|432333328|ref|ZP_19585115.1| 50S ribosomal protein L13 [Rhodococcus wratislaviensis IFP 2016]
gi|122955184|sp|Q0S3D9.1|RL13_RHOSR RecName: Full=50S ribosomal protein L13
gi|110822663|gb|ABG97947.1| 50S ribosomal protein L13 [Rhodococcus jostii RHA1]
gi|356666293|gb|EHI46364.1| 50S ribosomal protein L13 [Rhodococcus opacus PD630]
gi|383833325|gb|EID72788.1| 50S ribosomal protein L13 [Rhodococcus imtechensis RKJ300]
gi|396927466|gb|EJI94694.1| ribosomal protein L13 [Rhodococcus sp. JVH1]
gi|414573540|gb|EKT84224.1| 50S ribosomal protein L13 [Rhodococcus opacus M213]
gi|430779733|gb|ELB94869.1| 50S ribosomal protein L13 [Rhodococcus wratislaviensis IFP 2016]
Length = 147
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + I E Y + GH LK R++ E ++++P + KA++ MLP+N
Sbjct: 53 FVVIINAEKVAISGNKREGKFLYHHSGHPGGLKSRSVGEVLDKNPDRLVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G HP + P+
Sbjct: 113 KLGRAISSKLKVYAGPNHPHAAQQPVPF 140
>gi|220935950|ref|YP_002514849.1| 50S ribosomal protein L13 [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254798515|sp|B8GNH1.1|RL13_THISH RecName: Full=50S ribosomal protein L13
gi|219997260|gb|ACL73862.1| 50S ribosomal protein L13 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 142
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIGH+K + MER P AI AV MLP+N L +KL+++ G+EH
Sbjct: 80 YIGHMKSMNFNQLMERAPERAIEFAVKGMLPKNPLGRAMFKKLKVYAGTEH 130
>gi|406861800|gb|EKD14853.1| 50S ribosomal protein l13 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 184
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L + YR+ G LK ++ M + E +RKAV MLP+
Sbjct: 75 YVVVTNCSELHTTGKKRWQKLYYRHNTRPGSLKTVSMDGLMAKLGGAEVLRKAVSGMLPK 134
Query: 61 NKLRDDRDRKLRIFPGSEHPFGDRPL-----EPYVMPPRRVRELRPRVR 104
N+LRDDR +L+ F G HP+ D + P V E +P+VR
Sbjct: 135 NRLRDDRLSRLKAFEGDAHPYKDNIVRFKGKSMVAEWPTGVEETKPKVR 183
>gi|224370130|ref|YP_002604294.1| 50S ribosomal protein L13 [Desulfobacterium autotrophicum HRM2]
gi|223692847|gb|ACN16130.1| RplM [Desulfobacterium autotrophicum HRM2]
Length = 144
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK T KE + + P E +R+AV MLP+N+L + KL ++ G EHP
Sbjct: 82 YTGSLKSITAKELLVKQPEELVRRAVRGMLPKNRLGRKLNNKLYVYAGEEHP 133
>gi|336324190|ref|YP_004604157.1| 50S ribosomal protein L13 [Flexistipes sinusarabici DSM 4947]
gi|336107771|gb|AEI15589.1| ribosomal protein L13 [Flexistipes sinusarabici DSM 4947]
Length = 141
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LKE+ L++ + P E ++ AV RMLP+N+L +KL+++ G HP
Sbjct: 79 YLGGLKEKNLEQMLTDKPEEVLKLAVKRMLPKNRLGRQMLKKLKVYAGESHP 130
>gi|297571890|ref|YP_003697664.1| 50S ribosomal protein L13 [Arcanobacterium haemolyticum DSM 20595]
gi|296932237|gb|ADH93045.1| ribosomal protein L13 [Arcanobacterium haemolyticum DSM 20595]
Length = 160
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + E ++YR+ G L + E +E +P +A+ KAV MLP+N
Sbjct: 66 FVVIINAEKVALTGSKREQKIAYRHSGQPGGLTATSYTELLELNPEKAVMKAVAGMLPKN 125
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 126 TLGRQQLSKLKVYRGAEHP 144
>gi|257054515|ref|YP_003132347.1| 50S ribosomal protein L13 [Saccharomonospora viridis DSM 43017]
gi|256584387|gb|ACU95520.1| LSU ribosomal protein L13P [Saccharomonospora viridis DSM 43017]
Length = 150
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L++R+ E +E P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKREQKLAYRHSGYPGGLRKRSYGELLETRPERLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G +HP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPDHPHAAQKPQPH 140
>gi|256390179|ref|YP_003111743.1| 50S ribosomal protein L13 [Catenulispora acidiphila DSM 44928]
gi|256356405|gb|ACU69902.1| ribosomal protein L13 [Catenulispora acidiphila DSM 44928]
Length = 147
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ E ++YR Y G L+ + +++DP +A+ KAV MLP+N
Sbjct: 53 FVIIINAEKVHLSGNKREDKLAYRHSGYPGGLRSIKYGDLIDKDPRKAVEKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
L + KL+++ G EHP + EP+V+
Sbjct: 113 SLGRQQLSKLKVYRGEEHPHAAQKPEPFVI 142
>gi|295395153|ref|ZP_06805361.1| 50S ribosomal protein L13 [Brevibacterium mcbrellneri ATCC 49030]
gi|294971915|gb|EFG47782.1| 50S ribosomal protein L13 [Brevibacterium mcbrellneri ATCC 49030]
Length = 159
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E +YR Y G +K E M P A+ KAV M+P+N
Sbjct: 65 YVIIINAEKVALTGAKLEQKRAYRHSNYPGGIKSVNYAELMATKPVLAVEKAVAGMVPKN 124
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L ++ RKL+++ G EHP + Y
Sbjct: 125 RLGREQMRKLKVYAGPEHPHASHNPQTY 152
>gi|389630378|ref|XP_003712842.1| 50S ribosomal protein L13 [Magnaporthe oryzae 70-15]
gi|351645174|gb|EHA53035.1| 50S ribosomal protein L13 [Magnaporthe oryzae 70-15]
gi|440467820|gb|ELQ37016.1| 54S ribosomal protein L23 [Magnaporthe oryzae Y34]
gi|440484753|gb|ELQ64780.1| 54S ribosomal protein L23 [Magnaporthe oryzae P131]
Length = 183
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ + YR+ G LK T+ M++ +E +RKAV MLP+
Sbjct: 71 YVVVTNCAALYTTGMKKYRKTYYRHNTRPGSLKSVTMDVLMDKFGGSEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHP-------FGDR 84
N+LRD R +L+ F G HP FGD+
Sbjct: 131 NRLRDKRLARLKAFEGEAHPYKRNIVRFGDK 161
>gi|367008804|ref|XP_003678903.1| mitochondrial 54S ribosomal protein YmL23 [Torulaspora delbrueckii]
gi|359746560|emb|CCE89692.1| hypothetical protein TDEL_0A03600 [Torulaspora delbrueckii]
Length = 164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQM-ERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GHLK RT+++ + ++ E ++KAV MLP+NKLR R +L++F G++HP+
Sbjct: 85 GHLKLRTMEKVVADKGFGEILKKAVSGMLPKNKLRKPRLERLKVFDGADHPY 136
>gi|302038062|ref|YP_003798384.1| 50S ribosomal protein L13 [Candidatus Nitrospira defluvii]
gi|300606126|emb|CBK42459.1| 50S ribosomal protein L13 [Candidatus Nitrospira defluvii]
Length = 143
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 21 DEMSVSYR--YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
++ + SY Y G LK T + ++DPT+ + +A+ MLP+N L + +KLR++ GS
Sbjct: 71 EDKTYSYHTGYPGGLKTLTAEHIHKKDPTKLLTRAIEGMLPKNPLGNQMAKKLRVYAGST 130
Query: 79 HPFGDRPLE 87
HP + LE
Sbjct: 131 HPHHAQQLE 139
>gi|258404863|ref|YP_003197605.1| 50S ribosomal protein L13 [Desulfohalobium retbaense DSM 5692]
gi|257797090|gb|ACV68027.1| ribosomal protein L13 [Desulfohalobium retbaense DSM 5692]
Length = 145
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
+ND+M + Y G LKE +L+E ++ P + I +AV MLP+N+L +KL+++ G
Sbjct: 72 MNDKMYYRHSGYPGGLKEASLREMLDTKPEKVIYEAVKGMLPKNRLGRAMLKKLKVYAGP 131
Query: 78 EHP 80
EHP
Sbjct: 132 EHP 134
>gi|407982534|ref|ZP_11163209.1| ribosomal protein L13 [Mycobacterium hassiacum DSM 44199]
gi|407375847|gb|EKF24788.1| ribosomal protein L13 [Mycobacterium hassiacum DSM 44199]
Length = 147
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D+++V+ YR Y G L+ R L E ++R P + KA++ MLP+N
Sbjct: 53 FVIVINADKVAVTGNKRQDKFIYRHSGYPGGLRRRALGELLDRHPDRVVEKAIVGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L +KLR++ G HP + PY
Sbjct: 113 RLGRQIKKKLRVYAGPNHPHTAQQPIPY 140
>gi|404258045|ref|ZP_10961368.1| 50S ribosomal protein L13 [Gordonia namibiensis NBRC 108229]
gi|409389324|ref|ZP_11241176.1| 50S ribosomal protein L13 [Gordonia rubripertincta NBRC 101908]
gi|403200616|dbj|GAB84410.1| 50S ribosomal protein L13 [Gordonia rubripertincta NBRC 101908]
gi|403403652|dbj|GAB99777.1| 50S ribosomal protein L13 [Gordonia namibiensis NBRC 108229]
Length = 147
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S E ++Y + GH LK RT E +E P I KAV MLP N
Sbjct: 53 FVIIINAEKVALTSNKAERKLNYTHSGHPGGLKSRTTAELLETFPERVIEKAVKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|86749788|ref|YP_486284.1| 50S ribosomal protein L13 [Rhodopseudomonas palustris HaA2]
gi|123408051|sp|Q2IWN7.1|RL13_RHOP2 RecName: Full=50S ribosomal protein L13
gi|86572816|gb|ABD07373.1| LSU ribosomal protein L13P [Rhodopseudomonas palustris HaA2]
Length = 154
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KERT K +E R P + KAV RM+PR L + LR++PG+EHP
Sbjct: 80 FIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRVQMGNLRVYPGAEHP 132
>gi|169825176|ref|YP_001692787.1| 50S ribosomal protein L13 [Finegoldia magna ATCC 29328]
gi|302380444|ref|ZP_07268912.1| ribosomal protein L13 [Finegoldia magna ACS-171-V-Col3]
gi|303233616|ref|ZP_07320273.1| ribosomal protein L13 [Finegoldia magna BVS033A4]
gi|417925180|ref|ZP_12568607.1| ribosomal protein L13 [Finegoldia magna SY403409CC001050417]
gi|226702860|sp|B0S3F7.1|RL13_FINM2 RecName: Full=50S ribosomal protein L13
gi|167831981|dbj|BAG08897.1| 50S ribosomal protein L13 [Finegoldia magna ATCC 29328]
gi|302311755|gb|EFK93768.1| ribosomal protein L13 [Finegoldia magna ACS-171-V-Col3]
gi|302495285|gb|EFL55034.1| ribosomal protein L13 [Finegoldia magna BVS033A4]
gi|341592477|gb|EGS35363.1| ribosomal protein L13 [Finegoldia magna SY403409CC001050417]
Length = 143
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK T K+ M++DP A+ A++ MLP N L +KLR++ G++H
Sbjct: 80 YAGGLKSITYKDLMQKDPERAVTHAIVGMLPHNSLGRQMAKKLRVYRGADH 130
>gi|441511603|ref|ZP_20993452.1| 50S ribosomal protein L13 [Gordonia amicalis NBRC 100051]
gi|441453583|dbj|GAC51413.1| 50S ribosomal protein L13 [Gordonia amicalis NBRC 100051]
Length = 147
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + S E ++Y + GH LK RT E +E P I KA+ MLP N
Sbjct: 53 FVVIINAEKVALTSNKAERKLNYTHSGHPGGLKSRTTAELLETFPERVIEKAIKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|406939585|gb|EKD72571.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 150
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ +++ I + Y + GH +K+ ++ +DPT A+R A+ MLP+N
Sbjct: 55 YIIIINAKDIAITGKKRKEKRYYHHSGHPGGIKDVVFEKLHAKDPTAALRIAIKGMLPKN 114
Query: 62 KL-RDDRDRKLRIFPGSEHP 80
L R +KL+I+PGSEHP
Sbjct: 115 ILGRSLLKKKLKIYPGSEHP 134
>gi|167748468|ref|ZP_02420595.1| hypothetical protein ANACAC_03212 [Anaerostipes caccae DSM 14662]
gi|317472000|ref|ZP_07931332.1| ribosomal protein L13 [Anaerostipes sp. 3_2_56FAA]
gi|167652460|gb|EDR96589.1| ribosomal protein L13 [Anaerostipes caccae DSM 14662]
gi|316900404|gb|EFV22386.1| ribosomal protein L13 [Anaerostipes sp. 3_2_56FAA]
Length = 144
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE+M + P + I AV MLP+ L +KL ++ G+EH
Sbjct: 80 YVGGMKETTLKEKMAKKPEDVIYLAVKGMLPKGPLGRAMIKKLHVYAGAEH 130
>gi|406970973|gb|EKD95181.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 140
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 33 LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
L+E +++ +E++PT+ + KAV MLP+N+LR +R L ++ G EHP
Sbjct: 85 LREEKIEKILEKNPTQILVKAVTGMLPKNRLRSERLTNLHVYAGPEHP 132
>gi|379756272|ref|YP_005344944.1| 50S ribosomal protein L13 [Mycobacterium intracellulare MOTT-02]
gi|378806488|gb|AFC50623.1| 50S ribosomal protein L13 [Mycobacterium intracellulare MOTT-02]
Length = 125
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
++YR Y G L RT++E M + P + A++ MLP+NKL RKL ++ G HP
Sbjct: 51 LAYRHSGYPGGLSSRTIRELMAKHPDRVVEDAIVGMLPKNKLARQIARKLHVYAGPTHPH 110
Query: 82 GDRPLEPY 89
+ PY
Sbjct: 111 VAQQPVPY 118
>gi|392414945|ref|YP_006451550.1| LSU ribosomal protein L13P [Mycobacterium chubuense NBB4]
gi|390614721|gb|AFM15871.1| LSU ribosomal protein L13P [Mycobacterium chubuense NBB4]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLN-DEMS--VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +++ D+++ +YR Y G L+ RT+ E + + PT + A++ MLP N
Sbjct: 53 FVIIINAEKVAIGGDKLTKKFAYRHSGYPGGLRRRTIGELLAKHPTRVVENAIVGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G HP
Sbjct: 113 KLSRQVQKKLKVYAGPAHP 131
>gi|311744768|ref|ZP_07718564.1| 50S ribosomal protein L13 [Aeromicrobium marinum DSM 15272]
gi|311311885|gb|EFQ81806.1| 50S ribosomal protein L13 [Aeromicrobium marinum DSM 15272]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEM---SVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ ++YR Y G LK + +E+D +AI K+V MLP+N
Sbjct: 53 FVIIVNAEKVALSGNKRTDKLAYRHSGYPGGLKSIAYGDLLEKDARKAIEKSVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L D KL+++ G EHP + +P+
Sbjct: 113 RLGDQLIGKLKVYSGPEHPHAAQKPQPF 140
>gi|453363678|dbj|GAC80620.1| 50S ribosomal protein L13 [Gordonia malaquae NBRC 108250]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+++ +N D+++VS Y + GH LK RT+ E + P + KAV MLP+N
Sbjct: 53 YVVIINADKVAVSGNKLTDKRLYHHSGHPGGLKSRTVGEVLATRPDRLVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPF 81
KL D KL+++ G HP
Sbjct: 113 KLGDQIASKLKVYAGPNHPH 132
>gi|118581489|ref|YP_902739.1| 50S ribosomal protein L13 [Pelobacter propionicus DSM 2379]
gi|166982781|sp|A1ATL1.1|RL13_PELPD RecName: Full=50S ribosomal protein L13
gi|118504199|gb|ABL00682.1| LSU ribosomal protein L13P [Pelobacter propionicus DSM 2379]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LKE + + +E+ P E I++AV MLP+NKL +KL+I+ GS HP
Sbjct: 82 GGLKEISAGKLLEKKPEELIKRAVKGMLPKNKLSRHMLKKLKIYAGSSHP 131
>gi|156064191|ref|XP_001598017.1| mitochondrial 54S ribosomal protein YmL23 [Sclerotinia sclerotiorum
1980 UF-70]
gi|154690965|gb|EDN90703.1| hypothetical protein SS1G_00103 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 190
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV NL YR+ G LKE +++ ME+ E +RKAV MLP+
Sbjct: 80 YVVVTNCANLHTTGKKMYQKKYYRHNTRPGSLKEISMEGLMEKLGGAEVLRKAVSGMLPK 139
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 140 NRLRDGRLGRLKAFEGEAHPY 160
>gi|453381635|dbj|GAC83848.1| 50S ribosomal protein L13 [Gordonia paraffinivorans NBRC 108238]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S E ++Y + GH LK RT E +E P I KAV MLP N
Sbjct: 53 FVIIVNAEKVALTSNKAERKLNYTHSGHPGGLKSRTTAELLETFPERVIEKAVKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|376289722|ref|YP_005161969.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae C7 (beta)]
gi|372103118|gb|AEX66715.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae C7 (beta)]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E P + +++ M+P N+L +KLR+F GSEHP+ + E
Sbjct: 80 YPGGLKTMTLGRSLEVHPERVVEESIRGMMPHNRLSRASVKKLRVFAGSEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|379012658|ref|YP_005270470.1| 50S ribosomal protein L13 [Acetobacterium woodii DSM 1030]
gi|375303447|gb|AFA49581.1| 50S ribosomal protein L13 [Acetobacterium woodii DSM 1030]
Length = 145
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LKE T ++ + P + KAV M+P NKL D KL+++ G+EHP + E
Sbjct: 83 YCGGLKEMTYRKFLAEKPELLVYKAVKGMIPHNKLGDKIATKLKVYAGNEHPHAAQLPEV 142
Query: 89 Y 89
Y
Sbjct: 143 Y 143
>gi|325095246|gb|EGC48556.1| 50S ribosomal protein [Ajellomyces capsulatus H88]
Length = 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE-- 87
G LK T+ + E+ E +RKAV MLP+N+LRD R +L++F G HP+ L+
Sbjct: 85 GSLKSMTMDKMFEKWGGGEVLRKAVSGMLPKNRLRDKRLARLKVFEGHAHPYKKNILKLA 144
Query: 88 -PYVMPPRRVRELRPRVRRAMIREQKKAE 115
V+ P P ++ A +E K AE
Sbjct: 145 GKSVLGPTNSIADSPLIKEAFAKE-KGAE 172
>gi|345877232|ref|ZP_08828986.1| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344225781|gb|EGV52130.1| 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase [endosymbiont
of Riftia pachyptila (vent Ph05)]
Length = 153
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + YIG+LK +L++ +++ P AI AV M+P+N L +KLR+F G
Sbjct: 80 LKDKMYHHHTGYIGNLKSISLEKLLQKAPERAIEHAVKGMMPKNTLGRAMFKKLRVFAGP 139
Query: 78 EHP 80
EHP
Sbjct: 140 EHP 142
>gi|225556197|gb|EEH04486.1| 50S ribosomal protein L13 [Ajellomyces capsulatus G186AR]
Length = 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE-- 87
G LK T+ + E+ E +RKAV MLP+N+LRD R +L++F G HP+ L+
Sbjct: 85 GSLKSMTMDKMFEKWGGGEVLRKAVSGMLPKNRLRDKRLARLKVFEGHAHPYKKNILKLA 144
Query: 88 -PYVMPPRRVRELRPRVRRAMIREQKKAEMQQ 118
V+ P P ++ A +E K AE
Sbjct: 145 GKSVLGPTNSIADSPLIKEAFAKE-KGAETGS 175
>gi|377574074|ref|ZP_09803108.1| 50S ribosomal protein L13 [Mobilicoccus pelagius NBRC 104925]
gi|377537225|dbj|GAB48273.1| 50S ribosomal protein L13 [Mobilicoccus pelagius NBRC 104925]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E +Y Y G L+ + E M ++PT A+ KA+ MLP+N
Sbjct: 53 YVIIINADKVALTGAKLEKKKAYHHSGYPGGLRATSYTELMAKNPTRAVEKAIRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G HP + EP+
Sbjct: 113 SLARQQLSKLKVYAGDTHPHQAQQPEPF 140
>gi|154272221|ref|XP_001536963.1| mitochondrial 54S ribosomal protein YmL23 [Ajellomyces capsulatus
NAm1]
gi|150408950|gb|EDN04406.1| ribosomal protein L13 [Ajellomyces capsulatus NAm1]
Length = 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE-- 87
G LK T+ + E+ E +RKAV MLP+N+LRD R +L++F G HP+ L+
Sbjct: 85 GSLKSMTMDKMFEKWGGGEVLRKAVSGMLPKNRLRDKRLARLKVFEGHAHPYKKNILKLA 144
Query: 88 -PYVMPPRRVRELRPRVRRAMIREQ 111
V+ P P ++ A +E+
Sbjct: 145 GKSVLGPTNSIADSPLIKEAFAKEK 169
>gi|346311373|ref|ZP_08853379.1| 50S ribosomal protein L13 [Collinsella tanakaei YIT 12063]
gi|345900989|gb|EGX70800.1| 50S ribosomal protein L13 [Collinsella tanakaei YIT 12063]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + + V YR Y G LK + ++ ME+ P + I +AV MLP+
Sbjct: 56 FVVVINADKVQLTGNKADTKVYYRHSGYNGGLKAESFRQAMEKHPEQVIERAVRGMLPKT 115
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + +KL+++ G+EHP
Sbjct: 116 TLGRQQLKKLKVYAGAEHP 134
>gi|326435500|gb|EGD81070.1| LSU ribosomal protein L13P [Salpingoeca sp. ATCC 50818]
Length = 195
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG------ 82
+ G +E T R PTE +RKAV MLP+N LR R L IF +HP+
Sbjct: 81 WPGGFREETAASLHARKPTEVVRKAVDGMLPKNNLRKQFMRHLHIFEDDQHPYDRNIYAV 140
Query: 83 -DRPLEPYVMPPR 94
D P EP +PP+
Sbjct: 141 LDGPQEP--VPPK 151
>gi|225020502|ref|ZP_03709694.1| hypothetical protein CORMATOL_00509 [Corynebacterium matruchotii
ATCC 33806]
gi|305679915|ref|ZP_07402725.1| ribosomal protein L13 [Corynebacterium matruchotii ATCC 14266]
gi|224946891|gb|EEG28100.1| hypothetical protein CORMATOL_00509 [Corynebacterium matruchotii
ATCC 33806]
gi|305660535|gb|EFM50032.1| ribosomal protein L13 [Corynebacterium matruchotii ATCC 14266]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E P I +++ M+P N+L +KL +F GSEHP+ + E
Sbjct: 80 YPGGLKVMTLGRSLELHPARVIEESIRGMMPHNRLSRASAKKLHVFAGSEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|197117302|ref|YP_002137729.1| 50S ribosomal protein L13 [Geobacter bemidjiensis Bem]
gi|226702863|sp|B5EFM9.1|RL13_GEOBB RecName: Full=50S ribosomal protein L13
gi|197086662|gb|ACH37933.1| ribosomal protein L13 [Geobacter bemidjiensis Bem]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+ S+ Y G LKE T + +++ P E ++KAV MLP+NKL +KL+I+ G
Sbjct: 69 LADKTYYSHSSYPGGLKEITAGKLLDKKPEELLKKAVKGMLPKNKLARHMLKKLKIYSGG 128
Query: 78 EHP 80
HP
Sbjct: 129 AHP 131
>gi|118602905|ref|YP_904120.1| 50S ribosomal protein L13 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166199614|sp|A1AXJ2.1|RL13_RUTMC RecName: Full=50S ribosomal protein L13
gi|118567844|gb|ABL02649.1| LSU ribosomal protein L13P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
Y+G+LK K+ + P E I K V MLP+ L D RK+++F GSEH G
Sbjct: 80 YVGNLKSIAFKDLQAKKPEEIINKVVKGMLPKGPLGRDMFRKMKVFAGSEHTHG 133
>gi|337290071|ref|YP_004629092.1| 50S ribosomal protein L13 [Corynebacterium ulcerans BR-AD22]
gi|384514993|ref|YP_005710085.1| 50S ribosomal protein L13 [Corynebacterium ulcerans 809]
gi|397653314|ref|YP_006493997.1| 50S ribosomal protein L13 [Corynebacterium ulcerans 0102]
gi|334696194|gb|AEG80991.1| 50S ribosomal protein L13 [Corynebacterium ulcerans 809]
gi|334698377|gb|AEG83173.1| 50S ribosomal protein L13 [Corynebacterium ulcerans BR-AD22]
gi|393402270|dbj|BAM26762.1| 50S ribosomal protein L13 [Corynebacterium ulcerans 0102]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + I S E + YR Y G LK TL +E P I +++ M+P N
Sbjct: 53 HVIVINADKVHISSNKREREMRYRHSGYPGGLKTMTLGRSLEVHPERVIEESIRGMMPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L +KL +F GSEHP+ + E Y
Sbjct: 113 RLSRASAKKLHVFAGSEHPYAAQKPETY 140
>gi|332669556|ref|YP_004452564.1| 50S ribosomal protein L13 [Cellulomonas fimi ATCC 484]
gi|332338594|gb|AEE45177.1| ribosomal protein L13 [Cellulomonas fimi ATCC 484]
Length = 149
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L+ E +E+ P AI KAV MLP++
Sbjct: 53 FVIVINADKVALTGNKRETKLAYRHSGYPGGLRATRYSELLEKHPERAIEKAVRGMLPKS 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G+EHP + +P+
Sbjct: 113 SLAAKQLGKLKVYAGAEHPHAAQQPKPF 140
>gi|254821785|ref|ZP_05226786.1| 50S ribosomal protein L13 [Mycobacterium intracellulare ATCC 13950]
gi|379748971|ref|YP_005339792.1| 50S ribosomal protein L13 [Mycobacterium intracellulare ATCC 13950]
gi|379763824|ref|YP_005350221.1| 50S ribosomal protein L13 [Mycobacterium intracellulare MOTT-64]
gi|387877642|ref|YP_006307946.1| 50S ribosomal protein L13 [Mycobacterium sp. MOTT36Y]
gi|406032515|ref|YP_006731407.1| 50S ribosomal protein L13 [Mycobacterium indicus pranii MTCC 9506]
gi|443307412|ref|ZP_21037199.1| 50S ribosomal protein L13 [Mycobacterium sp. H4Y]
gi|378801335|gb|AFC45471.1| 50S ribosomal protein L13 [Mycobacterium intracellulare ATCC 13950]
gi|378811766|gb|AFC55900.1| 50S ribosomal protein L13 [Mycobacterium intracellulare MOTT-64]
gi|386791100|gb|AFJ37219.1| 50S ribosomal protein L13 [Mycobacterium sp. MOTT36Y]
gi|405131062|gb|AFS16317.1| 50S ribosomal protein L13 [Mycobacterium indicus pranii MTCC 9506]
gi|442764780|gb|ELR82778.1| 50S ribosomal protein L13 [Mycobacterium sp. H4Y]
Length = 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
++YR Y G L RT++E M + P + A++ MLP+NKL RKL ++ G HP
Sbjct: 73 LAYRHSGYPGGLSSRTIRELMAKHPDRVVEDAIVGMLPKNKLARQIARKLHVYAGPTHPH 132
Query: 82 GDRPLEPY 89
+ PY
Sbjct: 133 VAQQPVPY 140
>gi|336469250|gb|EGO57412.1| hypothetical protein NEUTE1DRAFT_62260 [Neurospora tetrasperma FGSC
2508]
gi|350291117|gb|EGZ72331.1| ribosomal protein L13 [Neurospora tetrasperma FGSC 2509]
Length = 183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 71 YVVVTNCAGLYTTGHKKWRKTYYRHNTRPGSLQAITMDALMEKHGGAEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 131 NRLRDKRLARLKAFEGDAHPY 151
>gi|395779987|ref|ZP_10460455.1| 50S ribosomal protein L13 [Bartonella washoensis 085-0475]
gi|395419737|gb|EJF86033.1| 50S ribosomal protein L13 [Bartonella washoensis 085-0475]
Length = 154
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + R LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLRNLRVYAGSQHP 132
>gi|85109839|ref|XP_963113.1| mitochondrial 54S ribosomal protein YmL23 [Neurospora crassa OR74A]
gi|28924765|gb|EAA33877.1| hypothetical protein NCU07852 [Neurospora crassa OR74A]
Length = 183
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 71 YVVVTNCAGLYTTGHKKWRKTYYRHNTRPGSLQAITMDALMEKHGGAEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 131 NRLRDKRLARLKAFEGDAHPY 151
>gi|405118537|gb|AFR93311.1| mitochondrial ribosomal protein L23 [Cryptococcus neoformans var.
grubii H99]
Length = 163
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPG 76
++G LKE + ER P E IRKAV MLP+N RD R +L+IFPG
Sbjct: 81 FMGGLKEVPITRLRERRPEEIIRKAVSGMLPKNTFRDRRLERLKIFPG 128
>gi|441519239|ref|ZP_21000934.1| 50S ribosomal protein L13 [Gordonia hirsuta DSM 44140 = NBRC 16056]
gi|441453896|dbj|GAC58895.1| 50S ribosomal protein L13 [Gordonia hirsuta DSM 44140 = NBRC 16056]
Length = 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y + GH LK RT+ E + P + KAV MLP+NKL D KL+++ G HP
Sbjct: 75 YHHSGHPGGLKSRTVGEVLATRPDRLVEKAVKGMLPKNKLGDQIASKLKVYAGPNHPH 132
>gi|357022899|ref|ZP_09085120.1| 50S ribosomal protein L13 [Mycobacterium thermoresistibile ATCC
19527]
gi|356477233|gb|EHI10380.1| 50S ribosomal protein L13 [Mycobacterium thermoresistibile ATCC
19527]
Length = 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +S++ E + YR Y G L+ R+L + + R P + KA++ MLP+
Sbjct: 53 FVIIVNAEKVSMSGNKPERTFYYRHSGYPGGLRVRSLGDMLRRHPERVVEKAIVGMLPKT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KLR++ G +HP + PY
Sbjct: 113 KLGRQMKTKLRVYAGPDHPHAAQQPVPY 140
>gi|218282054|ref|ZP_03488359.1| hypothetical protein EUBIFOR_00930 [Eubacterium biforme DSM 3989]
gi|218216972|gb|EEC90510.1| hypothetical protein EUBIFOR_00930 [Eubacterium biforme DSM 3989]
Length = 145
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
LN E ++ Y G ++ RT KE E+ P E + +A+ MLP KL D + + ++ GS
Sbjct: 70 LNTEKYYNHSGYFGGMRVRTAKEMKEKYPVEWVERAIKGMLPHTKLGDVQRGHVFVYAGS 129
Query: 78 EHPF-GDRPLE 87
EHP +P+E
Sbjct: 130 EHPHAAQKPVE 140
>gi|309812399|ref|ZP_07706154.1| ribosomal protein L13 [Dermacoccus sp. Ellin185]
gi|308433704|gb|EFP57581.1| ribosomal protein L13 [Dermacoccus sp. Ellin185]
Length = 149
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR+ G L + E M +DP +A+ KAV MLP+
Sbjct: 55 FVIIINADKVALTGAKLEKKKAYRHSGFPGGLTSTSYTELMAKDPEKAVEKAVRGMLPKT 114
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + KL+++ G+EHP + +P+
Sbjct: 115 KLGRAQIAKLKVYRGAEHPHAAQQPKPF 142
>gi|257064886|ref|YP_003144558.1| 50S ribosomal protein L13P [Slackia heliotrinireducens DSM 20476]
gi|256792539|gb|ACV23209.1| LSU ribosomal protein L13P [Slackia heliotrinireducens DSM 20476]
Length = 145
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMSVS---YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + + + + YR+ GH LK+ T E ME+ P I AV MLP+N
Sbjct: 53 FVIIVNADKIKVTGTKAANKEYYRHSGHPGGLKKETFTEAMEKHPERVIEHAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G +HP
Sbjct: 113 TLGRKQGLKLKVYVGPDHP 131
>gi|121602570|ref|YP_989186.1| 50S ribosomal protein L13 [Bartonella bacilliformis KC583]
gi|421760995|ref|ZP_16197801.1| 50S ribosomal protein L13 [Bartonella bacilliformis INS]
gi|166230962|sp|A1UT83.1|RL13_BARBK RecName: Full=50S ribosomal protein L13
gi|120614747|gb|ABM45348.1| ribosomal protein L13 [Bartonella bacilliformis KC583]
gi|411173599|gb|EKS43642.1| 50S ribosomal protein L13 [Bartonella bacilliformis INS]
Length = 154
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + R LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERIIEKAVERMIPRGPLGRRQMRNLRVYAGSQHP 132
>gi|227487059|ref|ZP_03917375.1| 50S ribosomal protein L13 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541778|ref|ZP_03971827.1| 50S ribosomal protein L13 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227093133|gb|EEI28445.1| 50S ribosomal protein L13 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182484|gb|EEI63456.1| 50S ribosomal protein L13 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK+ TL +E P I +A+ M+P +L +KLR++ G+EHP+ D+ E
Sbjct: 80 YPGGLKKLTLGRSLELHPERVIFEAIEGMMPHTRLSRASIKKLRVYAGAEHPYADKNPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|325921900|ref|ZP_08183711.1| LSU ribosomal protein L13P [Xanthomonas gardneri ATCC 19865]
gi|325547602|gb|EGD18645.1| LSU ribosomal protein L13P [Xanthomonas gardneri ATCC 19865]
Length = 142
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L++ ++R P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLEQALQRHPERVIEIAVKGMLPKGPLGRTMYRKLKVYSGAEHP 131
>gi|296821348|ref|XP_002850094.1| mitochondrial 54S ribosomal protein YmL23 [Arthroderma otae CBS
113480]
gi|238837648|gb|EEQ27310.1| 54S ribosomal protein L23 [Arthroderma otae CBS 113480]
Length = 170
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV RN+ + Y + G LK ++ + +E+ E +RKAV MLP+
Sbjct: 56 YVVALGCRNVHTTGKKRAQKLYYTHNTRPGSLKSMSMDQMIEKWGGAEVLRKAVKGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR+ R +L+ F G EHP+
Sbjct: 116 NRLREKRMARLKAFEGLEHPY 136
>gi|406996933|gb|EKE15142.1| Ribosomal protein L13 [uncultured bacterium]
Length = 155
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 18 SLNDEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
+L+ E + Y G L++ + +++D E I++AV ML +NK R DR ++ +FP +
Sbjct: 85 ALSKEYTNYSGYPGGLRKINFADLLKKDSREIIKRAVSGMLAKNKFRSDRLNRVNVFPNA 144
Query: 78 EHPFGDR 84
EH + D+
Sbjct: 145 EHSYKDK 151
>gi|326470634|gb|EGD94643.1| 50S ribosomal protein L13 [Trichophyton tonsurans CBS 112818]
gi|326479551|gb|EGE03561.1| 54S ribosomal protein L23 [Trichophyton equinum CBS 127.97]
Length = 170
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV RNL + Y + G LK ++ + +E+ E +RKAV MLP+
Sbjct: 56 YVVALGCRNLRTTGKKRAQKLYYTHNTRPGSLKSMSMDQMIEKWGGAEVLRKAVKGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR+ R +L+ F G EHP+
Sbjct: 116 NRLREKRMARLKAFEGLEHPY 136
>gi|429762539|ref|ZP_19294928.1| ribosomal protein L13 [Anaerostipes hadrus DSM 3319]
gi|429181529|gb|EKY22688.1| ribosomal protein L13 [Anaerostipes hadrus DSM 3319]
Length = 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE+TLKE++ + P + I AV MLP+ L +KL ++ G+EH
Sbjct: 80 YVGGMKEQTLKEKLAKKPEDVIYLAVKGMLPKGPLGRQMIKKLHVYAGAEH 130
>gi|34558418|ref|NP_908233.1| 50S ribosomal protein L13 [Wolinella succinogenes DSM 1740]
gi|81707332|sp|Q7M7R0.1|RL13_WOLSU RecName: Full=50S ribosomal protein L13
gi|34484137|emb|CAE11133.1| 50S RIBOSOMAL PROTEIN L13 [Wolinella succinogenes]
Length = 139
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TL+E +E++P + R A MLP+ KL +KL+++ G+EHP
Sbjct: 81 YFGSTKSQTLQELLEKNPEKLFRLAARGMLPKTKLGRAMLKKLKVYAGAEHP 132
>gi|336271311|ref|XP_003350414.1| mitochondrial 54S ribosomal protein YmL23 [Sordaria macrospora
k-hell]
gi|380090936|emb|CCC11469.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 183
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 71 YVVVTNCAGLYTTGHKKWRKTYYRHNTRPGSLQAITMDALMEKHGGAEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 131 NRLRDKRLARLKAFEGDAHPY 151
>gi|282855147|ref|ZP_06264479.1| ribosomal protein L13 [Propionibacterium acnes J139]
gi|386070005|ref|YP_005984901.1| 50S ribosomal protein L13 [Propionibacterium acnes ATCC 11828]
gi|282581735|gb|EFB87120.1| ribosomal protein L13 [Propionibacterium acnes J139]
gi|353454372|gb|AER04891.1| 50S ribosomal protein L13 [Propionibacterium acnes ATCC 11828]
Length = 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ + + ++P A+ +AV M+P+N
Sbjct: 53 FVVVINASKIALTGKKATDSLRYDHSGRPGGLRVTSIGKMLAKNPRRAVERAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 113 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 140
>gi|167767769|ref|ZP_02439822.1| hypothetical protein CLOSS21_02304 [Clostridium sp. SS2/1]
gi|317497060|ref|ZP_07955387.1| ribosomal protein L13 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710508|gb|EDS21087.1| ribosomal protein L13 [Clostridium sp. SS2/1]
gi|291558890|emb|CBL37690.1| LSU ribosomal protein L13P [butyrate-producing bacterium SSC/2]
gi|316895605|gb|EFV17760.1| ribosomal protein L13 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE+TLKE++ + P + I AV MLP+ L +KL ++ G+EH
Sbjct: 80 YVGGMKEQTLKEKLAKKPEDVIYLAVKGMLPKGPLGRQMIKKLHVYAGAEH 130
>gi|443625102|ref|ZP_21109553.1| putative 50S ribosomal protein L13 [Streptomyces viridochromogenes
Tue57]
gi|443341365|gb|ELS55556.1| putative 50S ribosomal protein L13 [Streptomyces viridochromogenes
Tue57]
Length = 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +AI KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAIEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +PY
Sbjct: 113 SLGRQMLSKLKVYKGDQHPHGAQQPQPY 140
>gi|317489567|ref|ZP_07948072.1| ribosomal protein L13 [Eggerthella sp. 1_3_56FAA]
gi|325830260|ref|ZP_08163717.1| ribosomal protein L13 [Eggerthella sp. HGA1]
gi|316911299|gb|EFV32903.1| ribosomal protein L13 [Eggerthella sp. 1_3_56FAA]
gi|325487727|gb|EGC90165.1| ribosomal protein L13 [Eggerthella sp. HGA1]
Length = 144
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + + YR+ G LK T +E M + P I AV MLP+N
Sbjct: 53 FVVIINADKIRVTGTKAQTKSYYRHSGFPGGLKSETFEEAMAKHPERVIEHAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 TLGRAMGKKLKVYTGAEHP 131
>gi|258543526|ref|YP_003188959.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-01]
gi|329113240|ref|ZP_08242023.1| 50S ribosomal protein L13 [Acetobacter pomorum DM001]
gi|384043444|ref|YP_005482188.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-12]
gi|384051961|ref|YP_005479024.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-03]
gi|384055070|ref|YP_005488164.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-07]
gi|384058303|ref|YP_005490970.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-22]
gi|384060944|ref|YP_005500072.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-26]
gi|384064236|ref|YP_005484878.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO 3283-32]
gi|384120249|ref|YP_005502873.1| 50S ribosomal protein L13 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256634604|dbj|BAI00580.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-01]
gi|256637660|dbj|BAI03629.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-03]
gi|256640714|dbj|BAI06676.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-07]
gi|256643769|dbj|BAI09724.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-22]
gi|256646824|dbj|BAI12772.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-26]
gi|256649877|dbj|BAI15818.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-32]
gi|256652867|dbj|BAI18801.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655921|dbj|BAI21848.1| LSU ribosomal protein L13P [Acetobacter pasteurianus IFO 3283-12]
gi|326697381|gb|EGE49039.1| 50S ribosomal protein L13 [Acetobacter pomorum DM001]
Length = 158
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+K+++E ++P + + KAV RM+ R L+ + R L ++ G+EHP G P
Sbjct: 81 YPGGIKERTVKQRLEGKNPGQLVEKAVERMITRGPLQRQQMRSLHVYAGAEHPHAGQNP 139
>gi|402835292|ref|ZP_10883863.1| ribosomal protein L13 [Mogibacterium sp. CM50]
gi|402275254|gb|EJU24412.1| ribosomal protein L13 [Mogibacterium sp. CM50]
Length = 142
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE TL E + P E IR AV M+P+ KL +KL+++ G EHP
Sbjct: 80 YPGGLKETTLAELRAKKPEEIIRHAVKGMMPKGKLGRQMFKKLKVYAGPEHP 131
>gi|21229953|ref|NP_635870.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21241260|ref|NP_640842.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. citri str.
306]
gi|66766829|ref|YP_241591.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78046079|ref|YP_362254.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|188989902|ref|YP_001901912.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris
str. B100]
gi|289663858|ref|ZP_06485439.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289669446|ref|ZP_06490521.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. musacearum
NCPPB 4381]
gi|294627243|ref|ZP_06705830.1| 50S ribosomal protein L13 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294667721|ref|ZP_06732933.1| 50S ribosomal protein L13 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325915219|ref|ZP_08177542.1| LSU ribosomal protein L13P [Xanthomonas vesicatoria ATCC 35937]
gi|325927764|ref|ZP_08188992.1| LSU ribosomal protein L13P [Xanthomonas perforans 91-118]
gi|346723418|ref|YP_004850087.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. citrumelo F1]
gi|381170098|ref|ZP_09879258.1| ribosomal protein L13 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|384421082|ref|YP_005630442.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|384429650|ref|YP_005639011.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. raphani 756C]
gi|390990756|ref|ZP_10261036.1| ribosomal protein L13 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418517230|ref|ZP_13083396.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418520294|ref|ZP_13086344.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|81307182|sp|Q4UZF2.1|RL13_XANC8 RecName: Full=50S ribosomal protein L13
gi|81754763|sp|Q7CLV7.1|RL13_XANCP RecName: Full=50S ribosomal protein L13
gi|81792145|sp|Q8NL21.1|RL13_XANAC RecName: Full=50S ribosomal protein L13
gi|118573465|sp|Q3BYA9.1|RL13_XANC5 RecName: Full=50S ribosomal protein L13
gi|226705053|sp|B0RN05.1|RL13_XANCB RecName: Full=50S ribosomal protein L13
gi|21106576|gb|AAM35378.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. citri str.
306]
gi|21111465|gb|AAM39794.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66572161|gb|AAY47571.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78034509|emb|CAJ22154.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|167731662|emb|CAP49840.1| 50S ribosomal protein L13 [Xanthomonas campestris pv. campestris]
gi|292598482|gb|EFF42632.1| 50S ribosomal protein L13 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292602561|gb|EFF46000.1| 50S ribosomal protein L13 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325538579|gb|EGD10252.1| LSU ribosomal protein L13P [Xanthomonas vesicatoria ATCC 35937]
gi|325541965|gb|EGD13479.1| LSU ribosomal protein L13P [Xanthomonas perforans 91-118]
gi|341938754|gb|AEL08893.1| ribosomal protein L13 [Xanthomonas campestris pv. raphani 756C]
gi|346648165|gb|AEO40789.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. citrumelo F1]
gi|353463995|gb|AEQ98274.1| ribosomal protein L13 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|372554493|emb|CCF68011.1| ribosomal protein L13 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|380689378|emb|CCG35745.1| ribosomal protein L13 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|410704248|gb|EKQ62733.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410706130|gb|EKQ64594.1| 50S ribosomal protein L13 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 142
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L++ ++R P I AV MLP+ L RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLEQALQRHPERVIEIAVKGMLPKGPLGRTMYRKLKVYSGAEHP 131
>gi|410867037|ref|YP_006981648.1| 50S ribosomal protein L13 [Propionibacterium acidipropionici ATCC
4875]
gi|410823678|gb|AFV90293.1| 50S ribosomal protein L13 [Propionibacterium acidipropionici ATCC
4875]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G L+ T+ E + ++P A+ +AV M+P+NKL + KL+++ G EHP + +P+
Sbjct: 82 GGLRTTTIGELLAKNPRRAVERAVWGMMPKNKLSRQQMSKLKVYGGPEHPHAAQKPQPF 140
>gi|410658498|ref|YP_006910869.1| LSU ribosomal protein L13p (L13Ae) [Dehalobacter sp. DCA]
gi|410661485|ref|YP_006913856.1| LSU ribosomal protein L13p (L13Ae) [Dehalobacter sp. CF]
gi|409020853|gb|AFV02884.1| LSU ribosomal protein L13p (L13Ae) [Dehalobacter sp. DCA]
gi|409023841|gb|AFV05871.1| LSU ribosomal protein L13p (L13Ae) [Dehalobacter sp. CF]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LKE T + M + P +A+ AV MLP NKL +KL+++ G EHP + E
Sbjct: 81 YPGGLKEMTYRVLMSKAPEKAMEHAVKGMLPHNKLGAQMYKKLKVYSGPEHPHQAQKAEV 140
Query: 89 YVM 91
+ M
Sbjct: 141 WNM 143
>gi|162211270|ref|YP_577705.2| 50S ribosomal protein L13 [Nitrobacter hamburgensis X14]
Length = 154
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT K +E R P I KAV RM+PR L + LR++ G+EHP
Sbjct: 80 YIGGIKERTAKSILEGRFPERVIEKAVERMIPRGPLGRVQLGNLRVYGGAEHP 132
>gi|302508837|ref|XP_003016379.1| hypothetical protein ARB_05778 [Arthroderma benhamiae CBS 112371]
gi|302659399|ref|XP_003021390.1| hypothetical protein TRV_04464 [Trichophyton verrucosum HKI 0517]
gi|291179948|gb|EFE35734.1| hypothetical protein ARB_05778 [Arthroderma benhamiae CBS 112371]
gi|291185287|gb|EFE40772.1| hypothetical protein TRV_04464 [Trichophyton verrucosum HKI 0517]
Length = 134
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV RNL + Y + G LK ++ + +E+ E +RKAV MLP+
Sbjct: 20 YVVALGCRNLRTTGKKRAQKLYYTHNTRPGSLKSMSMDQMIEKWGGAEVLRKAVKGMLPK 79
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR+ R +L+ F G EHP+
Sbjct: 80 NRLREKRMARLKAFEGLEHPY 100
>gi|389580695|ref|ZP_10170722.1| ribosomal protein L13, bacterial type [Desulfobacter postgatei
2ac9]
gi|389402330|gb|EIM64552.1| ribosomal protein L13, bacterial type [Desulfobacter postgatei
2ac9]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K +T KE + + P + + KAV MLP+N+L +KL ++ G +HP
Sbjct: 82 YIGGIKAQTAKEMLGKKPEDVLIKAVRGMLPKNRLGRKLGKKLFVYAGDQHP 133
>gi|357401201|ref|YP_004913126.1| 50S ribosomal protein L13 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386357266|ref|YP_006055512.1| 50S ribosomal protein L13 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337767610|emb|CCB76321.1| ribosomal protein L13 [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807774|gb|AEW95990.1| 50S ribosomal protein L13 [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E +E++P +A+ KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLEKNPEKAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G+EHP G + P+
Sbjct: 113 TLGRQMLSKLKVYAGAEHPHGAQQPVPF 140
>gi|297587853|ref|ZP_06946497.1| 50S ribosomal protein L13 [Finegoldia magna ATCC 53516]
gi|297574542|gb|EFH93262.1| 50S ribosomal protein L13 [Finegoldia magna ATCC 53516]
Length = 143
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK T K+ M +DP A+ A++ MLP N L +KLR++ G++H
Sbjct: 80 YAGGLKSITYKDLMNKDPERAVTHAIVGMLPHNSLGRQMAKKLRVYRGADH 130
>gi|421849968|ref|ZP_16282939.1| LSU ribosomal protein L13P [Acetobacter pasteurianus NBRC 101655]
gi|421852836|ref|ZP_16285520.1| LSU ribosomal protein L13P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371459277|dbj|GAB28142.1| LSU ribosomal protein L13P [Acetobacter pasteurianus NBRC 101655]
gi|371478996|dbj|GAB30723.1| LSU ribosomal protein L13P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+K+++E ++P + + KAV RM+ R L+ + R L ++ G+EHP G P
Sbjct: 70 YPGGIKERTVKQRLEGKNPGQLVEKAVERMITRGPLQRQQMRSLHVYAGAEHPHAGQNP 128
>gi|340500527|gb|EGR27396.1| hypothetical protein IMG5_196660 [Ichthyophthirius multifiliis]
Length = 329
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
Y+G +KER+ K + + P + I + +MLP+NK R D +K+RIF G +H + P
Sbjct: 106 YVGGIKERSYKHYLTQKPEQLIYYCISKMLPKNKKRRDLLQKIRIFRGLQHDHKEFP 162
>gi|327307900|ref|XP_003238641.1| mitochondrial 54S ribosomal protein YmL23 [Trichophyton rubrum CBS
118892]
gi|326458897|gb|EGD84350.1| 50S ribosomal protein L13 [Trichophyton rubrum CBS 118892]
Length = 170
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV RNL + Y + G LK ++ + +E+ E +RKAV MLP+
Sbjct: 56 YVVALGCRNLRTTGKKRAQKLYYTHNTRPGSLKSMSMDQMIEKWGGAEVLRKAVKGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR+ R +L+ F G EHP+
Sbjct: 116 NRLREKRMARLKAFEGFEHPY 136
>gi|383639939|ref|ZP_09952345.1| 50S ribosomal protein L13 [Streptomyces chartreusis NRRL 12338]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +AI KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAIEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +PY
Sbjct: 113 TLGRQMLSKLKVYKGDQHPHGAQQPQPY 140
>gi|333921704|ref|YP_004495285.1| 50S ribosomal protein L13 [Amycolicicoccus subflavus DQS3-9A1]
gi|333483925|gb|AEF42485.1| 50S ribosomal protein L13 [Amycolicicoccus subflavus DQS3-9A1]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK RTL E ++ P + +AV M+P NKL + +KL+++ G +HP G
Sbjct: 82 GGLKSRTLGEALDTRPDRLVEQAVYGMIPHNKLGREVRKKLKVYAGPDHPHG 133
>gi|313673960|ref|YP_004052071.1| 50S ribosomal protein L13 [Calditerrivibrio nitroreducens DSM
19672]
gi|312940716|gb|ADR19908.1| LSU ribosomal protein L13P [Calditerrivibrio nitroreducens DSM
19672]
Length = 141
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKERTL++ ++ P E I AV +MLP+N+L +KL+++ +HP
Sbjct: 79 YFGGLKERTLEKMLQEKPEEVIYLAVKKMLPKNRLGRKMIKKLKVYTTPDHP 130
>gi|91800870|gb|ABE63245.1| LSU ribosomal protein L13P [Nitrobacter hamburgensis X14]
Length = 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT K +E R P I KAV RM+PR L + LR++ G+EHP
Sbjct: 103 YIGGIKERTAKSILEGRFPERVIEKAVERMIPRGPLGRVQLGNLRVYGGAEHP 155
>gi|358399394|gb|EHK48737.1| hypothetical protein TRIATDRAFT_298101 [Trichoderma atroviride IMI
206040]
Length = 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 27 YRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
YR+ G LK T+ ME+ +E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 89 YRHTTRPGSLKTVTMDVLMEKHGGSEVLRKAVSGMLPKNRLRDKRLARLKAFEGGAHPY 147
>gi|433457645|ref|ZP_20415628.1| 50S ribosomal protein L13 [Arthrobacter crystallopoietes BAB-32]
gi|432194537|gb|ELK51151.1| 50S ribosomal protein L13 [Arthrobacter crystallopoietes BAB-32]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L + E +E++P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLSSVSYAELLEKNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G EHP
Sbjct: 113 SLAAQQLTKLKVYAGPEHP 131
>gi|406961791|gb|EKD88388.1| hypothetical protein ACD_34C00571G0003 [uncultured bacterium]
Length = 142
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK LKEQM P I AV MLP N++ ++L+++ GSEHP
Sbjct: 81 YPGGLKTVGLKEQMRVHPDRVITAAVWGMLPHNRMGRSIFKRLKVYAGSEHP 132
>gi|345850518|ref|ZP_08803513.1| 50S ribosomal protein L13 [Streptomyces zinciresistens K42]
gi|345637999|gb|EGX59511.1| 50S ribosomal protein L13 [Streptomyces zinciresistens K42]
Length = 147
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +AI KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAIEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +PY
Sbjct: 113 TLGRQMLSKLKVYKGDQHPHGAQQPQPY 140
>gi|167756118|ref|ZP_02428245.1| hypothetical protein CLORAM_01638 [Clostridium ramosum DSM 1402]
gi|237734103|ref|ZP_04564584.1| 50S ribosomal protein L13 [Mollicutes bacterium D7]
gi|365832873|ref|ZP_09374400.1| ribosomal protein L13 [Coprobacillus sp. 3_3_56FAA]
gi|374624311|ref|ZP_09696728.1| ribosomal protein L13 [Coprobacillus sp. 8_2_54BFAA]
gi|167704110|gb|EDS18689.1| ribosomal protein L13 [Clostridium ramosum DSM 1402]
gi|229382929|gb|EEO33020.1| 50S ribosomal protein L13 [Coprobacillus sp. D7]
gi|365260003|gb|EHM89978.1| ribosomal protein L13 [Coprobacillus sp. 3_3_56FAA]
gi|373915594|gb|EHQ47342.1| ribosomal protein L13 [Coprobacillus sp. 8_2_54BFAA]
Length = 145
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++G LK +T ++ E++PT + AV MLP N L + KL ++ GSEHP
Sbjct: 81 WLGGLKVKTARQFKEQNPTGWVEAAVKGMLPHNTLGRKQGMKLFVYAGSEHP 132
>gi|84494733|ref|ZP_00993852.1| 50S ribosomal protein L13 [Janibacter sp. HTCC2649]
gi|84384226|gb|EAQ00106.1| 50S ribosomal protein L13 [Janibacter sp. HTCC2649]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + E +YR+ G L+ R E +E+ P +A+ KAV MLPR
Sbjct: 53 FVIIINAEKVALTGAKAEQKRAYRHSGFPGGLRSRNYVEMLEKYPEKAVEKAVRGMLPRT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G+EHP + +P+
Sbjct: 113 TLGRQQLTKLKVYAGAEHPHAAQQPKPF 140
>gi|310659466|ref|YP_003937187.1| 50S ribosomal subunit protein L13 [[Clostridium] sticklandii]
gi|308826244|emb|CBH22282.1| 50S ribosomal subunit protein L13 [[Clostridium] sticklandii]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
YIG++KE ++ + P E I+ +V MLP+NKLR ++LR+F G+EH + +E
Sbjct: 80 YIGNMKETNFRKLQQEKPEEIIKLSVRGMLPKNKLRAPMMKRLRLFVGNEHTHAAQSVE 138
>gi|395765035|ref|ZP_10445652.1| 50S ribosomal protein L13 [Bartonella sp. DB5-6]
gi|395790098|ref|ZP_10469600.1| 50S ribosomal protein L13 [Bartonella taylorii 8TBB]
gi|395413297|gb|EJF79772.1| 50S ribosomal protein L13 [Bartonella sp. DB5-6]
gi|395427373|gb|EJF93470.1| 50S ribosomal protein L13 [Bartonella taylorii 8TBB]
Length = 154
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERVIEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|363542698|ref|ZP_09312281.1| 50S ribosomal protein L13 [Mycoplasma ovipneumoniae SC01]
Length = 145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 6 VVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
++ + + + ++ + YR Y G LK RT +E + P I KAV MLP K
Sbjct: 55 IIIINAEKILLTAKKEDQKLYYRHSGYPGGLKVRTARELRAKKPIALIEKAVYGMLPHTK 114
Query: 63 LRDDRDRKLRIFPGSEHPF-GDRP 85
L D + + L ++ G+EHP G P
Sbjct: 115 LGDKQRKNLYVYAGTEHPHQGQNP 138
>gi|344201159|ref|YP_004785485.1| 50S ribosomal protein L13 [Acidithiobacillus ferrivorans SS3]
gi|343776603|gb|AEM49159.1| ribosomal protein L13 [Acidithiobacillus ferrivorans SS3]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LK + ++ ME P I AV MLP+N L +KL+++ GSEHP + +P
Sbjct: 80 YVGNLKSASFEKMMETHPERIIELAVKGMLPKNPLGRAMFKKLKVYTGSEHPHSAQQPQP 139
>gi|389776433|ref|ZP_10193922.1| 50S ribosomal protein L13 [Rhodanobacter spathiphylli B39]
gi|388436583|gb|EIL93439.1| 50S ribosomal protein L13 [Rhodanobacter spathiphylli B39]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V + + + L+D+M + Y+G+LK +LK+ + P I AV MLP+N
Sbjct: 53 YIVVINAQKVHVTGAKLDDKMYHRFTGYVGNLKTTSLKDLLATYPERVIEIAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + RKL+++ G+EHP
Sbjct: 113 PLGREMYRKLKVYGGAEHP 131
>gi|222056724|ref|YP_002539086.1| 50S ribosomal protein L13 [Geobacter daltonii FRC-32]
gi|221566013|gb|ACM21985.1| ribosomal protein L13 [Geobacter daltonii FRC-32]
Length = 143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LKE + + +E+ P + I+KAV MLP+NKL +KL+I+ G++HP
Sbjct: 83 GGLKEISAGKLLEKKPEDLIKKAVKGMLPKNKLARHMIKKLKIYTGTDHP 132
>gi|285017110|ref|YP_003374821.1| 50S ribosomal protein L13 [Xanthomonas albilineans GPE PC73]
gi|283472328|emb|CBA14834.1| probable 50s ribosomal protein l13 [Xanthomonas albilineans GPE
PC73]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L++ +ER P I AV MLP+ L RKL+++ G++HP
Sbjct: 80 YIGNLKTESLEQALERHPERVIEIAVKGMLPKGPLGRAMYRKLKVYSGAQHP 131
>gi|332798240|ref|YP_004459739.1| 50S ribosomal protein L13 [Tepidanaerobacter acetatoxydans Re1]
gi|438001158|ref|YP_007270901.1| LSU ribosomal protein L13p (L13Ae) [Tepidanaerobacter acetatoxydans
Re1]
gi|332695975|gb|AEE90432.1| ribosomal protein L13 [Tepidanaerobacter acetatoxydans Re1]
gi|432177952|emb|CCP24925.1| LSU ribosomal protein L13p (L13Ae) [Tepidanaerobacter acetatoxydans
Re1]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
++++M S+ Y G +K + + M + P + + KAV MLP N L +KL+I+ G+
Sbjct: 69 MDNKMYYSHTGYPGGIKSQNFRSLMSKSPEKVVYKAVWGMLPHNALGRKMIKKLKIYAGA 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|389844087|ref|YP_006346167.1| 50S ribosomal protein L13 [Mesotoga prima MesG1.Ag.4.2]
gi|387858833|gb|AFK06924.1| ribosomal protein L13, bacterial type [Mesotoga prima MesG1.Ag.4.2]
Length = 174
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YRY G+ +KERT ++ ME+ P +R AV RMLP+ L + +KL+++ G EH
Sbjct: 105 YRYSGYPGGIKERTARQMMEKFPDRVVRLAVKRMLPKKALGEKMLKKLKVYAGPEH 160
>gi|423711395|ref|ZP_17685715.1| 50S ribosomal protein L13 [Bartonella washoensis Sb944nv]
gi|395415309|gb|EJF81744.1| 50S ribosomal protein L13 [Bartonella washoensis Sb944nv]
Length = 154
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + R LR++ GS+HP
Sbjct: 80 YIGGIKERTARKILEGRFPERVVEKAVERMIPRGPLGRRQLRNLRVYAGSQHP 132
>gi|422467572|ref|ZP_16544124.1| ribosomal protein L13 [Propionibacterium acnes HL110PA4]
gi|422469016|ref|ZP_16545546.1| ribosomal protein L13 [Propionibacterium acnes HL110PA3]
gi|314982240|gb|EFT26333.1| ribosomal protein L13 [Propionibacterium acnes HL110PA3]
gi|315090500|gb|EFT62476.1| ribosomal protein L13 [Propionibacterium acnes HL110PA4]
Length = 161
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ + + ++P A+ +AV M+P+N
Sbjct: 67 FVVVINASKIALTGKKATDSLRYDHSGRPGGLRVTSIGKMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPEHPHAAQNPQPY 154
>gi|238916298|ref|YP_002929815.1| 50S ribosomal protein L13 [Eubacterium eligens ATCC 27750]
gi|259645553|sp|C4Z2W3.1|RL13_EUBE2 RecName: Full=50S ribosomal protein L13
gi|238871658|gb|ACR71368.1| large subunit ribosomal protein L13 [Eubacterium eligens ATCC
27750]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE TLKE ME+ P + I AV MLP+ L KL ++ G +H
Sbjct: 80 YVGGLKETTLKEMMEKKPEKVIELAVKGMLPKGPLGRQMFTKLHVYAGPDH 130
>gi|319405638|emb|CBI79261.1| 50S ribosomal protein L13 [Bartonella sp. AR 15-3]
Length = 154
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ G+EHP
Sbjct: 80 YIGGIKERTARQILEGRFPERVIEKAVERMIPRGPLGRRQMKNLRVYAGNEHP 132
>gi|237744052|ref|ZP_04574533.1| LSU ribosomal protein L13P [Fusobacterium sp. 7_1]
gi|423137159|ref|ZP_17124802.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. animalis
F0419]
gi|229431281|gb|EEO41493.1| LSU ribosomal protein L13P [Fusobacterium sp. 7_1]
gi|371960635|gb|EHO78286.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. animalis
F0419]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV L + L D++ ++ Y G ++ R L E +E+ P E + AV RMLP+N
Sbjct: 55 YVVVTNASKLVVTGKKLTDKVYYNHSGYPGGIRARKLGEILEKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|385800536|ref|YP_005836940.1| 50S ribosomal protein L13 [Halanaerobium praevalens DSM 2228]
gi|309389900|gb|ADO77780.1| LSU ribosomal protein L13P [Halanaerobium praevalens DSM 2228]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE T +E ++DP I KAV MLP NKL +KL+++ GS HP
Sbjct: 80 YPGGIKEVTYRELRDKDPEFIIEKAVKGMLPHNKLGRQMIKKLKVYSGSNHP 131
>gi|254556055|ref|YP_003062472.1| 50S ribosomal protein L13 [Lactobacillus plantarum JDM1]
gi|308180049|ref|YP_003924177.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380032006|ref|YP_004888997.1| 50S ribosomal protein L13 [Lactobacillus plantarum WCFS1]
gi|392948177|ref|ZP_10313792.1| LSU ribosomal protein L13p (L13Ae) [Lactobacillus pentosus KCA1]
gi|418274637|ref|ZP_12890135.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|81733727|sp|Q88XU8.1|RL13_LACPL RecName: Full=50S ribosomal protein L13
gi|254044982|gb|ACT61775.1| 50S ribosomal protein L13 [Lactobacillus plantarum JDM1]
gi|308045540|gb|ADN98083.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|342241249|emb|CCC78483.1| 50S ribosomal protein L13 [Lactobacillus plantarum WCFS1]
gi|376010203|gb|EHS83529.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|392436622|gb|EIW14531.1| LSU ribosomal protein L13p (L13Ae) [Lactobacillus pentosus KCA1]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKERT + + ++PT+ I +V MLP N L KL ++ G+EH
Sbjct: 81 YAGGLKERTAGDFLAKEPTKLIETSVKGMLPHNSLGHKMGLKLHVYAGAEH 131
>gi|345864217|ref|ZP_08816421.1| 50S ribosomal protein L13 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124748|gb|EGW54624.1| 50S ribosomal protein L13 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + YIG+LK +L++ +++ P AI AV M+P+N L +KLR+F G
Sbjct: 69 LKDKMYHHHTGYIGNLKSISLEKLLQKVPERAIEHAVKGMMPKNTLGRAMFKKLRVFAGP 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|401888047|gb|EJT52015.1| ribosomal protein L23 [Trichosporon asahii var. asahii CBS 2479]
Length = 324
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPG 76
+IG LKE + ER P E +R+AV MLP+N RD R +L+IFPG
Sbjct: 255 FIGGLKEVPITRMRERRPEEILRRAVSGMLPKNTFRDRRLERLKIFPG 302
>gi|300782657|ref|YP_003762948.1| 50S ribosomal protein L13 [Amycolatopsis mediterranei U32]
gi|384145874|ref|YP_005528690.1| 50S ribosomal protein L13 [Amycolatopsis mediterranei S699]
gi|399534543|ref|YP_006547205.1| 50S ribosomal protein L13 [Amycolatopsis mediterranei S699]
gi|299792171|gb|ADJ42546.1| large subunit ribosomal protein L13 [Amycolatopsis mediterranei
U32]
gi|340524028|gb|AEK39233.1| 50S ribosomal protein L13 [Amycolatopsis mediterranei S699]
gi|398315313|gb|AFO74260.1| 50S ribosomal protein L13 [Amycolatopsis mediterranei S699]
Length = 150
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNAEKVALTGNKREQKFAYRHSGYPGGLRKRSFGELLDTKPEHLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ G +HP
Sbjct: 113 KLGRAQAKKLKVYAGPQHP 131
>gi|340749591|ref|ZP_08686444.1| 50S ribosomal protein L13 [Fusobacterium mortiferum ATCC 9817]
gi|229421422|gb|EEO36469.1| 50S ribosomal protein L13 [Fusobacterium mortiferum ATCC 9817]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRYIGH------LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N+ L + + +Y H ++ER L E +E+ P E + AV RMLP+N
Sbjct: 55 FVVVTNVEKLVVTGKKLTDKKYYNHSGFPGGIRERKLGEILEKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEHA 133
>gi|257790120|ref|YP_003180726.1| 50S ribosomal protein L13 [Eggerthella lenta DSM 2243]
gi|257474017|gb|ACV54337.1| ribosomal protein L13 [Eggerthella lenta DSM 2243]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + + YR+ G LK T +E M + P I AV MLP+N
Sbjct: 53 FVVIINADKIRVTGTKAQSKSYYRHSGFPGGLKSETFEEAMAKHPERVIEHAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 TLGRAMGKKLKVYTGAEHP 131
>gi|448820635|ref|YP_007413797.1| 50S ribosomal protein L13 [Lactobacillus plantarum ZJ316]
gi|448274132|gb|AGE38651.1| 50S ribosomal protein L13 [Lactobacillus plantarum ZJ316]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKERT + + ++PT+ I +V MLP N L KL ++ G+EH
Sbjct: 76 YAGGLKERTAGDFLAKEPTKLIETSVKGMLPHNSLGHKMGLKLHVYAGAEH 126
>gi|300767858|ref|ZP_07077768.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494843|gb|EFK30001.1| 50S ribosomal protein L13 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|334882635|emb|CCB83677.1| 50S ribosomal protein L13 [Lactobacillus pentosus MP-10]
gi|339637262|emb|CCC16158.1| 50S ribosomal protein L13 [Lactobacillus pentosus IG1]
Length = 152
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKERT + + ++PT+ I +V MLP N L KL ++ G+EH
Sbjct: 86 YAGGLKERTAGDFLAKEPTKLIETSVKGMLPHNSLGHKMGLKLHVYAGAEH 136
>gi|255282099|ref|ZP_05346654.1| ribosomal protein L13 [Bryantella formatexigens DSM 14469]
gi|255267418|gb|EET60623.1| ribosomal protein L13 [Marvinbryantia formatexigens DSM 14469]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ +N+ + + V YR Y+G +KE TL+E + + P I AV MLP+
Sbjct: 53 YVIIVNAQNIKVTGKKLDQKVYYRHSEYVGGMKETTLREMLNKKPERVIELAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L KL ++ G+EH
Sbjct: 113 PLGRQMMTKLHVYTGAEH 130
>gi|158520963|ref|YP_001528833.1| 50S ribosomal protein L13 [Desulfococcus oleovorans Hxd3]
gi|158509789|gb|ABW66756.1| ribosomal protein L13 [Desulfococcus oleovorans Hxd3]
Length = 145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G +K T K+ +E+ P + + AV MLP+NKL +KL+++ G EHP + EP
Sbjct: 82 YVGGIKAITAKKLLEKKPEDLVVHAVRGMLPKNKLGRALLKKLKVYAGPEHPHSAQQPEP 141
>gi|116515175|ref|YP_802804.1| 50S ribosomal protein L13 [Buchnera aphidicola BCc]
gi|122285429|sp|Q057I8.1|RL13_BUCCC RecName: Full=50S ribosomal protein L13
gi|116257029|gb|ABJ90711.1| 50S ribosomal protein L13 [Buchnera aphidicola BCc]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T K M PT I+KA+ MLP+ L +KL++FP ++H
Sbjct: 80 YVGGIKKYTFKYMMLHHPTRIIKKAIKGMLPKGSLGQKIFKKLKVFPFNQH 130
>gi|331703683|ref|YP_004400370.1| 50S ribosomal protein L13 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802238|emb|CBW54392.1| 50S ribosomal protein L13 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 151
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R+++ Q E D T+ + +A+ MLP+N ++ R L IF GS+HPF
Sbjct: 83 GGLKKRSVEVQRELDATKILERAIRLMLPKNVQGSNQYRALHIFKGSQHPFA 134
>gi|299541964|ref|ZP_07052287.1| 50S ribosomal protein L13 [Lysinibacillus fusiformis ZC1]
gi|424739402|ref|ZP_18167821.1| 50S ribosomal protein L13 [Lysinibacillus fusiformis ZB2]
gi|298725702|gb|EFI66343.1| 50S ribosomal protein L13 [Lysinibacillus fusiformis ZC1]
gi|422946799|gb|EKU41205.1| 50S ribosomal protein L13 [Lysinibacillus fusiformis ZB2]
Length = 145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
++ G LK RT E +++ PT I AV MLP+N L KL ++ G+EHP + E
Sbjct: 80 QFAGGLKTRTAGEMLDKYPTRMIELAVKGMLPKNSLGRKMFTKLNVYTGTEHPHAAQKPE 139
Query: 88 PY 89
Y
Sbjct: 140 AY 141
>gi|300857820|ref|YP_003782803.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
FRC41]
gi|375287988|ref|YP_005122529.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
3/99-5]
gi|379714690|ref|YP_005303027.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 316]
gi|383313585|ref|YP_005374440.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
P54B96]
gi|384504006|ref|YP_005680676.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 1002]
gi|384506095|ref|YP_005682764.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis C231]
gi|384508185|ref|YP_005684853.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis I19]
gi|384510280|ref|YP_005689858.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
PAT10]
gi|385806854|ref|YP_005843251.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 267]
gi|386739756|ref|YP_006212936.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 31]
gi|387135952|ref|YP_005691932.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
42/02-A]
gi|387138012|ref|YP_005693991.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387140040|ref|YP_005696018.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
1/06-A]
gi|389849759|ref|YP_006351994.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 258]
gi|392399960|ref|YP_006436560.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
Cp162]
gi|300685274|gb|ADK28196.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
FRC41]
gi|302205556|gb|ADL09898.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis C231]
gi|302330111|gb|ADL20305.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 1002]
gi|308275791|gb|ADO25690.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis I19]
gi|341824219|gb|AEK91740.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
PAT10]
gi|348606397|gb|AEP69670.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
42/02-A]
gi|349734490|gb|AEQ05968.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355391831|gb|AER68496.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
1/06-A]
gi|371575277|gb|AEX38880.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
3/99-5]
gi|377653396|gb|AFB71745.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 316]
gi|380869086|gb|AFF21560.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
P54B96]
gi|383804247|gb|AFH51326.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 267]
gi|384476450|gb|AFH90246.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 31]
gi|388247065|gb|AFK16056.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis 258]
gi|390531038|gb|AFM06767.1| 50S ribosomal protein L13 [Corynebacterium pseudotuberculosis
Cp162]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + I S E + YR Y G LK TL +E P I +++ M+P N
Sbjct: 53 HVIVINADKVHISSNKREREMRYRHSGYPGGLKTMTLGRSLEVHPERVIEESIRGMMPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L +KL +F GSEHP+ + E Y
Sbjct: 113 RLSRASVKKLHVFAGSEHPYAAQKPETY 140
>gi|255020655|ref|ZP_05292717.1| LSU ribosomal protein L13p (L13Ae) [Acidithiobacillus caldus ATCC
51756]
gi|340781188|ref|YP_004747795.1| 50S ribosomal protein L13p (L13Ae) [Acidithiobacillus caldus SM-1]
gi|254969891|gb|EET27391.1| LSU ribosomal protein L13p (L13Ae) [Acidithiobacillus caldus ATCC
51756]
gi|340555341|gb|AEK57095.1| LSU ribosomal protein L13p (L13Ae) [Acidithiobacillus caldus SM-1]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD---RP 85
Y+G+LK + ++ ME P I AV MLP+N L RKL+++ G+EHP RP
Sbjct: 80 YVGNLKSASFEKMMETHPERVIEIAVKGMLPKNPLGRAMYRKLKVYAGAEHPHSAQQPRP 139
Query: 86 LE 87
L+
Sbjct: 140 LD 141
>gi|406971729|gb|EKD95722.1| hypothetical protein ACD_24C00369G0001 [uncultured bacterium]
Length = 138
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G KE L + R PTE +R AV MLP+NKLRD R+L +F +H F
Sbjct: 81 YPGGYKEEPLNKLKSRKPTEIVRLAVSGMLPKNKLRDTMLRRLYLFAQDQHTF 133
>gi|350551405|ref|ZP_08920620.1| ribosomal protein L13 [Thiorhodospira sibirica ATCC 700588]
gi|349797015|gb|EGZ50793.1| ribosomal protein L13 [Thiorhodospira sibirica ATCC 700588]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 20 NDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
ND+M + Y+G++K + MER P A+ AV RM+PRN L RKL+IF ++
Sbjct: 70 NDKMYYRHSGYVGNMKSMNFSQLMERAPERALELAVKRMMPRNALGRAMMRKLKIFASAD 129
Query: 79 H 79
H
Sbjct: 130 H 130
>gi|384109224|ref|ZP_10010105.1| ribosomal protein L13, bacterial type [Treponema sp. JC4]
gi|383869182|gb|EID84800.1| ribosomal protein L13, bacterial type [Treponema sp. JC4]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + ++ + Y ++G L+ T ++ ME+ PT+ I AV MLP N
Sbjct: 53 YVVIINADKVAVTGGKEQKKIYYHHTGFVGGLRAHTFEKLMEKHPTDPIALAVAGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
+L ++I+ G+EHP
Sbjct: 113 RLGRKLMDNVKIYAGAEHP 131
>gi|373496628|ref|ZP_09587174.1| ribosomal protein L13 [Fusobacterium sp. 12_1B]
gi|404368553|ref|ZP_10973903.1| ribosomal protein L13 [Fusobacterium ulcerans ATCC 49185]
gi|371965517|gb|EHO83017.1| ribosomal protein L13 [Fusobacterium sp. 12_1B]
gi|404288441|gb|EFS24684.2| ribosomal protein L13 [Fusobacterium ulcerans ATCC 49185]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L+ER L E +++ P E + AV RMLP+NKL ++ +LR+F G+EH
Sbjct: 84 GGLRERKLGEILDKKPEELLMLAVKRMLPKNKLGREQLTRLRVFAGAEHA 133
>gi|256544378|ref|ZP_05471753.1| 50S ribosomal protein L13 [Anaerococcus vaginalis ATCC 51170]
gi|256399910|gb|EEU13512.1| 50S ribosomal protein L13 [Anaerococcus vaginalis ATCC 51170]
Length = 146
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 8 FFILRNL--FILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+ I+ N +L+ N E Y+ Y G LK T ++ M++ P + AV+ MLP N
Sbjct: 56 YVIVVNAEKVVLTGNKEYQKEYKRYSGYAGGLKTTTYQDMMDKHPERIVEHAVVGMLPHN 115
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL +KLR++ G H
Sbjct: 116 KLGRQMAKKLRVYVGENH 133
>gi|395772101|ref|ZP_10452616.1| 50S ribosomal protein L13 [Streptomyces acidiscabies 84-104]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ E ++++P +AI KAV MLP+N L KL+++ G +HP G + +P
Sbjct: 80 YPGGLRSVRYDELLDKNPEKAIEKAVKGMLPKNTLGRQMLSKLKVYRGDQHPHGAQQPQP 139
Query: 89 YVM 91
+V+
Sbjct: 140 FVI 142
>gi|312199988|ref|YP_004020049.1| 50S ribosomal protein L13 [Frankia sp. EuI1c]
gi|311231324|gb|ADP84179.1| ribosomal protein L13 [Frankia sp. EuI1c]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +SL+ E S YR Y G L+ + E ++ P + KA+ MLP+N
Sbjct: 53 FVIVVNAGKVSLSGSKREQSQYYRHSGYPGGLRSTSYGELLDTRPQLLVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + RKL+++ G HP + +PY
Sbjct: 113 KLGRAQARKLKVYAGPIHPHQAQQPQPY 140
>gi|340756673|ref|ZP_08693278.1| 50S ribosomal protein L13 [Fusobacterium varium ATCC 27725]
gi|251833936|gb|EES62499.1| 50S ribosomal protein L13 [Fusobacterium varium ATCC 27725]
Length = 144
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L+ER L E +++ P E + AV RMLP+NKL ++ +LR+F G+EH
Sbjct: 84 GGLRERKLGEILDKKPEELLMLAVKRMLPKNKLGREQLTRLRVFAGAEHA 133
>gi|126650664|ref|ZP_01722887.1| 50S ribosomal protein L13 [Bacillus sp. B14905]
gi|126592820|gb|EAZ86819.1| 50S ribosomal protein L13 [Bacillus sp. B14905]
Length = 130
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
++ G LK RT E +++ PT I AV MLP+N L KL ++ G+EHP + E
Sbjct: 65 QFAGGLKTRTAGEMLDKYPTRMIELAVKGMLPKNSLGRKMFTKLNVYTGTEHPHAAQKPE 124
Query: 88 PY 89
Y
Sbjct: 125 AY 126
>gi|352089798|ref|ZP_08954103.1| ribosomal protein L13 [Rhodanobacter sp. 2APBS1]
gi|389797273|ref|ZP_10200316.1| 50S ribosomal protein L13 [Rhodanobacter sp. 116-2]
gi|351678966|gb|EHA62109.1| ribosomal protein L13 [Rhodanobacter sp. 2APBS1]
gi|388447647|gb|EIM03647.1| 50S ribosomal protein L13 [Rhodanobacter sp. 116-2]
Length = 142
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L+D+M + Y+G+LK +LK+ + P I AV MLP+N L + RKL+++ G+
Sbjct: 69 LDDKMYHRFTGYVGNLKTTSLKDLLATYPERVIEIAVKGMLPKNPLGREMYRKLKVYGGA 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|302553574|ref|ZP_07305916.1| ribosomal protein L13 [Streptomyces viridochromogenes DSM 40736]
gi|302471192|gb|EFL34285.1| ribosomal protein L13 [Streptomyces viridochromogenes DSM 40736]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +A+ KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +PY
Sbjct: 113 SLGRQMLSKLKVYKGDQHPHGAQQPQPY 140
>gi|402086197|gb|EJT81095.1| 50S ribosomal protein L13 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 185
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ + YR+ G L+ T+ M++ E +RKAV MLP+
Sbjct: 73 YVVVTNCAALYTTGMKKYRKTYYRHNTRPGSLRALTMDVLMDKLGGAEVLRKAVSGMLPK 132
Query: 61 NKLRDDRDRKLRIFPGSEHP-------FGDRPL 86
N+LR R +L+ F G HP FGD+P+
Sbjct: 133 NRLRQKRLARLKAFEGDAHPYRENLIRFGDKPV 165
>gi|406699249|gb|EKD02456.1| ribosomal protein L23 [Trichosporon asahii var. asahii CBS 8904]
Length = 335
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPG 76
+IG LKE + ER P E +R+AV MLP+N RD R +L+IFPG
Sbjct: 266 FIGGLKEVPITRMRERRPEEILRRAVSGMLPKNTFRDRRLERLKIFPG 313
>gi|389807010|ref|ZP_10203895.1| 50S ribosomal protein L13 [Rhodanobacter thiooxydans LCS2]
gi|388444800|gb|EIM00895.1| 50S ribosomal protein L13 [Rhodanobacter thiooxydans LCS2]
Length = 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V + + + L+D+M + Y+G+LK +LK+ + P I AV MLP+N
Sbjct: 53 YIVVINAQKVAVTGAKLDDKMYHRFTGYVGNLKTTSLKDLLATYPERVIEIAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + RKL+++ G+EHP
Sbjct: 113 PLGREMYRKLKVYGGAEHP 131
>gi|148243241|ref|YP_001228398.1| 50S ribosomal protein L13 [Synechococcus sp. RCC307]
gi|166199626|sp|A5GVY6.1|RL13_SYNR3 RecName: Full=50S ribosomal protein L13
gi|147851551|emb|CAK29045.1| 50S ribosomal protein L13 [Synechococcus sp. RCC307]
Length = 150
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYV 90
G +K T +R P + KA+ MLP N L RKL+++ G+EHP G + +PY
Sbjct: 83 GGMKVETFAALQQRIPERIVEKAIKGMLPHNALGRQLFRKLKVYKGAEHPHGAQQPQPYQ 142
Query: 91 MPP 93
+ P
Sbjct: 143 LNP 145
>gi|365881049|ref|ZP_09420381.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. ORS 375]
gi|365290814|emb|CCD92912.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. ORS 375]
Length = 154
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 22 EMSVSYR---YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
E V Y+ Y+GH+KERT ++ +E R P I KAV RM+PR L + LR++ G
Sbjct: 70 EQKVYYKHTGYVGHVKERTARQILEGRFPERVIEKAVERMIPRGPLGRVQMGNLRVYGGP 129
Query: 78 EHP 80
+HP
Sbjct: 130 DHP 132
>gi|359768912|ref|ZP_09272677.1| 50S ribosomal protein L13 [Gordonia polyisoprenivorans NBRC 16320]
gi|378717106|ref|YP_005281995.1| 50S ribosomal protein L13 [Gordonia polyisoprenivorans VH2]
gi|359313609|dbj|GAB25510.1| 50S ribosomal protein L13 [Gordonia polyisoprenivorans NBRC 16320]
gi|375751809|gb|AFA72629.1| 50S ribosomal protein L13 [Gordonia polyisoprenivorans VH2]
Length = 147
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S E ++YR+ GH LK +T E +E P + KA+ MLP
Sbjct: 53 FVIIINAEKVALTSNKAERKLNYRHSGHPGGLKVQTTAELLESHPERVVEKAITGMLPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPF-GDRPL 86
KL KL+++ G HP RP+
Sbjct: 113 KLGRAMASKLKVYAGPNHPHAAQRPV 138
>gi|340359411|ref|ZP_08681897.1| 50S ribosomal protein L13 [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339884732|gb|EGQ74500.1| 50S ribosomal protein L13 [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 147
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + + +YR Y G LK + +E +++ P A+ KAV M+P
Sbjct: 53 YVIIVNADKVVLTNGKADRKFAYRHSGYPGGLKAVSYRELLDKRPERAVEKAVKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + RKLR++ G+EHP
Sbjct: 113 KLGRAQLRKLRVYAGAEHP 131
>gi|406958031|gb|EKD85824.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 140
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 29 YIGH------LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YI H L+E +++ +E DP + + +AV MLP+NKLR +R L ++ G EHP
Sbjct: 75 YIHHTGFPKGLREVKIEKILENDPAQILVRAVTGMLPKNKLRSERLTNLHVYAGPEHP 132
>gi|348590674|ref|YP_004875136.1| 50S ribosomal protein L13p [Taylorella asinigenitalis MCE3]
gi|347974578|gb|AEP37113.1| LSU ribosomal protein L13p (L13Ae) [Taylorella asinigenitalis MCE3]
gi|399116992|emb|CCG19804.1| 50S ribosomal protein L13 [Taylorella asinigenitalis 14/45]
Length = 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V +++ + E +R+ G+ + E ++ ER P AI+KAV MLP+
Sbjct: 53 YIVIINAQDIVVTGSKFEDKKYFRHTGYPGGIYETNFRKLQERHPGRAIQKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+I+ GSEHP
Sbjct: 113 PLGYAMIKKLKIYAGSEHP 131
>gi|221194897|ref|ZP_03567953.1| ribosomal protein L13 [Atopobium rimae ATCC 49626]
gi|221184800|gb|EEE17191.1| ribosomal protein L13 [Atopobium rimae ATCC 49626]
Length = 146
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LK + +E ME+ P + AV MLP+ L + KL+++ G+EHP
Sbjct: 82 YLGGLKIESFQEAMEKHPERVVEHAVKGMLPKTTLGRKQGMKLKVYTGAEHP 133
>gi|258544193|ref|ZP_05704427.1| 50S ribosomal protein L13 [Cardiobacterium hominis ATCC 15826]
gi|258520569|gb|EEV89428.1| 50S ribosomal protein L13 [Cardiobacterium hominis ATCC 15826]
Length = 143
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 8 FFILRNLFILSL-----NDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLP 59
+ I+ N LS+ ND+ V YR YIG+LK T E R+P + + AV MLP
Sbjct: 54 YIIVVNAAKLSVTGKKRNDK--VYYRHTGYIGNLKSATFDEMQARNPGKVLEIAVKGMLP 111
Query: 60 RNKLRDDRDRKLRIFPGSEH 79
R L +KL+I+ GSEH
Sbjct: 112 RGPLGRAMLKKLKIYAGSEH 131
>gi|163868610|ref|YP_001609819.1| 50S ribosomal protein L13 [Bartonella tribocorum CIP 105476]
gi|189040992|sp|A9IVX4.1|RL13_BART1 RecName: Full=50S ribosomal protein L13
gi|161018266|emb|CAK01824.1| 50S ribosomal protein L13 [Bartonella tribocorum CIP 105476]
Length = 154
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQLLEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|406911194|gb|EKD51039.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + ++G L+E K+ +++DP I AV MLPR L + +KL+++ GS
Sbjct: 69 LEDKMYYHHTGFMGGLREINAKKLLDKDPGHIITAAVKGMLPRGPLGRKQLKKLKVYAGS 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|406881306|gb|EKD29410.1| 50S ribosomal subunit protein L13 [uncultured bacterium (gcode 4)]
Length = 143
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPR 60
YV+ + +F+ +E + YR Y+G LKE +L + P I A+ MLP+
Sbjct: 54 YVIVLNTKQVFVTGKKEEQKL-YRTHSGYMGGLKETSLGKLRSDRPNAIIEHAISGMLPK 112
Query: 61 NKLRDDRDRKLRIFPGSEHPFGDRPLEPYVM 91
N+LRD +L++ G H + + LE +
Sbjct: 113 NRLRDGMMNRLKLVDGEAHDYASQKLETITL 143
>gi|339445854|ref|YP_004711858.1| 50S ribosomal protein L13 [Eggerthella sp. YY7918]
gi|338905606|dbj|BAK45457.1| ribosomal protein L13 [Eggerthella sp. YY7918]
Length = 144
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LK T +E M + P I AV MLP+N L +KL+++ G+EHP
Sbjct: 82 GGLKSETFEEAMAKHPERVIEHAVKGMLPKNTLGRAMGKKLKVYTGAEHP 131
>gi|262201640|ref|YP_003272848.1| 50S ribosomal protein L13 [Gordonia bronchialis DSM 43247]
gi|262084987|gb|ACY20955.1| ribosomal protein L13 [Gordonia bronchialis DSM 43247]
Length = 147
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S + ++Y + GH LK RT E +E P + KA+ MLP N
Sbjct: 53 FVIIINAEKVALTSNKADRKLNYTHSGHPGGLKSRTTAELLESHPERVVEKAIKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAVASKLKVYAGPNHP 131
>gi|395777989|ref|ZP_10458502.1| 50S ribosomal protein L13 [Bartonella elizabethae Re6043vi]
gi|423715915|ref|ZP_17690136.1| 50S ribosomal protein L13 [Bartonella elizabethae F9251]
gi|395418298|gb|EJF84625.1| 50S ribosomal protein L13 [Bartonella elizabethae Re6043vi]
gi|395428359|gb|EJF94436.1| 50S ribosomal protein L13 [Bartonella elizabethae F9251]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQLLEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|348176850|ref|ZP_08883744.1| 50S ribosomal protein L13 [Saccharopolyspora spinosa NRRL 18395]
Length = 148
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + YR Y G L++++ E +E+ P + KA+ MLP+N
Sbjct: 53 FVVVVNAEKVALTGNKRTQAFQYRHSGYPGGLRKQSFGEVLEKHPERLLEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G EHP + +P+
Sbjct: 113 KLGRAMGKKLKVYAGPEHPHQAQNPQPF 140
>gi|226322920|ref|ZP_03798438.1| hypothetical protein COPCOM_00692 [Coprococcus comes ATCC 27758]
gi|225208706|gb|EEG91060.1| ribosomal protein L13 [Coprococcus comes ATCC 27758]
Length = 156
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E M + P + I AV MLP+ L +KL ++ G+EH
Sbjct: 94 YVGGMKETTLREMMAKKPEQVIELAVKGMLPKGPLGRTMIKKLHVYAGAEH 144
>gi|321249170|ref|XP_003191363.1| mitochondrial ribosomal protein L23 [Cryptococcus gattii WM276]
gi|317457830|gb|ADV19576.1| Mitochondrial ribosomal protein L23, putative [Cryptococcus gattii
WM276]
Length = 163
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
++G LK+ + ER P E IRKAV MLP+N RD R +L+IFPG+
Sbjct: 81 FMGGLKKVPITRLRERRPEEIIRKAVSGMLPKNTFRDRRLERLKIFPGA 129
>gi|85375399|ref|YP_459461.1| 50S ribosomal protein L13 [Erythrobacter litoralis HTCC2594]
gi|84788482|gb|ABC64664.1| ribosomal protein L13 [Erythrobacter litoralis HTCC2594]
Length = 159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 25 VSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
V Y++ GH +KE T + +E R P I KA+ RM+PR L D+ R L I+ G+EHP
Sbjct: 78 VYYKHTGHPGGIKETTPAKVLEGRFPERVIEKAIQRMIPRGPLGRDQMRALHIYAGTEHP 137
Query: 81 F-GDRP 85
G +P
Sbjct: 138 HDGQKP 143
>gi|405984006|ref|ZP_11042311.1| ribosomal protein L13 [Slackia piriformis YIT 12062]
gi|404388821|gb|EJZ83903.1| ribosomal protein L13 [Slackia piriformis YIT 12062]
Length = 145
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRYI------GHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + + + S Y G LK T E M++ P I AV MLP+N
Sbjct: 53 FVIIVNADKIRMTGTKATSKEYYRHSGFPGGLKMETFAEAMQKHPERVIEHAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + +KL+++ G EHP
Sbjct: 113 TLGRKQGKKLKVYVGPEHP 131
>gi|395787717|ref|ZP_10467309.1| 50S ribosomal protein L13 [Bartonella birtlesii LL-WM9]
gi|395410339|gb|EJF76894.1| 50S ribosomal protein L13 [Bartonella birtlesii LL-WM9]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|453077191|ref|ZP_21979950.1| 50S ribosomal protein L13 [Rhodococcus triatomae BKS 15-14]
gi|452759786|gb|EME18136.1| 50S ribosomal protein L13 [Rhodococcus triatomae BKS 15-14]
Length = 147
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S + + GH LK R++ E +E +P + KAV+ M+P+N
Sbjct: 53 FVVIINADKVAISGNKRTDKFLHHHSGHPGGLKSRSVGEVLENNPDRLVEKAVVGMIPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G HP + P+
Sbjct: 113 KLGRAIAGKLKVYAGPNHPHAAQQPVPF 140
>gi|395784258|ref|ZP_10464097.1| 50S ribosomal protein L13 [Bartonella melophagi K-2C]
gi|395424013|gb|EJF90201.1| 50S ribosomal protein L13 [Bartonella melophagi K-2C]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPQRIVEKAVERMIPRGPLGRRQMKNLRVYAGSQHP 132
>gi|169349496|ref|ZP_02866434.1| hypothetical protein CLOSPI_00214 [Clostridium spiroforme DSM 1552]
gi|169293571|gb|EDS75704.1| ribosomal protein L13 [Clostridium spiroforme DSM 1552]
Length = 145
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
++G LK +T ++ E++PT + AV MLP N L + KL ++ G+EHP +P+E
Sbjct: 81 WLGGLKVKTARQFKEQNPTGWVEAAVKGMLPHNTLGRKQGMKLFVYAGNEHPHAAQKPVE 140
>gi|395767124|ref|ZP_10447659.1| 50S ribosomal protein L13 [Bartonella doshiae NCTC 12862]
gi|395414437|gb|EJF80879.1| 50S ribosomal protein L13 [Bartonella doshiae NCTC 12862]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|386402519|ref|ZP_10087297.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. WSM1253]
gi|385743145|gb|EIG63341.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. WSM1253]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+GH+KERT ++ +E + P + KAV RM+PR L + LR++ G++HP
Sbjct: 80 YVGHIKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHPH 133
>gi|189426240|ref|YP_001953417.1| 50S ribosomal protein L13 [Geobacter lovleyi SZ]
gi|226702864|sp|B3EA22.1|RL13_GEOLS RecName: Full=50S ribosomal protein L13
gi|189422499|gb|ACD96897.1| ribosomal protein L13 [Geobacter lovleyi SZ]
Length = 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G +K T + + P E IRKAV MLP+NKL +KL+++ G HP
Sbjct: 82 GGIKSSTAAAMLSKKPEELIRKAVKGMLPKNKLARHMLKKLKVYSGGAHP 131
>gi|169830538|ref|YP_001716520.1| 50S ribosomal protein L13 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637382|gb|ACA58888.1| ribosomal protein L13 [Candidatus Desulforudis audaxviator MP104C]
Length = 145
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + M + P EA+RKAV+ MLP +L +KL+++ G EHP
Sbjct: 83 YPGGLKAVDYRTFMAKRPEEAVRKAVVGMLPHTRLGAQMAKKLKVYAGPEHP 134
>gi|395793233|ref|ZP_10472638.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713002|ref|ZP_17687262.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|451941906|ref|YP_007462543.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|395424628|gb|EJF90808.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395431547|gb|EJF97565.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|451901293|gb|AGF75755.1| 50S ribosomal protein L13 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 154
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|399925090|ref|ZP_10782448.1| 50S ribosomal protein L13 [Peptoniphilus rhinitidis 1-13]
Length = 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G KE E ME+ P + I AV MLP+N+L +KL+++ GSEHP + E
Sbjct: 80 YPGGRKEIVYSEMMEKRPEKVIELAVKGMLPKNRLGRKMIKKLKVYAGSEHPHAAQSPEV 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|297568333|ref|YP_003689677.1| 50S ribosomal protein L13 [Desulfurivibrio alkaliphilus AHT2]
gi|296924248|gb|ADH85058.1| ribosomal protein L13 [Desulfurivibrio alkaliphilus AHT2]
Length = 142
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
V YR YIG +K T ++ +R P E + +AV MLP+N L + +KL+++ GSEHP
Sbjct: 73 VYYRHTGYIGGIKAETAEKLRDRKPEELVYRAVKGMLPKNPLGRKQLKKLKVYAGSEHP 131
>gi|443294109|ref|ZP_21033203.1| 50S ribosomal subunit protein L13 [Micromonospora lupini str. Lupac
08]
gi|385882894|emb|CCH21354.1| 50S ribosomal subunit protein L13 [Micromonospora lupini str. Lupac
08]
Length = 147
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR Y G LK+ E + + P AI AV MLP N
Sbjct: 53 FVVIVNAGKVALTGNKRQTKVAYRHSGYPGGLKQVGYDELLTKRPERAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G+EHP
Sbjct: 113 KLGRQLIKKLKVYAGAEHP 131
>gi|58583776|ref|YP_202792.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84625586|ref|YP_452958.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574889|ref|YP_001911818.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|75508056|sp|Q5GV66.1|RL13_XANOR RecName: Full=50S ribosomal protein L13
gi|118573466|sp|Q2NYE3.1|RL13_XANOM RecName: Full=50S ribosomal protein L13
gi|226705054|sp|B2SL09.1|RL13_XANOP RecName: Full=50S ribosomal protein L13
gi|58428370|gb|AAW77407.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84369526|dbj|BAE70684.1| 50S ribosomal protein L13 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519341|gb|ACD57286.1| ribosomal protein L13 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK +L++ ++R P I AV MLP+ + RKL+++ G+EHP
Sbjct: 80 YIGNLKTESLEQALQRHPERVIEIAVKGMLPKGPMGRTMYRKLKVYSGAEHP 131
>gi|304405586|ref|ZP_07387245.1| ribosomal protein L13 [Paenibacillus curdlanolyticus YK9]
gi|304345625|gb|EFM11460.1| ribosomal protein L13 [Paenibacillus curdlanolyticus YK9]
Length = 145
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK T + +++ P + AV MLP+N+L D KL+++ GSEHP
Sbjct: 81 YPGGLKVTTANDMLQKHPERVLEAAVHGMLPKNRLGDKMKLKLKVYAGSEHP 132
>gi|302334965|ref|YP_003800172.1| 50S ribosomal protein L13 [Olsenella uli DSM 7084]
gi|301318805|gb|ADK67292.1| LSU ribosomal protein L13P [Olsenella uli DSM 7084]
Length = 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++G LK + KE ME+ P + A+ MLP+ L + KL+++ G EHP
Sbjct: 82 WLGGLKTESFKEAMEKHPERVVEHAIKGMLPKTTLGRKQGTKLKVYAGPEHP 133
>gi|378550947|ref|ZP_09826163.1| hypothetical protein CCH26_12699 [Citricoccus sp. CH26A]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR+ G L + E +E++P A+ KAV MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEKKRAYRHSGFPGGLSSVSYAELLEKNPVRAVEKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L ++ KL+++ G+EHP
Sbjct: 113 SLAAEQIHKLKVYRGAEHP 131
>gi|400599497|gb|EJP67194.1| ribosomal protein L13 [Beauveria bassiana ARSEF 2860]
Length = 217
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 105 YVVATNCAALYTTGNKKWRKTYYRHNTRPGSLRAVTMDVLMEKHGGAEVLRKAVSGMLPK 164
Query: 61 NKLRDDRDRKLRIFPGSEHPFGD 83
N+LRD R +L+ F G HP+ D
Sbjct: 165 NRLRDKRLARLKAFEGDAHPYKD 187
>gi|390951825|ref|YP_006415584.1| 50S ribosomal protein L13 [Thiocystis violascens DSM 198]
gi|390428394|gb|AFL75459.1| LSU ribosomal protein L13P [Thiocystis violascens DSM 198]
Length = 145
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + Y+G+LK L + +E+ P AI+ AV MLPR L RKLR++ G
Sbjct: 70 LQDKMYYRHTGYVGNLKSMNLAKLLEKTPERAIQLAVKGMLPRGPLGRAMFRKLRVYAGP 129
Query: 78 EHPFGDRPLEPYVM 91
EH G + +P V+
Sbjct: 130 EH--GHQAQQPQVL 141
>gi|296114585|ref|ZP_06833238.1| 50S ribosomal protein L13 [Gluconacetobacter hansenii ATCC 23769]
gi|295978941|gb|EFG85666.1| 50S ribosomal protein L13 [Gluconacetobacter hansenii ATCC 23769]
Length = 160
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +K+RT+ +++E ++P +RKAV RM+ R L+ + + L ++ GSEHP G +P
Sbjct: 81 YPGGIKQRTITQRLEGKNPGHVVRKAVERMITRGPLQRAQMKHLYVYAGSEHPHDGQKP 139
>gi|58262940|ref|XP_568880.1| mitochondrial ribosomal protein L23 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134108172|ref|XP_777284.1| mitochondrial 54S ribosomal protein YmL23 [Cryptococcus neoformans
var. neoformans B-3501A]
gi|50259971|gb|EAL22637.1| hypothetical protein CNBB2690 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223530|gb|AAW41573.1| mitochondrial ribosomal protein L23, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 163
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
++G LK+ + ER P E IRKAV MLP+N RD R +L+IFPG+
Sbjct: 81 FMGGLKKVPITRLRERRPEEIIRKAVSGMLPKNTFRDRRLERLKIFPGA 129
>gi|297170902|gb|ADI21920.1| hypothetical protein [uncultured gamma proteobacterium
HF0130_26L16]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G +KE TL EQ+++ PT I AV MLP+N L KLR++ G +H
Sbjct: 80 YPGGIKEITLGEQLQKHPTRVIESAVKGMLPKNPLGRAMFAKLRVYAGPDH 130
>gi|291541847|emb|CBL14957.1| LSU ribosomal protein L13P [Ruminococcus bromii L2-63]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIGHLKE M PT+A+ AV MLP+N L +LR+F G+EH
Sbjct: 80 YIGHLKETRYDTLMATKPTKAMELAVKGMLPKNTLGRAALLRLRLFEGAEH 130
>gi|256384106|gb|ACU78676.1| ribosomal protein L13 [Mycoplasma mycoides subsp. capri str. GM12]
gi|256384938|gb|ACU79507.1| ribosomal protein L13 [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455845|gb|ADH22080.1| ribosomal protein L13 [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 151
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R+++ Q E D T+ + +A+ MLP+N ++ R L +F GS+HPF
Sbjct: 83 GGLKKRSVEVQRELDATKILERAIRLMLPKNVQGSNQYRALHVFKGSQHPFA 134
>gi|406932721|gb|EKD67608.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
Y G LK+ T + E P E +R AV MLP+NKLRD +L ++ HP+ +
Sbjct: 85 YPGGLKKTTAGDLKEAHPEELVRHAVSGMLPKNKLRDQWLTRLHVYKDDSHPYANH 140
>gi|384564406|ref|ZP_10011510.1| ribosomal protein L13, bacterial type [Saccharomonospora glauca
K62]
gi|384520260|gb|EIE97455.1| ribosomal protein L13, bacterial type [Saccharomonospora glauca
K62]
Length = 150
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + +YR Y G L++R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKRDQKFAYRHSGYPGGLRKRSFGELLDTRPERLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPEHPHAAQKPQPH 140
>gi|260494363|ref|ZP_05814494.1| ribosomal protein L13 [Fusobacterium sp. 3_1_33]
gi|289766084|ref|ZP_06525462.1| LSU ribosomal protein L13P [Fusobacterium sp. D11]
gi|336401378|ref|ZP_08582149.1| 50S ribosomal protein L13 [Fusobacterium sp. 21_1A]
gi|336418846|ref|ZP_08599116.1| ribosomal protein L13 [Fusobacterium sp. 11_3_2]
gi|260198509|gb|EEW96025.1| ribosomal protein L13 [Fusobacterium sp. 3_1_33]
gi|289717639|gb|EFD81651.1| LSU ribosomal protein L13P [Fusobacterium sp. D11]
gi|336161288|gb|EGN64295.1| 50S ribosomal protein L13 [Fusobacterium sp. 21_1A]
gi|336164209|gb|EGN67118.1| ribosomal protein L13 [Fusobacterium sp. 11_3_2]
Length = 144
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV L + L D++ ++ Y G ++ R L E +E+ P E + AV RMLP+N
Sbjct: 55 YVVVTNASKLVVTGKKLTDKVYYNHSGYPGGIRARRLGEILEKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|256826625|ref|YP_003150584.1| 50S ribosomal protein L13P [Cryptobacterium curtum DSM 15641]
gi|256582768|gb|ACU93902.1| LSU ribosomal protein L13P [Cryptobacterium curtum DSM 15641]
Length = 148
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK T E M++ P I AV MLP+N L +KL+++ G +HP
Sbjct: 84 YPGGLKSETFAEAMQKHPERVIEHAVKGMLPKNTLGRAMGKKLKVYAGPDHP 135
>gi|372210231|ref|ZP_09498033.1| 50S ribosomal protein L13 [Flavobacteriaceae bacterium S85]
Length = 151
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T E E+DPT I KAV MLP+NKL + + L ++ G+EH
Sbjct: 85 YPGGQRSLTATEMFEKDPTRLIEKAVKGMLPKNKLGNALYKNLYVYAGAEH 135
>gi|317500809|ref|ZP_07959022.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089715|ref|ZP_08338612.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336440722|ref|ZP_08620300.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 1_1_57FAA]
gi|316897776|gb|EFV19834.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330404296|gb|EGG83842.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336012234|gb|EGN42156.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TL E M + P + I AV MLP+ + D +KL ++ G+EH
Sbjct: 80 YVGGMRETTLAEMMAKKPEKVIELAVKGMLPKGPMGRDMIKKLHVYAGAEH 130
>gi|254574490|ref|XP_002494354.1| mitochondrial 54S ribosomal protein YmL23 [Komagataella pastoris
GS115]
gi|238034153|emb|CAY72175.1| Mitochondrial ribosomal protein of the large subunit [Komagataella
pastoris GS115]
gi|328353829|emb|CCA40226.1| 50S ribosomal protein L13 [Komagataella pastoris CBS 7435]
Length = 161
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 48 EAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
E +RKAV RMLP+NKLR R ++LR+F SEHP+
Sbjct: 103 EILRKAVSRMLPKNKLRKQRLQRLRVFESSEHPY 136
>gi|319408570|emb|CBI82223.1| 50S ribosomal protein L13 [Bartonella schoenbuchensis R1]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKERTARQILEGRFPERIVEKAVERMIPRGPLGRRQMKNLRVYAGSQHP 132
>gi|218135246|ref|ZP_03464050.1| hypothetical protein BACPEC_03151 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990631|gb|EEC56642.1| ribosomal protein L13 [[Bacteroides] pectinophilus ATCC 43243]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE M + P I AV MLP+ L + +KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMMAKKPERVIELAVKGMLPKGPLGREMFKKLHVYAGPEH 130
>gi|27380074|ref|NP_771603.1| 50S ribosomal protein L13 [Bradyrhizobium japonicum USDA 110]
gi|81736737|sp|Q89KE4.1|RL13_BRAJA RecName: Full=50S ribosomal protein L13
gi|27353228|dbj|BAC50228.1| 50S ribosomal protein L13 [Bradyrhizobium japonicum USDA 110]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+GH+KERT ++ +E + P + KAV RM+PR L + LR++ G++HP
Sbjct: 80 YVGHVKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHPH 133
>gi|389794096|ref|ZP_10197255.1| 50S ribosomal protein L13 [Rhodanobacter fulvus Jip2]
gi|388432882|gb|EIL89866.1| 50S ribosomal protein L13 [Rhodanobacter fulvus Jip2]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK +LK+ + P I AV MLP+N L + RKL+++ G+EHP
Sbjct: 80 YVGNLKTTSLKDLLATYPERVIEIAVKGMLPKNPLGREMYRKLKVYGGAEHP 131
>gi|374575884|ref|ZP_09648980.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. WSM471]
gi|374424205|gb|EHR03738.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. WSM471]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+GH+KERT ++ +E + P + KAV RM+PR L + LR++ G++HP
Sbjct: 80 YVGHVKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHPH 133
>gi|384218412|ref|YP_005609578.1| 50S ribosomal protein L13 [Bradyrhizobium japonicum USDA 6]
gi|398823671|ref|ZP_10582027.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. YR681]
gi|421598942|ref|ZP_16042255.1| 50S ribosomal protein L13 [Bradyrhizobium sp. CCGE-LA001]
gi|354957311|dbj|BAL09990.1| 50S ribosomal protein L13 [Bradyrhizobium japonicum USDA 6]
gi|398225644|gb|EJN11910.1| ribosomal protein L13, bacterial type [Bradyrhizobium sp. YR681]
gi|404268947|gb|EJZ33314.1| 50S ribosomal protein L13 [Bradyrhizobium sp. CCGE-LA001]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+GH+KERT ++ +E + P + KAV RM+PR L + LR++ G++HP
Sbjct: 80 YVGHVKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHPH 133
>gi|317125824|ref|YP_004099936.1| 50S ribosomal protein L13 [Intrasporangium calvum DSM 43043]
gi|315589912|gb|ADU49209.1| LSU ribosomal protein L13P [Intrasporangium calvum DSM 43043]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR+ G LK + E + + P +AI KAV MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKKAYRHSGFPGGLKATSYTELLAKSPEKAIEKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G+EHP + P+
Sbjct: 113 SLARHQLAKLKVYRGAEHPHAAQQPVPF 140
>gi|402226615|gb|EJU06675.1| ribosomal protein L13, partial [Dacryopinax sp. DJM-731 SS1]
Length = 178
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 15 FILSLNDEMSVSYRYI----GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRK 70
+++ N + YR+ G LKE K E+ P + I+ AV MLP+NKLRD R R+
Sbjct: 63 VVVTGNKADQIMYRHHTGRPGGLKEIPYKVMQEKRPDKIIKLAVSGMLPKNKLRDKRMRR 122
Query: 71 LRIFPGSEHP 80
L ++PG ++P
Sbjct: 123 LVVYPGEKNP 132
>gi|367473687|ref|ZP_09473235.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. ORS 285]
gi|365274083|emb|CCD85703.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. ORS 285]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+GH+KERT ++ +E R P I KAV RM+PR L + LR++ G +HP
Sbjct: 80 YVGHVKERTARQILEGRFPERVIEKAVERMIPRGPLGRVQMGNLRVYGGPDHP 132
>gi|343925125|ref|ZP_08764657.1| 50S ribosomal protein L13 [Gordonia alkanivorans NBRC 16433]
gi|343765056|dbj|GAA11583.1| 50S ribosomal protein L13 [Gordonia alkanivorans NBRC 16433]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S E ++Y + GH L+ RT E +E P I KA+ MLP N
Sbjct: 53 FVIIINAEKVALTSNKAERKLNYTHSGHPGGLQSRTTAELLETFPERVIEKAIKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|402834391|ref|ZP_10882993.1| ribosomal protein L13 [Selenomonas sp. CM52]
gi|402278009|gb|EJU27075.1| ribosomal protein L13 [Selenomonas sp. CM52]
Length = 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 15 FILSLNDEMSV----------SYRYIGHLKERTLKEQ---MERDPTEAIRKAVLRMLPRN 61
F++ +N E +V +R+ G+ T ME+ P + I KAV MLP+N
Sbjct: 54 FVIVINAEKAVFTGKKLTDKMYFRHSGYPGGTTFTAAGKLMEKAPEKVIEKAVRGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEHP 80
+L RKL ++ GSEHP
Sbjct: 114 RLGAQMYRKLNVYAGSEHP 132
>gi|259645565|sp|C0ZW77.1|RL13_RHOE4 RecName: Full=50S ribosomal protein L13
gi|226184508|dbj|BAH32612.1| 50S ribosomal protein L13 [Rhodococcus erythropolis PR4]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LK RT+ E ++R P + KA++ MLP+ KL KL+++ G HP
Sbjct: 82 GGLKSRTVGEVLDRTPDRLVEKAIVGMLPKTKLGRAMSSKLKVYAGPNHP 131
>gi|85716236|ref|ZP_01047210.1| 50S ribosomal protein L13 [Nitrobacter sp. Nb-311A]
gi|85696908|gb|EAQ34792.1| 50S ribosomal protein L13 [Nitrobacter sp. Nb-311A]
Length = 154
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K+RT K +E R P I KAV RM+PR L + LR++ G+EHP
Sbjct: 80 YIGGIKQRTAKSILEGRFPERVIEKAVERMIPRGPLGRVQLGNLRVYAGAEHP 132
>gi|229489485|ref|ZP_04383348.1| ribosomal protein L13 [Rhodococcus erythropolis SK121]
gi|453068404|ref|ZP_21971683.1| 50S ribosomal protein L13 [Rhodococcus qingshengii BKS 20-40]
gi|229323582|gb|EEN89340.1| ribosomal protein L13 [Rhodococcus erythropolis SK121]
gi|452766054|gb|EME24305.1| 50S ribosomal protein L13 [Rhodococcus qingshengii BKS 20-40]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LK RT+ E ++R P + KA++ MLP+ KL KL+++ G HP
Sbjct: 82 GGLKSRTVGEVLDRTPDRLVEKAIVGMLPKTKLGRAMSSKLKVYAGPNHP 131
>gi|167957399|ref|ZP_02544473.1| ribosomal protein L13 [candidate division TM7 single-cell isolate
TM7c]
Length = 136
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + V Y + G +K+ L+E + P I AV MLP+N
Sbjct: 46 YVVVINAAQAVVTGQKETDKVYYHHSGFPGGIKDARLEEVRAKFPERIIENAVKGMLPKN 105
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL+ DR ++LR+F GSEH
Sbjct: 106 KLQADRMKRLRVFAGSEH 123
>gi|256380550|ref|YP_003104210.1| 50S ribosomal protein L13 [Actinosynnema mirum DSM 43827]
gi|255924853|gb|ACU40364.1| ribosomal protein L13 [Actinosynnema mirum DSM 43827]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E + +YR+ GH L +++ E ++ + KA+ MLP+N
Sbjct: 53 FVIVINADKVALTGKKREQAFAYRHSGHPGGLSKQSFGELLDTRADRLVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L KL+++ GSEHP + +P+
Sbjct: 113 RLGRAMASKLKVYTGSEHPHAAQQPQPF 140
>gi|260589355|ref|ZP_05855268.1| ribosomal protein L13 [Blautia hansenii DSM 20583]
gi|331082751|ref|ZP_08331874.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540436|gb|EEX21005.1| ribosomal protein L13 [Blautia hansenii DSM 20583]
gi|330400370|gb|EGG80012.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE M++ P I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMMDKKPERVIELAVKGMLPKGPLGRSMIKKLHVYAGPEH 130
>gi|38233170|ref|NP_938937.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae NCTC 13129]
gi|375290227|ref|YP_005124767.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae 241]
gi|375292444|ref|YP_005126983.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae INCA 402]
gi|376242202|ref|YP_005133054.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae CDCE 8392]
gi|376245061|ref|YP_005135300.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC01]
gi|376247833|ref|YP_005139777.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC04]
gi|376250653|ref|YP_005137534.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC03]
gi|376253667|ref|YP_005142126.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae PW8]
gi|376256465|ref|YP_005144356.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae VA01]
gi|376284062|ref|YP_005157272.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae 31A]
gi|376287041|ref|YP_005159607.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae BH8]
gi|376292618|ref|YP_005164292.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC02]
gi|419860177|ref|ZP_14382822.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|81698594|sp|Q6NJ52.1|RL13_CORDI RecName: Full=50S ribosomal protein L13
gi|38199429|emb|CAE49073.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae]
gi|371577577|gb|AEX41245.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae 31A]
gi|371579898|gb|AEX43565.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae 241]
gi|371582115|gb|AEX45781.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae INCA 402]
gi|371584375|gb|AEX48040.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae BH8]
gi|372105444|gb|AEX71506.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae CDCE 8392]
gi|372107691|gb|AEX73752.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC01]
gi|372109941|gb|AEX76001.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC02]
gi|372112157|gb|AEX78216.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC03]
gi|372114401|gb|AEX80459.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae HC04]
gi|372116751|gb|AEX69221.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae PW8]
gi|372118982|gb|AEX82716.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae VA01]
gi|387983385|gb|EIK56862.1| 50S ribosomal protein L13 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 147
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL +E P + +++ M+P N+L +KL +F GSEHP+ + E
Sbjct: 80 YPGGLKTMTLGRSLEVHPERVVEESIRGMMPHNRLSRASVKKLHVFAGSEHPYAAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|153816309|ref|ZP_01968977.1| hypothetical protein RUMTOR_02560 [Ruminococcus torques ATCC 27756]
gi|145846362|gb|EDK23280.1| ribosomal protein L13 [Ruminococcus torques ATCC 27756]
Length = 153
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TL E M + P + I AV MLP+ + D +KL ++ G+EH
Sbjct: 91 YVGGMRETTLAEMMAKKPEKVIELAVKGMLPKGPMGRDMIKKLHVYAGAEH 141
>gi|427405790|ref|ZP_18895995.1| ribosomal protein L13 [Selenomonas sp. F0473]
gi|425708631|gb|EKU71670.1| ribosomal protein L13 [Selenomonas sp. F0473]
Length = 146
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T +E + R PT I AV MLP+N L RKL ++ GSEHP + EP
Sbjct: 81 YQGGTTFTTAEEMLRRFPTRVIEHAVKGMLPKNSLGAQMFRKLNVYVGSEHPHAAQKPEP 140
>gi|46580922|ref|YP_011730.1| 50S ribosomal protein L13 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601776|ref|YP_966176.1| 50S ribosomal protein L13 [Desulfovibrio vulgaris DP4]
gi|387154169|ref|YP_005703105.1| 50S ribosomal protein L13 [Desulfovibrio vulgaris RCH1]
gi|81699027|sp|Q728T4.1|RL13_DESVH RecName: Full=50S ribosomal protein L13
gi|166230980|sp|A1VBD3.1|RL13_DESVV RecName: Full=50S ribosomal protein L13
gi|46450342|gb|AAS96990.1| ribosomal protein L13 [Desulfovibrio vulgaris str. Hildenborough]
gi|120562005|gb|ABM27749.1| LSU ribosomal protein L13P [Desulfovibrio vulgaris DP4]
gi|311234613|gb|ADP87467.1| ribosomal protein L13 [Desulfovibrio vulgaris RCH1]
Length = 144
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR---P 85
Y+G L+E +L++ + P E + KAV MLPRN+L KL+++ G+EHP + P
Sbjct: 80 YVGGLRETSLEKLLASKPEEVLLKAVRGMLPRNRLGRAMLTKLKVYRGTEHPHAAQKPTP 139
Query: 86 LE 87
LE
Sbjct: 140 LE 141
>gi|383771474|ref|YP_005450539.1| 50S ribosomal protein L13 [Bradyrhizobium sp. S23321]
gi|381359597|dbj|BAL76427.1| 50S ribosomal protein L13 [Bradyrhizobium sp. S23321]
Length = 154
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y+GH+KERT ++ +E + P + KAV RM+PR L + LR++ G++HP
Sbjct: 80 YVGHVKERTARQILEGKHPERVLEKAVERMIPRGPLGRVQMGNLRVYGGADHPH 133
>gi|456354924|dbj|BAM89369.1| 50S ribosomal subunit protein L13 [Agromonas oligotrophica S58]
Length = 154
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 22 EMSVSYR---YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
E V Y+ Y+GH+KERT ++ +E R P I KA+ RM+PR L + LR++ G
Sbjct: 70 EQKVYYKHTGYVGHVKERTARQILEGRFPERVIEKAIERMIPRGPLGRVQMGNLRVYGGP 129
Query: 78 EHP 80
+HP
Sbjct: 130 DHP 132
>gi|299135056|ref|ZP_07028247.1| ribosomal protein L13 [Afipia sp. 1NLS2]
gi|298590033|gb|EFI50237.1| ribosomal protein L13 [Afipia sp. 1NLS2]
Length = 154
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KER+ K +E R P + KA+ RM+PR L + LR++PG+EHP
Sbjct: 80 FIGGIKERSAKSILEGRFPERVVEKAIERMIPRGPLGRIQMGNLRVYPGAEHP 132
>gi|332290117|ref|YP_004420969.1| 50S ribosomal protein L13 [Gallibacterium anatis UMN179]
gi|330433013|gb|AEC18072.1| 50S ribosomal protein L13 [Gallibacterium anatis UMN179]
Length = 145
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T E + R P I AV MLP+ L D RKL+++ GSEH
Sbjct: 83 YVGGIKQATFAEMIARRPERVIEIAVKGMLPKGPLGRDMYRKLKVYAGSEH 133
>gi|422481127|ref|ZP_16557529.1| ribosomal protein L13 [Propionibacterium acnes HL063PA1]
gi|313824836|gb|EFS62550.1| ribosomal protein L13 [Propionibacterium acnes HL063PA1]
Length = 161
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDEMSV-SYRY-----IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + S RY G L+ ++ E + ++P A+ +AV M+P+N
Sbjct: 67 FVVVVNASKIALTGKKATDSLRYDHSGRPGGLRVTSIGEMLAKNPRRAVERAVWGMMPKN 126
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G E+P + +PY
Sbjct: 127 KLSRQQLKKLKVYGGPENPHAAQNPQPY 154
>gi|302669998|ref|YP_003829958.1| 50S ribosomal protein L13 [Butyrivibrio proteoclasticus B316]
gi|302394471|gb|ADL33376.1| ribosomal protein L13 RplM [Butyrivibrio proteoclasticus B316]
Length = 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+GH KE +L++ ++ P I AV MLP+ L + KL ++ G+EHP
Sbjct: 80 YVGHHKEFSLRQMLQDKPERVIEHAVKGMLPKGSLGREMYTKLHVYAGAEHP 131
>gi|261415379|ref|YP_003249062.1| 50S ribosomal protein L13 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790305|ref|YP_005821428.1| 50S ribosomal protein L13 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371835|gb|ACX74580.1| ribosomal protein L13 [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302328097|gb|ADL27298.1| ribosomal protein L13 [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 15 FILSLNDE-MSVS---------YRYIGHLK-ERTLK--EQMERDPTEAIRKAVLRMLPRN 61
F++ +N E ++VS + + GH+ ER + + + ++PT + A+ MLP +
Sbjct: 53 FVVVINAEKVAVSGNKALQKQYFHHTGHIAGERWINFADLLAKNPTAPLEAAIWGMLPHS 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
L +KL+IF G+EHPF +
Sbjct: 113 ALGHKMIKKLKIFAGAEHPFAAQ 135
>gi|381164298|ref|ZP_09873528.1| ribosomal protein L13, bacterial type [Saccharomonospora azurea
NA-128]
gi|418460321|ref|ZP_13031420.1| 50S ribosomal protein L13 [Saccharomonospora azurea SZMC 14600]
gi|359739614|gb|EHK88475.1| 50S ribosomal protein L13 [Saccharomonospora azurea SZMC 14600]
gi|379256203|gb|EHY90129.1| ribosomal protein L13, bacterial type [Saccharomonospora azurea
NA-128]
Length = 150
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + +YR Y G L +R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKRDQKFAYRHSGYPGGLSKRSFGELLDTRPERLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPEHPHAAQKPQPH 140
>gi|240850784|ref|YP_002972184.1| 50S ribosomal protein L13 [Bartonella grahamii as4aup]
gi|240267907|gb|ACS51495.1| 50S ribosomal protein L13 [Bartonella grahamii as4aup]
Length = 154
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K+RT ++ +E R P I KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKQRTARQLLEGRFPERVIEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|291298448|ref|YP_003509726.1| 50S ribosomal protein L13 [Stackebrandtia nassauensis DSM 44728]
gi|290567668|gb|ADD40633.1| ribosomal protein L13 [Stackebrandtia nassauensis DSM 44728]
Length = 147
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNL--FILSLND-EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +L+ N E ++YR Y G LK+ ++ P AI+ AV MLP N
Sbjct: 53 FVIVVNAEKIVLTGNKREQKIAYRHSGYPGGLKKTPYSTLLDTKPERAIQLAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G+EHP + +P+
Sbjct: 113 KLGRKMLTKLKVYAGTEHPHAAQQPQPF 140
>gi|46116566|ref|XP_384301.1| hypothetical protein FG04125.1 [Gibberella zeae PH-1]
gi|408400613|gb|EKJ79691.1| hypothetical protein FPSE_00145 [Fusarium pseudograminearum CS3096]
Length = 179
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L YR+ G LK T+ ME+ +E +RKAV MLP+
Sbjct: 67 YVVVTNCAALHTTGRKKWQKPYYRHTTRPGSLKTVTMDVLMEQHGGSEVLRKAVSGMLPK 126
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 127 NRLRDKRLARLKAFEGDAHPY 147
>gi|358383724|gb|EHK21386.1| hypothetical protein TRIVIDRAFT_52684 [Trichoderma virens Gv29-8]
Length = 179
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK T+ ME+ +E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 96 GSLKTVTMDVLMEKHGGSEVLRKAVSGMLPKNRLRDKRLARLKAFEGEAHPY 147
>gi|295671763|ref|XP_002796428.1| mitochondrial 54S ribosomal protein YmL23 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283408|gb|EEH38974.1| 54S ribosomal protein L23 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 178
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV +L+ + Y + G LK T+ + E+ E +RKAV MLP+
Sbjct: 56 YVVAVGCHDLYTTGKKRFQKLYYTHNTRPGSLKSMTMDKMFEKWGGAEVLRKAVRGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPFGDRPLE---PYVMPPRRVRELRPRVRRAMIREQKKAE 115
N+LR+ R +L+ F G HP+ L+ V+ P+ P V+ A +E+ +E
Sbjct: 116 NRLREKRLARLKAFEGHAHPYKKNILKLGGKSVLGPQTSIADSPLVKEAFAKEKGVSE 173
>gi|297172126|gb|ADI23107.1| hypothetical protein [uncultured gamma proteobacterium
HF0770_09E07]
Length = 141
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRML 58
I +VV + + + E + +R+ G+ +K+ + K+Q+++DP + IR AV ML
Sbjct: 50 IGDFVVLVNAKKIEVTGNKAENKIYHRHTGYPGGIKKISFKDQLDKDPEKLIRDAVKGML 109
Query: 59 PRNKLRDDRDRKLRIFPGSEHP 80
P+N+L +KL+++ HP
Sbjct: 110 PKNRLNRQIIKKLKVYNDETHP 131
>gi|261492556|ref|ZP_05989109.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495723|ref|ZP_05992167.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452745271|ref|ZP_21945107.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype 6 str.
H23]
gi|261308635|gb|EEY09894.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311715|gb|EEY12865.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|452086664|gb|EME03051.1| 50S ribosomal protein L13 [Mannheimia haemolytica serotype 6 str.
H23]
Length = 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L + RKL+++ GSEH
Sbjct: 80 YVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGSEH 130
>gi|398339994|ref|ZP_10524697.1| 50S ribosomal protein L13 [Leptospira kirschneri serovar Bim str.
1051]
gi|418677262|ref|ZP_13238538.1| ribosomal protein L13 [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418686973|ref|ZP_13248136.1| ribosomal protein L13 [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418697417|ref|ZP_13258410.1| ribosomal protein L13 [Leptospira kirschneri str. H1]
gi|418741544|ref|ZP_13297918.1| ribosomal protein L13 [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089975|ref|ZP_15550776.1| ribosomal protein L13 [Leptospira kirschneri str. 200802841]
gi|421109210|ref|ZP_15569734.1| ribosomal protein L13 [Leptospira kirschneri str. H2]
gi|421130421|ref|ZP_15590615.1| ribosomal protein L13 [Leptospira kirschneri str. 2008720114]
gi|400322210|gb|EJO70068.1| ribosomal protein L13 [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|409954919|gb|EKO13867.1| ribosomal protein L13 [Leptospira kirschneri str. H1]
gi|410001238|gb|EKO51852.1| ribosomal protein L13 [Leptospira kirschneri str. 200802841]
gi|410005730|gb|EKO59517.1| ribosomal protein L13 [Leptospira kirschneri str. H2]
gi|410358120|gb|EKP05301.1| ribosomal protein L13 [Leptospira kirschneri str. 2008720114]
gi|410738369|gb|EKQ83104.1| ribosomal protein L13 [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410750992|gb|EKR07971.1| ribosomal protein L13 [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 149
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IFPG+EH
Sbjct: 86 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFPGAEH 137
>gi|39935834|ref|NP_948110.1| 50S ribosomal protein L13 [Rhodopseudomonas palustris CGA009]
gi|192291482|ref|YP_001992087.1| 50S ribosomal protein L13 [Rhodopseudomonas palustris TIE-1]
gi|316934072|ref|YP_004109054.1| 50S ribosomal protein L13 [Rhodopseudomonas palustris DX-1]
gi|81698179|sp|Q6N651.1|RL13_RHOPA RecName: Full=50S ribosomal protein L13; AltName: Full=RRP-L13
gi|226702900|sp|B3QKG3.1|RL13_RHOPT RecName: Full=50S ribosomal protein L13
gi|39649687|emb|CAE28209.1| ribosomal protein L13 [Rhodopseudomonas palustris CGA009]
gi|192285231|gb|ACF01612.1| ribosomal protein L13 [Rhodopseudomonas palustris TIE-1]
gi|315601786|gb|ADU44321.1| ribosomal protein L13 [Rhodopseudomonas palustris DX-1]
Length = 154
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KER+ K +E R P + KA+ RM+PR L + LR++PG+EHP
Sbjct: 80 FIGGIKERSAKAILEGRFPERVVEKAIERMIPRGPLGRVQMGNLRVYPGAEHP 132
>gi|322418345|ref|YP_004197568.1| 50S ribosomal protein L13 [Geobacter sp. M18]
gi|320124732|gb|ADW12292.1| ribosomal protein L13 [Geobacter sp. M18]
Length = 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE + + +++ P E ++KAV MLP+NKL +KL+I+ G HP
Sbjct: 80 YPGGLKEISAAKLIDKKPEELLKKAVKGMLPKNKLARHMLKKLKIYSGGTHP 131
>gi|72163013|ref|YP_290670.1| 50S ribosomal protein L13 [Thermobifida fusca YX]
gi|118573460|sp|Q47LM5.1|RL13_THEFY RecName: Full=50S ribosomal protein L13
gi|71916745|gb|AAZ56647.1| LSU ribosomal protein L13P [Thermobifida fusca YX]
Length = 149
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E +YR Y G L+ E M ++P A+ KAV MLP+N
Sbjct: 53 YVIVVNADKVVLTGKKLEQKRAYRHSGYPGGLRSIPYSELMAKNPARAVEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L +KL+++ G EHP + PY
Sbjct: 113 SLGRRMAKKLKVYAGPEHPHQAQKPVPY 140
>gi|307719789|ref|YP_003875321.1| 50S ribosomal protein L13 [Spirochaeta thermophila DSM 6192]
gi|386347885|ref|YP_006046134.1| 50S ribosomal protein L13 [Spirochaeta thermophila DSM 6578]
gi|306533514|gb|ADN03048.1| 50S ribosomal protein L13 [Spirochaeta thermophila DSM 6192]
gi|339412852|gb|AEJ62417.1| ribosomal protein L13 [Spirochaeta thermophila DSM 6578]
Length = 141
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 7 VFFILRNLFILSLNDEMS-VSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
V + + ++S N E + YR+ G+ LK T + ME+ PT + KA+ MLP+N+
Sbjct: 54 VIIVNADKIVVSGNKETKKLYYRHTGYPGGLKVATFSQVMEKHPTYPLEKAIKGMLPKNR 113
Query: 63 LRDDRDRKLRIFPGSEHP 80
L R+++I+ G HP
Sbjct: 114 LGRALFRRVKIYAGETHP 131
>gi|406913147|gb|EKD52613.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 145
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D++ S+ + G KE TL + E++P + I KAV MLP++K + R R+L++F +
Sbjct: 69 LTDKIYYSHSGFPGGFKEITLGQLKEKNPRKVIEKAVKGMLPKDKFQQTRLRRLKVFTDA 128
Query: 78 EHPF 81
HP+
Sbjct: 129 IHPY 132
>gi|297171836|gb|ADI22826.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0500_29K23]
Length = 124
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRML 58
I +VV + + + E + +R+ G+ +K+ + K+Q+++DP + IR AV ML
Sbjct: 33 IGDFVVLVNAKKIEVTGNKAENKIYHRHTGYPGGIKKISFKDQLDKDPEKLIRDAVKGML 92
Query: 59 PRNKLRDDRDRKLRIFPGSEHP 80
P+N+L +KL+++ HP
Sbjct: 93 PKNRLNRQIIKKLKVYNDETHP 114
>gi|302388746|ref|YP_003824567.1| 50S ribosomal protein L13 [Thermosediminibacter oceani DSM 16646]
gi|302199374|gb|ADL06944.1| LSU ribosomal protein L13P [Thermosediminibacter oceani DSM 16646]
Length = 144
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK T + ++R P +AI KAV MLP N L +KL+I+ G EHP
Sbjct: 80 YPGGLKAETYRHFLQRAPEKAIYKAVWGMLPHNSLGRRMIKKLKIYRGPEHP 131
>gi|291461081|ref|ZP_06026827.2| ribosomal protein L13 [Fusobacterium periodonticum ATCC 33693]
gi|358465654|ref|ZP_09175561.1| ribosomal protein L13 [Fusobacterium sp. oral taxon 370 str. F0437]
gi|291379072|gb|EFE86590.1| ribosomal protein L13 [Fusobacterium periodonticum ATCC 33693]
gi|357069833|gb|EHI79704.1| ribosomal protein L13 [Fusobacterium sp. oral taxon 370 str. F0437]
Length = 138
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + L + LND++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 49 YVVVTNVEKLVVTGKKLNDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 108
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 109 KLGRQQLTRLRVFVGTEH 126
>gi|291276766|ref|YP_003516538.1| 50S ribosomal protein L13 [Helicobacter mustelae 12198]
gi|290963960|emb|CBG39799.1| 50S ribosomal protein L13 [Helicobacter mustelae 12198]
Length = 141
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TLKE +E+ P + AV MLP+ L +KL+++ G+EHP
Sbjct: 81 YFGSTKSKTLKEMLEKSPEKLYYLAVRGMLPKTNLARSMIKKLKVYRGAEHP 132
>gi|212696761|ref|ZP_03304889.1| hypothetical protein ANHYDRO_01303 [Anaerococcus hydrogenalis DSM
7454]
gi|325846896|ref|ZP_08169753.1| ribosomal protein L13 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676260|gb|EEB35867.1| hypothetical protein ANHYDRO_01303 [Anaerococcus hydrogenalis DSM
7454]
gi|325481138|gb|EGC84182.1| ribosomal protein L13 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 146
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 8 FFILRNL--FILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+ I+ N +L+ N E Y+ Y G LK + K+ M++ P + AV+ MLP N
Sbjct: 56 YVIVVNAEKVVLTGNKEYQKEYKRYSGYAGGLKTISYKDMMDKHPERIVEHAVIGMLPHN 115
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL +KLR++ G H
Sbjct: 116 KLGRQMAKKLRVYVGENH 133
>gi|444319098|ref|XP_004180206.1| hypothetical protein TBLA_0D01790 [Tetrapisispora blattae CBS 6284]
gi|387513248|emb|CCH60687.1| hypothetical protein TBLA_0D01790 [Tetrapisispora blattae CBS 6284]
Length = 153
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 43 ERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
E+ E +RKAV MLPRN+LR R +L++F GSEHP+
Sbjct: 98 EKGYGEILRKAVHGMLPRNRLRKIRLERLKVFDGSEHPY 136
>gi|451940728|ref|YP_007461366.1| 50S ribosomal protein L13 [Bartonella australis Aust/NH1]
gi|451900115|gb|AGF74578.1| 50S ribosomal protein L13 [Bartonella australis Aust/NH1]
Length = 154
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P I KAV RM+PR L + + LR++ G++HP
Sbjct: 80 YIGGIKERTTRQILEGRFPERVIEKAVERMIPRGPLGRRQMKNLRVYAGNQHP 132
>gi|429195009|ref|ZP_19187066.1| ribosomal protein L13 [Streptomyces ipomoeae 91-03]
gi|428669295|gb|EKX68261.1| ribosomal protein L13 [Streptomyces ipomoeae 91-03]
Length = 162
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +AI KAV MLP+N
Sbjct: 68 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAIEKAVKGMLPKN 127
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +P+
Sbjct: 128 SLGRQMLSKLKVYKGDQHPHGAQQPQPF 155
>gi|354615736|ref|ZP_09033471.1| ribosomal protein L13 [Saccharomonospora paurometabolica YIM 90007]
gi|353219913|gb|EHB84416.1| ribosomal protein L13 [Saccharomonospora paurometabolica YIM 90007]
Length = 150
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++++ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKREQKFAYRHSGYPGGLRKQSFGELLDSRPVRLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G +HP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPDHPHAAQKPQPH 140
>gi|292493449|ref|YP_003528888.1| 50S ribosomal protein L13 [Nitrosococcus halophilus Nc4]
gi|291582044|gb|ADE16501.1| ribosomal protein L13 [Nitrosococcus halophilus Nc4]
Length = 142
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K TL++ +E+ P +AI AV MLP+N L RKL+++ G EHP
Sbjct: 80 YPGGIKSLTLEQLLEKAPEQAIEIAVKGMLPKNPLGRAMFRKLKVYRGGEHP 131
>gi|302524041|ref|ZP_07276383.1| ribosomal protein L13 [Streptomyces sp. AA4]
gi|302432936|gb|EFL04752.1| ribosomal protein L13 [Streptomyces sp. AA4]
Length = 150
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNAEKVALTGNKREQKFAYRHSGYPGGLRKRSFGELLDTKPEHLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G +HP
Sbjct: 113 KLGRAMAKKLKVYAGPQHP 131
>gi|424864684|ref|ZP_18288587.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86B]
gi|400759430|gb|EJP73612.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86B]
Length = 146
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +T +E E +P + I +AV MLP+NKL +KLR+F G +H G +P
Sbjct: 82 YPGGLKTKTFRELNETNPEKIIFEAVKGMLPKNKLNKSIIKKLRVFDGDDH--GHDAQQP 139
Query: 89 YVMPPR 94
P+
Sbjct: 140 IEWEPK 145
>gi|262197210|ref|YP_003268419.1| 50S ribosomal protein L13 [Haliangium ochraceum DSM 14365]
gi|262080557|gb|ACY16526.1| ribosomal protein L13 [Haliangium ochraceum DSM 14365]
Length = 149
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
+Y G L+ T ++ ++R P + IR AV MLP+N+L +KL++F G+EH G + +
Sbjct: 85 QYPGGLRSFTAEKLIQRHPEDLIRSAVRGMLPKNRLGRKMLKKLKVFAGTEHKHGAQEPK 144
Query: 88 PYVM 91
P +
Sbjct: 145 PLAL 148
>gi|366996266|ref|XP_003677896.1| hypothetical protein NCAS_0H02390 [Naumovozyma castellii CBS 4309]
gi|342303766|emb|CCC71549.1| hypothetical protein NCAS_0H02390 [Naumovozyma castellii CBS 4309]
Length = 164
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G L +T++ ++ + E +RKAV MLP+NKLR R +L++F GSEHP+ + L
Sbjct: 85 GSLNLQTMETVVQNKGYGEILRKAVSGMLPKNKLRKPRLERLKVFDGSEHPYKNNILAFA 144
Query: 90 VMPPRRV 96
P+ V
Sbjct: 145 YQQPQNV 151
>gi|89889404|ref|ZP_01200915.1| RplM, large ribosomal subunit protein L13 [Flavobacteria bacterium
BBFL7]
gi|89517677|gb|EAS20333.1| RplM, large ribosomal subunit protein L13 [Flavobacteria bacterium
BBFL7]
Length = 151
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T +E ++DPT + KAV MLP+NKL R L+++ G+EH
Sbjct: 85 YPGGQRSLTAQELYDKDPTRVVEKAVKGMLPKNKLGSAIFRNLKVYSGAEH 135
>gi|403251573|ref|ZP_10917906.1| ribosomal protein L13 [actinobacterium SCGC AAA027-L06]
gi|402915118|gb|EJX36108.1| ribosomal protein L13 [actinobacterium SCGC AAA027-L06]
Length = 151
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G + + E+ PT A+ KA+ MLP+N + KL+++ GSEHP
Sbjct: 80 YPGGMTSTVYSDMFEKFPTRAVEKAIKGMLPKNHVGRSAATKLKVYAGSEHP 131
>gi|39997967|ref|NP_953918.1| 50S ribosomal protein L13 [Geobacter sulfurreducens PCA]
gi|409913322|ref|YP_006891787.1| 50S ribosomal protein L13 [Geobacter sulfurreducens KN400]
gi|81701317|sp|Q748X4.1|RL13_GEOSL RecName: Full=50S ribosomal protein L13
gi|39984912|gb|AAR36268.1| ribosomal protein L13 [Geobacter sulfurreducens PCA]
gi|298506908|gb|ADI85631.1| ribosomal protein L13 [Geobacter sulfurreducens KN400]
Length = 143
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + + G +K T + +E+ P + IRKAV MLP+NKL +KL+++ G
Sbjct: 70 LADKMYYHHTGFPGGIKSITAGKLIEKKPEDLIRKAVKGMLPKNKLARHMLKKLKVYAGP 129
Query: 78 EHP 80
EHP
Sbjct: 130 EHP 132
>gi|256831857|ref|YP_003160584.1| 50S ribosomal protein L13 [Jonesia denitrificans DSM 20603]
gi|256685388|gb|ACV08281.1| ribosomal protein L13 [Jonesia denitrificans DSM 20603]
Length = 147
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L E ME++P A+ KAV M+P+ L ++ KLR++ GSEHP
Sbjct: 80 YPGGLTAVPYSELMEKNPERAVEKAVRGMIPKTSLGREQMTKLRVYAGSEHP 131
>gi|67983599|ref|XP_669176.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56482990|emb|CAI01166.1| hypothetical protein PB300108.00.0 [Plasmodium berghei]
Length = 151
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
GH K T K R+P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 74 GH-KILTCKTVFARNPSMILNLAVKRMLPNNRLRQIYYRKLFVYPGALHPHWGIP 127
>gi|294782013|ref|ZP_06747345.1| ribosomal protein L13 [Fusobacterium sp. 1_1_41FAA]
gi|294481824|gb|EFG29593.1| ribosomal protein L13 [Fusobacterium sp. 1_1_41FAA]
Length = 144
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + L + LND++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKLVVTGKKLNDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFVGTEH 132
>gi|220904335|ref|YP_002479647.1| 50S ribosomal protein L13 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254798494|sp|B8IZP2.1|RL13_DESDA RecName: Full=50S ribosomal protein L13
gi|219868634|gb|ACL48969.1| ribosomal protein L13 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 144
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
++G LK L + + P+ A+ AV MLP+N+L +KL+I+ G EHP + +P
Sbjct: 80 WVGGLKTTILGDVLADKPSRALMAAVKGMLPKNRLGRAMLKKLKIYAGPEHPHTAQNPQP 139
Query: 89 YVMP 92
+P
Sbjct: 140 LTLP 143
>gi|110633517|ref|YP_673725.1| 50S ribosomal protein L13 [Chelativorans sp. BNC1]
gi|118573414|sp|Q11J65.1|RL13_MESSB RecName: Full=50S ribosomal protein L13
gi|110284501|gb|ABG62560.1| LSU ribosomal protein L13P [Chelativorans sp. BNC1]
Length = 153
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++ GSEHP
Sbjct: 80 YAGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQMKNLRVYAGSEHP 132
>gi|375093468|ref|ZP_09739733.1| ribosomal protein L13, bacterial type [Saccharomonospora marina
XMU15]
gi|374654201|gb|EHR49034.1| ribosomal protein L13, bacterial type [Saccharomonospora marina
XMU15]
Length = 150
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L + +YR Y G L++R+ E ++ P + K V MLP+N
Sbjct: 53 FVIIVNADKVALTGNKRDQKFAYRHSGYPGGLRKRSFGELLDSRPERLVEKVVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEP 88
KL + +KL+++ G EHP + +P
Sbjct: 113 KLGRAQAKKLKVYAGPEHPHAAQQPQP 139
>gi|291523287|emb|CBK81580.1| LSU ribosomal protein L13P [Coprococcus catus GD/7]
Length = 144
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E+M + P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKEATLREKMAKKPEDVITLAVKGMLPKGPLGRAMIKKLHVYAGPEH 130
>gi|349687245|ref|ZP_08898387.1| 50S ribosomal protein L13 [Gluconacetobacter oboediens 174Bp2]
Length = 160
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+ +++ ++P + +RKAV RM+ R L+ + + L ++ GSEHP G +P
Sbjct: 81 YPGGIKERTITQRLTGKNPGDVVRKAVERMITRGPLQRAQMKHLYVYAGSEHPHEGQKP 139
>gi|227494576|ref|ZP_03924892.1| ribosomal protein L13 [Actinomyces coleocanis DSM 15436]
gi|226832310|gb|EEH64693.1| ribosomal protein L13 [Actinomyces coleocanis DSM 15436]
Length = 163
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+ G LK + +E M + P AI KAV MLP+N L + RKL+++ GSEHP
Sbjct: 96 FPGGLKAVSYRELMAKYPERAIEKAVRGMLPKNTLGRAQMRKLKVYRGSEHP 147
>gi|340753224|ref|ZP_08690014.1| 50S ribosomal protein L13 [Fusobacterium sp. 2_1_31]
gi|422315606|ref|ZP_16397037.1| ribosomal protein L13 [Fusobacterium periodonticum D10]
gi|229423833|gb|EEO38880.1| 50S ribosomal protein L13 [Fusobacterium sp. 2_1_31]
gi|404592239|gb|EKA94110.1| ribosomal protein L13 [Fusobacterium periodonticum D10]
Length = 144
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + L + LND++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKLVVTGKKLNDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFVGTEH 132
>gi|349701585|ref|ZP_08903214.1| 50S ribosomal protein L13 [Gluconacetobacter europaeus LMG 18494]
Length = 160
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+ +++ ++P + +RKAV RM+ R L+ + + L ++ GSEHP G +P
Sbjct: 81 YPGGIKERTITQRLTGKNPGDVVRKAVERMITRGPLQRAQMKHLYVYAGSEHPHEGQKP 139
>gi|367051048|ref|XP_003655903.1| mitochondrial 54S ribosomal protein YmL23 [Thielavia terrestris
NRRL 8126]
gi|347003167|gb|AEO69567.1| hypothetical protein THITE_2080723 [Thielavia terrestris NRRL 8126]
Length = 183
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 71 YVVVTNCAALYTTGKKKWRKTYYRHNTRPGSLRTITMDVLMEKFGGAEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 131 NRLRDKRLARLKAFEGDAHPY 151
>gi|406604824|emb|CCH43699.1| 50S ribosomal protein L13 [Wickerhamomyces ciferrii]
Length = 153
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 2 ISIYVVFFILRNLFILSLNDEMSVSYRYIGHLKERTL----KEQMERDPTEAIRKAVLRM 57
+ YVV ++L I + + +R+ G + + L K ++ E +RKAV M
Sbjct: 46 VGDYVVVTNCKDLKITGNKLKDKLYWRHSGKIGQLKLTPMDKVIHDKGYGEVLRKAVSGM 105
Query: 58 LPRNKLRDDRDRKLRIFPGSEHPF 81
LP+ KLR R +L++F GSEHP+
Sbjct: 106 LPKTKLRKARLERLKVFDGSEHPY 129
>gi|403049481|ref|ZP_10903965.1| 50S ribosomal protein L13 [SAR86 cluster bacterium SAR86D]
Length = 144
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK +T +E E+ P I +AV MLP+NKL +KL++F G EH
Sbjct: 80 YPGGLKTKTFREMNEKFPERIIEEAVKGMLPKNKLGKSMIKKLKVFSGPEH 130
>gi|70932631|ref|XP_737808.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513502|emb|CAH83368.1| hypothetical protein PC300468.00.0 [Plasmodium chabaudi chabaudi]
Length = 168
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
GH K T K R+P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 91 GH-KILTCKTVFARNPSMILNLAVKRMLPNNRLRQIYYRKLFVYPGALHPHWGIP 144
>gi|42561239|ref|NP_975690.1| 50S ribosomal protein L13 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|81697973|sp|Q6MSQ6.1|RL13_MYCMS RecName: Full=50S ribosomal protein L13
gi|42492737|emb|CAE77332.1| 50S RIBOSOMAL PROTEIN L13 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301320818|gb|ADK69461.1| ribosomal protein L13 [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 151
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G LK+R+++ Q E D T+ + +A+ MLP+N ++ R L +F GS HPF
Sbjct: 83 GGLKKRSVEVQRELDATKILERAIRLMLPKNVQGSNQYRALHVFKGSNHPFA 134
>gi|15602385|ref|NP_245457.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|378774225|ref|YP_005176468.1| 50S ribosomal protein L13 [Pasteurella multocida 36950]
gi|386834364|ref|YP_006239679.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. 3480]
gi|417855562|ref|ZP_12500668.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|421263252|ref|ZP_15714309.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|425063206|ref|ZP_18466331.1| LSU ribosomal protein L13p (L13Ae) [Pasteurella multocida subsp.
gallicida X73]
gi|425065305|ref|ZP_18468425.1| LSU ribosomal protein L13p (L13Ae) [Pasteurella multocida subsp.
gallicida P1059]
gi|81783296|sp|Q9CNB2.1|RL13_PASMU RecName: Full=50S ribosomal protein L13
gi|12720781|gb|AAK02604.1| RpL13 [Pasteurella multocida subsp. multocida str. Pm70]
gi|338215918|gb|EGP02130.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|356596773|gb|AET15499.1| 50S ribosomal protein L13 [Pasteurella multocida 36950]
gi|385201065|gb|AFI45920.1| ribosomal protein L13 [Pasteurella multocida subsp. multocida str.
3480]
gi|401689762|gb|EJS85139.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|404382769|gb|EJZ79226.1| LSU ribosomal protein L13p (L13Ae) [Pasteurella multocida subsp.
gallicida X73]
gi|404384169|gb|EJZ80612.1| LSU ribosomal protein L13p (L13Ae) [Pasteurella multocida subsp.
gallicida P1059]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMYRKLKVYAGSEH 130
>gi|367002001|ref|XP_003685735.1| mitochondrial 54S ribosomal protein YmL23 [Tetrapisispora phaffii
CBS 4417]
gi|357524034|emb|CCE63301.1| hypothetical protein TPHA_0E02090 [Tetrapisispora phaffii CBS 4417]
Length = 164
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQM-ERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GHLK +++ + ++ E ++KAV MLP+N+LR R +L+IF GSEHP+
Sbjct: 85 GHLKLVPMEKLIADKGTKEVLKKAVSGMLPKNRLRKIRLERLKIFDGSEHPY 136
>gi|260887841|ref|ZP_05899104.1| ribosomal protein L13 [Selenomonas sputigena ATCC 35185]
gi|330838593|ref|YP_004413173.1| 50S ribosomal protein L13 [Selenomonas sputigena ATCC 35185]
gi|260862447|gb|EEX76947.1| ribosomal protein L13 [Selenomonas sputigena ATCC 35185]
gi|329746357|gb|AEB99713.1| ribosomal protein L13 [Selenomonas sputigena ATCC 35185]
Length = 146
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 15 FILSLNDEMSV----------SYRYIGHLKERTLKEQ---MERDPTEAIRKAVLRMLPRN 61
F++ +N E +V +R+ G+ T ME P + I KAV MLP+N
Sbjct: 54 FVIVINAEKAVFTGKKLTDKMYFRHSGYPGGTTFTAAGKLMENAPEKVIEKAVRGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEHP 80
+L RKL ++ GSEHP
Sbjct: 114 RLGAQMYRKLNVYAGSEHP 132
>gi|170717444|ref|YP_001784543.1| 50S ribosomal protein L13 [Haemophilus somnus 2336]
gi|189041006|sp|B0UTU4.1|RL13_HAES2 RecName: Full=50S ribosomal protein L13
gi|168825573|gb|ACA30944.1| ribosomal protein L13 [Haemophilus somnus 2336]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGSEH 130
>gi|398405776|ref|XP_003854354.1| mitochondrial ribosomal protein L13 [Zymoseptoria tritici IPO323]
gi|339474237|gb|EGP89330.1| hypothetical protein MYCGRDRAFT_103797 [Zymoseptoria tritici
IPO323]
Length = 174
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G LKE T+ + M + E +R+AV MLP+N+LRD+R +L+ F G HP+ L+
Sbjct: 85 GSLKEITMDKMMAKWGGGEVLRRAVRGMLPKNRLRDERMARLKCFEGLVHPYKQNLLQ-- 142
Query: 90 VMPPRRVRELRPRVRRAMIREQKKAEMQQSN 120
P + +L P V +A ++ QK + S+
Sbjct: 143 -TPTTNIAQL-PEV-QATLQGQKTFDSSSSS 170
>gi|150020924|ref|YP_001306278.1| 50S ribosomal protein L13 [Thermosipho melanesiensis BI429]
gi|149793445|gb|ABR30893.1| ribosomal protein L13 [Thermosipho melanesiensis BI429]
Length = 163
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G +KE + K+ ++R+P + I+ AV RMLP+ L ++L+I+ GSEHP +P+E
Sbjct: 101 YPGGIKEFSAKQLLQRNPEKLIQLAVKRMLPKTILGRRALKRLKIYAGSEHPHQAQKPVE 160
>gi|451996624|gb|EMD89090.1| hypothetical protein COCHEDRAFT_1180304 [Cochliobolus
heterostrophus C5]
Length = 175
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
G LKE ++ + M + E +RKAV MLP+N+LR +R +L+ F G HP+G+
Sbjct: 85 GSLKELSMDKLMAKWGGGEVLRKAVSGMLPKNRLRKERLARLKTFEGRAHPYGE 138
>gi|260914123|ref|ZP_05920596.1| 50S ribosomal protein L13 [Pasteurella dagmatis ATCC 43325]
gi|260631756|gb|EEX49934.1| 50S ribosomal protein L13 [Pasteurella dagmatis ATCC 43325]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMYRKLKVYAGSEH 130
>gi|113460895|ref|YP_718962.1| 50S ribosomal protein L13 [Haemophilus somnus 129PT]
gi|118573405|sp|Q0I2N3.1|RL13_HAES1 RecName: Full=50S ribosomal protein L13
gi|112822938|gb|ABI25027.1| LSU ribosomal protein L13P [Haemophilus somnus 129PT]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGSEH 130
>gi|119477353|ref|ZP_01617544.1| 50S ribosomal protein L13 [marine gamma proteobacterium HTCC2143]
gi|119449279|gb|EAW30518.1| 50S ribosomal protein L13 [marine gamma proteobacterium HTCC2143]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIG LK + ++Q+E+ P + AV MLP N L +KL++F GSEH
Sbjct: 80 YIGSLKSISFEKQIEKAPERVLHTAVKGMLPHNPLGRTMLKKLKVFAGSEH 130
>gi|217077380|ref|YP_002335098.1| 50S ribosomal protein L13 [Thermosipho africanus TCF52B]
gi|226705044|sp|B7ICN0.1|RL13_THEAB RecName: Full=50S ribosomal protein L13
gi|217037235|gb|ACJ75757.1| ribosomal protein L13 [Thermosipho africanus TCF52B]
Length = 149
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G +KE T ++ +R+P + I+ AV RMLP+ L ++L+I+ GSEHP +P+E
Sbjct: 87 YPGGIKEFTARQLQQRNPEKLIQLAVKRMLPKTILGRKALKRLKIYAGSEHPHSAQKPIE 146
>gi|119963410|ref|YP_948614.1| 50S ribosomal protein L13 [Arthrobacter aurescens TC1]
gi|403528092|ref|YP_006662979.1| 50S ribosomal protein L13 [Arthrobacter sp. Rue61a]
gi|166230957|sp|A1R8Q2.1|RL13_ARTAT RecName: Full=50S ribosomal protein L13
gi|119950269|gb|ABM09180.1| ribosomal protein L13 [Arthrobacter aurescens TC1]
gi|403230519|gb|AFR29941.1| 50S ribosomal protein L13 [Arthrobacter sp. Rue61a]
Length = 147
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E +P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLTSVNYAELLESNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G EHP
Sbjct: 113 SLAAQQLGKLKVYAGPEHP 131
>gi|378734108|gb|EHY60567.1| 50S ribosomal protein L13 [Exophiala dermatitidis NIH/UT8656]
Length = 167
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILS---LNDEMSVSYRYIGHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV N+ + L + G LK+ ++ +E+ E +++AV MLP+
Sbjct: 56 YVVATGCHNIHVTGKKRLQKQYYTHNTRPGSLKQMSMDRMIEKWGGGEVLKRAVRGMLPK 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L++F GS HP+
Sbjct: 116 NRLRDKRLARLKVFEGSAHPY 136
>gi|392373744|ref|YP_003205577.1| 50S ribosomal protein L13 [Candidatus Methylomirabilis oxyfera]
gi|258591437|emb|CBE67738.1| 50S ribosomal subunit protein L13 [Candidatus Methylomirabilis
oxyfera]
Length = 149
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L T ++ + PT + AV MLPR KL D RKL+++ G HP + P
Sbjct: 81 YPGGLTTTTAEQMFKSHPTRVLEAAVRGMLPRTKLGDALFRKLKVYAGPTHPHASQQPIP 140
Query: 89 YV 90
+V
Sbjct: 141 FV 142
>gi|302891865|ref|XP_003044814.1| mitochondrial 54S ribosomal protein YmL23 [Nectria haematococca
mpVI 77-13-4]
gi|256725739|gb|EEU39101.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 179
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L YR+ G LK T+ ME+ +E +RKAV MLP+
Sbjct: 67 YVVVTNCAALHTTGRKKWQKPYYRHTTRPGSLKTVTMDVLMEQHGGSEVLRKAVRGMLPK 126
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 127 NRLRDKRLARLKAFEGEAHPY 147
>gi|70947086|ref|XP_743192.1| Ribosomal protein L13 [Plasmodium chabaudi chabaudi]
gi|56522573|emb|CAH77708.1| Ribosomal protein L13, putative [Plasmodium chabaudi chabaudi]
Length = 212
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
GH K T K R+P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 135 GH-KILTCKTVFARNPSMILNLAVKRMLPNNRLRQIYYRKLFVYPGALHPHWGIP 188
>gi|417853137|ref|ZP_12498559.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338215420|gb|EGP01697.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMYRKLKVYAGSEH 130
>gi|402851468|ref|ZP_10899624.1| LSU ribosomal protein L13p (L13Ae) [Rhodovulum sp. PH10]
gi|402498296|gb|EJW10052.1| LSU ribosomal protein L13p (L13Ae) [Rhodovulum sp. PH10]
Length = 153
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KER+ K ME R P + KAV RMLPR L + LR++ G EHP
Sbjct: 80 YIGGIKERSAKAIMEGRFPERIVEKAVQRMLPRGPLGRQQLGNLRVYRGPEHP 132
>gi|347761329|ref|YP_004868890.1| 50S ribosomal protein L13 [Gluconacetobacter xylinus NBRC 3288]
gi|347580299|dbj|BAK84520.1| LSU ribosomal protein L13P [Gluconacetobacter xylinus NBRC 3288]
Length = 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+ +++ ++P +RKAV RM+ R L+ + + L ++ GSEHP G +P
Sbjct: 81 YPGGIKERTITQRLTGKNPGHVVRKAVERMITRGPLQRAQMKHLYVYAGSEHPHEGQKP 139
>gi|379707156|ref|YP_005262361.1| 50S ribosomal subunit protein L13 (modular protein) [Nocardia
cyriacigeorgica GUH-2]
gi|374844655|emb|CCF61719.1| 50S ribosomal subunit protein L13 (modular protein) [Nocardia
cyriacigeorgica GUH-2]
Length = 137
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S + + GH LK RT+ + +E P + KAV M+P+N
Sbjct: 43 FVIIINADKVAISGNKKQDKLIHHHSGHPGGLKSRTVGQVLESRPDRLVEKAVKGMIPKN 102
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + KL+++ G HP + P+
Sbjct: 103 KLGNAIAGKLKVYAGPNHPHAAQQPVPF 130
>gi|333996049|ref|YP_004528662.1| 50S ribosomal protein L13 [Treponema azotonutricium ZAS-9]
gi|333736613|gb|AEF82562.1| ribosomal protein L13 [Treponema azotonutricium ZAS-9]
Length = 168
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G LK T ++ +ER P + AV MLP+ L + ++++PG+EHP
Sbjct: 105 YVGGLKTVTYEKLLERHPCSPLELAVKGMLPKGPLGRKLENNVKVYPGAEHP 156
>gi|4929425|gb|AAD33988.1|AF147722_1 ribosomal protein L23 [Kluyveromyces lactis]
Length = 155
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK T+++ + + +E ++KAV M P+NK R R +L+IF GSEHP+
Sbjct: 85 GSLKLTTMEDMISNKGYSEVLKKAVSGMTPKNKTRKIRTARLKIFDGSEHPY 136
>gi|377560621|ref|ZP_09790116.1| 50S ribosomal protein L13 [Gordonia otitidis NBRC 100426]
gi|377566442|ref|ZP_09795701.1| 50S ribosomal protein L13 [Gordonia sputi NBRC 100414]
gi|441508830|ref|ZP_20990753.1| 50S ribosomal protein L13 [Gordonia aichiensis NBRC 108223]
gi|377522235|dbj|GAB35281.1| 50S ribosomal protein L13 [Gordonia otitidis NBRC 100426]
gi|377526375|dbj|GAB40866.1| 50S ribosomal protein L13 [Gordonia sputi NBRC 100414]
gi|441447271|dbj|GAC48714.1| 50S ribosomal protein L13 [Gordonia aichiensis NBRC 108223]
Length = 147
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + S + ++YR+ GH LK +T E +E P + KA+ MLP
Sbjct: 53 FVIIINAEKVALTSNKADRKLNYRHSGHPGGLKVQTTAELLESHPERVVEKAITGMLPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|344204932|ref|YP_004790074.1| 50S ribosomal protein L13 [Mycoplasma putrefaciens KS1]
gi|343956855|gb|AEM68570.1| ribosomal protein L13 [Mycoplasma putrefaciens KS1]
Length = 151
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
V YR Y G LK RT+ Q + DPT+ + +++ MLP+N ++ R L +F G EHP+
Sbjct: 74 VYYRHSMYPGGLKRRTVAVQRQLDPTKILERSIRLMLPKNVQGANQFRALHVFKGPEHPY 133
>gi|330990988|ref|ZP_08314942.1| 50S ribosomal protein L13 [Gluconacetobacter sp. SXCC-1]
gi|329761809|gb|EGG78299.1| 50S ribosomal protein L13 [Gluconacetobacter sp. SXCC-1]
Length = 160
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+ +++ ++P +RKAV RM+ R L+ + + L ++ GSEHP G +P
Sbjct: 81 YPGGIKERTITQRLTGKNPGHVVRKAVERMITRGPLQRAQMKHLYVYAGSEHPHEGQKP 139
>gi|400985|sp|P31781.1|RL13_HAESO RecName: Full=50S ribosomal protein L13
gi|7240280|gb|AAB20820.2| ribosomal protein L13 homolog [Histophilus somni]
Length = 142
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGSEH 130
>gi|400294089|ref|ZP_10795906.1| ribosomal protein L13 [Actinomyces naeslundii str. Howell 279]
gi|399900808|gb|EJN83746.1| ribosomal protein L13 [Actinomyces naeslundii str. Howell 279]
Length = 147
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + +YR+ GH L + +E + P A+ KA+ M+P
Sbjct: 53 YVVIINADKVALTNGKADKKFAYRHSGHPGGLTAVSYRELLATRPERAVEKAIKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G+EHP + +P+
Sbjct: 113 KLGRAQLKKLKVYAGAEHPHASQNPKPF 140
>gi|283796508|ref|ZP_06345661.1| ribosomal protein L13 [Clostridium sp. M62/1]
gi|291075922|gb|EFE13286.1| ribosomal protein L13 [Clostridium sp. M62/1]
gi|295092588|emb|CBK78695.1| LSU ribosomal protein L13P [Clostridium cf. saccharolyticum K10]
gi|295115246|emb|CBL36093.1| LSU ribosomal protein L13P [butyrate-producing bacterium SM4/1]
Length = 144
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TLKE M + P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMRETTLKEMMAKKPEKVIELAVKGMLPKGPLGRSMIKKLHVYAGPEH 130
>gi|116620036|ref|YP_822192.1| 50S ribosomal protein L13 [Candidatus Solibacter usitatus
Ellin6076]
gi|122255563|sp|Q02AK9.1|RL13_SOLUE RecName: Full=50S ribosomal protein L13
gi|116223198|gb|ABJ81907.1| LSU ribosomal protein L13P [Candidatus Solibacter usitatus
Ellin6076]
Length = 143
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L E++LK PT + A+ MLP+NKL RKL ++ GS+HP
Sbjct: 80 YPGGLVEKSLKRVRAEKPTRIVEDAIAGMLPKNKLGKQMYRKLNVYAGSKHP 131
>gi|435856177|ref|YP_007317016.1| 50S ribosomal protein L13 (chloroplast) [Nannochloropsis gaditana]
gi|429126101|gb|AFZ64272.1| 50S ribosomal protein L13 (chloroplast) [Nannochloropsis gaditana]
Length = 145
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G LK R+L E + R P I AV RMLP + D ++LR++ G+EHP
Sbjct: 83 GELKTRSLAELLSRFPYRVIELAVKRMLPNGFEKSDLAKRLRVYAGNEHP 132
>gi|359778550|ref|ZP_09281819.1| 50S ribosomal protein L13 [Arthrobacter globiformis NBRC 12137]
gi|359304467|dbj|GAB15648.1| 50S ribosomal protein L13 [Arthrobacter globiformis NBRC 12137]
Length = 147
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E +P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLTSVNYAELLESNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLSKLKVYRGAEHP 131
>gi|269122813|ref|YP_003305390.1| 50S ribosomal protein L13 [Streptobacillus moniliformis DSM 12112]
gi|268314139|gb|ACZ00513.1| ribosomal protein L13 [Streptobacillus moniliformis DSM 12112]
Length = 144
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
G LK R+L+E + + PTE +RKAV RMLP+NKL +L++ G H
Sbjct: 84 GGLKTRSLEEMLAKKPTEVLRKAVERMLPKNKLGRQMINRLKLNVGPTH 132
>gi|451847556|gb|EMD60863.1| hypothetical protein COCSADRAFT_163289 [Cochliobolus sativus
ND90Pr]
Length = 175
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
G LKE ++ + M + E +RKAV MLP+N+LR +R +L+ F G HP+G+
Sbjct: 85 GSLKELSMDKLMAKWGGGEVLRKAVSGMLPKNRLRKERLARLKTFEGRAHPYGE 138
>gi|325964108|ref|YP_004242014.1| 50S ribosomal protein L13 [Arthrobacter phenanthrenivorans Sphe3]
gi|444307010|ref|ZP_21142760.1| 50S ribosomal protein L13 [Arthrobacter sp. SJCon]
gi|323470195|gb|ADX73880.1| LSU ribosomal protein L13P [Arthrobacter phenanthrenivorans Sphe3]
gi|443480640|gb|ELT43585.1| 50S ribosomal protein L13 [Arthrobacter sp. SJCon]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E +P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLTSVNYAELLESNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLGKLKVYRGAEHP 131
>gi|91977178|ref|YP_569837.1| 50S ribosomal protein L13 [Rhodopseudomonas palustris BisB5]
gi|118573439|sp|Q136Q3.1|RL13_RHOPS RecName: Full=50S ribosomal protein L13
gi|91683634|gb|ABE39936.1| LSU ribosomal protein L13P [Rhodopseudomonas palustris BisB5]
Length = 154
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
+IG +KERT K +E R P + KAV RM+PR L + LR++ G+EHP + E
Sbjct: 80 FIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRVQMGNLRVYGGAEHPHEAQQPE 139
Query: 88 P 88
P
Sbjct: 140 P 140
>gi|395782087|ref|ZP_10462494.1| 50S ribosomal protein L13 [Bartonella rattimassiliensis 15908]
gi|395419762|gb|EJF86054.1| 50S ribosomal protein L13 [Bartonella rattimassiliensis 15908]
Length = 154
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + + LR++ G++HP
Sbjct: 80 YIGGIKERTARQLLEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGNQHP 132
>gi|418021101|ref|ZP_12660247.1| ribosomal protein L13, bacterial type [Candidatus Regiella
insecticola R5.15]
gi|347603541|gb|EGY28360.1| ribosomal protein L13, bacterial type [Candidatus Regiella
insecticola R5.15]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIG LK+ T +E + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YIGGLKQTTFEEMIARHPERVIENAVKGMLPKGPLGRAMYRKLKVYAGNEH 130
>gi|302799198|ref|XP_002981358.1| hypothetical protein SELMODRAFT_7664 [Selaginella moellendorffii]
gi|300150898|gb|EFJ17546.1| hypothetical protein SELMODRAFT_7664 [Selaginella moellendorffii]
Length = 132
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
G LKE T +R P + AV MLP+N+L RKL++F G +HP G + EP
Sbjct: 72 GGLKEETFDHLQKRIPERIVEHAVRGMLPKNRLGRAMFRKLKVFKGGDHPHGAQKPEP 129
>gi|225570895|ref|ZP_03779918.1| hypothetical protein CLOHYLEM_06999 [Clostridium hylemonae DSM
15053]
gi|225160357|gb|EEG72976.1| hypothetical protein CLOHYLEM_06999 [Clostridium hylemonae DSM
15053]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ +++ + E + Y Y+G KE TL E M++ P + I AV MLP+
Sbjct: 53 YVIVVNAKDIKVTGKKMEQKMYYNHSDYVGGFKETTLAEMMDKKPEKVIELAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L +KL ++ G EH
Sbjct: 113 PLGRAMIKKLHVYAGPEH 130
>gi|220913376|ref|YP_002488685.1| 50S ribosomal protein L13 [Arthrobacter chlorophenolicus A6]
gi|254798476|sp|B8HCI0.1|RL13_ARTCA RecName: Full=50S ribosomal protein L13
gi|219860254|gb|ACL40596.1| ribosomal protein L13 [Arthrobacter chlorophenolicus A6]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E +P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLTSVNYAELLESNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLGKLKVYRGAEHP 131
>gi|325663615|ref|ZP_08152022.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331087126|ref|ZP_08336199.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470301|gb|EGC73533.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409215|gb|EGG88666.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E M++ P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLREMMDKKPEKVIELAVKGMLPKGPLGRSMIKKLHVYAGPEH 130
>gi|410479869|ref|YP_006767506.1| 50S ribosomal protein L13 [Leptospirillum ferriphilum ML-04]
gi|424867593|ref|ZP_18291375.1| Ribosomal protein L13 [Leptospirillum sp. Group II 'C75']
gi|124516669|gb|EAY58177.1| ribosomal protein L13 [Leptospirillum rubarum]
gi|387221905|gb|EIJ76412.1| Ribosomal protein L13 [Leptospirillum sp. Group II 'C75']
gi|406775121|gb|AFS54546.1| ribosomal protein L13 [Leptospirillum ferriphilum ML-04]
Length = 151
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G KE K+ +ER P + +V MLP+NKL +LR+FPGSEH
Sbjct: 83 YPGGFKEERAKDVLERKPETILTHSVKGMLPKNKLAKLYMTRLRVFPGSEH 133
>gi|229815874|ref|ZP_04446198.1| hypothetical protein COLINT_02930 [Collinsella intestinalis DSM
13280]
gi|229808569|gb|EEP44347.1| hypothetical protein COLINT_02930 [Collinsella intestinalis DSM
13280]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + ++ ME+ P + I +AV MLP+ L + KL+++ G+EHP
Sbjct: 83 YNGGLKAESFRQAMEKHPEKVIERAVRGMLPKTTLGRKQLTKLKVYAGTEHP 134
>gi|219849857|ref|YP_002464290.1| 50S ribosomal protein L13 [Chloroflexus aggregans DSM 9485]
gi|254798488|sp|B8G6P5.1|RL13_CHLAD RecName: Full=50S ribosomal protein L13
gi|219544116|gb|ACL25854.1| ribosomal protein L13 [Chloroflexus aggregans DSM 9485]
Length = 143
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + + E + YR Y G LKE K + + P +R AV RMLP+N
Sbjct: 53 FVIVVNAEKIVLTGRKPEQKIYYRHSGYPGGLKEIPYKMMLAKHPERILRLAVKRMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPYV 90
++ KLRI+ G HP + +PY+
Sbjct: 113 RMGRRLLSKLRIYAGPNHPHAAQQPKPYI 141
>gi|374611538|ref|ZP_09684324.1| ribosomal protein L13 [Mycobacterium tusciae JS617]
gi|373549248|gb|EHP75921.1| ribosomal protein L13 [Mycobacterium tusciae JS617]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR+ G L+ R L ++ME+ + KA+L M+P
Sbjct: 53 FVIVINADKIAISGDKLTKKFAYRHSGFPGGLRARALGDEMEKHADRVVEKAILGMIPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G +HP + PY
Sbjct: 113 KLGHQIQKKLKVYVGPDHPHTAQQPIPY 140
>gi|355574727|ref|ZP_09044363.1| 50S ribosomal protein L13 [Olsenella sp. oral taxon 809 str. F0356]
gi|354818203|gb|EHF02695.1| 50S ribosomal protein L13 [Olsenella sp. oral taxon 809 str. F0356]
Length = 145
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRY---IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + + E +RY +G LK + KE M + P + A+ MLP+
Sbjct: 54 FVVVINADKVQLTGVKAEHKSYWRYSGWLGGLKTESFKEAMAKHPERVVEHAIKGMLPKT 113
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G EHP
Sbjct: 114 TLGRQQGMKLKVYAGPEHP 132
>gi|304413244|ref|ZP_07394717.1| 50S ribosomal subunit protein L13 [Candidatus Regiella insecticola
LSR1]
gi|304284087|gb|EFL92480.1| 50S ribosomal subunit protein L13 [Candidatus Regiella insecticola
LSR1]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIG LK+ T +E + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 85 YIGGLKQTTFEEMIARHPERVIENAVKGMLPKGPLGRAMYRKLKVYAGNEH 135
>gi|162134981|ref|YP_781774.2| 50S ribosomal protein L13 [Rhodopseudomonas palustris BisA53]
Length = 154
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
YIG +KER+ K +E R P + KAV RM+PR L + LR++ G EHP + E
Sbjct: 80 YIGGIKERSAKSILEGRFPERVVEKAVERMVPRGPLGRQQMSNLRVYGGPEHPHEAQQPE 139
Query: 88 P 88
P
Sbjct: 140 P 140
>gi|323483247|ref|ZP_08088637.1| 50S ribosomal protein L13 [Clostridium symbiosum WAL-14163]
gi|323691257|ref|ZP_08105532.1| 50S ribosomal protein L13 [Clostridium symbiosum WAL-14673]
gi|355626476|ref|ZP_09048751.1| 50S ribosomal protein L13 [Clostridium sp. 7_3_54FAA]
gi|323403345|gb|EGA95653.1| 50S ribosomal protein L13 [Clostridium symbiosum WAL-14163]
gi|323504597|gb|EGB20384.1| 50S ribosomal protein L13 [Clostridium symbiosum WAL-14673]
gi|354820796|gb|EHF05201.1| 50S ribosomal protein L13 [Clostridium sp. 7_3_54FAA]
Length = 144
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ N+ + + + Y Y+G ++E TLKE M + P + I AV MLP+
Sbjct: 53 YVIVVNAENIKVTGKKLDQKIYYNHSDYVGGMRETTLKEMMAKKPEKVIELAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L KL ++ G EH
Sbjct: 113 PLGRSMLTKLHVYAGPEH 130
>gi|302772659|ref|XP_002969747.1| hypothetical protein SELMODRAFT_7665 [Selaginella moellendorffii]
gi|300162258|gb|EFJ28871.1| hypothetical protein SELMODRAFT_7665 [Selaginella moellendorffii]
Length = 132
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
G LKE T +R P + AV MLP+N+L RKL++F G +HP G + EP
Sbjct: 72 GGLKEETFDHLQKRIPERIVEHAVRGMLPKNRLGRAMFRKLKVFKGGDHPHGAQKPEP 129
>gi|108768521|gb|ABG07243.1| LSU ribosomal protein L13P [Mycobacterium sp. MCS]
gi|119693287|gb|ABL90360.1| LSU ribosomal protein L13P [Mycobacterium sp. KMS]
gi|126233560|gb|ABN96960.1| LSU ribosomal protein L13P [Mycobacterium sp. JLS]
Length = 153
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 15 FILSLNDE-MSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N E ++VS YR Y G L+ RT+ E + + PT + A++ MLP
Sbjct: 59 FVIVINAEKIAVSGDKLNNKYAYRHSGYPGGLRRRTIGELLIKHPTRVVENAIVGMLPHT 118
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G HP
Sbjct: 119 KLSRQVQKKLKVYAGPNHP 137
>gi|414162376|ref|ZP_11418623.1| 50S ribosomal protein L13 [Afipia felis ATCC 53690]
gi|410880156|gb|EKS27996.1| 50S ribosomal protein L13 [Afipia felis ATCC 53690]
Length = 154
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KERT K +E R P + KAV RM+PR L + LR++ G+EHP
Sbjct: 80 FIGGIKERTAKSILEGRFPERVVEKAVERMIPRGPLGRIQMGNLRVYAGAEHP 132
>gi|406931133|gb|EKD66444.1| 50S ribosomal protein L13 [uncultured bacterium (gcode 4)]
Length = 143
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
+IG +KE + PTEA++ A+ MLP+NKLRD +L++ GS H +
Sbjct: 81 FIGWIKEINFNTLKAKKPTEALKLAISGMLPKNKLRDGMLDRLKLELGSTHKY 133
>gi|116671464|ref|YP_832397.1| 50S ribosomal protein L13 [Arthrobacter sp. FB24]
gi|166230958|sp|A0JZ27.1|RL13_ARTS2 RecName: Full=50S ribosomal protein L13
gi|116611573|gb|ABK04297.1| LSU ribosomal protein L13P [Arthrobacter sp. FB24]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E +P A+ KA+ MLP+N
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLTSVNYAELLESNPVRAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLGKLKVYRGAEHP 131
>gi|15838138|ref|NP_298826.1| 50S ribosomal protein L13 [Xylella fastidiosa 9a5c]
gi|81788811|sp|Q9PD42.1|RL13_XYLFA RecName: Full=50S ribosomal protein L13
gi|9106575|gb|AAF84346.1|AE003983_8 50S ribosomal protein L13 [Xylella fastidiosa 9a5c]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK +L + ++R P + AV MLP+ L RKL+++ GS+HP
Sbjct: 80 YVGNLKSESLGQALQRHPERVLEIAVKGMLPKGPLGRAMYRKLKVYTGSKHP 131
>gi|315918249|ref|ZP_07914489.1| LSU ribosomal protein L13P [Fusobacterium gonidiaformans ATCC
25563]
gi|317059820|ref|ZP_07924305.1| LSU ribosomal protein L13P [Fusobacterium sp. 3_1_5R]
gi|313685496|gb|EFS22331.1| LSU ribosomal protein L13P [Fusobacterium sp. 3_1_5R]
gi|313692124|gb|EFS28959.1| LSU ribosomal protein L13P [Fusobacterium gonidiaformans ATCC
25563]
Length = 138
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRYIGH------LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N+ + + + +Y H ++ER L E +++ P E + AV RMLP+N
Sbjct: 49 FVVVTNVAKMVVTGKKLTDKKYYNHSGFPGGIRERKLGEILDKRPEELLMLAVKRMLPKN 108
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL ++ +LR+F G+EH
Sbjct: 109 KLGREQLTRLRVFAGAEH 126
>gi|340755319|ref|ZP_08692009.1| 50S ribosomal protein L13 [Fusobacterium sp. D12]
gi|419841086|ref|ZP_14364464.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500259|ref|ZP_15947270.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|340573494|gb|EFS23980.2| 50S ribosomal protein L13 [Fusobacterium sp. D12]
gi|386906105|gb|EIJ70850.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402268673|gb|EJU18039.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 144
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRYIGH------LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N+ + + + +Y H ++ER L E +++ P E + AV RMLP+N
Sbjct: 55 FVVVTNVAKMVVTGKKLTDKKYYNHSGFPGGIRERKLGEILDKRPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL ++ +LR+F G+EH
Sbjct: 115 KLGREQLTRLRVFAGAEH 132
>gi|153809626|ref|ZP_01962294.1| hypothetical protein RUMOBE_00007 [Ruminococcus obeum ATCC 29174]
gi|149833804|gb|EDM88884.1| ribosomal protein L13 [Ruminococcus obeum ATCC 29174]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE M + P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMMAKKPEKVIELAVKGMLPKGPLGRTMYKKLFVYAGPEH 130
>gi|340778079|ref|ZP_08698022.1| 50S ribosomal protein L13 [Acetobacter aceti NBRC 14818]
Length = 159
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPL 86
Y G +K+RT+ +++ + P E + KAV RM+ R L+ + R L ++ GSEHP G +P+
Sbjct: 81 YPGGIKQRTITQRLNGKHPGEVVEKAVERMITRGPLQRAQMRNLHVYAGSEHPHDGQQPV 140
Query: 87 E 87
+
Sbjct: 141 K 141
>gi|163816011|ref|ZP_02207381.1| hypothetical protein COPEUT_02191 [Coprococcus eutactus ATCC 27759]
gi|158448821|gb|EDP25816.1| ribosomal protein L13 [Coprococcus eutactus ATCC 27759]
gi|295093667|emb|CBK82758.1| LSU ribosomal protein L13P [Coprococcus sp. ART55/1]
Length = 144
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E+M + P + I AV MLP+ L + KL ++ G++H
Sbjct: 80 YVGGMKETTLREKMAKKPEDVIYLAVKGMLPKGPLGREMITKLHVYAGADH 130
>gi|428176492|gb|EKX45376.1| hypothetical protein GUITHDRAFT_71349 [Guillardia theta CCMP2712]
Length = 183
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L E + ++ P E IR+A+ MLP+N LR +R + LR+F SEHP
Sbjct: 92 YPGGLVETPYMKMLKEKPEEVIRRAISGMLPKNNLRKERMKLLRVFRTSEHP 143
>gi|381395460|ref|ZP_09921158.1| large subunit ribosomal protein L13 [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379328866|dbj|GAB56291.1| large subunit ribosomal protein L13 [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G LKE T ++ + ++P + I +AV MLP+ L RKL++F G EH
Sbjct: 80 YVGGLKETTFEKLLAKNPEQVIERAVKGMLPKGPLGRAMFRKLKVFVGPEH 130
>gi|379737602|ref|YP_005331108.1| 50S ribosomal protein L13 [Blastococcus saxobsidens DD2]
gi|378785409|emb|CCG05082.1| 50S ribosomal subunit protein L13 [Blastococcus saxobsidens DD2]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR+ GH LK + +Q+ P I +A+ MLP N
Sbjct: 53 FVVIVNAGKVALTGSKRDDKVAYRHSGHPGGLKTINVGDQLRTHPDRVIERAIKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L +KL+++ G EHP + + Y
Sbjct: 113 TLGRQMLKKLKVYAGPEHPHAAQQPQTY 140
>gi|119481003|ref|XP_001260530.1| mitochondrial 54S ribosomal protein YmL23 [Neosartorya fischeri
NRRL 181]
gi|119408684|gb|EAW18633.1| 50S ribosomal protein L13 [Neosartorya fischeri NRRL 181]
Length = 172
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G L+ T+ + E+ E +R+AV MLP+N+LRD R +L+ F G HP+ + ++
Sbjct: 85 GSLRSMTMDQMFEKWGGGEVLRRAVRGMLPKNRLRDKRLARLKTFEGLAHPYKENIVK-- 142
Query: 90 VMPPRRVRELRPRVRRAMIREQKKAEMQQS 119
+ V P V++A + + +AE +QS
Sbjct: 143 -FGNKSVIGNLPEVQQAFKKPEAEAEAKQS 171
>gi|374993010|ref|YP_004968509.1| 50S ribosomal protein L13 [Desulfosporosinus orientis DSM 765]
gi|357211376|gb|AET65994.1| ribosomal protein L13, bacterial type [Desulfosporosinus orientis
DSM 765]
Length = 143
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 19 LNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIF 74
LND+M YR + G LKE T K+ M+ P A+ AV MLP NKL KL+++
Sbjct: 69 LNDKM---YRRHSGFPGGLKEVTYKKLMQTMPERAMEHAVKGMLPHNKLGAQMYTKLKVY 125
Query: 75 PGSEHP 80
G+ HP
Sbjct: 126 KGNTHP 131
>gi|329945766|ref|ZP_08293453.1| ribosomal protein L13 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528214|gb|EGF55192.1| ribosomal protein L13 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 147
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + +YR+ GH L + +E + P A+ KA+ M+P
Sbjct: 53 YVVVINADKVALTNGKADKKFAYRHSGHPGGLTAVSYRELLATRPERAVEKAIKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G+EHP + +P+
Sbjct: 113 KLGRAQLKKLKVYAGAEHPHASQNPKPF 140
>gi|313895525|ref|ZP_07829081.1| ribosomal protein L13 [Selenomonas sp. oral taxon 137 str. F0430]
gi|402302946|ref|ZP_10822046.1| ribosomal protein L13 [Selenomonas sp. FOBRC9]
gi|312975651|gb|EFR41110.1| ribosomal protein L13 [Selenomonas sp. oral taxon 137 str. F0430]
gi|400379410|gb|EJP32250.1| ribosomal protein L13 [Selenomonas sp. FOBRC9]
Length = 146
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + ++R PT I AV MLP+N L RKL ++ G+EHP + EP
Sbjct: 81 YQGGTTFTTAGQMLQRFPTRVIEHAVKGMLPKNSLGAQMFRKLNVYVGAEHPHAAQKPEP 140
>gi|153855380|ref|ZP_01996529.1| hypothetical protein DORLON_02543 [Dorea longicatena DSM 13814]
gi|149752200|gb|EDM62131.1| ribosomal protein L13 [Dorea longicatena DSM 13814]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL E M + P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLAEMMAKKPEKVIELAVKGMLPKGPLGRSMIKKLHVYAGPEH 130
>gi|115518810|gb|ABJ06794.1| LSU ribosomal protein L13P [Rhodopseudomonas palustris BisA53]
Length = 163
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
YIG +KER+ K +E R P + KAV RM+PR L + LR++ G EHP + E
Sbjct: 89 YIGGIKERSAKSILEGRFPERVVEKAVERMVPRGPLGRQQMSNLRVYGGPEHPHEAQQPE 148
Query: 88 P 88
P
Sbjct: 149 P 149
>gi|443242969|ref|YP_007376194.1| 50S ribosomal protein L13 [Nonlabens dokdonensis DSW-6]
gi|442800368|gb|AGC76173.1| 50S ribosomal protein L13 [Nonlabens dokdonensis DSW-6]
Length = 151
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T E +DPT + +AV MLP+NKL R L+++ GSEH
Sbjct: 85 YPGGQRSLTANELFAKDPTRVVERAVKGMLPKNKLGSAIYRNLKVYSGSEH 135
>gi|387769554|ref|ZP_10125817.1| ribosomal protein L13 [Pasteurella bettyae CCUG 2042]
gi|386906863|gb|EIJ71588.1| ribosomal protein L13 [Pasteurella bettyae CCUG 2042]
Length = 142
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T +E +ER P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFREMIERRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GS+H
Sbjct: 113 PLGRAMFRKLKVYAGSQH 130
>gi|406880256|gb|EKD28659.1| hypothetical protein ACD_79C00251G0005 [uncultured bacterium]
Length = 141
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
+IG LK+ + + ME P + A+ MLP+NKL+D +L+I+ G +HP + LE
Sbjct: 80 FIGGLKKISYERMMETHPDRILEHAIKGMLPKNKLQDRMMARLKIYKGDKHPHSAQKLE 138
>gi|139438210|ref|ZP_01771763.1| Hypothetical protein COLAER_00752 [Collinsella aerofaciens ATCC
25986]
gi|133776407|gb|EBA40227.1| ribosomal protein L13 [Collinsella aerofaciens ATCC 25986]
Length = 111
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + ++ ME+ P + I +AV MLP+ L + KL+++ G+EHP
Sbjct: 47 YNGGLKAESFRQAMEKHPEKVIERAVRGMLPKTTLGRAQMTKLKVYAGAEHP 98
>gi|77166287|ref|YP_344812.1| 50S ribosomal protein L13 [Nitrosococcus oceani ATCC 19707]
gi|254435458|ref|ZP_05048965.1| ribosomal protein L13 [Nitrosococcus oceani AFC27]
gi|118573424|sp|Q3J7B4.1|RL13_NITOC RecName: Full=50S ribosomal protein L13
gi|76884601|gb|ABA59282.1| LSU ribosomal protein L13P [Nitrosococcus oceani ATCC 19707]
gi|207088569|gb|EDZ65841.1| ribosomal protein L13 [Nitrosococcus oceani AFC27]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K TL++ +ER P AI AV MLP+N L RKL ++ GS HP
Sbjct: 80 YPGGIKSLTLEKLLERAPERAIELAVKGMLPKNPLGRAMFRKLNVYGGSNHP 131
>gi|74420483|gb|ABA04682.1| LSU ribosomal protein L13P [Nitrobacter winogradskyi Nb-255]
Length = 157
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K+RT K +E R P + KAV RM+PR L + LR++ G+EHP
Sbjct: 83 YIGGIKQRTAKSILEGRFPERVLEKAVERMIPRGPLGRVQLGNLRVYAGAEHP 135
>gi|226329311|ref|ZP_03804829.1| hypothetical protein PROPEN_03216 [Proteus penneri ATCC 35198]
gi|225202497|gb|EEG84851.1| ribosomal protein L13 [Proteus penneri ATCC 35198]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + V YR+ GH +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGHKRTDKVYYRHTGHVGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GSEH
Sbjct: 113 PLGRAMYRKLKVYAGSEH 130
>gi|162139846|ref|YP_318034.2| 50S ribosomal protein L13 [Nitrobacter winogradskyi Nb-255]
Length = 154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K+RT K +E R P + KAV RM+PR L + LR++ G+EHP
Sbjct: 80 YIGGIKQRTAKSILEGRFPERVLEKAVERMIPRGPLGRVQLGNLRVYAGAEHP 132
>gi|28198658|ref|NP_778972.1| 50S ribosomal protein L13 [Xylella fastidiosa Temecula1]
gi|71274700|ref|ZP_00650988.1| Ribosomal protein L13, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|170730059|ref|YP_001775492.1| 50S ribosomal protein L13 [Xylella fastidiosa M12]
gi|182681342|ref|YP_001829502.1| 50S ribosomal protein L13 [Xylella fastidiosa M23]
gi|386084845|ref|YP_006001127.1| 50S ribosomal protein L13 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417557622|ref|ZP_12208645.1| Ribosomal protein L13 RplM [Xylella fastidiosa EB92.1]
gi|81725020|sp|Q87DD3.1|RL13_XYLFT RecName: Full=50S ribosomal protein L13
gi|226705056|sp|B2IAE8.1|RL13_XYLF2 RecName: Full=50S ribosomal protein L13
gi|226705057|sp|B0U6Z6.1|RL13_XYLFM RecName: Full=50S ribosomal protein L13
gi|28056749|gb|AAO28621.1| 50S ribosomal protein L13 [Xylella fastidiosa Temecula1]
gi|71164432|gb|EAO14146.1| Ribosomal protein L13, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|71729551|gb|EAO31658.1| Ribosomal protein L13, bacterial and organelle form [Xylella
fastidiosa Ann-1]
gi|167964852|gb|ACA11862.1| 50S ribosomal protein L13 [Xylella fastidiosa M12]
gi|182631452|gb|ACB92228.1| ribosomal protein L13 [Xylella fastidiosa M23]
gi|307579792|gb|ADN63761.1| 50S ribosomal protein L13 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338179774|gb|EGO82697.1| Ribosomal protein L13 RplM [Xylella fastidiosa EB92.1]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK +L + ++R P + AV MLP+ L RKL+++ GS+HP
Sbjct: 80 YVGNLKSESLGQALQRHPERVLEIAVKGMLPKGPLGRAMYRKLKVYTGSKHP 131
>gi|453083484|gb|EMF11530.1| ribosomal protein L13 [Mycosphaerella populorum SO2202]
Length = 181
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK T+ + M + E +R+AV MLP+N+LRD R ++L+ F G EHP+
Sbjct: 85 GSLKVMTMDKMMAKWGGGEILRRAVRGMLPKNRLRDVRMQRLKCFEGQEHPY 136
>gi|297171165|gb|ADI22175.1| hypothetical protein [uncultured gamma proteobacterium
HF0200_24F15]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G +KE TL+E++ P I AV M+PRN+L KLR++ GSEHP
Sbjct: 80 YPGGIKEVTLEEELRLYPDRVIVNAVKGMIPRNRLGRAVLTKLRVYAGSEHPH 132
>gi|365896597|ref|ZP_09434663.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. STM 3843]
gi|365422662|emb|CCE07205.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. STM 3843]
Length = 154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 22 EMSVSYR---YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
E V Y+ Y+GH+KERT ++ +E R P + KA+ RM+PR L + LR++ G
Sbjct: 70 EQKVYYKHTGYVGHVKERTARQILEGRFPERVLEKAIERMIPRGPLGRVQMGNLRVYGGP 129
Query: 78 EHP 80
+HP
Sbjct: 130 DHP 132
>gi|261856629|ref|YP_003263912.1| 50S ribosomal protein L13 [Halothiobacillus neapolitanus c2]
gi|261837098|gb|ACX96865.1| ribosomal protein L13 [Halothiobacillus neapolitanus c2]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
+IG++K T ++ ++R P I AV MLP+N L D RKL+++ G EH
Sbjct: 80 FIGNMKHFTFEKMIDRAPERVIEMAVKGMLPKNPLGRDMFRKLKVYAGGEH 130
>gi|52307390|gb|AAU37890.1| RplM protein [Mannheimia succiniciproducens MBEL55E]
Length = 147
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 58 YIIVINADKVAVTGRKETDKVYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 117
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GS+H
Sbjct: 118 PLGRAMFRKLKVYAGSQH 135
>gi|419759949|ref|ZP_14286234.1| 50S ribosomal protein L13 [Thermosipho africanus H17ap60334]
gi|407514988|gb|EKF49774.1| 50S ribosomal protein L13 [Thermosipho africanus H17ap60334]
Length = 106
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G +KE T ++ +R+P + I+ AV RMLP+ L ++L+I+ GSEHP +P+E
Sbjct: 44 YPGGIKEFTARQLQQRNPEKLIQLAVKRMLPKTILGRKALKRLKIYAGSEHPHSAQKPIE 103
>gi|297625835|ref|YP_003687598.1| 50S ribosomal protein L13 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921600|emb|CBL56154.1| 50S ribosomal protein L13 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 147
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + I E S+ +R+ G L ++ E ++ DP +A+ AV M+P+N
Sbjct: 53 FVVIVNASKIAISGNKREGSLRHRHSGRPGGLHTTSIGELLDSDPRKAVELAVWGMMPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + KL+++ G ++P + EPY
Sbjct: 113 KLSRQQMSKLKVYAGPDNPHKAQNPEPY 140
>gi|161407224|ref|YP_638299.2| 50S ribosomal protein L13 [Mycobacterium sp. MCS]
gi|161407958|ref|YP_001069451.2| 50S ribosomal protein L13 [Mycobacterium sp. JLS]
gi|161485586|ref|YP_937150.2| 50S ribosomal protein L13 [Mycobacterium sp. KMS]
Length = 147
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 15 FILSLNDE-MSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N E ++VS YR Y G L+ RT+ E + + PT + A++ MLP
Sbjct: 53 FVIVINAEKIAVSGDKLNNKYAYRHSGYPGGLRRRTIGELLIKHPTRVVENAIVGMLPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G HP
Sbjct: 113 KLSRQVQKKLKVYAGPNHP 131
>gi|406908460|gb|EKD48958.1| hypothetical protein ACD_64C00055G0001 [uncultured bacterium]
Length = 143
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 7 VFFILRNLFILSLN---DEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
V I + +L+ N D+ VS+ + K T KE E+ PT+ I AV MLP+NK
Sbjct: 57 VVVINASKIVLTGNKWEDKEYVSFSGWSSGKKVATAKEMKEKHPTDIIELAVRGMLPKNK 116
Query: 63 LRDDRDRKLRIFPGSEHP 80
L + +KL+++ G+EHP
Sbjct: 117 LNREILKKLKVYVGAEHP 134
>gi|389770252|ref|ZP_10192016.1| 50S ribosomal protein L13 [Rhodanobacter sp. 115]
gi|388429793|gb|EIL87045.1| 50S ribosomal protein L13 [Rhodanobacter sp. 115]
Length = 142
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L+D+M + Y+G+LK +L++ + P I AV MLP+N L RKL+++ G+
Sbjct: 69 LDDKMYHRFTGYVGNLKTMSLRDLLATHPERVIEIAVKGMLPKNPLGRAMYRKLKVYGGA 128
Query: 78 EHP 80
EHP
Sbjct: 129 EHP 131
>gi|320528906|ref|ZP_08029998.1| ribosomal protein L13 [Selenomonas artemidis F0399]
gi|320138536|gb|EFW30426.1| ribosomal protein L13 [Selenomonas artemidis F0399]
Length = 141
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + ++R PT I AV MLP+N L RKL ++ G+EHP + EP
Sbjct: 76 YQGGTTFTTAGQMLQRFPTRVIEHAVKGMLPKNSLGAQMFRKLNVYVGAEHPHAAQKPEP 135
>gi|145225526|ref|YP_001136204.1| 50S ribosomal protein L13 [Mycobacterium gilvum PYR-GCK]
gi|315445879|ref|YP_004078758.1| 50S ribosomal protein L13 [Mycobacterium gilvum Spyr1]
gi|189041010|sp|A4TEL3.1|RL13_MYCGI RecName: Full=50S ribosomal protein L13
gi|145218012|gb|ABP47416.1| LSU ribosomal protein L13P [Mycobacterium gilvum PYR-GCK]
gi|315264182|gb|ADU00924.1| LSU ribosomal protein L13P [Mycobacterium gilvum Spyr1]
Length = 147
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSL-NDEMSVSYRYI-----GHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N +SL D+++ + Y G L++R + + + + PT + A+ MLP
Sbjct: 53 FVIIINADKISLSGDKLTKKFAYSHSGYPGGLRKRAIGDLLAKHPTRVVENAITGMLPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G EHP
Sbjct: 113 KLGRQIQKKLKVYAGPEHP 131
>gi|407642161|ref|YP_006805920.1| 50S ribosomal protein L13 [Nocardia brasiliensis ATCC 700358]
gi|407305045|gb|AFT98945.1| 50S ribosomal protein L13 [Nocardia brasiliensis ATCC 700358]
Length = 147
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 15 FILSLN-DEMSVS---------YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S + + GH LK RT+ + +E P + KAV M+P+N
Sbjct: 53 FVIIINADKVAISGNKKADKLIHHHSGHPGGLKSRTVGQVLESRPDRLVEKAVKGMIPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + KL+++ G HP
Sbjct: 113 KLGNAIAGKLKVYAGPSHP 131
>gi|256371246|ref|YP_003109070.1| 50S ribosomal protein L13 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007830|gb|ACU53397.1| ribosomal protein L13 [Acidimicrobium ferrooxidans DSM 10331]
Length = 154
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G ++ TL E++ R P + AV MLP+N+L RKL+++ G EHP
Sbjct: 80 YPGGIRSETLAERLARHPERVVEAAVRGMLPKNRLGRAMYRKLKVYAGPEHPH 132
>gi|116191663|ref|XP_001221644.1| mitochondrial 54S ribosomal protein YmL23 [Chaetomium globosum CBS
148.51]
gi|88181462|gb|EAQ88930.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 183
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ M++ +E +RKAV MLP+
Sbjct: 71 YVVVTNCAALYTTGQKKYRKTYYRHNTRPGSLRTVTMDVLMDKFGGSEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 131 NRLRDKRLARLKAFEGDAHPY 151
>gi|373114790|ref|ZP_09528999.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|371650970|gb|EHO16406.1| ribosomal protein L13 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
Length = 85
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
+ G ++ER L E +++ P E + AV RMLP+NKL ++ +LR+F G+EH
Sbjct: 23 FPGGIRERKLGEILDKRPEELLMLAVKRMLPKNKLGREQLTRLRVFAGAEH 73
>gi|296412530|ref|XP_002835977.1| mitochondrial 54S ribosomal protein YmL23 [Tuber melanosporum
Mel28]
gi|295629774|emb|CAZ80134.1| unnamed protein product [Tuber melanosporum]
Length = 179
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GHL+E T+ M++ E +R+AV MLP+N+LR+ R +LR F G HP+
Sbjct: 85 GHLQEITMDRMMKKFGGAEVLRRAVSGMLPKNRLREVRLGRLRAFEGFGHPY 136
>gi|156086180|ref|XP_001610499.1| 50S ribosomal protein L13 [Babesia bovis T2Bo]
gi|154797752|gb|EDO06931.1| 50S ribosomal protein L13 ,putative [Babesia bovis]
Length = 240
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 37 TLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
T K M R+P I AV RMLPRNKLR R+L ++ G+ HP + P
Sbjct: 139 TAKTMMARNPAMIINLAVKRMLPRNKLRPFWYRRLFVYGGALHPHWNIP 187
>gi|33152550|ref|NP_873903.1| 50S ribosomal protein L13 [Haemophilus ducreyi 35000HP]
gi|81713014|sp|Q7VLF6.1|RL13_HAEDU RecName: Full=50S ribosomal protein L13
gi|33148774|gb|AAP96292.1| 50S ribosomal protein L13 [Haemophilus ducreyi 35000HP]
Length = 140
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L D RKL+++ G+ H
Sbjct: 78 YVGGIKDATFKEMISRRPEAVIEIAVKGMLPKGPLGRDMFRKLKVYAGNTH 128
>gi|183597943|ref|ZP_02959436.1| hypothetical protein PROSTU_01292 [Providencia stuartii ATCC 25827]
gi|386744174|ref|YP_006217353.1| 50S ribosomal protein L13 [Providencia stuartii MRSN 2154]
gi|188022715|gb|EDU60755.1| ribosomal protein L13 [Providencia stuartii ATCC 25827]
gi|384480867|gb|AFH94662.1| 50S ribosomal protein L13 [Providencia stuartii MRSN 2154]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKIAVTGNKREDKIYYRHTGHVGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|409358833|ref|ZP_11237192.1| 50S ribosomal protein L13 [Dietzia alimentaria 72]
Length = 147
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR+ G LK ++L + M+ P + KAV MLP N
Sbjct: 53 FVVIINADKVAISSNKRERVQHYRHSGFPGGLKSQSLGKAMDTRPDRVVEKAVKGMLPSN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL KL+++ G +HP + PY
Sbjct: 113 KLGRAVASKLKVYAGPDHPHAAQQPVPY 140
>gi|294010589|ref|YP_003544049.1| 50S ribosomal protein L13 [Sphingobium japonicum UT26S]
gi|390168181|ref|ZP_10220147.1| 50S ribosomal protein L13 [Sphingobium indicum B90A]
gi|292673919|dbj|BAI95437.1| ribosomal protein L13 [Sphingobium japonicum UT26S]
gi|389589247|gb|EIM67276.1| 50S ribosomal protein L13 [Sphingobium indicum B90A]
Length = 159
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE T ++ +E R P + KAV RM+PR L + R LRIF G+EHP
Sbjct: 85 YAGGIKETTPQKVLEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFAGAEHP 137
>gi|302410489|ref|XP_003003078.1| mitochondrial 54S ribosomal protein YmL23 [Verticillium
albo-atrum VaMs.102]
gi|261358102|gb|EEY20530.1| 54S ribosomal protein L23 [Verticillium albo-atrum VaMs.102]
Length = 129
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L + YR+ G L+ T+ M + E +RKAV MLP+
Sbjct: 17 YVVVTNCAALHVTGRKMWQKTYYRHTTRPGSLRSVTMDVLMAKHGGAEVLRKAVSGMLPK 76
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 77 NRLRDKRLARLKAFEGDAHPY 97
>gi|443673883|ref|ZP_21138929.1| 50S ribosomal protein L13 [Rhodococcus sp. AW25M09]
gi|443413483|emb|CCQ17267.1| 50S ribosomal protein L13 [Rhodococcus sp. AW25M09]
Length = 147
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 33 LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
LK R+ ++ +E +P + KAV+ M+P+NKL + KL+++ G HP + P+
Sbjct: 84 LKSRSTRQVLENNPDRLVEKAVVGMIPKNKLGNAIAGKLKVYAGPNHPHAAQQPVPF 140
>gi|68250025|ref|YP_249137.1| 50S ribosomal protein L13 [Haemophilus influenzae 86-028NP]
gi|145630751|ref|ZP_01786529.1| 50S ribosomal protein L13 [Haemophilus influenzae R3021]
gi|145632787|ref|ZP_01788520.1| 50S ribosomal protein L13 [Haemophilus influenzae 3655]
gi|145634979|ref|ZP_01790686.1| 50S ribosomal protein L13 [Haemophilus influenzae PittAA]
gi|145638940|ref|ZP_01794548.1| 50S ribosomal protein L13 [Haemophilus influenzae PittII]
gi|148825986|ref|YP_001290739.1| 50S ribosomal protein L13 [Haemophilus influenzae PittEE]
gi|229844079|ref|ZP_04464220.1| 50S ribosomal protein L13 [Haemophilus influenzae 6P18H1]
gi|229846699|ref|ZP_04466806.1| 50S ribosomal protein L13 [Haemophilus influenzae 7P49H1]
gi|260583065|ref|ZP_05850847.1| ribosomal protein L13 [Haemophilus influenzae NT127]
gi|325578433|ref|ZP_08148568.1| 50S ribosomal protein L13 [Haemophilus parainfluenzae ATCC 33392]
gi|342904307|ref|ZP_08726108.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21621]
gi|343517658|ref|ZP_08754655.1| ribosomal protein L13 [Haemophilus pittmaniae HK 85]
gi|345430265|ref|YP_004823385.1| 50S ribosomal protein L13 [Haemophilus parainfluenzae T3T1]
gi|373467323|ref|ZP_09558622.1| ribosomal protein L13 [Haemophilus sp. oral taxon 851 str. F0397]
gi|378697717|ref|YP_005179675.1| 50S ribosomal protein L13 [Haemophilus influenzae 10810]
gi|386265890|ref|YP_005829382.1| 50S ribosomal protein L13 [Haemophilus influenzae R2846]
gi|417840209|ref|ZP_12486357.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19107]
gi|417842703|ref|ZP_12488784.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21127]
gi|417845644|ref|ZP_12491670.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21639]
gi|419801594|ref|ZP_14326818.1| ribosomal protein L13 [Haemophilus parainfluenzae HK262]
gi|419839060|ref|ZP_14362478.1| ribosomal protein L13 [Haemophilus haemolyticus HK386]
gi|419844884|ref|ZP_14368171.1| ribosomal protein L13 [Haemophilus parainfluenzae HK2019]
gi|81335551|sp|Q4QKH0.1|RL13_HAEI8 RecName: Full=50S ribosomal protein L13
gi|166230988|sp|A5UC55.1|RL13_HAEIE RecName: Full=50S ribosomal protein L13
gi|68058224|gb|AAX88477.1| 50S ribosomal protein L13 [Haemophilus influenzae 86-028NP]
gi|144983633|gb|EDJ91093.1| 50S ribosomal protein L13 [Haemophilus influenzae R3021]
gi|144986443|gb|EDJ93009.1| 50S ribosomal protein L13 [Haemophilus influenzae 3655]
gi|145267845|gb|EDK07842.1| 50S ribosomal protein L13 [Haemophilus influenzae PittAA]
gi|145271912|gb|EDK11821.1| 50S ribosomal protein L13 [Haemophilus influenzae PittII]
gi|148716146|gb|ABQ98356.1| 50S ribosomal protein L13 [Haemophilus influenzae PittEE]
gi|229810188|gb|EEP45907.1| 50S ribosomal protein L13 [Haemophilus influenzae 7P49H1]
gi|229813073|gb|EEP48761.1| 50S ribosomal protein L13 [Haemophilus influenzae 6P18H1]
gi|260093916|gb|EEW77822.1| ribosomal protein L13 [Haemophilus influenzae NT127]
gi|301156328|emb|CBW15799.1| 50S ribosomal subunit protein L13 [Haemophilus parainfluenzae T3T1]
gi|301170233|emb|CBW29837.1| 50S ribosomal subunit protein L13 [Haemophilus influenzae 10810]
gi|309750909|gb|ADO80893.1| 50S ribosomal protein L13 [Haemophilus influenzae R2866]
gi|309973126|gb|ADO96327.1| 50S ribosomal protein L13 [Haemophilus influenzae R2846]
gi|325160169|gb|EGC72298.1| 50S ribosomal protein L13 [Haemophilus parainfluenzae ATCC 33392]
gi|341949688|gb|EGT76290.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19107]
gi|341951262|gb|EGT77839.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21127]
gi|341953547|gb|EGT80051.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21621]
gi|341954713|gb|EGT81186.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M21639]
gi|343395094|gb|EGV07639.1| ribosomal protein L13 [Haemophilus pittmaniae HK 85]
gi|371758858|gb|EHO47614.1| ribosomal protein L13 [Haemophilus sp. oral taxon 851 str. F0397]
gi|385193510|gb|EIF40872.1| ribosomal protein L13 [Haemophilus parainfluenzae HK262]
gi|386416810|gb|EIJ31302.1| ribosomal protein L13 [Haemophilus parainfluenzae HK2019]
gi|386909771|gb|EIJ74435.1| ribosomal protein L13 [Haemophilus haemolyticus HK386]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMFRKLKVYAGAEH 130
>gi|49475552|ref|YP_033593.1| 50S ribosomal protein L13 [Bartonella henselae str. Houston-1]
gi|81696165|sp|Q6G3I6.1|RL13_BARHE RecName: Full=50S ribosomal protein L13
gi|49238358|emb|CAF27582.1| 50S ribosomal protein l13 [Bartonella henselae str. Houston-1]
Length = 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +K+RT ++ +E R P + KAV RM+PR L + + LR++ GS+HP
Sbjct: 80 YIGGIKKRTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
>gi|328943360|ref|ZP_08240825.1| 50S ribosomal protein L13 [Atopobium vaginae DSM 15829]
gi|327491329|gb|EGF23103.1| 50S ribosomal protein L13 [Atopobium vaginae DSM 15829]
Length = 146
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++G +K + E ME+ P I AV MLP+ L + KL+++ G+EHP
Sbjct: 82 FLGGIKFESFAEAMEKHPERVIEHAVKGMLPKGTLGRKQATKLKVYAGAEHP 133
>gi|210075699|ref|XP_502643.2| mitochondrial 54S ribosomal protein YmL23 [Yarrowia lipolytica]
gi|199425788|emb|CAG80831.2| YALI0D10065p [Yarrowia lipolytica CLIB122]
Length = 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
GH +K +E + +E +R+ V MLPRNKL+ R +L++F G+EHP+
Sbjct: 85 GHSHHVAVKRVIENQGVSEVLRRTVAGMLPRNKLKRGRIARLKVFEGTEHPY 136
>gi|335044562|ref|ZP_08537587.1| ribosomal protein L13 [Methylophaga aminisulfidivorans MP]
gi|333787808|gb|EGL53692.1| ribosomal protein L13 [Methylophaga aminisulfidivorans MP]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V L + + + Y + GH+ K +L++Q+++ P I+ AV MLP+N
Sbjct: 53 YIVVINAEKLRVTGNKMKDKIYYHHTGHIGGIKSISLEKQLDKAPERVIQTAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L KL+++ G+EHP
Sbjct: 113 PLGRAMFGKLKVYAGAEHP 131
>gi|161510979|ref|YP_088475.2| 50S ribosomal protein L13 [Mannheimia succiniciproducens MBEL55E]
gi|118573413|sp|Q65T20.2|RL13_MANSM RecName: Full=50S ribosomal protein L13
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKVYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GS+H
Sbjct: 113 PLGRAMFRKLKVYAGSQH 130
>gi|326792572|ref|YP_004310393.1| 50S ribosomal protein L13 [Clostridium lentocellum DSM 5427]
gi|326543336|gb|ADZ85195.1| ribosomal protein L13 [Clostridium lentocellum DSM 5427]
Length = 143
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G LKE T +E M+ P I AV MLP+N L LR++ G+EH +P+E
Sbjct: 81 YAGGLKETTAREMMDTHPERVIMNAVKGMLPKNSLGRKMLTNLRVYAGTEHNHEAQKPVE 140
>gi|389871287|ref|YP_006378706.1| 50S ribosomal protein L13 [Advenella kashmirensis WT001]
gi|388536536|gb|AFK61724.1| 50S ribosomal protein L13 [Advenella kashmirensis WT001]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V ++ + E +R Y G + E ++ ER P AI KAV MLP+
Sbjct: 53 YIVIINAADIVVTGAKSEDKKYFRHSGYPGGIYETNFRKMQERFPGRAIEKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 PLGYAMIKKLKVYAGAEHP 131
>gi|171687124|ref|XP_001908503.1| hypothetical protein [Podospora anserina S mat+]
gi|170943523|emb|CAP69176.1| unnamed protein product [Podospora anserina S mat+]
Length = 185
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L+ YR+ G L+ T+ M++ E +RKAV MLP+
Sbjct: 71 YVVVTNCAALYTTGHKKWRKTYYRHNTRPGSLRTITMDVLMDKFGGAEVLRKAVSGMLPK 130
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G+ HP+
Sbjct: 131 NRLRDKRLARLKAFEGNAHPY 151
>gi|291548426|emb|CBL21534.1| LSU ribosomal protein L13P [Ruminococcus sp. SR1/5]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE + + P + I AV MLP+ L ++KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMLVKKPEKVIELAVKGMLPKGPLGRAMNKKLFVYAGPEH 130
>gi|406919196|gb|EKD57555.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 143
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 15 FILS---LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRK 70
FI++ L D+M S+ + G KE L++ +++D I KAV MLP++K + +R R+
Sbjct: 62 FIVTGKKLTDKMYYSHSGFAGGFKEANLQQMIDKDSRRVIEKAVKGMLPKDKHQQNRLRR 121
Query: 71 LRIFPGSEHPF 81
L+IF +H +
Sbjct: 122 LKIFKSDKHQY 132
>gi|302869904|ref|YP_003838541.1| 50S ribosomal protein L13 [Micromonospora aurantiaca ATCC 27029]
gi|315501366|ref|YP_004080253.1| 50S ribosomal protein L13 [Micromonospora sp. L5]
gi|302572763|gb|ADL48965.1| ribosomal protein L13 [Micromonospora aurantiaca ATCC 27029]
gi|315407985|gb|ADU06102.1| ribosomal protein L13 [Micromonospora sp. L5]
Length = 147
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + V+YR Y G LK E + + P AI AV MLP N
Sbjct: 53 FVVIVNAGKVALTGNKRQTKVAYRHSGYPGGLKRVGYDELLTKRPERAIELAVKGMLPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL +KL+++ G+EHP
Sbjct: 113 KLGRQLLKKLKVYAGAEHP 131
>gi|392402963|ref|YP_006439575.1| LSU ribosomal protein L13P [Turneriella parva DSM 21527]
gi|390610917|gb|AFM12069.1| LSU ribosomal protein L13P [Turneriella parva DSM 21527]
Length = 146
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 17 LSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
+S N E Y RY G +K R+ K+QME P +A+ V MLP+ K ++R
Sbjct: 70 VSGNKEAEKEYIWHSRYYGGMKTRSYKKQMEIAPDQAVLLTVKGMLPKTKYGRKLLTRVR 129
Query: 73 IFPGSEHPF-GDRPL 86
+F G+EH G +P+
Sbjct: 130 VFAGAEHNLQGQQPV 144
>gi|383829074|ref|ZP_09984163.1| ribosomal protein L13, bacterial type [Saccharomonospora
xinjiangensis XJ-54]
gi|383461727|gb|EID53817.1| ribosomal protein L13, bacterial type [Saccharomonospora
xinjiangensis XJ-54]
Length = 150
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L++R+ E ++ P + K V MLP+
Sbjct: 53 FVIIVNADKVALTGKKREQKFAYRHSGYPGGLRKRSFGELLDTRPERLVEKVVKGMLPKT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL + +KL+++ G EHP + +P+
Sbjct: 113 KLGRAQAKKLKVYAGPEHPHTAQKPQPH 140
>gi|300112968|ref|YP_003759543.1| 50S ribosomal protein L13 [Nitrosococcus watsonii C-113]
gi|299538905|gb|ADJ27222.1| ribosomal protein L13 [Nitrosococcus watsonii C-113]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G +K TL++ +ER P AI AV MLP+N L RKL ++ G+ HP + +P
Sbjct: 80 YPGGIKSLTLEKLLERAPERAIELAVKGMLPKNTLGRAMFRKLNVYGGTSHPHTAQQPQP 139
>gi|210611509|ref|ZP_03288929.1| hypothetical protein CLONEX_01119 [Clostridium nexile DSM 1787]
gi|210151956|gb|EEA82963.1| hypothetical protein CLONEX_01119 [Clostridium nexile DSM 1787]
Length = 142
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + Y Y+G +KE TL+E M + P + I AV MLP+
Sbjct: 53 YVVVINAEKIKVTGKKLDQKIYYHHSDYVGGMKETTLREMMAKKPEKVIELAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L +KL ++ G EH
Sbjct: 113 PLGRSMIKKLHVYAGPEH 130
>gi|422015725|ref|ZP_16362320.1| 50S ribosomal protein L13 [Providencia burhodogranariea DSM 19968]
gi|414097994|gb|EKT59645.1| 50S ribosomal protein L13 [Providencia burhodogranariea DSM 19968]
Length = 142
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKREDKIYYRHTGHVGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|387126638|ref|YP_006295243.1| 50S ribosomal protein L13 [Methylophaga sp. JAM1]
gi|386273700|gb|AFI83598.1| LSU ribosomal protein L13p (L13Ae) [Methylophaga sp. JAM1]
Length = 142
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +K +L++Q+++ P I+ AV MLP+N L KL+++ G+EHP
Sbjct: 80 HIGGIKSISLEKQLDKAPERVIQTAVKGMLPKNPLGRAMFSKLKVYAGTEHP 131
>gi|395226711|ref|ZP_10405159.1| ribosomal protein L13, bacterial type [Thiovulum sp. ES]
gi|394445037|gb|EJF06033.1| ribosomal protein L13, bacterial type [Thiovulum sp. ES]
Length = 143
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K TL E ++++P + + A MLP+ KL D +KL+++ G EHP
Sbjct: 83 YFGSTKSETLAELLDKNPEKLYKLATRGMLPKTKLGKDMLKKLKVYEGDEHP 134
>gi|210630853|ref|ZP_03296627.1| hypothetical protein COLSTE_00512 [Collinsella stercoris DSM 13279]
gi|210160287|gb|EEA91258.1| ribosomal protein L13 [Collinsella stercoris DSM 13279]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + ++ ME+ P + + +AV MLP+ L + KL+++ G+EHP
Sbjct: 83 YNGGLKAESFRQAMEKHPEKVVERAVRGMLPKTTLGRKQLTKLKVYAGTEHP 134
>gi|406906768|gb|EKD47826.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 115
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK T KE +++ P +++AV M+PRNKLR KL+++ G +H
Sbjct: 53 YPGALKTTTAKEMLQKKPENLLKEAVKGMIPRNKLRTHVLSKLKVYAGPKH 103
>gi|441522143|ref|ZP_21003796.1| 50S ribosomal protein L13 [Gordonia sihwensis NBRC 108236]
gi|441458207|dbj|GAC61757.1| 50S ribosomal protein L13 [Gordonia sihwensis NBRC 108236]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH LK +++ E + P + AV MLP+NKL + KL+++ G HP
Sbjct: 75 YRHSGHPGGLKSQSIGELLATKPERVVESAVKGMLPKNKLGNAIAGKLKVYAGPNHP 131
>gi|260579194|ref|ZP_05847084.1| 50S ribosomal protein L13 [Corynebacterium jeikeium ATCC 43734]
gi|258602680|gb|EEW15967.1| 50S ribosomal protein L13 [Corynebacterium jeikeium ATCC 43734]
Length = 183
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +L +E P + +AV M+P NKL +KLR+F G EH F + E
Sbjct: 116 YPGGLKTMSLGRSLELHPERVVEEAVKGMMPHNKLSRASIKKLRVFAGPEHTFEAQKPET 175
Query: 89 Y 89
Y
Sbjct: 176 Y 176
>gi|358459807|ref|ZP_09170001.1| ribosomal protein L13 [Frankia sp. CN3]
gi|357076996|gb|EHI86461.1| ribosomal protein L13 [Frankia sp. CN3]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ E S YR Y G L+ + E ++ P + KA+ MLP+N
Sbjct: 53 FVIIINAGKVALSGSKREQSQYYRHSGYPGGLRSTSYGELLDTRPQLLVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L + RKL+++ G HP + +P+
Sbjct: 113 RLGHAQARKLKVYAGPTHPHQAQQPQPF 140
>gi|226227184|ref|YP_002761290.1| 50S ribosomal protein L13 [Gemmatimonas aurantiaca T-27]
gi|259645556|sp|C1A3Z5.1|RL13_GEMAT RecName: Full=50S ribosomal protein L13
gi|226090375|dbj|BAH38820.1| 50S ribosomal protein L13 [Gemmatimonas aurantiaca T-27]
Length = 149
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKL-RDDRDRKLRIFPGSEHP 80
Y+GH K + + P I KAV MLP+ L R RKLR+F G+EHP
Sbjct: 80 YMGHEKHTPFASVLAKHPERVIEKAVYGMLPKTALGRQVLRRKLRVFAGAEHP 132
>gi|319778571|ref|YP_004129484.1| 50S ribosomal protein L13 [Taylorella equigenitalis MCE9]
gi|397662343|ref|YP_006503043.1| 50S ribosomal protein L13 [Taylorella equigenitalis ATCC 35865]
gi|317108595|gb|ADU91341.1| LSU ribosomal protein L13p (L13Ae) [Taylorella equigenitalis MCE9]
gi|394350522|gb|AFN36436.1| 50S ribosomal protein L13 [Taylorella equigenitalis ATCC 35865]
gi|399114807|emb|CCG17603.1| 50S ribosomal protein L13 [Taylorella equigenitalis 14/56]
Length = 142
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V +++ + E +R+ G + E ++ ER P AI KAV MLP+
Sbjct: 53 YIVIINAQDIVVTGSKFEDKKYFRHTGFPGGIYETNFRKLQERHPGRAIEKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+I+ GSEHP
Sbjct: 113 PLGYAMIKKLKIYAGSEHP 131
>gi|375137814|ref|YP_004998463.1| 50S ribosomal protein L13 [Mycobacterium rhodesiae NBB3]
gi|359818435|gb|AEV71248.1| ribosomal protein L13, bacterial type [Mycobacterium rhodesiae
NBB3]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR+ G L+ R L ++M++ + KA+L M+P
Sbjct: 53 FVIVINADKVAISGDKLTKKFAYRHSGFPGGLRARALGDEMQKHADRVVEKAILGMIPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G +HP + PY
Sbjct: 113 KLGHQIQKKLKVYVGPDHPHAAQQPIPY 140
>gi|331699125|ref|YP_004335364.1| 50S ribosomal protein L13 [Pseudonocardia dioxanivorans CB1190]
gi|326953814|gb|AEA27511.1| ribosomal protein L13 [Pseudonocardia dioxanivorans CB1190]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L++R++ E +E+ P + KA+ MLP+N+L +KL+++ G HP
Sbjct: 80 YPGGLRQRSVGEMIEKHPDRLVEKAIKGMLPKNRLGRAMAKKLKVYAGPTHP 131
>gi|340520160|gb|EGR50397.1| hypothetical protein TRIREDRAFT_105479 [Trichoderma reesei QM6a]
Length = 179
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G L+ T+ ME+ +E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 96 GSLRTVTMDVLMEKHGGSEVLRKAVSGMLPKNRLRDKRLARLKAFEGEAHPY 147
>gi|376259838|ref|YP_005146558.1| 50S ribosomal protein L13 [Clostridium sp. BNL1100]
gi|373943832|gb|AEY64753.1| ribosomal protein L13, bacterial type [Clostridium sp. BNL1100]
Length = 144
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 27 YRYI----GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YRY G LKE K ME+ P +AI AV MLP+N L RKL+++ GSEH
Sbjct: 74 YRYHTLHPGGLKEIKYKHLMEKHPEKAIELAVKGMLPKNSLGRQMYRKLKVYRGSEH 130
>gi|326381863|ref|ZP_08203556.1| 50S ribosomal protein L13 [Gordonia neofelifaecis NRRL B-59395]
gi|326199289|gb|EGD56470.1| 50S ribosomal protein L13 [Gordonia neofelifaecis NRRL B-59395]
Length = 147
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH LK +++ E + P + AV MLP+NKL + KL+++ G HP
Sbjct: 75 YRHSGHPGGLKSQSIGELLATKPERVVESAVKGMLPKNKLGNAIAGKLKVYAGPNHP 131
>gi|346971077|gb|EGY14529.1| 54S ribosomal protein L23 [Verticillium dahliae VdLs.17]
Length = 179
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L + YR+ G L+ T+ M + E +RKAV MLP+
Sbjct: 67 YVVVTNCAALHVTGRKMWQKTYYRHTTRPGSLRSVTMDVLMAKHGGAEVLRKAVSGMLPK 126
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LRD R +L+ F G HP+
Sbjct: 127 NRLRDKRLARLKAFEGDAHPY 147
>gi|16273350|ref|NP_439595.1| 50S ribosomal protein L13 [Haemophilus influenzae Rd KW20]
gi|145629444|ref|ZP_01785242.1| 50S ribosomal protein L13 [Haemophilus influenzae 22.1-21]
gi|145636155|ref|ZP_01791825.1| 50S ribosomal protein L13 [Haemophilus influenzae PittHH]
gi|145641605|ref|ZP_01797182.1| 50S ribosomal protein L13 [Haemophilus influenzae R3021]
gi|148826946|ref|YP_001291699.1| 50S ribosomal protein L13 [Haemophilus influenzae PittGG]
gi|260580721|ref|ZP_05848547.1| ribosomal protein L13 [Haemophilus influenzae RdAW]
gi|319776294|ref|YP_004138782.1| 50S ribosomal protein L13 [Haemophilus influenzae F3047]
gi|329123439|ref|ZP_08252003.1| 50S ribosomal protein L13 [Haemophilus aegyptius ATCC 11116]
gi|1172955|sp|P44387.1|RL13_HAEIN RecName: Full=50S ribosomal protein L13
gi|166230989|sp|A5UEW0.1|RL13_HAEIG RecName: Full=50S ribosomal protein L13
gi|1574283|gb|AAC23093.1| ribosomal protein L13 (rpL13) [Haemophilus influenzae Rd KW20]
gi|144978287|gb|EDJ88051.1| 50S ribosomal protein L13 [Haemophilus influenzae 22.1-21]
gi|145270677|gb|EDK10610.1| 50S ribosomal protein L13 [Haemophilus influenzae PittHH]
gi|145273652|gb|EDK13521.1| 50S ribosomal protein L13 [Haemophilus influenzae 22.4-21]
gi|148718188|gb|ABQ99315.1| 50S ribosomal protein L13 [Haemophilus influenzae PittGG]
gi|260092538|gb|EEW76475.1| ribosomal protein L13 [Haemophilus influenzae RdAW]
gi|317450885|emb|CBY87110.1| 50S ribosomal subunit protein L13 [Haemophilus influenzae F3047]
gi|327471021|gb|EGF16476.1| 50S ribosomal protein L13 [Haemophilus aegyptius ATCC 11116]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G EH
Sbjct: 113 PLGRAMFRKLKVYAGGEH 130
>gi|452127302|ref|ZP_21939885.1| 50S ribosomal protein L13 [Bordetella holmesii F627]
gi|452130673|ref|ZP_21943245.1| 50S ribosomal protein L13 [Bordetella holmesii H558]
gi|451920598|gb|EMD70744.1| 50S ribosomal protein L13 [Bordetella holmesii H558]
gi|451922397|gb|EMD72542.1| 50S ribosomal protein L13 [Bordetella holmesii F627]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V ++ + + +R Y G ++E ++ ER P AI+KAV MLP+
Sbjct: 53 YIVIINASDIVVTGTKAQDKKYFRHTTYPGGIRETNFEKMQERFPGRAIQKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 PLGYAMIKKLKVYAGAEHP 131
>gi|422021741|ref|ZP_16368251.1| 50S ribosomal protein L13 [Providencia sneebia DSM 19967]
gi|414098338|gb|EKT59987.1| 50S ribosomal protein L13 [Providencia sneebia DSM 19967]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKREDKIYYRHTGHVGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|359298942|ref|ZP_09184781.1| 50S ribosomal protein L13 [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305692|ref|ZP_10824751.1| ribosomal protein L13 [Haemophilus sputorum HK 2154]
gi|400376805|gb|EJP29692.1| ribosomal protein L13 [Haemophilus sputorum HK 2154]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L + RKL+++ G+EH
Sbjct: 80 YVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGNEH 130
>gi|315634338|ref|ZP_07889625.1| 50S ribosomal protein L13 [Aggregatibacter segnis ATCC 33393]
gi|315476928|gb|EFU67673.1| 50S ribosomal protein L13 [Aggregatibacter segnis ATCC 33393]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + D + Y Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGNKDSDKIYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMFRKLKVYAGAEH 130
>gi|161986619|ref|YP_251540.2| 50S ribosomal protein L13 [Corynebacterium jeikeium K411]
Length = 147
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +L +E P + +AV M+P NKL +KLR+F G EH F + E
Sbjct: 80 YPGGLKTMSLGRSLELHPERVVEEAVKGMMPHNKLSRASIKKLRVFAGPEHTFEAQKPET 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|75859022|ref|XP_868851.1| hypothetical protein AN9469.2 [Aspergillus nidulans FGSC A4]
gi|40738397|gb|EAA57587.1| hypothetical protein AN9469.2 [Aspergillus nidulans FGSC A4]
gi|259479860|tpe|CBF70470.1| TPA: 50S ribosomal protein L13 (AFU_orthologue; AFUA_2G10510)
[Aspergillus nidulans FGSC A4]
Length = 166
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G L+ T+ + E+ E +R+AV MLP+N+LRD R +L+ F G +HP+ D +
Sbjct: 85 GSLRSMTMDKMFEKWGGGEVLRRAVRGMLPKNRLRDKRLARLKTFEGVDHPYKDNIVR-- 142
Query: 90 VMPPRRVRELRPRVRRAMIREQKKAE 115
+ P + L P V +A +E K ++
Sbjct: 143 IGAPSNIGAL-PEV-KAAFQEAKTSQ 166
>gi|308233552|ref|ZP_07664289.1| ribosomal protein L13 [Atopobium vaginae DSM 15829]
Length = 126
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++G +K + E ME+ P I AV MLP+ L + KL+++ G+EHP
Sbjct: 62 FLGGIKFESFAEAMEKHPERVIEHAVKGMLPKGTLGRKQATKLKVYAGAEHP 113
>gi|295109346|emb|CBL23299.1| LSU ribosomal protein L13P [Ruminococcus obeum A2-162]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE M + P + + AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMMAKKPEKVVELAVKGMLPKGPLGRTMYKKLFVYAGPEH 130
>gi|126208082|ref|YP_001053307.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165976015|ref|YP_001651608.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|190149915|ref|YP_001968440.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|240949690|ref|ZP_04754025.1| 50S ribosomal protein L13 [Actinobacillus minor NM305]
gi|257464712|ref|ZP_05629083.1| 50S ribosomal protein L13 [Actinobacillus minor 202]
gi|303251533|ref|ZP_07337707.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|303252230|ref|ZP_07338398.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307245461|ref|ZP_07527549.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307247574|ref|ZP_07529618.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307249803|ref|ZP_07531780.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307252154|ref|ZP_07534053.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307254415|ref|ZP_07536253.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307256625|ref|ZP_07538405.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307258874|ref|ZP_07540606.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307261060|ref|ZP_07542740.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307263239|ref|ZP_07544859.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322514386|ref|ZP_08067432.1| 50S ribosomal protein L13 [Actinobacillus ureae ATCC 25976]
gi|386389540|ref|ZP_10074354.1| ribosomal protein L13 [Haemophilus paraphrohaemolyticus HK411]
gi|387771431|ref|ZP_10127592.1| ribosomal protein L13 [Haemophilus parahaemolyticus HK385]
gi|407692398|ref|YP_006817187.1| 50S ribosomal protein L13 [Actinobacillus suis H91-0380]
gi|166230953|sp|A3MZW6.1|RL13_ACTP2 RecName: Full=50S ribosomal protein L13
gi|226702811|sp|B3H129.1|RL13_ACTP7 RecName: Full=50S ribosomal protein L13
gi|226702812|sp|B0BUF9.1|RL13_ACTPJ RecName: Full=50S ribosomal protein L13
gi|126096874|gb|ABN73702.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165876116|gb|ABY69164.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|189915046|gb|ACE61298.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|240295948|gb|EER46624.1| 50S ribosomal protein L13 [Actinobacillus minor NM305]
gi|257450372|gb|EEV24415.1| 50S ribosomal protein L13 [Actinobacillus minor 202]
gi|302649013|gb|EFL79201.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|302649531|gb|EFL79713.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306853802|gb|EFM86019.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306855939|gb|EFM88098.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306858153|gb|EFM90232.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306860454|gb|EFM92468.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306862714|gb|EFM94670.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306864873|gb|EFM96776.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306867225|gb|EFM99081.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306869237|gb|EFN01034.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306871456|gb|EFN03180.1| 50S ribosomal protein L13 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|322119702|gb|EFX91752.1| 50S ribosomal protein L13 [Actinobacillus ureae ATCC 25976]
gi|385695310|gb|EIG25872.1| ribosomal protein L13 [Haemophilus paraphrohaemolyticus HK411]
gi|386908790|gb|EIJ73476.1| ribosomal protein L13 [Haemophilus parahaemolyticus HK385]
gi|407388455|gb|AFU18948.1| 50S ribosomal protein L13 [Actinobacillus suis H91-0380]
Length = 142
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L + RKL+++ G+EH
Sbjct: 80 YVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGREMFRKLKVYAGNEH 130
>gi|86135105|ref|ZP_01053687.1| 50S ribosomal protein L13 [Polaribacter sp. MED152]
gi|85821968|gb|EAQ43115.1| 50S ribosomal protein L13 [Polaribacter sp. MED152]
Length = 151
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T E E+DPT I KAV MLP+N L R L ++ G EH
Sbjct: 85 YPGGQRSLTATEMFEKDPTRLIEKAVKGMLPKNTLGSALYRNLYVYAGGEH 135
>gi|381201422|ref|ZP_09908549.1| 50S ribosomal protein L13 [Sphingobium yanoikuyae XLDN2-5]
gi|427410742|ref|ZP_18900944.1| 50S ribosomal protein L13 [Sphingobium yanoikuyae ATCC 51230]
gi|425710730|gb|EKU73750.1| 50S ribosomal protein L13 [Sphingobium yanoikuyae ATCC 51230]
Length = 159
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE T ++ +E R P + KAV RM+PR L + R LRIF G+EHP
Sbjct: 85 YAGGIKETTPQKILEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFAGTEHP 137
>gi|315651029|ref|ZP_07904064.1| 50S ribosomal protein L13 [Lachnoanaerobaculum saburreum DSM 3986]
gi|419718273|ref|ZP_14245601.1| ribosomal protein L13 [Lachnoanaerobaculum saburreum F0468]
gi|315486712|gb|EFU77059.1| 50S ribosomal protein L13 [Lachnoanaerobaculum saburreum DSM 3986]
gi|383305569|gb|EIC96926.1| ribosomal protein L13 [Lachnoanaerobaculum saburreum F0468]
Length = 144
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G ++E TL+E + + P + AV MLP+ L D RKL ++ G H G + +P
Sbjct: 80 YVGGMRETTLRELLAKKPERVVELAVKGMLPKGPLGRDMYRKLHVYAGESH--GHQAQKP 137
Query: 89 YVM 91
VM
Sbjct: 138 VVM 140
>gi|326203860|ref|ZP_08193722.1| ribosomal protein L13 [Clostridium papyrosolvens DSM 2782]
gi|325985958|gb|EGD46792.1| ribosomal protein L13 [Clostridium papyrosolvens DSM 2782]
Length = 144
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 27 YRYI----GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YRY G LKE K ME+ P +AI AV MLP+N L RKL+++ GSEH
Sbjct: 74 YRYHTLHPGGLKEIKYKHLMEKHPEKAIELAVKGMLPKNSLGRQMYRKLKVYRGSEH 130
>gi|414173806|ref|ZP_11428433.1| 50S ribosomal protein L13 [Afipia broomeae ATCC 49717]
gi|410890440|gb|EKS38239.1| 50S ribosomal protein L13 [Afipia broomeae ATCC 49717]
Length = 154
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KERT K +E R P + KA+ RM+PR L + LR++ G+EHP
Sbjct: 80 FIGGIKERTAKSILEGRFPERVVEKAIERMIPRGPLGRVQLGNLRVYAGAEHP 132
>gi|296268587|ref|YP_003651219.1| 50S ribosomal protein L13 [Thermobispora bispora DSM 43833]
gi|296091374|gb|ADG87326.1| ribosomal protein L13 [Thermobispora bispora DSM 43833]
Length = 147
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ T +E M++ P + KAV MLP+N L +KL+++ G EHP + P
Sbjct: 80 YPGGLRSVTYEELMKKRPDRVVEKAVRGMLPKNSLGRKMAKKLKVYAGPEHPHQAQKPVP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|433645917|ref|YP_007290919.1| LSU ribosomal protein L13P [Mycobacterium smegmatis JS623]
gi|433295694|gb|AGB21514.1| LSU ribosomal protein L13P [Mycobacterium smegmatis JS623]
Length = 147
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F++ +N D++++S YR Y G L++R L ++M++ + +A+L M+P
Sbjct: 53 FVIVINADKVAISGDKLQNKYAYRHSGYPGGLRKRALGDEMQKHADRVVERAILGMIPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G EHP + PY
Sbjct: 113 KLGRQIQKKLKVYVGPEHPHTAQQPIPY 140
>gi|374263236|ref|ZP_09621788.1| 50S ribosomal protein L13 [Legionella drancourtii LLAP12]
gi|363536498|gb|EHL29940.1| 50S ribosomal protein L13 [Legionella drancourtii LLAP12]
Length = 144
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH +K + ++ R+P + I AV MLP+N L + RKL+++ GSEHP
Sbjct: 75 YRHTGHPGGIKSDSFEKLQARNPAKIIELAVKGMLPKNPLGREMYRKLKVYVGSEHP 131
>gi|357025401|ref|ZP_09087525.1| 50S ribosomal protein L13 [Mesorhizobium amorphae CCNWGS0123]
gi|355542645|gb|EHH11797.1| 50S ribosomal protein L13 [Mesorhizobium amorphae CCNWGS0123]
Length = 154
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 25 VSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
V Y + GH +KERT ++ +E R P + KAV RM+PR L + + LR++ G+EHP
Sbjct: 73 VYYWHTGHPGGIKERTARQLLEGRFPERVVEKAVERMIPRGPLGRRQMKNLRVYAGTEHP 132
>gi|319948369|ref|ZP_08022511.1| 50S ribosomal protein L13 [Dietzia cinnamea P4]
gi|319437967|gb|EFV92945.1| 50S ribosomal protein L13 [Dietzia cinnamea P4]
Length = 147
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
+ G LK +TL + M+ P + KAV MLP NKL KL+++ G +HP + P
Sbjct: 80 FPGGLKSQTLGKAMDTRPDRVVEKAVKGMLPSNKLGRAVASKLKVYAGPDHPHAAQQPVP 139
Query: 89 Y 89
+
Sbjct: 140 F 140
>gi|21223113|ref|NP_628892.1| 50S ribosomal protein L13 [Streptomyces coelicolor A3(2)]
gi|289769683|ref|ZP_06529061.1| 50S ribosomal protein L13 [Streptomyces lividans TK24]
gi|418471319|ref|ZP_13041146.1| 50S ribosomal protein L13 [Streptomyces coelicoflavus ZG0656]
gi|2500256|sp|Q53874.1|RL13_STRCO RecName: Full=50S ribosomal protein L13
gi|1155337|gb|AAC46060.1| ScoL13 [Streptomyces coelicolor A3(2)]
gi|3449246|emb|CAA20390.1| 50S ribosomal protein L13 [Streptomyces coelicolor A3(2)]
gi|289699882|gb|EFD67311.1| 50S ribosomal protein L13 [Streptomyces lividans TK24]
gi|371548064|gb|EHN76398.1| 50S ribosomal protein L13 [Streptomyces coelicoflavus ZG0656]
Length = 147
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ E ++++P +A+ KA+ MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDELLDKNPEKAVEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +P+
Sbjct: 113 SLGRQMLSKLKVYKGDQHPHGAQQPQPF 140
>gi|383785389|ref|YP_005469959.1| 50S ribosomal protein L13 [Leptospirillum ferrooxidans C2-3]
gi|383084302|dbj|BAM07829.1| ribosomal protein L13 [Leptospirillum ferrooxidans C2-3]
Length = 148
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G +E T E ER P + AV MLP+NKL +LRIFPG EH
Sbjct: 84 YPGGFRETTAGEMRERKPEYILSHAVKGMLPKNKLAKIYMTRLRIFPGPEH 134
>gi|334142978|ref|YP_004536190.1| 50S ribosomal protein L13 [Novosphingobium sp. PP1Y]
gi|359398926|ref|ZP_09191938.1| large subunit ribosomal protein L13 [Novosphingobium
pentaromativorans US6-1]
gi|333941014|emb|CCA94372.1| large subunit ribosomal protein L13 [Novosphingobium sp. PP1Y]
gi|357599680|gb|EHJ61387.1| large subunit ribosomal protein L13 [Novosphingobium
pentaromativorans US6-1]
Length = 159
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
Y G +KE T + + R P + KAV RM+PR L D+ R L ++ GSEHP G
Sbjct: 85 YAGGIKEVTADKVLAGRFPERVLEKAVERMIPRGPLGRDQMRALHVYAGSEHPHGG 140
>gi|85817893|gb|EAQ39061.1| 50S ribosomal protein L13 [Dokdonia donghaensis MED134]
Length = 151
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 17 LSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
LS N SY Y G + T +E ++DPT + AV MLP+NKL R L+
Sbjct: 69 LSGNKWTEKSYIRHTGYPGGQRSLTARELYDKDPTRVVEAAVKGMLPKNKLGSAIFRNLK 128
Query: 73 IFPGSEH 79
++ G+EH
Sbjct: 129 VYAGAEH 135
>gi|345891716|ref|ZP_08842553.1| 50S ribosomal protein L13 [Desulfovibrio sp. 6_1_46AFAA]
gi|345047929|gb|EGW51778.1| 50S ribosomal protein L13 [Desulfovibrio sp. 6_1_46AFAA]
Length = 144
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
++G LK TL + + P+ + AV MLP+N+L +KL+++ G EHP + +P
Sbjct: 80 WVGGLKTTTLGDVLADKPSRVLTAAVRGMLPKNRLGRAILKKLKVYAGPEHPHMAQNPQP 139
Query: 89 YVMP 92
+P
Sbjct: 140 LTLP 143
>gi|317126895|ref|YP_004093177.1| 50S ribosomal protein L13 [Bacillus cellulosilyticus DSM 2522]
gi|315471843|gb|ADU28446.1| ribosomal protein L13 [Bacillus cellulosilyticus DSM 2522]
Length = 145
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
+Y G LK T +E +++ P + A+ MLP+N L + KL ++ GSEHP
Sbjct: 80 QYPGSLKTTTAQEMLDKKPERVLELAIKGMLPKNSLGRKQGMKLHVYAGSEHPH 133
>gi|292670936|ref|ZP_06604362.1| 50S ribosomal protein L13 [Selenomonas noxia ATCC 43541]
gi|292647557|gb|EFF65529.1| 50S ribosomal protein L13 [Selenomonas noxia ATCC 43541]
Length = 141
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + +ER PT I AV MLP+N L RKL ++ G EHP + EP
Sbjct: 76 YQGGTTFTTAGQMLERFPTRVIEHAVKGMLPKNSLGAQIFRKLNVYVGPEHPHAAQKPEP 135
>gi|260906025|ref|ZP_05914347.1| 50S ribosomal protein L13 [Brevibacterium linens BL2]
Length = 147
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK E + +P A+ KAV M+P+ +L + +KL+++ G EHP + +P
Sbjct: 80 YPGGLKSVNYAELLATNPERAVEKAVGGMVPKTRLGRAQMQKLKVYQGGEHPHAAQNPQP 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|68264434|emb|CAI37922.1| 50S ribosomal protein L13 [Corynebacterium jeikeium K411]
Length = 190
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK +L +E P + +AV M+P NKL +KLR+F G EH F + E
Sbjct: 123 YPGGLKTMSLGRSLELHPERVVEEAVKGMMPHNKLSRASIKKLRVFAGPEHTFEAQKPET 182
Query: 89 Y 89
Y
Sbjct: 183 Y 183
>gi|297564071|ref|YP_003683044.1| 50S ribosomal protein L13 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848520|gb|ADH70538.1| ribosomal protein L13 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 149
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L+ + + +E++P A+ KAV MLP+
Sbjct: 53 FVIVVNADKVALTGKKLEQKRAYRHSGYPGGLRSVSYADLLEKNPERAVEKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G EHP
Sbjct: 113 SLGRQMAKKLKVYAGPEHP 131
>gi|296138599|ref|YP_003645842.1| 50S ribosomal protein L13 [Tsukamurella paurometabola DSM 20162]
gi|296026733|gb|ADG77503.1| ribosomal protein L13 [Tsukamurella paurometabola DSM 20162]
Length = 148
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 31 GHLKERTLKEQM-ERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G L R++ E + ++P ++KAVL M+P+NKL KL+++ G HP + PY
Sbjct: 82 GGLSSRSVGEVLGSKNPERVVQKAVLGMIPKNKLGSAIGGKLKVYAGPNHPHTAQQPVPY 141
>gi|152991351|ref|YP_001357073.1| 50S ribosomal protein L13 [Nitratiruptor sp. SB155-2]
gi|166231003|sp|A6Q5F7.1|RL13_NITSB RecName: Full=50S ribosomal protein L13
gi|151423212|dbj|BAF70716.1| 50S ribosomal protein L13 [Nitratiruptor sp. SB155-2]
Length = 139
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K L E E++P + + A MLP+ KL +KL+++PGSEHP
Sbjct: 80 YFGGVKSEKLAELREKNPEKLFKLATRGMLPKTKLGRAMLKKLKVYPGSEHP 131
>gi|357032710|ref|ZP_09094645.1| 50S ribosomal protein L13 [Gluconobacter morbifer G707]
gi|356413701|gb|EHH67353.1| 50S ribosomal protein L13 [Gluconobacter morbifer G707]
Length = 220
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPL 86
Y G +KERT+ +++ ++P + KAV RM+ R L+ + + L ++ GSEHP G +P+
Sbjct: 144 YPGGIKERTITQRLTGKNPGNVVEKAVERMITRGPLQRAQMKHLHVYAGSEHPHDGQKPV 203
Query: 87 E 87
+
Sbjct: 204 K 204
>gi|302388051|ref|YP_003823873.1| 50S ribosomal protein L13 [Clostridium saccharolyticum WM1]
gi|302198679|gb|ADL06250.1| ribosomal protein L13 [Clostridium saccharolyticum WM1]
Length = 144
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E M + P + + AV MLP+ L KL ++ G+EH
Sbjct: 80 YVGGMKETTLREMMAKKPEKVMELAVKGMLPKGPLGRSMITKLHVYAGAEH 130
>gi|261868101|ref|YP_003256023.1| 50S ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415768560|ref|ZP_11483823.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416051750|ref|ZP_11577798.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|416104131|ref|ZP_11589744.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|418464328|ref|ZP_13035268.1| 50S ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|444345563|ref|ZP_21153576.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261413433|gb|ACX82804.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|347993183|gb|EGY34560.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|348007490|gb|EGY47796.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657893|gb|EGY75473.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|359757124|gb|EHK91280.1| 50S ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|443542772|gb|ELT53073.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
>gi|251792610|ref|YP_003007336.1| 50S ribosomal protein L13 [Aggregatibacter aphrophilus NJ8700]
gi|416891848|ref|ZP_11923395.1| 50S ribosomal protein L13 [Aggregatibacter aphrophilus ATCC 33389]
gi|422336162|ref|ZP_16417135.1| 50S ribosomal protein L13 [Aggregatibacter aphrophilus F0387]
gi|247534003|gb|ACS97249.1| ribosomal protein L13 [Aggregatibacter aphrophilus NJ8700]
gi|347815396|gb|EGY32036.1| 50S ribosomal protein L13 [Aggregatibacter aphrophilus ATCC 33389]
gi|353346348|gb|EHB90633.1| 50S ribosomal protein L13 [Aggregatibacter aphrophilus F0387]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
>gi|212702440|ref|ZP_03310568.1| hypothetical protein DESPIG_00457 [Desulfovibrio piger ATCC 29098]
gi|212674101|gb|EEB34584.1| ribosomal protein L13 [Desulfovibrio piger ATCC 29098]
Length = 144
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
++G LK +L + + P + AV MLP+N+L +KL+I+ G EHP + +P
Sbjct: 80 WVGGLKTTSLGDMLASKPERVLMAAVRGMLPKNRLGRAMLKKLKIYAGPEHPHTAQNPQP 139
Query: 89 YVMP 92
+P
Sbjct: 140 LTLP 143
>gi|365825988|ref|ZP_09367936.1| 50S ribosomal protein L13 [Actinomyces graevenitzii C83]
gi|365257469|gb|EHM87513.1| 50S ribosomal protein L13 [Actinomyces graevenitzii C83]
Length = 147
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + + ++YR+ G L + +E + P A+ KA+ M+P N
Sbjct: 53 YVIIINADKVALTNGKADKKIAYRHSGRPGGLTATSYRELLATRPEFAVEKAIKGMIPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL + +KL+++ GSEHP
Sbjct: 113 KLGRAQLKKLKVYSGSEHP 131
>gi|417841553|ref|ZP_12487656.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19501]
gi|417842003|ref|ZP_12488098.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19501]
gi|341947783|gb|EGT74424.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19501]
gi|341948774|gb|EGT75389.1| 50S ribosomal protein L13 [Haemophilus haemolyticus M19501]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
>gi|171741284|ref|ZP_02917091.1| hypothetical protein BIFDEN_00359 [Bifidobacterium dentium ATCC
27678]
gi|283455356|ref|YP_003359920.1| 50S ribosomal protein L13 [Bifidobacterium dentium Bd1]
gi|306823577|ref|ZP_07456952.1| 50S ribosomal protein L13 [Bifidobacterium dentium ATCC 27679]
gi|309803051|ref|ZP_07697152.1| ribosomal protein L13 [Bifidobacterium dentium JCVIHMP022]
gi|171276898|gb|EDT44559.1| ribosomal protein L13 [Bifidobacterium dentium ATCC 27678]
gi|283101990|gb|ADB09096.1| rplM 50S ribosomal protein L13 [Bifidobacterium dentium Bd1]
gi|304553284|gb|EFM41196.1| 50S ribosomal protein L13 [Bifidobacterium dentium ATCC 27679]
gi|308220518|gb|EFO76829.1| ribosomal protein L13 [Bifidobacterium dentium JCVIHMP022]
Length = 149
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L+ + E +E+DP IR A+ MLP+N+L + +LRIF G+EHP
Sbjct: 81 GGLRRDSYAELLEKDPERIIRSAIKGMLPKNRLAKVQLGRLRIFRGAEHP 130
>gi|320531320|ref|ZP_08032294.1| ribosomal protein L13 [Actinomyces sp. oral taxon 171 str. F0337]
gi|320136469|gb|EFW28443.1| ribosomal protein L13 [Actinomyces sp. oral taxon 171 str. F0337]
Length = 147
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + +YR+ GH L + +E + P A+ KAV M+P
Sbjct: 53 YVVIINADKVALTNGKADKKFAYRHSGHPGGLTAVSYRELLATRPERAVEKAVKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
KL + +KL+++ G+EHP +
Sbjct: 113 KLGRAQLKKLKVYAGAEHPHASQ 135
>gi|225023788|ref|ZP_03712980.1| hypothetical protein EIKCOROL_00652 [Eikenella corrodens ATCC
23834]
gi|224943443|gb|EEG24652.1| hypothetical protein EIKCOROL_00652 [Eikenella corrodens ATCC
23834]
Length = 142
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ L + +E + YR+ G + +RT +E ++ P A+ +AV MLP+
Sbjct: 53 YIIVVNAGKLRVTGDKNEGKIYYRHSGFPGGIYQRTFREMQDKFPGRALEQAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ GSEH
Sbjct: 113 PLGYAMIRKLKVYAGSEH 130
>gi|395238119|ref|ZP_10416093.1| 50S ribosomal protein L13 [Turicella otitidis ATCC 51513]
gi|423351588|ref|ZP_17329219.1| 50S ribosomal protein L13 [Turicella otitidis ATCC 51513]
gi|394486490|emb|CCI84181.1| 50S ribosomal protein L13 [Turicella otitidis ATCC 51513]
gi|404386395|gb|EJZ81556.1| 50S ribosomal protein L13 [Turicella otitidis ATCC 51513]
Length = 147
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK TL + + P + ++V M+P NKL +KL +F EHP+ + E
Sbjct: 80 YPGGLKSMTLGDALNTHPARTVEESVRGMMPHNKLSRASIKKLHVFAEGEHPYAGQKPEN 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|365967882|ref|YP_004949444.1| 50S ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|387119940|ref|YP_006285823.1| 50S ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763418|ref|ZP_11482106.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416038271|ref|ZP_11574093.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416044572|ref|ZP_11575063.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416057448|ref|ZP_11580204.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|416068828|ref|ZP_11582953.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|416076511|ref|ZP_11585548.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|416085420|ref|ZP_11587166.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|429732637|ref|ZP_19267235.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans Y4]
gi|444335064|ref|ZP_21150416.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|444344444|ref|ZP_21152707.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|347995089|gb|EGY36303.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347996135|gb|EGY37250.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|348000736|gb|EGY41510.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348000794|gb|EGY41562.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|348004799|gb|EGY45292.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348010223|gb|EGY50293.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|348654585|gb|EGY70191.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|365746795|gb|AEW77700.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|385874432|gb|AFI85991.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155658|gb|EKX98320.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans Y4]
gi|443544121|gb|ELT54181.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|443549529|gb|ELT58291.1| ribosomal protein L13 [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGAEH 130
>gi|227549884|ref|ZP_03979933.1| 50S ribosomal protein L13 [Corynebacterium lipophiloflavum DSM
44291]
gi|227078030|gb|EEI15993.1| 50S ribosomal protein L13 [Corynebacterium lipophiloflavum DSM
44291]
Length = 147
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+V+ + I S E + YR Y G LK TL ++ P + +AV M+P N
Sbjct: 53 HVIVINADKVHISSNKREREMRYRHSGYPGGLKSMTLGRALDERPDRVVEEAVRGMMPHN 112
Query: 62 KLRDDRDRKLRIFPGSEHPF 81
+L +KL +F GSEHP+
Sbjct: 113 RLSRQSIKKLHVFVGSEHPY 132
>gi|422343719|ref|ZP_16424646.1| 50S ribosomal protein L13 [Selenomonas noxia F0398]
gi|355378135|gb|EHG25326.1| 50S ribosomal protein L13 [Selenomonas noxia F0398]
Length = 146
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + +ER PT I AV MLP+N L RKL ++ G EHP + EP
Sbjct: 81 YQGGTTFTTAGQMLERFPTRVIEHAVKGMLPKNSLGAQIFRKLNVYVGPEHPHAAQKPEP 140
>gi|332291327|ref|YP_004429936.1| 50S ribosomal protein L13 [Krokinobacter sp. 4H-3-7-5]
gi|332169413|gb|AEE18668.1| ribosomal protein L13 [Krokinobacter sp. 4H-3-7-5]
Length = 151
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 17 LSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
LS N SY Y G + T +E ++DPT + AV MLP+NKL R L+
Sbjct: 69 LSGNKWTEKSYIRHTGYPGGQRSLTARELYDKDPTRVVEAAVKGMLPKNKLGSAIFRNLK 128
Query: 73 IFPGSEH 79
++ G+EH
Sbjct: 129 VYAGAEH 135
>gi|260654133|ref|ZP_05859623.1| ribosomal protein L13 [Jonquetella anthropi E3_33 E1]
gi|424845495|ref|ZP_18270106.1| ribosomal protein L13, bacterial type [Jonquetella anthropi DSM
22815]
gi|260631118|gb|EEX49312.1| ribosomal protein L13 [Jonquetella anthropi E3_33 E1]
gi|363986933|gb|EHM13763.1| ribosomal protein L13, bacterial type [Jonquetella anthropi DSM
22815]
Length = 144
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH KE T E M++D T + + V MLP+++L +RKL+++ G++HP
Sbjct: 79 YRHSGHPGGFKETTYAEMMQKDSTRLVERIVRGMLPKSRLH--FERKLKVYAGADHP 133
>gi|134103210|ref|YP_001108871.1| 50S ribosomal protein L13 [Saccharopolyspora erythraea NRRL 2338]
gi|291003846|ref|ZP_06561819.1| 50S ribosomal protein L13 [Saccharopolyspora erythraea NRRL 2338]
gi|166199615|sp|A4FPH1.1|RL13_SACEN RecName: Full=50S ribosomal protein L13
gi|133915833|emb|CAM05946.1| 50S ribosomal protein L13 [Saccharopolyspora erythraea NRRL 2338]
Length = 148
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N ++L + + YR Y G L++++ + +++ P + KA+ MLP+N
Sbjct: 53 FVVVVNAEKVALTGNKRDQAFHYRHSGYPGGLRKQSFGQVLDKHPERLLEKAIKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
KL +KL+++ G EHP + +P+
Sbjct: 113 KLGRAMGKKLKVYAGPEHPHQAQNPQPF 140
>gi|325288608|ref|YP_004264789.1| 50S ribosomal protein L13 [Syntrophobotulus glycolicus DSM 8271]
gi|324964009|gb|ADY54788.1| LSU ribosomal protein L13P [Syntrophobotulus glycolicus DSM 8271]
Length = 143
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK+ T + M + P A+ AV MLP NKL +KL ++ G EHP + E
Sbjct: 80 YPGGLKQMTYRVLMNKRPERAVEHAVKGMLPHNKLGAAMYKKLHVYQGPEHPHQAQKPEV 139
Query: 89 YVM 91
+ M
Sbjct: 140 WTM 142
>gi|319784118|ref|YP_004143594.1| 50S ribosomal protein L13 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170006|gb|ADV13544.1| ribosomal protein L13 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 154
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 25 VSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
V Y + GH +KERT ++ +E R P + KAV RM+PR L + + LR++ G+EHP
Sbjct: 73 VYYWHTGHPGGIKERTARQLLEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGAEHP 132
>gi|336430374|ref|ZP_08610322.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018358|gb|EGN48107.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE+M + P + I AV MLP+ L KL ++ G +H
Sbjct: 80 YVGGMKEVTLKEKMAKKPEQVIELAVKGMLPKGPLGRQMYTKLHVYAGPDH 130
>gi|94676989|ref|YP_588510.1| 50S ribosomal protein L13 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|118573380|sp|Q1LU54.1|RL13_BAUCH RecName: Full=50S ribosomal protein L13
gi|94220139|gb|ABF14298.1| ribosomal protein L13 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L+D+ Y ++G +KE+ LK+ M + P I +AV MLP+ L +KL+++ G+
Sbjct: 69 LSDKKYYHYTGFVGGIKEQNLKDLMTKRPEYVIERAVKGMLPKGALGKAMLKKLKVYAGT 128
Query: 78 EH 79
EH
Sbjct: 129 EH 130
>gi|103485739|ref|YP_615300.1| 50S ribosomal protein L13 [Sphingopyxis alaskensis RB2256]
gi|98975816|gb|ABF51967.1| LSU ribosomal protein L13P [Sphingopyxis alaskensis RB2256]
Length = 159
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KE + + +E R P + KAV RM+PR L + R LRIF GSEHP G P
Sbjct: 85 YAGGIKETSPAKILEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFAGSEHPHEGQNP 143
>gi|329938201|ref|ZP_08287652.1| 50S ribosomal protein L13 [Streptomyces griseoaurantiacus M045]
gi|329302690|gb|EGG46580.1| 50S ribosomal protein L13 [Streptomyces griseoaurantiacus M045]
Length = 147
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L+ ++YR Y G L+ + ++++P +AI KAV MLP+N
Sbjct: 53 FVIIINADKVHLSGNKRTQKMAYRHSGYPGGLRSVRYDDLLDKNPEKAIEKAVKGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L KL+++ G +HP G + +P+
Sbjct: 113 TLGRQMLSKLKVYKGDQHPHGAQQPQPF 140
>gi|54022833|ref|YP_117075.1| 50S ribosomal protein L13 [Nocardia farcinica IFM 10152]
gi|81680278|sp|Q5Z1I0.1|RL13_NOCFA RecName: Full=50S ribosomal protein L13
gi|54014341|dbj|BAD55711.1| putative ribosomal protein L13 [Nocardia farcinica IFM 10152]
Length = 147
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
G LK RT+ + +E P + KAV M+P+NKL + KL+++ G HP + P+
Sbjct: 82 GGLKSRTVGQVLETRPERLVEKAVKGMIPKNKLGNAIAGKLKVYAGPNHPHAAQQPVPF 140
>gi|303327421|ref|ZP_07357862.1| ribosomal protein L13 [Desulfovibrio sp. 3_1_syn3]
gi|302862361|gb|EFL85294.1| ribosomal protein L13 [Desulfovibrio sp. 3_1_syn3]
Length = 144
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
++G LK TL + + P+ + AV MLP+N+L +KL+++ G EHP + +P
Sbjct: 80 WVGGLKTTTLGDVLADKPSRVLTAAVRGMLPKNRLGRAILKKLKVYAGPEHPHMAQNPQP 139
Query: 89 YVMP 92
+P
Sbjct: 140 LTLP 143
>gi|291549025|emb|CBL25287.1| LSU ribosomal protein L13P [Ruminococcus torques L2-14]
Length = 142
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL E + + P + I AV MLP+ + D +KL ++ G EH
Sbjct: 80 YVGGMKETTLAELLAKKPEKVIELAVKGMLPKGPMGRDMIKKLHVYAGPEH 130
>gi|225848269|ref|YP_002728432.1| 50S ribosomal protein L13 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644499|gb|ACN99549.1| ribosomal protein L13 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 150
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
G LK R+L+ +E PT A+ AV RMLP+NKL+ ++L+++ G EH
Sbjct: 82 GGLKVRSLQWMIENRPTRALELAVERMLPKNKLQKRYMKRLKLYTGEEH 130
>gi|337288273|ref|YP_004627745.1| 50S ribosomal protein L13 [Thermodesulfobacterium sp. OPB45]
gi|334902011|gb|AEH22817.1| ribosomal protein L13 [Thermodesulfobacterium geofontis OPF15]
Length = 148
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF---GDRP 85
Y+G LK T ++ +ER P + I AV RMLPRN++R +KL+I+ G HP +P
Sbjct: 86 YMGGLKLETARKLLERKPEQLIYLAVKRMLPRNRMRKKLLKKLKIYAGESHPHTAQNPKP 145
Query: 86 LE 87
LE
Sbjct: 146 LE 147
>gi|269218946|ref|ZP_06162800.1| ribosomal protein L13 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212057|gb|EEZ78397.1| ribosomal protein L13 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 147
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + E +Y Y G L+ + E + + P A+ KAV MLP+N
Sbjct: 53 YVIVINADKVALTGSKLEQKFAYHHSGYPGGLRATSYTELLAKHPERAVVKAVRGMLPKN 112
Query: 62 KLRDDRDRKLRIFPGSEHPF-GDRP 85
+L + KL+++ G+EHP G +P
Sbjct: 113 RLGRKQLAKLKVYAGTEHPHAGQKP 137
>gi|225681407|gb|EEH19691.1| 50S ribosomal protein L13 [Paracoccidioides brasiliensis Pb03]
Length = 178
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE-- 87
G LK T+ + E+ E +RKAV MLP+N+LR+ R +L+ F G HP+ L+
Sbjct: 85 GSLKSMTMDKMFEKWGGAEVLRKAVRGMLPKNRLREKRLARLKAFEGHAHPYKKNILKLG 144
Query: 88 -PYVMPPRRVRELRPRVRRAMIREQKKAE 115
V+ P+ P V+ +E+ +E
Sbjct: 145 GKSVLGPQTSIADSPLVKETFAKEKGVSE 173
>gi|13476982|ref|NP_108552.1| 50S ribosomal protein L13 [Mesorhizobium loti MAFF303099]
gi|337269343|ref|YP_004613398.1| 50S ribosomal protein L13 [Mesorhizobium opportunistum WSM2075]
gi|433775733|ref|YP_007306200.1| ribosomal protein L13, bacterial type [Mesorhizobium australicum
WSM2073]
gi|81776097|sp|Q982W8.1|RL13_RHILO RecName: Full=50S ribosomal protein L13
gi|14027745|dbj|BAB54338.1| ribosomal protein L13 [Mesorhizobium loti MAFF303099]
gi|336029653|gb|AEH89304.1| ribosomal protein L13 [Mesorhizobium opportunistum WSM2075]
gi|433667748|gb|AGB46824.1| ribosomal protein L13, bacterial type [Mesorhizobium australicum
WSM2073]
Length = 154
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 25 VSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
V Y + GH +KERT ++ +E R P + KAV RM+PR L + + LR++ G+EHP
Sbjct: 73 VYYWHTGHPGGIKERTARQLLEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGAEHP 132
>gi|313891635|ref|ZP_07825242.1| ribosomal protein L13 [Dialister microaerophilus UPII 345-E]
gi|313119913|gb|EFR43098.1| ribosomal protein L13 [Dialister microaerophilus UPII 345-E]
Length = 146
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K E + + P + A+ MLP+NKL D RKL+++ GSEHP
Sbjct: 81 YPGGDKFTKAGEALRKKPAWVLEHAIRGMLPKNKLGDQMFRKLKVYAGSEHP 132
>gi|404495465|ref|YP_006719571.1| 50S ribosomal protein L13 [Geobacter metallireducens GS-15]
gi|418068144|ref|ZP_12705459.1| ribosomal protein L13 [Geobacter metallireducens RCH3]
gi|118573404|sp|Q39Y25.1|RL13_GEOMG RecName: Full=50S ribosomal protein L13
gi|78193082|gb|ABB30849.1| ribosomal protein L13 [Geobacter metallireducens GS-15]
gi|373557515|gb|EHP83924.1| ribosomal protein L13 [Geobacter metallireducens RCH3]
Length = 143
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M S+ + G +K + +E+ P + IRKAV MLP+NKL +KL+++ G
Sbjct: 70 LADKMYYSHSGFPGGIKSIAAGKLIEKKPEDLIRKAVKGMLPKNKLARHMLKKLKVYAGP 129
Query: 78 EHP 80
HP
Sbjct: 130 AHP 132
>gi|384097728|ref|ZP_09998848.1| 50S ribosomal protein L13 [Imtechella halotolerans K1]
gi|383836610|gb|EID76017.1| 50S ribosomal protein L13 [Imtechella halotolerans K1]
Length = 151
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G +E + K+ + ++P + K++ MLP+NKL D R L+++ GSEH
Sbjct: 85 YPGGQRETSAKQLLAKNPARIVEKSIKGMLPKNKLGADLFRNLKVYEGSEH 135
>gi|335040763|ref|ZP_08533885.1| ribosomal protein L13 [Caldalkalibacillus thermarum TA2.A1]
gi|334179338|gb|EGL81981.1| ribosomal protein L13 [Caldalkalibacillus thermarum TA2.A1]
Length = 143
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
RY G LK+ T E ++ P I AV MLP+ L + +KL ++ GSEHP
Sbjct: 80 RYPGGLKKFTAAEMLQNKPERVIESAVKGMLPKGPLGRKQAKKLFVYAGSEHP 132
>gi|334143277|ref|YP_004536433.1| 50S ribosomal protein L13 [Thioalkalimicrobium cyclicum ALM1]
gi|333964188|gb|AEG30954.1| ribosomal protein L13 [Thioalkalimicrobium cyclicum ALM1]
Length = 142
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG+LK + ++ ++ P + A+ MLPR L D RKL+++ G+EHP
Sbjct: 80 YIGNLKSMSFEKMIDSRPERVLELAIKGMLPRGPLGRDMYRKLKVYAGTEHP 131
>gi|334127929|ref|ZP_08501831.1| 50S ribosomal protein L13 [Centipeda periodontii DSM 2778]
gi|333388650|gb|EGK59824.1| 50S ribosomal protein L13 [Centipeda periodontii DSM 2778]
Length = 141
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + +ER PT I AV MLP+N L RKL ++ G EHP + EP
Sbjct: 76 YQGGTTFTTAGQMLERFPTRVIEHAVKGMLPKNSLGAQIFRKLNVYVGPEHPHAAQKPEP 135
>gi|427430635|ref|ZP_18920397.1| LSU ribosomal protein L13p (L13Ae) [Caenispirillum salinarum AK4]
gi|425878604|gb|EKV27318.1| LSU ribosomal protein L13p (L13Ae) [Caenispirillum salinarum AK4]
Length = 154
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+ G +KERT+++ + R P I+KAV RM+PR L + +KLR++ G+EHP
Sbjct: 80 FPGGIKERTMEQILGGRYPERVIQKAVERMMPRGPLGRAQLKKLRVYAGAEHP 132
>gi|406969189|gb|EKD93889.1| 50S ribosomal protein L13 [uncultured bacterium]
Length = 148
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 7 VFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
V I N +L+ N YR Y+G+LKE K+ +++ P I +AV MLP+NK
Sbjct: 59 VIVINANKVLLTGNKMEDKLYRRHSGYLGNLKEEPAKDILKKHPKRVIEEAVKGMLPKNK 118
Query: 63 LRDDRDRKLRIFPGSEHP-FGDRP 85
L+ ++KL ++ ++H G P
Sbjct: 119 LKKHFEKKLYVYADADHKHLGQNP 142
>gi|296532946|ref|ZP_06895604.1| 50S ribosomal protein L13 [Roseomonas cervicalis ATCC 49957]
gi|296266727|gb|EFH12694.1| 50S ribosomal protein L13 [Roseomonas cervicalis ATCC 49957]
Length = 156
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPR 60
+VV + + E SV Y + G+ +K RT++E++E R P I KAV RM+ R
Sbjct: 56 HVVIVNADKVRVTGAKSEQSVFYWHTGYPGGIKGRTIRERLEGRFPERVIEKAVERMITR 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF-GDRP 85
L + + L ++ G+EHP G +P
Sbjct: 116 GPLGRKQMKNLHVYAGAEHPHAGAQP 141
>gi|218962151|ref|YP_001741926.1| 50S ribosomal subunit protein L13 [Candidatus Cloacamonas
acidaminovorans]
gi|167730808|emb|CAO81720.1| 50S ribosomal subunit protein L13 [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 142
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 33 LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
LKE + +E+ P I AV M+P+NKL +KL+++PG+EHP +P+E
Sbjct: 84 LKEIPYAKVLEKHPERIIEHAVKGMMPKNKLGRAMFKKLKVYPGAEHPHSAQKPIE 139
>gi|319897076|ref|YP_004135271.1| 50S ribosomal protein L13 [Haemophilus influenzae F3031]
gi|317432580|emb|CBY80940.1| 50S ribosomal subunit protein L13 [Haemophilus influenzae F3031]
Length = 142
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMFRKLKVYVGAEH 130
>gi|403510185|ref|YP_006641823.1| ribosomal protein L13 [Nocardiopsis alba ATCC BAA-2165]
gi|402798632|gb|AFR06042.1| ribosomal protein L13 [Nocardiopsis alba ATCC BAA-2165]
Length = 126
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L+ + +E++P AI KA+ MLP+
Sbjct: 30 FVIIVNAEKVALTGNKLEQKRAYRHSGYPGGLRSVAYADLLEKNPERAIEKAIKGMLPKG 89
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G EHP
Sbjct: 90 TLGRQMAKKLKVYAGPEHP 108
>gi|347754103|ref|YP_004861667.1| 50S ribosomal protein L13 [Candidatus Chloracidobacterium
thermophilum B]
gi|347586621|gb|AEP11151.1| LSU ribosomal protein L13P [Candidatus Chloracidobacterium
thermophilum B]
Length = 189
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+E K+ + R PT ++ A++ MLP+ KL +KLRI+ G HP + EP
Sbjct: 120 YPGGLREIRAKDLLARFPTRILQHAIVGMLPKTKLGRQMAKKLRIYAGPNHPHQAQRPEP 179
Query: 89 YVM 91
V+
Sbjct: 180 LVL 182
>gi|342213823|ref|ZP_08706542.1| ribosomal protein L13 [Veillonella sp. oral taxon 780 str. F0422]
gi|341597411|gb|EGS39970.1| ribosomal protein L13 [Veillonella sp. oral taxon 780 str. F0422]
Length = 146
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G + TL +E+ P I AV MLP+NKL + RKL ++ G+EHP
Sbjct: 81 YPGGSRFTTLAMMLEKHPERVIEMAVKGMLPKNKLGAQQYRKLNVYAGAEHP 132
>gi|329122062|ref|ZP_08250670.1| 50S ribosomal protein L13 [Dialister micraerophilus DSM 19965]
gi|327466869|gb|EGF12385.1| 50S ribosomal protein L13 [Dialister micraerophilus DSM 19965]
Length = 155
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K E + + P + A+ MLP+NKL D RKL+++ GSEHP
Sbjct: 90 YPGGDKFTKAGEALRKKPVWVLEHAIRGMLPKNKLGDQMFRKLKVYAGSEHP 141
>gi|311103881|ref|YP_003976734.1| 50S ribosomal protein L13 [Achromobacter xylosoxidans A8]
gi|310758570|gb|ADP14019.1| ribosomal protein L13 [Achromobacter xylosoxidans A8]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++E ++ ER P AI+KAV MLP+ L +KL+++ G+EHP
Sbjct: 80 YPGGIRETNFEKMQERFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHP 131
>gi|401565457|ref|ZP_10806295.1| ribosomal protein L13 [Selenomonas sp. FOBRC6]
gi|400187206|gb|EJO21402.1| ribosomal protein L13 [Selenomonas sp. FOBRC6]
Length = 146
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + + R PT I AV MLP+N L RKL ++ GSEHP + EP
Sbjct: 81 YQGGTTFTTAGDMLRRFPTRVIEHAVKGMLPKNSLGAQIFRKLNVYVGSEHPHAAQKPEP 140
>gi|161898750|ref|YP_190891.2| 50S ribosomal protein L13 [Gluconobacter oxydans 621H]
Length = 157
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
G +KERT+ +++ ++P E + KAV RM+ R L+ + + L ++ GSEHP G +P++
Sbjct: 83 GGIKERTITQRLTGKNPGEVVEKAVERMITRGPLQRAQMKHLYVYAGSEHPHDGQKPVK 141
>gi|378778602|ref|YP_005187041.1| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52630024|gb|AAU28765.1| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364509417|gb|AEW52941.1| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 152
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G +K + ++ +++PT+ I AV MLP+N L + RKL+++ GSEHP
Sbjct: 90 GGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHP 139
>gi|163840482|ref|YP_001624887.1| 50S ribosomal protein L13 [Renibacterium salmoninarum ATCC 33209]
gi|189041016|sp|A9WMG0.1|RL13_RENSM RecName: Full=50S ribosomal protein L13
gi|162953958|gb|ABY23473.1| LSU ribosomal protein L13P [Renibacterium salmoninarum ATCC 33209]
Length = 147
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E +YR Y G L E +E++P A+ KA+ MLP+
Sbjct: 53 FVIIINAEKVALTGAKLEQKRAYRHSGYPGGLSSVNYAELLEKNPVRAVEKAIKGMLPKT 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ G+EHP
Sbjct: 113 SLAAQQLSKLKVYRGAEHP 131
>gi|359798013|ref|ZP_09300591.1| 50S ribosomal protein L13 [Achromobacter arsenitoxydans SY8]
gi|359364025|gb|EHK65744.1| 50S ribosomal protein L13 [Achromobacter arsenitoxydans SY8]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++E ++ ER P AI+KAV MLP+ L +KL+++ G+EHP
Sbjct: 80 YPGGIRETNFEKMQERFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHP 131
>gi|293603312|ref|ZP_06685740.1| 50S ribosomal protein L13 [Achromobacter piechaudii ATCC 43553]
gi|421485750|ref|ZP_15933305.1| 50S ribosomal protein L13 [Achromobacter piechaudii HLE]
gi|422322482|ref|ZP_16403523.1| 50S ribosomal protein L13 [Achromobacter xylosoxidans C54]
gi|423015540|ref|ZP_17006261.1| 50S ribosomal protein L13 [Achromobacter xylosoxidans AXX-A]
gi|292818222|gb|EFF77275.1| 50S ribosomal protein L13 [Achromobacter piechaudii ATCC 43553]
gi|317402589|gb|EFV83151.1| 50S ribosomal protein L13 [Achromobacter xylosoxidans C54]
gi|338781439|gb|EGP45829.1| 50S ribosomal protein L13 [Achromobacter xylosoxidans AXX-A]
gi|400196062|gb|EJO29043.1| 50S ribosomal protein L13 [Achromobacter piechaudii HLE]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V ++ + + +R Y G ++E ++ ER P AI+KAV MLP+
Sbjct: 53 YIVIINASDIVVTGTKAKDKKYFRHTTYPGGIRETNFEKMQERFPGRAIQKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 PLGYAMIKKLKVYAGAEHP 131
>gi|284033958|ref|YP_003383889.1| 50S ribosomal protein L13 [Kribbella flavida DSM 17836]
gi|283813251|gb|ADB35090.1| ribosomal protein L13 [Kribbella flavida DSM 17836]
Length = 147
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 25 VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++YR Y G L + E + +DP + + KAV MLP+N+L KL+++ G EHP
Sbjct: 73 LAYRHSGYPGGLTSTPVGELLAKDPRKVVEKAVWGMLPKNRLSRKLLTKLKVYAGPEHP 131
>gi|313889053|ref|ZP_07822711.1| ribosomal protein L13 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844926|gb|EFR32329.1| ribosomal protein L13 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G +E E ME+ P + I AV MLP+N+L +KL+++ GSEHP + E
Sbjct: 80 YPGGRREVVYAEMMEKRPEKVIELAVKGMLPKNRLGRKMIKKLKVYTGSEHPHTAQAPEV 139
Query: 89 Y 89
Y
Sbjct: 140 Y 140
>gi|312135752|ref|YP_004003090.1| 50S ribosomal protein L13 [Caldicellulosiruptor owensensis OL]
gi|311775803|gb|ADQ05290.1| ribosomal protein L13 [Caldicellulosiruptor owensensis OL]
Length = 142
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 21 DEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
D +Y G LK + +E+ P +AI AV MLP+NKLRD RKL+++ G HP
Sbjct: 72 DGYRYHTKYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNKLRDRFMRKLKVYRGPNHP 131
>gi|253827377|ref|ZP_04870262.1| 50S ribosomal protein L13 [Helicobacter canadensis MIT 98-5491]
gi|313141584|ref|ZP_07803777.1| 50S ribosomal protein L13 [Helicobacter canadensis MIT 98-5491]
gi|253510783|gb|EES89442.1| 50S ribosomal protein L13 [Helicobacter canadensis MIT 98-5491]
gi|313130615|gb|EFR48232.1| 50S ribosomal protein L13 [Helicobacter canadensis MIT 98-5491]
Length = 139
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TLKE +E+ P + + AV MLP+ KL +KL+++ S HP
Sbjct: 81 YFGSTKSKTLKEMLEKHPEKLYKLAVRGMLPKTKLGRAMIKKLKVYCDSNHP 132
>gi|197287472|ref|YP_002153344.1| 50S ribosomal protein L13 [Proteus mirabilis HI4320]
gi|227358267|ref|ZP_03842608.1| 50S ribosomal protein L13 [Proteus mirabilis ATCC 29906]
gi|425069317|ref|ZP_18472432.1| 50S ribosomal protein L13 [Proteus mirabilis WGLW6]
gi|425073802|ref|ZP_18476908.1| 50S ribosomal protein L13 [Proteus mirabilis WGLW4]
gi|226702893|sp|B4EXL9.1|RL13_PROMH RecName: Full=50S ribosomal protein L13
gi|194684959|emb|CAR47159.1| 50S ribosomal protein L13 [Proteus mirabilis HI4320]
gi|227161603|gb|EEI46640.1| 50S ribosomal protein L13 [Proteus mirabilis ATCC 29906]
gi|404595073|gb|EKA95628.1| 50S ribosomal protein L13 [Proteus mirabilis WGLW4]
gi|404597728|gb|EKA98223.1| 50S ribosomal protein L13 [Proteus mirabilis WGLW6]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + V YR+ GH +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGHKRTDKVYYRHTGHVGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGAEH 130
>gi|187479440|ref|YP_787465.1| 50S ribosomal protein L13 [Bordetella avium 197N]
gi|118573381|sp|Q2KV01.1|RL13_BORA1 RecName: Full=50S ribosomal protein L13
gi|115424027|emb|CAJ50580.1| 50S ribosomal protein L13 [Bordetella avium 197N]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V ++ + + +R Y G ++E ++ ER P AI+KAV MLP+
Sbjct: 53 YIVIINAADIVVTGKKSQDKKYFRHTTYPGGIRETNFEKMQERFPGRAIQKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 113 PLGYAMIKKLKVYAGAEHP 131
>gi|297618349|ref|YP_003703508.1| 50S ribosomal protein L13 [Syntrophothermus lipocalidus DSM 12680]
gi|297146186|gb|ADI02943.1| ribosomal protein L13 [Syntrophothermus lipocalidus DSM 12680]
Length = 144
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE 87
RY G L+E T ++ ++++P +A+ A+ MLP N+L +KL+++ G +HP + E
Sbjct: 79 RYPGGLREMTYRDLLDKNPEKAVEIAIKGMLPHNRLGKKMFKKLKVYRGPDHPHQAQKPE 138
Query: 88 PYVM 91
+++
Sbjct: 139 AWIL 142
>gi|408501573|ref|YP_006865492.1| 50S ribosomal protein L13 [Bifidobacterium asteroides PRL2011]
gi|408466397|gb|AFU71926.1| 50S ribosomal protein L13 [Bifidobacterium asteroides PRL2011]
Length = 149
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 7 VFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRNKL 63
V I + +L+ N V Y + G L+ + + ME +P I AV MLP+NKL
Sbjct: 54 VIVINASKMVLTGNKSDKVLYTHSGRPGGLRRDSYGQLMEHNPDRIIMTAVKGMLPKNKL 113
Query: 64 RDDRDRKLRIFPGSEHPF-GDRPLE 87
+ +LR+F G EHP +P+E
Sbjct: 114 AKVQLTRLRVFAGEEHPHTSQQPIE 138
>gi|424862845|ref|ZP_18286758.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86A]
gi|400757466|gb|EJP71677.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86A]
Length = 144
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LK +T KE ++++P I +AV MLP+NKL +KL++F G H
Sbjct: 80 YPGGLKTKTFKELVDKNPERIIEEAVKGMLPKNKLGKAIFKKLKVFSGPIH 130
>gi|383642495|ref|ZP_09954901.1| 50S ribosomal protein L13 [Sphingomonas elodea ATCC 31461]
Length = 159
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K T + +E R P + KAV RM+PR L + R LRIF GSEHP
Sbjct: 85 YAGGIKGVTAAKVLEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFAGSEHP 137
>gi|365827661|ref|ZP_09369509.1| 50S ribosomal protein L13 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|365264784|gb|EHM94573.1| 50S ribosomal protein L13 [Actinomyces sp. oral taxon 849 str.
F0330]
Length = 147
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + +YR+ GH L + ++ + P A+ KAV M+P
Sbjct: 53 YVVIINADKVALTNGKADKKFAYRHSGHPGGLTAVSYRDLLATRPERAVEKAVKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
KL + +KLR++ G+EHP +
Sbjct: 113 KLGRAQLKKLRVYAGAEHPHASQ 135
>gi|94266221|ref|ZP_01289929.1| Ribosomal protein L13 [delta proteobacterium MLMS-1]
gi|93453194|gb|EAT03655.1| Ribosomal protein L13 [delta proteobacterium MLMS-1]
Length = 144
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +++ T E ++ P + + +AV MLP+N L + +KL+++ G EHP
Sbjct: 80 YIGGIRQDTASELRDKKPEQLVYRAVKGMLPKNTLGRKQLKKLKVYAGGEHP 131
>gi|332286785|ref|YP_004418696.1| 50s ribosomal protein L13 [Pusillimonas sp. T7-7]
gi|330430738|gb|AEC22072.1| 50s ribosomal protein L13 [Pusillimonas sp. T7-7]
Length = 176
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y+V ++ + + YR + G + E ++ ER P AI+KAV MLP+
Sbjct: 87 YIVIINAADIVVTGNKSQDKKYYRHSGFPGGITETNFQKLQERFPGRAIQKAVKGMLPKG 146
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ G+EHP
Sbjct: 147 PLGYAMAKKLKVYAGAEHP 165
>gi|206603571|gb|EDZ40051.1| Ribosomal protein L13 [Leptospirillum sp. Group II '5-way CG']
Length = 151
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G KE K+ +ER P + +V MLP+NKL +LR+FPGSEH
Sbjct: 83 YPGGFKEERAKDVLERKPEIILTHSVKGMLPKNKLAKLYMTRLRVFPGSEH 133
>gi|162146355|ref|YP_001600814.1| 50S ribosomal protein L13 [Gluconacetobacter diazotrophicus PAl 5]
gi|209543642|ref|YP_002275871.1| 50S ribosomal protein L13 [Gluconacetobacter diazotrophicus PAl 5]
gi|161784930|emb|CAP54473.1| putative 50S ribosomal protein L13 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531319|gb|ACI51256.1| ribosomal protein L13 [Gluconacetobacter diazotrophicus PAl 5]
Length = 160
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
Y G +KERT+ +++E ++P + KAV RM+ R L+ + + L ++ G+EHP G +P
Sbjct: 81 YPGGIKERTITQRLEGKNPGHVVTKAVERMITRGPLQRAQMKHLYVYAGAEHPHAGQQP 139
>gi|261344886|ref|ZP_05972530.1| ribosomal protein L13 [Providencia rustigianii DSM 4541]
gi|282567025|gb|EFB72560.1| ribosomal protein L13 [Providencia rustigianii DSM 4541]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH +K+ T +E + R P + AV MLP+
Sbjct: 53 YIIVLNAEKIAVTGKKREDKIYYRHTGHVGGIKQATFEEMIARSPERVLEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|157372582|ref|YP_001480571.1| 50S ribosomal protein L13 [Serratia proteamaculans 568]
gi|166982783|sp|A8GK03.1|RL13_SERP5 RecName: Full=50S ribosomal protein L13
gi|157324346|gb|ABV43443.1| ribosomal protein L13 [Serratia proteamaculans 568]
Length = 142
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 15 FILSLNDEM----------SVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E V YR Y+G +K+ T +E + R+P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKRTDKVYYRHTGYVGGIKQATFEEMIARNPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMFRKLKVYAGTEH 130
>gi|298207402|ref|YP_003715581.1| 50S ribosomal protein L13 [Croceibacter atlanticus HTCC2559]
gi|83850038|gb|EAP87906.1| 50S ribosomal protein L13 [Croceibacter atlanticus HTCC2559]
Length = 151
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
Y G + T + E+DPT + AV MLP+NKL R +R+F G EH
Sbjct: 85 YPGGQRSLTATQLFEKDPTRLVENAVKGMLPKNKLGAALFRNMRVFVGGEHSL 137
>gi|408379461|ref|ZP_11177055.1| 50S ribosomal protein L13 [Agrobacterium albertimagni AOL15]
gi|407746945|gb|EKF58467.1| 50S ribosomal protein L13 [Agrobacterium albertimagni AOL15]
Length = 154
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++PG+ HP
Sbjct: 80 YPGGIKERTARQIIEGRFPERVLEKAVERMIPRGPLGRRQMKNLRVYPGTNHP 132
>gi|406706269|ref|YP_006756622.1| 50S ribosomal protein L13 [alpha proteobacterium HIMB5]
gi|406652045|gb|AFS47445.1| LSU ribosomal protein L13P [alpha proteobacterium HIMB5]
Length = 152
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 27 YRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YR+ GH +KE T ++ ++ P E ++ AV RMLP L + KL+I+ G++HP
Sbjct: 74 YRHTGHPGGIKETTPEKLQDKKPGETLKLAVKRMLPGGVLGKKQLTKLKIYAGNDHP 130
>gi|303233077|ref|ZP_07319752.1| ribosomal protein L13 [Atopobium vaginae PB189-T1-4]
gi|302480852|gb|EFL43937.1| ribosomal protein L13 [Atopobium vaginae PB189-T1-4]
Length = 146
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLNDEMSVSYRY------IGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N + L+ + S Y +G +K + +E M + P I A+ MLP+
Sbjct: 55 FVVVINAAKVKLSGSKAASKTYWRHTGFLGGIKFESFEEAMAKHPERVIEHAIKGMLPKG 114
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L + KL+++ GSEHP
Sbjct: 115 TLGRMQATKLKVYAGSEHP 133
>gi|54295548|ref|YP_127963.1| 50S ribosomal protein L13 [Legionella pneumophila str. Lens]
gi|161723241|ref|YP_096712.2| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|397665300|ref|YP_006506838.1| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila]
gi|397668383|ref|YP_006509920.1| 50S ribosomal protein L13 [Legionella pneumophila subsp.
pneumophila]
gi|81679132|sp|Q5WT90.1|RL13_LEGPL RecName: Full=50S ribosomal protein L13
gi|118573411|sp|Q5ZS12.2|RL13_LEGPH RecName: Full=50S ribosomal protein L13
gi|53755380|emb|CAH16876.1| 50S ribosomal subunit protein L13 [Legionella pneumophila str.
Lens]
gi|307611584|emb|CBX01266.1| 50S ribosomal subunit protein L13 [Legionella pneumophila 130b]
gi|395128711|emb|CCD06929.1| 50S ribosomal subunit protein L13 [Legionella pneumophila subsp.
pneumophila]
gi|395131794|emb|CCD10087.1| 50S ribosomal subunit protein L13 [Legionella pneumophila subsp.
pneumophila]
Length = 144
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G +K + ++ +++PT+ I AV MLP+N L + RKL+++ GSEHP
Sbjct: 82 GGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHP 131
>gi|54298698|ref|YP_125067.1| 50S ribosomal protein L13 [Legionella pneumophila str. Paris]
gi|148358556|ref|YP_001249763.1| 50S ribosomal protein L13 [Legionella pneumophila str. Corby]
gi|296108355|ref|YP_003620056.1| 50S ribosomal protein L13 [Legionella pneumophila 2300/99 Alcoy]
gi|81679386|sp|Q5X1I1.1|RL13_LEGPA RecName: Full=50S ribosomal protein L13
gi|166230994|sp|A5IAL7.1|RL13_LEGPC RecName: Full=50S ribosomal protein L13
gi|53752483|emb|CAH13915.1| 50S ribosomal subunit protein L13 [Legionella pneumophila str.
Paris]
gi|148280329|gb|ABQ54417.1| 50S ribosomal protein L13 [Legionella pneumophila str. Corby]
gi|295650257|gb|ADG26104.1| large subunit ribosomal protein L13 [Legionella pneumophila 2300/99
Alcoy]
Length = 144
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G +K + ++ +++PT+ I AV MLP+N L + RKL+++ GSEHP
Sbjct: 82 GGIKSASFEKLQDKNPTKIIELAVKGMLPKNPLGREMYRKLKVYAGSEHP 131
>gi|189500936|ref|YP_001960406.1| 50S ribosomal protein L13 [Chlorobium phaeobacteroides BS1]
gi|226702834|sp|B3EMI6.1|RL13_CHLPB RecName: Full=50S ribosomal protein L13
gi|189496377|gb|ACE04925.1| ribosomal protein L13 [Chlorobium phaeobacteroides BS1]
Length = 150
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K LK+ + + P + I KAV MLP N L +KL+++ G EHP
Sbjct: 86 YPGGVKIENLKDMLRKKPEKVIEKAVWGMLPHNNLGRALFKKLKVYAGPEHP 137
>gi|347530585|ref|YP_004837348.1| 50S ribosomal protein L13 [Roseburia hominis A2-183]
gi|345500733|gb|AEN95416.1| 50S ribosomal protein L13 [Roseburia hominis A2-183]
Length = 142
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE M + P I AV MLP+ L + KL ++ G +H
Sbjct: 80 YVGGMKETTLKEMMAKHPERVIEHAVKGMLPKGPLGREMYTKLFVYAGPDH 130
>gi|304310298|ref|YP_003809896.1| 50S ribosomal protein L13 [gamma proteobacterium HdN1]
gi|301796031|emb|CBL44235.1| ribosomal protein L13 [gamma proteobacterium HdN1]
Length = 143
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + + +++ P + I +AV MLP N L + RKL+++ GSEHP
Sbjct: 81 YPGGLKSISFDKLIQKKPEQVIERAVKGMLPHNVLGREMFRKLKVYAGSEHP 132
>gi|94270470|ref|ZP_01291751.1| Ribosomal protein L13 [delta proteobacterium MLMS-1]
gi|93450782|gb|EAT01832.1| Ribosomal protein L13 [delta proteobacterium MLMS-1]
Length = 113
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +++ T E ++ P + + +AV MLP+N L + +KL+++ G EHP
Sbjct: 49 YIGGIRQDTASELRDKKPEQLVYRAVKGMLPKNTLGRKQLKKLKVYAGGEHP 100
>gi|198284761|ref|YP_002221082.1| 50S ribosomal protein L13 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665700|ref|YP_002427442.1| 50S ribosomal protein L13 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415995900|ref|ZP_11560398.1| 50S ribosomal protein L13 [Acidithiobacillus sp. GGI-221]
gi|226702809|sp|B7JAI4.1|RL13_ACIF2 RecName: Full=50S ribosomal protein L13
gi|226702810|sp|B5EQH8.1|RL13_ACIF5 RecName: Full=50S ribosomal protein L13
gi|198249282|gb|ACH84875.1| ribosomal protein L13 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517913|gb|ACK78499.1| ribosomal protein L13 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339835645|gb|EGQ63299.1| 50S ribosomal protein L13 [Acidithiobacillus sp. GGI-221]
Length = 142
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G+LK + ++ E P I AV MLP+N L +KL+++ GSEHP + +P
Sbjct: 80 YVGNLKSASFEKMKETHPERIIELAVKGMLPKNPLGRAMFKKLKVYTGSEHPHSAQQPQP 139
>gi|212711099|ref|ZP_03319227.1| hypothetical protein PROVALCAL_02168 [Providencia alcalifaciens DSM
30120]
gi|422019894|ref|ZP_16366436.1| 50S ribosomal protein L13 [Providencia alcalifaciens Dmel2]
gi|212686267|gb|EEB45795.1| hypothetical protein PROVALCAL_02168 [Providencia alcalifaciens DSM
30120]
gi|414102518|gb|EKT64110.1| 50S ribosomal protein L13 [Providencia alcalifaciens Dmel2]
Length = 142
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH+ K+ T +E + R P + AV MLP+
Sbjct: 53 YIIVLNAEKIAVTGKKREDKIYYRHTGHIGGIKQATFEEMIARSPERVLEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|422338437|ref|ZP_16419397.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355372353|gb|EHG19694.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 144
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKIVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL ++ +LR+F G+EH
Sbjct: 115 KLGREQLTRLRVFAGAEH 132
>gi|331091723|ref|ZP_08340557.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403480|gb|EGG83039.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 142
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E M + P + + AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLREMMAKKPEKVVELAVKGMLPKGPLGRAMIKKLHVYAGPEH 130
>gi|297172666|gb|ADI23634.1| hypothetical protein [uncultured gamma proteobacterium
HF4000_06A21]
Length = 142
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G +KE T ++Q+ D + I +AV MLPRN L KLR++PG +H
Sbjct: 80 YPGGIKEITFEKQLAADSRKIIERAVKGMLPRNSLGRSMLSKLRVYPGPDH 130
>gi|315925221|ref|ZP_07921435.1| 50S ribosomal protein L13 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621455|gb|EFV01422.1| 50S ribosomal protein L13 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 145
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 29 YIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y GH LKE + M+ P A+ KAV M+P NKL KLR++ G++HP
Sbjct: 80 YSGHPGGLKETVYRRFMQEKPELAVYKAVKGMIPHNKLGAQVMTKLRVYAGADHP 134
>gi|269955469|ref|YP_003325258.1| 50S ribosomal protein L13 [Xylanimonas cellulosilytica DSM 15894]
gi|269304150|gb|ACZ29700.1| ribosomal protein L13 [Xylanimonas cellulosilytica DSM 15894]
Length = 149
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLNDE---MSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L+ ++YR Y G L+ E +E++P A+ KAV M+P+
Sbjct: 53 FVIVINADKVALSGNKRATKLAYRHSGYPGGLRSVAYGELLEKNPERAVEKAVRGMIPKT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G EHP + +P+
Sbjct: 113 SLGRQQLGKLKVYRGGEHPHAAQQPQPF 140
>gi|305665266|ref|YP_003861553.1| 50S ribosomal protein L13 [Maribacter sp. HTCC2170]
gi|88710020|gb|EAR02252.1| 50S ribosomal protein L13 [Maribacter sp. HTCC2170]
Length = 161
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 15 FILSLNDEMSVSY-RYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRK 70
LS N S SY RY G+ + T+K+ ++++P + KAV MLP+N+L D R
Sbjct: 77 ITLSGNKWDSKSYSRYTGYPGGQRTTTVKQMLDKNPGRIVEKAVKGMLPKNRLGADLFRN 136
Query: 71 LRIFPGSEH 79
L+++ G +H
Sbjct: 137 LKVYVGPDH 145
>gi|398385845|ref|ZP_10543861.1| ribosomal protein L13, bacterial type [Sphingobium sp. AP49]
gi|397719661|gb|EJK80227.1| ribosomal protein L13, bacterial type [Sphingobium sp. AP49]
Length = 159
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE T ++ +E R P + KAV RM+PR L + R LR+F G+EHP
Sbjct: 85 YAGGIKETTPQKILEGRFPERVLEKAVERMIPRGPLGRQQMRNLRVFAGTEHP 137
>gi|456013301|gb|EMF46960.1| LSU ribosomal protein L13p (L13Ae) [Planococcus halocryophilus Or1]
Length = 145
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
+Y G LK+RT E + PT+ + A+ MLP+N L +KL ++ GSEH
Sbjct: 80 QYTGGLKQRTALEMRTKYPTKMLELAIKGMLPKNSLGRQTFKKLHVYAGSEH 131
>gi|350572293|ref|ZP_08940597.1| 50S ribosomal protein L13 [Neisseria wadsworthii 9715]
gi|349790416|gb|EGZ44327.1| 50S ribosomal protein L13 [Neisseria wadsworthii 9715]
Length = 142
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ L + E YR+ G + ERT +E E+ P A+ KAV MLP+
Sbjct: 53 YIIVINADKLRVTGTKHEDKKYYRHSGFPGGIYERTFREMQEQFPGRALEKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L +KL+++ GSEH
Sbjct: 113 PLGYAMIKKLKVYAGSEH 130
>gi|317484611|ref|ZP_07943515.1| ribosomal protein L13 [Bilophila wadsworthia 3_1_6]
gi|345888491|ref|ZP_08839574.1| 50S ribosomal protein L13 [Bilophila sp. 4_1_30]
gi|316924151|gb|EFV45333.1| ribosomal protein L13 [Bilophila wadsworthia 3_1_6]
gi|345040660|gb|EGW44897.1| 50S ribosomal protein L13 [Bilophila sp. 4_1_30]
Length = 144
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF---GDRP 85
Y+G L+E TL + + P + + AV MLP+N+L +KL+++ G HP G +P
Sbjct: 80 YVGGLREITLDKLLAEKPADVLMHAVRGMLPKNRLGRAMLKKLKVYAGPTHPHTAQGPKP 139
Query: 86 LE-PY 89
L PY
Sbjct: 140 LSFPY 144
>gi|295698264|ref|YP_003602919.1| 50S ribosomal protein L13 [Candidatus Riesia pediculicola USDA]
gi|291156964|gb|ADD79409.1| ribosomal protein L13 [Candidatus Riesia pediculicola USDA]
Length = 134
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIG +KE T ++ ++R P I+ AV MLP+NKL +++++ GS H
Sbjct: 71 YIGGIKEITFRDLIDRYPERVIKHAVKGMLPKNKLGKRMYLRMKVYSGSNH 121
>gi|240276721|gb|EER40232.1| 50S ribosomal protein L13 [Ajellomyces capsulatus H143]
Length = 89
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 48 EAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLE---PYVMPPRRVRELRPRVR 104
E +RKAV MLP+N+LRD R +L++F G HP+ L+ V+ P P ++
Sbjct: 12 EVLRKAVSGMLPKNRLRDKRLARLKVFEGHAHPYKKNILKLAGKSVLGPTNSIADSPLIK 71
Query: 105 RAMIREQ 111
A +E+
Sbjct: 72 EAFAKEK 78
>gi|334343738|ref|YP_004552290.1| 50S ribosomal protein L13 [Sphingobium chlorophenolicum L-1]
gi|334100360|gb|AEG47784.1| ribosomal protein L13 [Sphingobium chlorophenolicum L-1]
Length = 159
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE T + +E R P + KAV RM+PR L + R LRIF G+EHP
Sbjct: 85 YAGGIKETTPAKILEGRFPERVLEKAVERMIPRGPLGRQQMRNLRIFGGAEHP 137
>gi|134298134|ref|YP_001111630.1| 50S ribosomal protein L13 [Desulfotomaculum reducens MI-1]
gi|189041002|sp|A4J152.1|RL13_DESRM RecName: Full=50S ribosomal protein L13
gi|134050834|gb|ABO48805.1| LSU ribosomal protein L13P [Desulfotomaculum reducens MI-1]
Length = 143
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKE + + ME+ P + KA+ MLP N+L + +KL+++ GSEH
Sbjct: 81 YPGGLKEFSYRTMMEKRPELIVEKAIKGMLPHNRLGAQQFKKLKVYVGSEH 131
>gi|383310159|ref|YP_005362969.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871431|gb|AFF23798.1| 50S ribosomal protein L13 [Pasteurella multocida subsp. multocida
str. HN06]
Length = 142
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L KL+++ GSEH
Sbjct: 80 YVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMYHKLKVYAGSEH 130
>gi|344997076|ref|YP_004799419.1| 50S ribosomal protein L13 [Caldicellulosiruptor lactoaceticus 6A]
gi|343965295|gb|AEM74442.1| ribosomal protein L13 [Caldicellulosiruptor lactoaceticus 6A]
Length = 142
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 21 DEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
D RY G LK + +E+ P +AI AV MLP+N+LRD RKL+++ G HP
Sbjct: 72 DGYRYHTRYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNRLRDRFMRKLKVYRGPNHP 131
>gi|156093731|ref|XP_001612904.1| 50S ribosomal protein L13 [Plasmodium vivax Sal-1]
gi|148801778|gb|EDL43177.1| 50S ribosomal protein L13, putative [Plasmodium vivax]
Length = 212
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 37 TLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
T K R+P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 140 TCKTVFARNPSMVLNLAVKRMLPNNRLRQLYYRKLFVYPGAIHPHWGIP 188
>gi|320589573|gb|EFX02029.1| 50S ribosomal protein l13 [Grosmannia clavigera kw1407]
Length = 183
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G L+ T+ M++ E +RKAV MLP+N+LRD R +L+ F G HP+
Sbjct: 100 GSLRSVTMDVLMDKFGGAEVLRKAVSGMLPKNRLRDKRLTRLKAFEGDAHPY 151
>gi|325068066|ref|ZP_08126739.1| 50S ribosomal protein L13 [Actinomyces oris K20]
gi|326774001|ref|ZP_08233283.1| ribosomal protein L13 [Actinomyces viscosus C505]
gi|343521848|ref|ZP_08758814.1| ribosomal protein L13 [Actinomyces sp. oral taxon 175 str. F0384]
gi|326636140|gb|EGE37044.1| ribosomal protein L13 [Actinomyces viscosus C505]
gi|343401257|gb|EGV13763.1| ribosomal protein L13 [Actinomyces sp. oral taxon 175 str. F0384]
Length = 147
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + + +YR+ GH L + +E + P A+ KA+ M+P
Sbjct: 53 YVVIINADKVALTNGKADKKFAYRHSGHPGGLTAVSYRELLATRPERAVEKAIKGMVPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDR 84
KL + +KL+++ G+EHP +
Sbjct: 113 KLGRAQLKKLKVYAGAEHPHASQ 135
>gi|85858180|ref|YP_460382.1| 50S ribosomal protein L13 [Syntrophus aciditrophicus SB]
gi|118573455|sp|Q2LPM2.1|RL13_SYNAS RecName: Full=50S ribosomal protein L13
gi|85721271|gb|ABC76214.1| LSU ribosomal protein L13P [Syntrophus aciditrophicus SB]
Length = 142
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G LKE+T + M+ PT+ + AV MLP+N L RKL+++ G++H
Sbjct: 80 YPGGLKEKTAGKMMQEKPTDVLWLAVKGMLPKNSLGRRMLRKLKVYAGNDH 130
>gi|166033533|ref|ZP_02236362.1| hypothetical protein DORFOR_03259 [Dorea formicigenerans ATCC
27755]
gi|346309059|ref|ZP_08851162.1| 50S ribosomal protein L13 [Dorea formicigenerans 4_6_53AFAA]
gi|166026718|gb|EDR45475.1| ribosomal protein L13 [Dorea formicigenerans ATCC 27755]
gi|345901303|gb|EGX71106.1| 50S ribosomal protein L13 [Dorea formicigenerans 4_6_53AFAA]
Length = 142
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL E M + P + I AV MLP+ L +KL ++ G +H
Sbjct: 80 YVGGMKETTLAEMMAKKPEKVIELAVKGMLPKGPLGRSMIKKLHVYAGPDH 130
>gi|373470346|ref|ZP_09561482.1| ribosomal protein L13 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371762805|gb|EHO51326.1| ribosomal protein L13 [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 144
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G ++E TL+E + + P + A+ MLP+ L D RKL ++ G H G + +P
Sbjct: 80 YVGGMRETTLRELLAKKPERVVELAIKGMLPKGPLGRDMYRKLHVYAGENH--GHQAQKP 137
Query: 89 YVM 91
VM
Sbjct: 138 VVM 140
>gi|88802062|ref|ZP_01117590.1| 50S ribosomal protein L13 [Polaribacter irgensii 23-P]
gi|88782720|gb|EAR13897.1| 50S ribosomal protein L13 [Polaribacter irgensii 23-P]
Length = 159
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 15 FILSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRK 70
+LS N SY Y G + T E E+DPT + KAV MLP+N L R
Sbjct: 75 IVLSGNKWKEKSYIRHTGYPGGQRSLTATEMFEKDPTRLVEKAVKGMLPKNILGAALFRN 134
Query: 71 LRIFPGSEH 79
L ++ G+EH
Sbjct: 135 LYVYAGTEH 143
>gi|291562305|emb|CBL41121.1| LSU ribosomal protein L13P [butyrate-producing bacterium SS3/4]
Length = 144
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E +E+ P + I AV MLP+ L KL ++ G +H
Sbjct: 80 YVGGMKETTLREMLEKKPEKVIELAVKGMLPKGPLGRSMITKLHVYAGPDH 130
>gi|260438182|ref|ZP_05791998.1| ribosomal protein L13 [Butyrivibrio crossotus DSM 2876]
gi|292809372|gb|EFF68577.1| ribosomal protein L13 [Butyrivibrio crossotus DSM 2876]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + V YR Y+G LKE TL+E + + P I AV MLP+
Sbjct: 53 YVIVVNAEKVKVTGKKLDQKVYYRHSEYVGSLKETTLREMLNKHPERVIESAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L + KL ++ G +H
Sbjct: 113 PLGREMYTKLHVYAGPDH 130
>gi|347530238|ref|YP_004836986.1| 50S ribosomal protein L13 [Sphingobium sp. SYK-6]
gi|345138920|dbj|BAK68529.1| 50S ribosomal protein L13 [Sphingobium sp. SYK-6]
Length = 159
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KE + ++ +E R P + KAV RM+PR L + R LR+F GSEHP
Sbjct: 85 YAGGIKETSPQKVLEGRFPERVLEKAVERMIPRGPLGRQQMRNLRVFAGSEHP 137
>gi|268590730|ref|ZP_06124951.1| ribosomal protein L13 [Providencia rettgeri DSM 1131]
gi|422007609|ref|ZP_16354595.1| 50S ribosomal protein L13 [Providencia rettgeri Dmel1]
gi|291313501|gb|EFE53954.1| ribosomal protein L13 [Providencia rettgeri DSM 1131]
gi|414097499|gb|EKT59154.1| 50S ribosomal protein L13 [Providencia rettgeri Dmel1]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR+ GH +K+ T +E + R P + AV MLP+
Sbjct: 53 YIIVLNAEKIAVTGNKREDKIYYRHTGHVGGIKQATFEEMIARSPERVLEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|219870431|ref|YP_002474806.1| 50S ribosomal protein L13 [Haemophilus parasuis SH0165]
gi|254798500|sp|B8F3F6.1|RL13_HAEPS RecName: Full=50S ribosomal protein L13
gi|219690635|gb|ACL31858.1| 50S ribosomal protein L13 [Haemophilus parasuis SH0165]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEH 130
>gi|194334611|ref|YP_002016471.1| 50S ribosomal protein L13 [Prosthecochloris aestuarii DSM 271]
gi|226702892|sp|B4S432.1|RL13_PROA2 RecName: Full=50S ribosomal protein L13
gi|194312429|gb|ACF46824.1| ribosomal protein L13 [Prosthecochloris aestuarii DSM 271]
Length = 149
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++ +K+ +++ P + I KAV MLP N L +KL+++ G+EHP
Sbjct: 85 NYPGGVRIDNVKDVLQKKPEQVIEKAVWGMLPHNNLGRQLFKKLKVYKGTEHP 137
>gi|407003079|gb|EKE19706.1| Ribosomal protein L13 [uncultured bacterium]
Length = 130
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G + +LK+ + +D + I+ AV MLP+NKLRD +L +F +EH
Sbjct: 71 YPGGISSISLKDLLAKDSGKVIQNAVYGMLPKNKLRDKMMLRLSVFADAEHT 122
>gi|152979158|ref|YP_001344787.1| 50S ribosomal protein L13 [Actinobacillus succinogenes 130Z]
gi|171704323|sp|A6VPF5.1|RL13_ACTSZ RecName: Full=50S ribosomal protein L13
gi|150840881|gb|ABR74852.1| ribosomal protein L13 [Actinobacillus succinogenes 130Z]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVSYR------------YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ +N D+++V+ R Y+G +K+ T KE + R P I AV MLP+
Sbjct: 53 YIIVINADKVAVTGRKETDKVYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G++H
Sbjct: 113 PLGRAMFRKLKVYAGAQH 130
>gi|333929278|ref|YP_004502857.1| 50S ribosomal protein L13 [Serratia sp. AS12]
gi|333934231|ref|YP_004507809.1| 50S ribosomal protein L13 [Serratia plymuthica AS9]
gi|386331101|ref|YP_006027271.1| 50S ribosomal protein L13 [Serratia sp. AS13]
gi|386822742|ref|ZP_10109940.1| 50S ribosomal protein L13 [Serratia plymuthica PRI-2C]
gi|333475838|gb|AEF47548.1| ribosomal protein L13 [Serratia plymuthica AS9]
gi|333493338|gb|AEF52500.1| ribosomal protein L13 [Serratia sp. AS12]
gi|333963434|gb|AEG30207.1| ribosomal protein L13 [Serratia sp. AS13]
gi|386380318|gb|EIJ21057.1| 50S ribosomal protein L13 [Serratia plymuthica PRI-2C]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 15 FILSLNDEM----------SVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E V YR+ GH+ K+ T +E + R+P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGKKRTDKVYYRHTGHIGGIKQATFEEMIARNPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMFRKLKVYAGNEH 130
>gi|270263229|ref|ZP_06191499.1| 50S ribosomal protein L13 [Serratia odorifera 4Rx13]
gi|421785711|ref|ZP_16222136.1| ribosomal protein L13 [Serratia plymuthica A30]
gi|270042917|gb|EFA16011.1| 50S ribosomal protein L13 [Serratia odorifera 4Rx13]
gi|407752326|gb|EKF62484.1| ribosomal protein L13 [Serratia plymuthica A30]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 VSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
V YR+ GH+ K+ T +E + R+P I AV MLP+ L RKL+++ G+EH
Sbjct: 73 VYYRHTGHIGGIKQATFEEMIARNPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEH 130
>gi|334338941|ref|YP_004543921.1| 50S ribosomal protein L13 [Desulfotomaculum ruminis DSM 2154]
gi|334090295|gb|AEG58635.1| ribosomal protein L13 [Desulfotomaculum ruminis DSM 2154]
Length = 143
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK+ + ++ M++ P + KAV MLP N+L + KL+++ G EHP
Sbjct: 81 YPGGLKQTSYRKMMDKRPELIVEKAVKGMLPHNRLGTQQATKLKVYQGVEHP 132
>gi|148244978|ref|YP_001219672.1| 50S ribosomal protein L13 [Candidatus Vesicomyosocius okutanii HA]
gi|166199629|sp|A5CVT9.1|RL13_VESOH RecName: Full=50S ribosomal protein L13
gi|146326805|dbj|BAF61948.1| 50S ribosomal protein L13 [Candidatus Vesicomyosocius okutanii HA]
Length = 142
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
Y+G+LK K+ ++P I KAV MLP+ L D +K+++F SEH G
Sbjct: 80 YVGNLKSIAFKDLQTKNPETIINKAVKGMLPKGPLGRDMFKKMKVFVDSEHTHG 133
>gi|331003342|ref|ZP_08326845.1| 50S ribosomal protein L13 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412612|gb|EGG91997.1| 50S ribosomal protein L13 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 144
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G ++E TL+E + + P + A+ MLP+ L D RKL ++ G H G + +P
Sbjct: 80 YVGGMRETTLRELLAKKPERVVELAIKGMLPKGPLGRDMYRKLHVYAGETH--GHQAQKP 137
Query: 89 YVM 91
VM
Sbjct: 138 VVM 140
>gi|222100013|ref|YP_002534581.1| 50S ribosomal protein L13 [Thermotoga neapolitana DSM 4359]
gi|221572403|gb|ACM23215.1| 50S ribosomal protein L13 [Thermotoga neapolitana DSM 4359]
Length = 138
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK T ++ +++ P I AV RMLP+NK+ R+L+++ SEHP + EP
Sbjct: 76 YPGGLKSMTARQMLQKHPERLIWLAVKRMLPKNKMGRRMLRRLKVYASSEHPHQAQKPEP 135
>gi|414159382|ref|ZP_11415668.1| 50S ribosomal protein L13 [Staphylococcus simulans ACS-120-V-Sch1]
gi|410884384|gb|EKS32210.1| 50S ribosomal protein L13 [Staphylococcus simulans ACS-120-V-Sch1]
Length = 145
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + V YR Y G +K T E E++P + ++ MLP N
Sbjct: 54 YVIIINAGQIEMTGKKESDKVYYRHSNYPGGIKSITAGELKEKNPARLLEISIKGMLPSN 113
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
+L + + +KL ++ G+EHP + E Y
Sbjct: 114 RLGEKQGKKLFVYGGAEHPHAAQQPENY 141
>gi|350563293|ref|ZP_08932115.1| ribosomal protein L13 [Thioalkalimicrobium aerophilum AL3]
gi|349779157|gb|EGZ33504.1| ribosomal protein L13 [Thioalkalimicrobium aerophilum AL3]
Length = 142
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G+LK + ++ ++ P + A+ MLPR L D RKL+++ G+EHP
Sbjct: 80 YVGNLKSMSFEKMIDSRPERVLELAIKGMLPRGPLGRDMYRKLKVYAGTEHP 131
>gi|71893999|ref|YP_279445.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae J]
gi|72080978|ref|YP_288036.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae 7448]
gi|385334810|ref|YP_005888757.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae 168]
gi|123644622|sp|Q4A776.1|RL13_MYCH7 RecName: Full=50S ribosomal protein L13
gi|123645397|sp|Q4A937.1|RL13_MYCHJ RecName: Full=50S ribosomal protein L13
gi|71852126|gb|AAZ44734.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae J]
gi|71914102|gb|AAZ54013.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae 7448]
gi|312601594|gb|ADQ90849.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae 168]
Length = 144
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP-FGDRP 85
Y G L+ RT +E + P + +A+ M+P KL D + + L ++ GSEHP G P
Sbjct: 81 YPGGLRVRTAREMRAKKPIALLERAIYGMIPHTKLGDKQRKNLYVYSGSEHPHLGQNP 138
>gi|289449919|ref|YP_003475308.1| 50S ribosomal protein L13 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184466|gb|ADC90891.1| ribosomal protein L13 [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 144
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 27 YRYI----GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YRY G LKE E M + PT+A+ AV MLP+N L +KL ++ G+EH
Sbjct: 74 YRYHTGFPGGLKEVQYSELMAKKPTKALELAVKGMLPKNSLGRQMFKKLHLYAGAEH 130
>gi|156086164|ref|XP_001610491.1| 50S ribosomal protein L13 [Babesia bovis T2Bo]
gi|154797744|gb|EDO06923.1| 50S ribosomal protein L13, putative [Babesia bovis]
Length = 143
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 37 TLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
T K M R+P I AV RMLPRNKLR R+L ++ G+ HP + P
Sbjct: 26 TAKTMMGRNPAMIINLAVKRMLPRNKLRPFWYRRLFVYGGALHPHWNIP 74
>gi|385679403|ref|ZP_10053331.1| 50S ribosomal protein L13 [Amycolatopsis sp. ATCC 39116]
Length = 150
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L++R+ E ++ P + K V MLP+NKL + +KL+++ G +HP + +P
Sbjct: 80 YPGGLRKRSFGELLDTRPDRLLEKVVKGMLPKNKLGRAQAKKLKVYAGPQHPHAAQQPQP 139
Query: 89 Y 89
+
Sbjct: 140 F 140
>gi|417002663|ref|ZP_11941983.1| ribosomal protein L13 [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479089|gb|EGC82189.1| ribosomal protein L13 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 146
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 7 VFFILRNLFILSLNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNK 62
V I + +L+ N E Y+ Y G LK K+ ++ P + AV MLP NK
Sbjct: 57 VIIINADKVVLTGNKEDQKEYQRYSGYSGGLKITKFKDMKDKHPERIVTHAVEGMLPHNK 116
Query: 63 LRDDRDRKLRIFPGSEH 79
L +KLR++ GSEH
Sbjct: 117 LGRAMAKKLRVYAGSEH 133
>gi|167759103|ref|ZP_02431230.1| hypothetical protein CLOSCI_01450 [Clostridium scindens ATCC 35704]
gi|336422072|ref|ZP_08602226.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 5_1_57FAA]
gi|167663221|gb|EDS07351.1| ribosomal protein L13 [Clostridium scindens ATCC 35704]
gi|336009362|gb|EGN39356.1| 50S ribosomal protein L13 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 142
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TL E M++ P + I AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMRETTLSEMMDKKPEKVIELAVKGMLPKGPLGRAMIKKLHVYAGPEH 130
>gi|402825137|ref|ZP_10874451.1| 50S ribosomal protein L13 [Sphingomonas sp. LH128]
gi|402261328|gb|EJU11377.1| 50S ribosomal protein L13 [Sphingomonas sp. LH128]
Length = 159
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
Y G +KE T + + R P + KAV RM+PR L D+ R L ++ G+EHP G
Sbjct: 85 YAGGIKEVTADKVLAGRFPERVLEKAVERMIPRGPLGRDQMRALHVYAGTEHPHGG 140
>gi|34765016|ref|ZP_00145324.1| LSU ribosomal protein L13P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|421146002|ref|ZP_15605805.1| 50S ribosomal protein L13 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|27885645|gb|EAA23077.1| LSU ribosomal protein L13P [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|395487598|gb|EJG08550.1| 50S ribosomal protein L13 [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 106
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV L + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 17 YVVVTNASKLVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 76
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 77 KLGRQQLTRLRVFAGAEH 94
>gi|377568232|ref|ZP_09797427.1| 50S ribosomal protein L13 [Gordonia terrae NBRC 100016]
gi|377534559|dbj|GAB42592.1| 50S ribosomal protein L13 [Gordonia terrae NBRC 100016]
Length = 147
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + S + ++Y + GH LK RT E + P I KAV MLP
Sbjct: 53 FVVIINAEKIALTSNKADRKLNYTHSGHPGGLKSRTTTELLATYPERVIEKAVKGMLPST 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
KL KL+++ G HP
Sbjct: 113 KLGRAMASKLKVYAGPNHP 131
>gi|358065617|ref|ZP_09152153.1| 50S ribosomal protein L13 [Clostridium hathewayi WAL-18680]
gi|356696103|gb|EHI57726.1| 50S ribosomal protein L13 [Clostridium hathewayi WAL-18680]
Length = 144
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TL+E M++ P + I AV MLP+ L KL ++ G +H
Sbjct: 80 YVGGMKETTLREMMDKKPEKVIELAVKGMLPKGPLGRSMMTKLHVYAGPDH 130
>gi|455651230|gb|EMF29976.1| 50S ribosomal protein L13 [Streptomyces gancidicus BKS 13-15]
Length = 147
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G L+ E + ++P +AI KAV MLP+N L KL+++ G +HP G + P
Sbjct: 80 YPGGLRSVRYDELLAKNPEKAIEKAVKGMLPKNTLGRQMLSKLKVYSGDQHPHGAQQPVP 139
Query: 89 Y 89
+
Sbjct: 140 F 140
>gi|54020651|ref|YP_116180.1| 50S ribosomal protein L13 [Mycoplasma hyopneumoniae 232]
gi|81680584|sp|Q5ZZN5.1|RL13_MYCH2 RecName: Full=50S ribosomal protein L13
gi|53987824|gb|AAV28025.1| 50s ribosomal protein L13 [Mycoplasma hyopneumoniae 232]
Length = 144
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP-FGDRP 85
Y G L+ RT +E + P + +A+ M+P KL D + + L ++ GSEHP G P
Sbjct: 81 YPGGLRVRTAREMRAKKPIALLERAIYGMIPHTKLGDKQRKNLYVYSGSEHPHLGQNP 138
>gi|440226196|ref|YP_007333287.1| 50S ribosomal protein L13 [Rhizobium tropici CIAT 899]
gi|440037707|gb|AGB70741.1| 50S ribosomal protein L13 [Rhizobium tropici CIAT 899]
Length = 154
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YAGGIKERTARQIIEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|436841491|ref|YP_007325869.1| ribosomal protein L13 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432170397|emb|CCO23768.1| ribosomal protein L13 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 140
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G +K RTLK ME+ P + AV MLP++ L +KL+++ G++HP
Sbjct: 82 GGIKSRTLKVMMEKKPEVVLETAVRGMLPKSSLGRKMIKKLKVYAGTDHP 131
>gi|189204352|ref|XP_001938511.1| mitochondrial 54S ribosomal protein YmL23 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985610|gb|EDU51098.1| 50S ribosomal protein L13 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 171
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LKE ++ M + E +RKAV MLP+N+LR +R +L+ F G HP+
Sbjct: 82 GSLKELSMDRMMAKWGGGEVLRKAVSGMLPKNRLRKERLARLKTFEGQAHPY 133
>gi|218506360|ref|ZP_03504238.1| 50S ribosomal protein L13 [Rhizobium etli Brasil 5]
Length = 82
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 25 VSYRYIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+++ Y G +KERT ++ +E R P + KAV RM+PR L + + +R++ GS HP
Sbjct: 4 LAHGYAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNMRVYAGSNHP 60
>gi|238793693|ref|ZP_04637315.1| 50S ribosomal protein L13 [Yersinia intermedia ATCC 29909]
gi|238726934|gb|EEQ18466.1| 50S ribosomal protein L13 [Yersinia intermedia ATCC 29909]
Length = 142
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 15 FILSLNDEM----------SVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E + YR+ GH+ K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKRTDKIYYRHTGHIGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGTEH 130
>gi|410421807|ref|YP_006902256.1| 50s ribosomal protein L13 [Bordetella bronchiseptica MO149]
gi|410474426|ref|YP_006897707.1| 50S ribosomal protein L13 [Bordetella parapertussis Bpp5]
gi|412341346|ref|YP_006970101.1| 50s ribosomal protein L13 [Bordetella bronchiseptica 253]
gi|427816341|ref|ZP_18983405.1| 50s ribosomal protein L13 [Bordetella bronchiseptica 1289]
gi|427819846|ref|ZP_18986909.1| 50s ribosomal protein L13 [Bordetella bronchiseptica D445]
gi|427825156|ref|ZP_18992218.1| 50s ribosomal protein L13 [Bordetella bronchiseptica Bbr77]
gi|33574522|emb|CAE39167.1| 50s ribosomal protein L13 [Bordetella parapertussis]
gi|33577455|emb|CAE34720.1| 50s ribosomal protein L13 [Bordetella bronchiseptica RB50]
gi|408444536|emb|CCJ51291.1| 50s ribosomal protein L13 [Bordetella parapertussis Bpp5]
gi|408449102|emb|CCJ60789.1| 50s ribosomal protein L13 [Bordetella bronchiseptica MO149]
gi|408771180|emb|CCJ55979.1| 50s ribosomal protein L13 [Bordetella bronchiseptica 253]
gi|410567341|emb|CCN24912.1| 50s ribosomal protein L13 [Bordetella bronchiseptica 1289]
gi|410570846|emb|CCN19046.1| 50s ribosomal protein L13 [Bordetella bronchiseptica D445]
gi|410590421|emb|CCN05508.1| 50s ribosomal protein L13 [Bordetella bronchiseptica Bbr77]
Length = 155
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++E ++ +R P AI+KAV MLP+ L +KL+++ G+EHP
Sbjct: 93 YPGGIRETNFEKMQQRFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHP 144
>gi|393758880|ref|ZP_10347699.1| 50S ribosomal protein L13 [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|424778313|ref|ZP_18205263.1| 50S ribosomal protein L13 [Alcaligenes sp. HPC1271]
gi|393162776|gb|EJC62831.1| 50S ribosomal protein L13 [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|422886852|gb|EKU29264.1| 50S ribosomal protein L13 [Alcaligenes sp. HPC1271]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G + E + ER P AI KAV MLP+ L +KL+++ G+EHP
Sbjct: 80 YPGGIYETNFQTMQERFPGRAIEKAVKGMLPKGPLGYAMAKKLKVYAGAEHP 131
>gi|325265208|ref|ZP_08131934.1| ribosomal protein L13 [Clostridium sp. D5]
gi|324029612|gb|EGB90901.1| ribosomal protein L13 [Clostridium sp. D5]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TL E M++ P + I AV MLP+ L + KL ++ G EH
Sbjct: 80 YVGGMRETTLAELMDKKPEQVIELAVKGMLPKGPLGREMMNKLHVYAGPEH 130
>gi|238785109|ref|ZP_04629104.1| 50S ribosomal protein L13 [Yersinia bercovieri ATCC 43970]
gi|238796200|ref|ZP_04639710.1| 50S ribosomal protein L13 [Yersinia mollaretii ATCC 43969]
gi|238714001|gb|EEQ06018.1| 50S ribosomal protein L13 [Yersinia bercovieri ATCC 43970]
gi|238719893|gb|EEQ11699.1| 50S ribosomal protein L13 [Yersinia mollaretii ATCC 43969]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLNDE-MSVS---------YRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E ++V+ YR+ GH+ K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKIAVTGNKRTDKIYYRHTGHIGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGTEH 130
>gi|58001341|gb|AAW60235.1| LSU ribosomal protein L13P [Gluconobacter oxydans 621H]
Length = 202
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 31 GHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
G +KERT+ +++ ++P E + KAV RM+ R L+ + + L ++ GSEHP G +P++
Sbjct: 128 GGIKERTITQRLTGKNPGEVVEKAVERMITRGPLQRAQMKHLYVYAGSEHPHDGQKPVK 186
>gi|389877648|ref|YP_006371213.1| 50S ribosomal protein L13 [Tistrella mobilis KA081020-065]
gi|388528432|gb|AFK53629.1| Ribosomal protein L13 [Tistrella mobilis KA081020-065]
Length = 152
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 27 YRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
Y + GH +KERT + ++ R P I AV RM+PR L D RKL ++ G EHP
Sbjct: 75 YWHTGHPGGIKERTADKILDGRYPERVIEAAVRRMVPRGPLGRDVMRKLHVYAGPEHPHA 134
Query: 83 DRPLEP 88
+ EP
Sbjct: 135 AQTPEP 140
>gi|407785703|ref|ZP_11132850.1| 50S ribosomal protein L13 [Celeribacter baekdonensis B30]
gi|407202653|gb|EKE72643.1| 50S ribosomal protein L13 [Celeribacter baekdonensis B30]
Length = 154
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 27 YRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y + GH +K RT+ + +E + P + KAV RMLP KL + LR++ G+EHP
Sbjct: 75 YWHTGHPGGIKSRTIGQILEGKFPERVVTKAVQRMLPGGKLSRQQMTNLRVYAGAEHP 132
>gi|365170852|ref|ZP_09361135.1| ribosomal protein L13 [Synergistes sp. 3_1_syn1]
gi|363617917|gb|EHL69284.1| ribosomal protein L13 [Synergistes sp. 3_1_syn1]
Length = 144
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK T K+ +ER P + + + MLP+ KL D RKL+++ G HP
Sbjct: 83 YPGGLKVLTYKQILERRPERLVERVIWGMLPKTKLGRDMYRKLKVYAGPAHP 134
>gi|167854975|ref|ZP_02477750.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755]
gi|167853932|gb|EDS25171.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T KE + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKDATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMLRKLKVYAGNEH 130
>gi|330925707|ref|XP_003301159.1| mitochondrial 54S ribosomal protein YmL23 [Pyrenophora teres f.
teres 0-1]
gi|311324338|gb|EFQ90749.1| hypothetical protein PTT_12594 [Pyrenophora teres f. teres 0-1]
Length = 174
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LKE ++ M + E +RKAV MLP+N+LR +R +L+ F G HP+
Sbjct: 85 GSLKELSMDRMMAKWGGGEVLRKAVSGMLPKNRLRKERLARLKTFEGQAHPY 136
>gi|222085551|ref|YP_002544081.1| 50S ribosomal protein L13 [Agrobacterium radiobacter K84]
gi|398378329|ref|ZP_10536493.1| ribosomal protein L13, bacterial type [Rhizobium sp. AP16]
gi|254798473|sp|B9JD18.1|RL13_AGRRK RecName: Full=50S ribosomal protein L13
gi|221722999|gb|ACM26155.1| ribosomal protein L13 [Agrobacterium radiobacter K84]
gi|397725083|gb|EJK85539.1| ribosomal protein L13, bacterial type [Rhizobium sp. AP16]
Length = 154
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YAGGIKERTARQIIEGRFPERVVEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|146341146|ref|YP_001206194.1| 50S ribosomal protein L13 [Bradyrhizobium sp. ORS 278]
gi|148255942|ref|YP_001240527.1| 50S ribosomal protein L13 [Bradyrhizobium sp. BTAi1]
gi|365892795|ref|ZP_09431037.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. STM 3809]
gi|166230964|sp|A5EKC7.1|RL13_BRASB RecName: Full=50S ribosomal protein L13
gi|166230965|sp|A4YVP3.1|RL13_BRASO RecName: Full=50S ribosomal protein L13
gi|146193952|emb|CAL77969.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. ORS 278]
gi|146408115|gb|ABQ36621.1| LSU ribosomal protein L13P [Bradyrhizobium sp. BTAi1]
gi|365331109|emb|CCE03568.1| 50S ribosomal subunit protein L13 [Bradyrhizobium sp. STM 3809]
Length = 154
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++GH+KERT ++ +E R P + KAV RM+PR L + LR++ G +HP
Sbjct: 80 FVGHVKERTARQILEGRFPERVLEKAVERMIPRGPLGRVQMGNLRVYGGPDHP 132
>gi|123443924|ref|YP_001007895.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238751345|ref|ZP_04612838.1| 50S ribosomal protein L13 [Yersinia rohdei ATCC 43380]
gi|238789744|ref|ZP_04633526.1| 50S ribosomal protein L13 [Yersinia frederiksenii ATCC 33641]
gi|332163069|ref|YP_004299646.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310075|ref|YP_006006131.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241995|ref|ZP_12868514.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420260113|ref|ZP_14762801.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433550837|ref|ZP_20506880.1| LSU ribosomal protein L13p (L13Ae) [Yersinia enterocolitica IP
10393]
gi|166199631|sp|A1JR94.1|RL13_YERE8 RecName: Full=50S ribosomal protein L13
gi|122090885|emb|CAL13767.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238710403|gb|EEQ02628.1| 50S ribosomal protein L13 [Yersinia rohdei ATCC 43380]
gi|238722103|gb|EEQ13761.1| 50S ribosomal protein L13 [Yersinia frederiksenii ATCC 33641]
gi|318604051|emb|CBY25549.1| LSU ribosomal protein L13p (L13Ae) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667299|gb|ADZ43943.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862742|emb|CBX72884.1| 50S ribosomal protein L13 [Yersinia enterocolitica W22703]
gi|351778551|gb|EHB20699.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404512424|gb|EKA26271.1| 50S ribosomal protein L13 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431787936|emb|CCO69920.1| LSU ribosomal protein L13p (L13Ae) [Yersinia enterocolitica IP
10393]
Length = 142
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 15 FILSLNDEM----------SVSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E + YR+ GH+ K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKRTDKIYYRHTGHIGGIKQATFEEMIARSPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGTEH 130
>gi|333980375|ref|YP_004518320.1| 50S ribosomal protein L13 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823856|gb|AEG16519.1| ribosomal protein L13 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 143
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK E + R P A+RKA++ MLP N+L +KLR++ G HP + E
Sbjct: 81 YPGGLKVTGYDELLARRPELAVRKAIVGMLPHNRLGARMAKKLRVYRGENHPHQAQKPEV 140
Query: 89 YVM 91
+ M
Sbjct: 141 WSM 143
>gi|395786192|ref|ZP_10465919.1| 50S ribosomal protein L13 [Bartonella tamiae Th239]
gi|423716915|ref|ZP_17691105.1| 50S ribosomal protein L13 [Bartonella tamiae Th307]
gi|395422490|gb|EJF88686.1| 50S ribosomal protein L13 [Bartonella tamiae Th239]
gi|395428989|gb|EJF95064.1| 50S ribosomal protein L13 [Bartonella tamiae Th307]
Length = 154
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT+++ +E R P + KA+ RM+PR L + + LR++ GS+HP
Sbjct: 80 YPGGIKERTVRQIIEGRFPERVVEKAIERMIPRGPLGRRQMKNLRVYAGSQHP 132
>gi|170091316|ref|XP_001876880.1| mitochondrial 54S ribosomal protein YmL23 [Laccaria bicolor
S238N-H82]
gi|164648373|gb|EDR12616.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 172
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFP 75
+ G LKE + M ++P IR AV MLP+NKLR+ R +L+IFP
Sbjct: 81 FPGGLKETPYESMMVKNPDHVIRHAVSGMLPKNKLRERRLDRLKIFP 127
>gi|284008701|emb|CBA75370.1| 50S ribosomal protein L13 [Arsenophonus nasoniae]
Length = 142
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ + + E + YR YIG +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVVNAEKVAVTGNKREDKIYYRHTGYIGGIKQATFEEMIARHPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RK++++ GS+H
Sbjct: 113 PLGRAMYRKMKVYAGSDH 130
>gi|294155673|ref|YP_003560057.1| 50S ribosomal protein L13 [Mycoplasma crocodyli MP145]
gi|291600400|gb|ADE19896.1| 50S ribosomal protein L13 [Mycoplasma crocodyli MP145]
Length = 144
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 15 FILSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRK 70
+L+ N E Y Y G LK T ++ E+ PT ++KA+ M+P KL D + R
Sbjct: 63 IVLTANKETDKVYYSHSGYPGGLKSITAEKLREKKPTALVQKAIFGMVPHTKLGDKQRRN 122
Query: 71 LRIFPGSEH 79
L ++ G +H
Sbjct: 123 LFVYVGGDH 131
>gi|224532298|ref|ZP_03672930.1| ribosomal protein L13 [Borrelia valaisiana VS116]
gi|224511763|gb|EEF82169.1| ribosomal protein L13 [Borrelia valaisiana VS116]
Length = 154
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
RY G L T + ER P + A+ MLP+ L + R LR+FPGSEH
Sbjct: 85 RYPGGLYSDTFRTLSERKPCAPLEIAIKGMLPKGPLGRNLFRNLRVFPGSEHAL 138
>gi|381181843|ref|ZP_09890671.1| 50S ribosomal protein L13 [Listeriaceae bacterium TTU M1-001]
gi|380318218|gb|EIA21509.1| 50S ribosomal protein L13 [Listeriaceae bacterium TTU M1-001]
Length = 145
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILSLNDEMS---VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L + + + YR Y G LK RT E +P + I +V MLP+N
Sbjct: 54 FVIVINAGKVGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRANNPEKLIELSVKGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEH 79
L + +KL ++ GSEH
Sbjct: 114 SLGRGQFKKLHVYGGSEH 131
>gi|238764262|ref|ZP_04625214.1| 50S ribosomal protein L13 [Yersinia kristensenii ATCC 33638]
gi|238697543|gb|EEP90308.1| 50S ribosomal protein L13 [Yersinia kristensenii ATCC 33638]
gi|351720372|emb|CCA61571.1| 50S ribosomal protein L13 [Yersinia enterocolitica]
Length = 142
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 VSYRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
+ YR+ GH+ K+ T +E + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 73 IYYRHTGHIGGIKQATFEEMIARSPERVIEIAVKGMLPKGPLGRAMYRKLKVYAGTEH 130
>gi|296130450|ref|YP_003637700.1| 50S ribosomal protein L13 [Cellulomonas flavigena DSM 20109]
gi|296022265|gb|ADG75501.1| ribosomal protein L13 [Cellulomonas flavigena DSM 20109]
Length = 147
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 8 FFILRNLFILSLND---EMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N ++L E ++YR Y G L+ + +E+ P AI KAV MLP
Sbjct: 53 FVIVINAEKVALTGNKRETKLAYRHSGYPGGLRATRYADLLEKHPERAIEKAVRGMLPHT 112
Query: 62 KLRDDRDRKLRIFPGSEHPFGDRPLEPY 89
L + KL+++ G+EHP + +P+
Sbjct: 113 TLGRGQLSKLKVYRGAEHPHAAQQPKPF 140
>gi|238758298|ref|ZP_04619476.1| 50S ribosomal protein L13 [Yersinia aldovae ATCC 35236]
gi|238703421|gb|EEP95960.1| 50S ribosomal protein L13 [Yersinia aldovae ATCC 35236]
Length = 142
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +K+ T +E + R P I AV MLP+ L RKL+++ G+EH
Sbjct: 80 YVGGIKQATFEEMIARSPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGTEH 130
>gi|163753797|ref|ZP_02160920.1| 50S ribosomal protein L13 [Kordia algicida OT-1]
gi|161326011|gb|EDP97337.1| 50S ribosomal protein L13 [Kordia algicida OT-1]
Length = 151
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T E E+DP + + K+V MLP+NKL R L+++ G+EH
Sbjct: 85 YPGGQRSLTATELFEKDPAKLVEKSVKGMLPKNKLGSALFRNLKVYVGAEH 135
>gi|237742394|ref|ZP_04572875.1| LSU ribosomal protein L13P [Fusobacterium sp. 4_1_13]
gi|256845722|ref|ZP_05551180.1| ribosomal protein L13 [Fusobacterium sp. 3_1_36A2]
gi|294785032|ref|ZP_06750320.1| ribosomal protein L13 [Fusobacterium sp. 3_1_27]
gi|229430042|gb|EEO40254.1| LSU ribosomal protein L13P [Fusobacterium sp. 4_1_13]
gi|256719281|gb|EEU32836.1| ribosomal protein L13 [Fusobacterium sp. 3_1_36A2]
gi|294486746|gb|EFG34108.1| ribosomal protein L13 [Fusobacterium sp. 3_1_27]
Length = 144
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV L + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNASKLVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|373116914|ref|ZP_09531065.1| ribosomal protein L13 [Lachnospiraceae bacterium 7_1_58FAA]
gi|371668990|gb|EHO34094.1| ribosomal protein L13 [Lachnospiraceae bacterium 7_1_58FAA]
Length = 143
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE + M++ P A++ AV MLPRN + D +L I+ G+EHP
Sbjct: 80 WIGGLKETKYRLLMQQKPELAMQLAVRGMLPRNIITKDSLSRLHIYRGAEHP 131
>gi|365858277|ref|ZP_09398223.1| ribosomal protein L13 [Acetobacteraceae bacterium AT-5844]
gi|363714417|gb|EHL97927.1| ribosomal protein L13 [Acetobacteraceae bacterium AT-5844]
Length = 156
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPR 60
+VV + + + SV Y + G+ +KERT++E++E R P I KAV RM+ R
Sbjct: 56 HVVIVNAEKVRVTGNKADQSVFYWHTGYPGGIKERTVRERLESRFPERVIEKAVERMITR 115
Query: 61 NKLRDDRDRKLRIFPGSEHPF-GDRP 85
L + + L ++ G+EHP G +P
Sbjct: 116 GPLGRRQMKNLHVYAGAEHPHAGAQP 141
>gi|126736433|ref|ZP_01752174.1| ribosomal protein L13 [Roseobacter sp. CCS2]
gi|126713971|gb|EBA10841.1| ribosomal protein L13 [Roseobacter sp. CCS2]
Length = 165
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 27 YRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y + GH +KE+T E +E ++P + KAV RMLP KL + LR+F G+EH
Sbjct: 74 YWHTGHPGGIKEKTKAEILEGKNPERVVMKAVQRMLPGGKLSRQQMTHLRVFAGTEH 130
>gi|456864080|gb|EMF82509.1| ribosomal protein L13 [Leptospira weilii serovar Topaz str. LT2116]
Length = 149
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 17 LSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
++ N EM Y RY G + E K+ + + P + I +AV MLP++KL D +
Sbjct: 71 VTGNKEMQKMYYHHSRYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKILTHCK 130
Query: 73 IFPGSEH 79
IF G+EH
Sbjct: 131 IFSGAEH 137
>gi|114567806|ref|YP_754960.1| 50S ribosomal protein L13 [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|118573459|sp|Q0AUL5.1|RL13_SYNWW RecName: Full=50S ribosomal protein L13
gi|114338741|gb|ABI69589.1| LSU ribosomal protein L13P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 144
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L+E + +++ P +AI AV MLP N+L +KL+++ GSEHP
Sbjct: 80 YPGGLREMDYRTLLQKRPEKAIEAAVQGMLPHNRLGRSMIKKLKVYSGSEHP 131
>gi|258645725|ref|ZP_05733194.1| ribosomal protein L13 [Dialister invisus DSM 15470]
gi|260403094|gb|EEW96641.1| ribosomal protein L13 [Dialister invisus DSM 15470]
Length = 146
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG + + + + P + A+ MLP+ KL D RKL+++ GSEHP
Sbjct: 81 YIGGDRYQKAGDALREKPVWVVEHAIRGMLPKTKLGDQMYRKLKVYAGSEHP 132
>gi|114771077|ref|ZP_01448517.1| 50S ribosomal protein L13 [Rhodobacterales bacterium HTCC2255]
gi|114548359|gb|EAU51245.1| 50S ribosomal protein L13 [alpha proteobacterium HTCC2255]
Length = 155
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 25 VSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+ Y + GH +K+RT + +E + P + KAV RMLP L ++ R LRI+ G+EHP
Sbjct: 73 IHYWHTGHPGGIKQRTAGQILEGKFPERLLEKAVQRMLPGGPLSREQMRNLRIYAGAEHP 132
>gi|254302742|ref|ZP_04970100.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322934|gb|EDK88184.1| ribosomal protein L13 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 144
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKIVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|410447336|ref|ZP_11301432.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86E]
gi|409979611|gb|EKO36369.1| ribosomal protein L13 [SAR86 cluster bacterium SAR86E]
Length = 144
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G LK + K+ ++ P I +AV MLP+NKL +KL+++ G HP + EP
Sbjct: 80 YPGGLKTKAFKDVLDDKPEYIIEEAVKGMLPKNKLGKQMFKKLKVYKGESHPHESQ--EP 137
Query: 89 YVMPPR 94
+ P+
Sbjct: 138 QIWEPK 143
>gi|327398375|ref|YP_004339244.1| 50S ribosomal protein L13 [Hippea maritima DSM 10411]
gi|327181004|gb|AEA33185.1| ribosomal protein L13 [Hippea maritima DSM 10411]
Length = 143
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG LK K+ + + P I AV MLP+N+L + KL+I+P ++HP
Sbjct: 81 YIGGLKAVKAKDMIAKYPERVIAHAVKGMLPKNRLANKLITKLKIYPEADHP 132
>gi|431930567|ref|YP_007243613.1| 50S ribosomal protein L13 [Thioflavicoccus mobilis 8321]
gi|431828870|gb|AGA89983.1| ribosomal protein L13, bacterial type [Thioflavicoccus mobilis
8321]
Length = 142
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 19 LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGS 77
L D+M + Y+G+LK +L + + + P +AI +AV MLPRN L +KL ++ G
Sbjct: 69 LQDKMYYRHTGYVGNLKSISLAKLLAKAPEQAIEQAVKGMLPRNTLGRAMFKKLHVYAGP 128
Query: 78 EH 79
H
Sbjct: 129 TH 130
>gi|19703672|ref|NP_603234.1| 50S ribosomal protein L13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296327257|ref|ZP_06869812.1| 50S ribosomal protein L13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713792|gb|AAL94533.1| LSU ribosomal protein L13P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296155614|gb|EFG96376.1| 50S ribosomal protein L13 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 144
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKIVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|404214245|ref|YP_006668439.1| Ribosomal protein L13 [Gordonia sp. KTR9]
gi|403645044|gb|AFR48284.1| Ribosomal protein L13 [Gordonia sp. KTR9]
Length = 151
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+VV + + S + ++Y + GH LK RT E + P I KAV MLP
Sbjct: 57 FVVVINAEKVALTSNKADRKLNYTHSGHPGGLKSRTTTELLATYPERVIEKAVKGMLPST 116
Query: 62 KLRDDRDRKLRIFPGSEHPF-GDRPL 86
KL KL+++ G HP RP+
Sbjct: 117 KLGRAMASKLKVYAGPNHPHAAQRPV 142
>gi|339441703|ref|YP_004707708.1| 50S ribosomal protein L13 [Clostridium sp. SY8519]
gi|338901104|dbj|BAK46606.1| hypothetical protein CXIVA_06390 [Clostridium sp. SY8519]
Length = 144
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE +E+ P + AV MLP+ L +KL ++ G +H
Sbjct: 82 YVGGMKETTLKEMLEKHPERVVGFAVKGMLPKGPLGRQMYKKLFVYAGPDH 132
>gi|333997531|ref|YP_004530143.1| 50S ribosomal protein L13 [Treponema primitia ZAS-2]
gi|333738897|gb|AEF84387.1| ribosomal protein L13 [Treponema primitia ZAS-2]
Length = 142
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
Y+G LK T ++ R PT + A+ MLP+ L + ++++ GSEHP G +
Sbjct: 80 YVGGLKTVTYEKLAARHPTSPLELAIKGMLPKGPLGRKLWKNVKVYAGSEHPHGAQ 135
>gi|90416992|ref|ZP_01224921.1| Ribosomal protein L13 [gamma proteobacterium HTCC2207]
gi|90331339|gb|EAS46583.1| Ribosomal protein L13 [gamma proteobacterium HTCC2207]
Length = 142
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK+ T + +E+ P I+ AV MLPR L + RKL+++ GS HP
Sbjct: 80 YPGGLKDITFDKLIEKAPERVIQSAVKGMLPRGPLGREMFRKLKVYVGSAHP 131
>gi|345875399|ref|ZP_08827193.1| 50S ribosomal protein L13 [Neisseria weaveri LMG 5135]
gi|417958436|ref|ZP_12601350.1| 50S ribosomal protein L13 [Neisseria weaveri ATCC 51223]
gi|343966650|gb|EGV34903.1| 50S ribosomal protein L13 [Neisseria weaveri ATCC 51223]
gi|343969307|gb|EGV37524.1| 50S ribosomal protein L13 [Neisseria weaveri LMG 5135]
Length = 142
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEPYV 90
G + ERT +E E+ P A+ KAV MLP+ L +KL+++ GSEH G +P V
Sbjct: 82 GGIYERTFREMQEQFPGRALEKAVKGMLPKGPLGYAMIKKLKVYAGSEH--GHAAQQPKV 139
Query: 91 M 91
+
Sbjct: 140 L 140
>gi|451343289|ref|ZP_21912363.1| ribosomal protein L13 [Eggerthia catenaformis OT 569 = DSM 20559]
gi|449338063|gb|EMD17217.1| ribosomal protein L13 [Eggerthia catenaformis OT 569 = DSM 20559]
Length = 145
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
++G LK +T ++ + DP + AV MLP N L + KL ++ G EHP
Sbjct: 81 FLGGLKSKTARQFRDNDPVGFVEAAVKGMLPHNTLGRKQGMKLFVYAGGEHP 132
>gi|347731726|ref|ZP_08864814.1| ribosomal protein L13 [Desulfovibrio sp. A2]
gi|347519533|gb|EGY26690.1| ribosomal protein L13 [Desulfovibrio sp. A2]
Length = 144
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G L E TL++ + P + AV MLP+N+L +KL+++ G EHP + +P
Sbjct: 80 YVGGLTEITLEKLLASHPERVLMNAVRGMLPKNRLGRAMLKKLKVYAGPEHPHAAQNPQP 139
Query: 89 YVM 91
+
Sbjct: 140 LAI 142
>gi|403336055|gb|EJY67215.1| 50S ribosomal protein L13 [Oxytricha trifallax]
Length = 384
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDR-DRKLRIFPGSEH 79
Y+G LKE +++ +ERDP + IR+AV MLP+N +R+ D L I G H
Sbjct: 237 YVGGLKEIVMEDLIERDPCQIIRRAVKGMLPKNTIREIMLDHNLFIHEGLYH 288
>gi|421526856|ref|ZP_15973462.1| 50S ribosomal protein L13 [Fusobacterium nucleatum ChDC F128]
gi|402256964|gb|EJU07440.1| 50S ribosomal protein L13 [Fusobacterium nucleatum ChDC F128]
Length = 144
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILS--LNDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YVV + + + L D++ ++ + G ++ R L E + + P E + AV RMLP+N
Sbjct: 55 YVVVTNVEKIVVTGKKLTDKVYYNHSGFPGGIRARKLGEILAKKPEELLMLAVKRMLPKN 114
Query: 62 KLRDDRDRKLRIFPGSEH 79
KL + +LR+F G+EH
Sbjct: 115 KLGRQQLTRLRVFAGAEH 132
>gi|398331081|ref|ZP_10515786.1| 50S ribosomal protein L13 [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 149
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 17 LSLNDEMSVSY----RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
++ N EM Y RY G + E K+ + + P + I +AV MLP++KL D +
Sbjct: 71 VTGNKEMQKIYYHHSRYPGGMTETVFKDLITKQPEKVIYEAVKGMLPKSKLGDKILTHCK 130
Query: 73 IFPGSEH 79
IF G+EH
Sbjct: 131 IFSGAEH 137
>gi|420241028|ref|ZP_14745198.1| ribosomal protein L13, bacterial type [Rhizobium sp. CF080]
gi|398073045|gb|EJL64230.1| ribosomal protein L13, bacterial type [Rhizobium sp. CF080]
Length = 154
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P I KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|365845173|ref|ZP_09385961.1| ribosomal protein L13 [Flavonifractor plautii ATCC 29863]
gi|364561492|gb|EHM39390.1| ribosomal protein L13 [Flavonifractor plautii ATCC 29863]
Length = 143
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG LKE + M++ P A++ AV MLPRN + D +L I+ G+EHP
Sbjct: 80 WIGGLKETKYRLLMQQKPELAMQLAVRGMLPRNIITKDSLSRLHIYRGAEHP 131
>gi|344343395|ref|ZP_08774263.1| ribosomal protein L13 [Marichromatium purpuratum 984]
gi|343804818|gb|EGV22716.1| ribosomal protein L13 [Marichromatium purpuratum 984]
Length = 145
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G+LK +L++ +E P AI+ AV MLPR L RKLR++ G H
Sbjct: 81 YVGNLKSTSLEKLLETAPERAIQLAVKGMLPRGPLGRAMFRKLRVYAGPNH 131
>gi|414153604|ref|ZP_11409927.1| 50S ribosomal protein L13 [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411455002|emb|CCO07831.1| 50S ribosomal protein L13 [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 143
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK+ + + +++ P + KAV MLP N+L + +KL+++ GSEHP
Sbjct: 81 YPGGLKQFSYRIMLDKRPELMVEKAVKGMLPHNRLGAQQFKKLKVYAGSEHP 132
>gi|374314295|ref|YP_005060724.1| 50S ribosomal protein L13 [Serratia symbiotica str. 'Cinara cedri']
gi|363988521|gb|AEW44712.1| 50S ribosomal protein L13 [Serratia symbiotica str. 'Cinara cedri']
Length = 142
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVS---------YR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN D++SV+ YR Y+G +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNADKVSVTGNKRTDKVYYRHTGYVGGIKQATFQEMIARRPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G++H
Sbjct: 113 PLGRAMFRKLKVYAGTQH 130
>gi|190891252|ref|YP_001977794.1| 50S ribosomal protein L13 [Rhizobium etli CIAT 652]
gi|226702897|sp|B3PVW4.1|RL13_RHIE6 RecName: Full=50S ribosomal protein L13
gi|190696531|gb|ACE90616.1| 50S ribosomal protein L13 [Rhizobium etli CIAT 652]
Length = 154
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|386288582|ref|ZP_10065722.1| 50S ribosomal protein L13 [gamma proteobacterium BDW918]
gi|385278137|gb|EIF42109.1| 50S ribosomal protein L13 [gamma proteobacterium BDW918]
Length = 142
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRPLE 87
Y G LK + ++ +E+ P I+ AV MLP+N L +KL+++ G+EHP +P+E
Sbjct: 80 YPGGLKSMSFEKLIEKAPERVIQGAVKGMLPKNPLGRAMFKKLKVYAGTEHPHTAQQPVE 139
>gi|349575827|ref|ZP_08887732.1| 50S ribosomal protein L13 [Neisseria shayeganii 871]
gi|348012571|gb|EGY51513.1| 50S ribosomal protein L13 [Neisseria shayeganii 871]
Length = 142
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
Y++ L + +E + YR+ G + +RT +E ++ P A+ KAV MLP+
Sbjct: 53 YIIVINADKLRVTGAKNEDKIYYRHSGFPGGIYQRTFREMQDQFPGRALEKAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L +KL+++ G+EH
Sbjct: 113 PLGYAMIKKLKVYAGAEH 130
>gi|456887676|gb|EMF98703.1| ribosomal protein L13 [Leptospira borgpetersenii str. 200701203]
Length = 167
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 104 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 155
>gi|293394236|ref|ZP_06638536.1| 50S ribosomal protein L13 [Serratia odorifera DSM 4582]
gi|291423214|gb|EFE96443.1| 50S ribosomal protein L13 [Serratia odorifera DSM 4582]
Length = 142
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 20 NDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
ND+M + +IG +KE T +E + R P I AV MLP+ L RKL+++ G+E
Sbjct: 70 NDKMYYHHTGHIGGIKEATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGTE 129
Query: 79 H 79
H
Sbjct: 130 H 130
>gi|258513674|ref|YP_003189896.1| 50S ribosomal protein L13 [Desulfotomaculum acetoxidans DSM 771]
gi|257777379|gb|ACV61273.1| ribosomal protein L13 [Desulfotomaculum acetoxidans DSM 771]
Length = 148
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +K + M+++P + KAV MLP N L +KL+++ GSEHP
Sbjct: 80 YPGGIKMTNYETMMQKNPELMVTKAVKGMLPHNSLGRSMIKKLKVYKGSEHP 131
>gi|225573075|ref|ZP_03781830.1| hypothetical protein RUMHYD_01266 [Blautia hydrogenotrophica DSM
10507]
gi|225039561|gb|EEG49807.1| ribosomal protein L13 [Blautia hydrogenotrophica DSM 10507]
Length = 142
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G +KE TLKE + + P + + AV MLP+ L +KL ++ G EH
Sbjct: 80 YVGGMKETTLKEMLAKKPEKVLELAVKGMLPKGPLGRAMHKKLFVYAGPEH 130
>gi|296126014|ref|YP_003633266.1| 50S ribosomal protein L13 [Brachyspira murdochii DSM 12563]
gi|296017830|gb|ADG71067.1| ribosomal protein L13 [Brachyspira murdochii DSM 12563]
Length = 151
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ +++ + + + YR+ G+ +K + E +E++P ++ AV ML N
Sbjct: 62 YVIIINAKDIVLTGNKKKGKIHYRHTGYPGGIKAVSYGELLEKNPERMVKIAVKGMLSHN 121
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ GSEHP
Sbjct: 122 PLGRLHLKKLKVYAGSEHP 140
>gi|242309186|ref|ZP_04808341.1| 50S ribosomal protein L13 [Helicobacter pullorum MIT 98-5489]
gi|239524227|gb|EEQ64093.1| 50S ribosomal protein L13 [Helicobacter pullorum MIT 98-5489]
Length = 139
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TLKE +E+ P + + AV MLP+ KL +KL+++ + HP
Sbjct: 81 YFGSTKSKTLKEMLEKHPEKLYKLAVRGMLPKTKLGRAMIKKLKVYCDANHP 132
>gi|440232666|ref|YP_007346459.1| LSU ribosomal protein L13P [Serratia marcescens FGI94]
gi|440054371|gb|AGB84274.1| LSU ribosomal protein L13P [Serratia marcescens FGI94]
Length = 142
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 20 NDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
ND+M + +IG +KE T +E + R P I AV MLP+ L RKL+++ G+E
Sbjct: 70 NDKMYYHHTGHIGGIKEATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGTE 129
Query: 79 H 79
H
Sbjct: 130 H 130
>gi|218886071|ref|YP_002435392.1| 50S ribosomal protein L13 [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226702846|sp|B8DPL7.1|RL13_DESVM RecName: Full=50S ribosomal protein L13
gi|218757025|gb|ACL07924.1| ribosomal protein L13 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 144
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y+G L E TL++ + P + AV MLP+N+L +KL+++ G EHP + +P
Sbjct: 80 YVGGLHEITLEKLLASHPERVLMNAVRGMLPKNRLGRAMLKKLKVYAGPEHPHAAQNPQP 139
Query: 89 YVM 91
+
Sbjct: 140 LAI 142
>gi|242787219|ref|XP_002480960.1| mitochondrial 54S ribosomal protein YmL23 [Talaromyces stipitatus
ATCC 10500]
gi|218721107|gb|EED20526.1| 50S ribosomal protein L13 [Talaromyces stipitatus ATCC 10500]
Length = 173
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 31 GHLKERTLKEQMER-DPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK T+ + E+ E +++AV MLP+N+LRD R +L+ F G +HP+
Sbjct: 85 GSLKSMTMDKMFEKWGGGEVLKRAVRGMLPKNRLRDKRLARLKTFEGLQHPY 136
>gi|33593897|ref|NP_881541.1| 50S ribosomal protein L13 [Bordetella pertussis Tohama I]
gi|161609260|ref|NP_890891.2| 50S ribosomal protein L13 [Bordetella bronchiseptica RB50]
gi|161610378|ref|NP_886036.2| 50S ribosomal protein L13 [Bordetella parapertussis 12822]
gi|384205202|ref|YP_005590941.1| 50S ribosomal protein L13 [Bordetella pertussis CS]
gi|408416670|ref|YP_006627377.1| 50s ribosomal protein L13 [Bordetella pertussis 18323]
gi|81713259|sp|Q7VUV8.1|RL13_BORPE RecName: Full=50S ribosomal protein L13
gi|118573382|sp|Q7WFC3.2|RL13_BORBR RecName: Full=50S ribosomal protein L13
gi|118573383|sp|Q7W3Z1.2|RL13_BORPA RecName: Full=50S ribosomal protein L13
gi|33563971|emb|CAE43234.1| 50s ribosomal protein L13 [Bordetella pertussis Tohama I]
gi|332383316|gb|AEE68163.1| 50S ribosomal protein L13 [Bordetella pertussis CS]
gi|401778840|emb|CCJ64297.1| 50s ribosomal protein L13 [Bordetella pertussis 18323]
Length = 142
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G ++E ++ +R P AI+KAV MLP+ L +KL+++ G+EHP
Sbjct: 80 YPGGIRETNFEKMQQRFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHP 131
>gi|114706904|ref|ZP_01439804.1| 50S ribosomal protein L13 [Fulvimarina pelagi HTCC2506]
gi|114537852|gb|EAU40976.1| 50S ribosomal protein L13 [Fulvimarina pelagi HTCC2506]
Length = 154
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 27 YRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y + GH +KER ++ +E R P + KAV RMLPR L + + LR++ GSEHP
Sbjct: 75 YWHTGHPGGIKERKARDILEGRFPERVLEKAVERMLPRGPLGRQQLKNLRVYAGSEHP 132
>gi|443329321|ref|ZP_21057908.1| ribosomal protein L13, bacterial type [Xenococcus sp. PCC 7305]
gi|442791063|gb|ELS00563.1| ribosomal protein L13, bacterial type [Xenococcus sp. PCC 7305]
Length = 151
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFG 82
G +K+ T ++ +R P I KAV MLP+N L KL+++ G+EHP G
Sbjct: 83 GGMKQETFEQLQKRIPERIIEKAVKGMLPKNALGRKLFTKLKVYAGAEHPHG 134
>gi|323703514|ref|ZP_08115160.1| ribosomal protein L13 [Desulfotomaculum nigrificans DSM 574]
gi|333922482|ref|YP_004496062.1| 50S ribosomal protein L13 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323531505|gb|EGB21398.1| ribosomal protein L13 [Desulfotomaculum nigrificans DSM 574]
gi|333748043|gb|AEF93150.1| ribosomal protein L13 [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 143
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK+ ++ + + P + KA+ MLP N+L + + +KL+++ GSEHP
Sbjct: 81 YPGGLKQTPYRQMLAKRPELIMEKAIKGMLPHNRLGEQQFKKLKVYSGSEHP 132
>gi|429123879|ref|ZP_19184411.1| 50S ribosomal protein L13 [Brachyspira hampsonii 30446]
gi|445062077|ref|ZP_21374514.1| 50S ribosomal protein L13 [Brachyspira hampsonii 30599]
gi|426280225|gb|EKV57241.1| 50S ribosomal protein L13 [Brachyspira hampsonii 30446]
gi|444506544|gb|ELV06869.1| 50S ribosomal protein L13 [Brachyspira hampsonii 30599]
Length = 151
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ +++ + + + YR+ G+ +K + E +E++P ++ AV ML N
Sbjct: 62 YVIIINAKDIVLTGNKKKGKIHYRHTGYPGGIKSISYGELLEKNPERMVKIAVKGMLSHN 121
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ GSEHP
Sbjct: 122 PLGRLHLKKLKVYAGSEHP 140
>gi|344338753|ref|ZP_08769684.1| ribosomal protein L13 [Thiocapsa marina 5811]
gi|343801335|gb|EGV19278.1| ribosomal protein L13 [Thiocapsa marina 5811]
Length = 145
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
YIG+LK L + ++ P AI AV MLPR L +KLR++ G EH G + +P
Sbjct: 81 YIGNLKSTNLAKLLDSKPERAIEIAVKGMLPRGPLGRAMFKKLRVYAGPEH--GHQAQQP 138
Query: 89 YVM 91
V+
Sbjct: 139 QVL 141
>gi|302390991|ref|YP_003826811.1| 50S ribosomal protein L13 [Acetohalobium arabaticum DSM 5501]
gi|302203068|gb|ADL11746.1| LSU ribosomal protein L13P [Acetohalobium arabaticum DSM 5501]
Length = 142
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LK + +E +E P + I AV M+P+NKL +KL+I+ SEHP
Sbjct: 80 YPGGLKSTSYRELLEEKPEKVIELAVKGMVPKNKLGRKMMKKLKIYAASEHP 131
>gi|415726158|ref|ZP_11470659.1| 50S ribosomal protein L13 [Gardnerella vaginalis 00703Dmash]
gi|388064031|gb|EIK86599.1| 50S ribosomal protein L13 [Gardnerella vaginalis 00703Dmash]
Length = 149
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
G L+ + E +E+DP I AV MLP+N+L + +LR+F G+EHP
Sbjct: 81 GGLRRDSYAELLEKDPKRIIMAAVKGMLPKNRLAKVQLDRLRVFTGAEHP 130
>gi|374578977|ref|ZP_09652071.1| ribosomal protein L13, bacterial type [Desulfosporosinus youngiae
DSM 17734]
gi|374415059|gb|EHQ87494.1| ribosomal protein L13, bacterial type [Desulfosporosinus youngiae
DSM 17734]
Length = 143
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 19 LNDEMSVSYR----YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIF 74
LND+M YR Y G LKE K+ M+ P A+ AV MLP NKL KL+++
Sbjct: 69 LNDKM---YRRHSGYPGGLKEVPYKKLMQTMPERAMEHAVKGMLPHNKLGAQMYTKLKVY 125
Query: 75 PGSEHP 80
G HP
Sbjct: 126 KGDTHP 131
>gi|320353074|ref|YP_004194413.1| 50S ribosomal protein L13 [Desulfobulbus propionicus DSM 2032]
gi|320121576|gb|ADW17122.1| LSU ribosomal protein L13P [Desulfobulbus propionicus DSM 2032]
Length = 142
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G + ++ +E + + P E IR AV MLP+NKL + +KL+++ G +HP
Sbjct: 80 YPGGITTQSAREVLAKKPEELIRMAVRGMLPKNKLGRAQLKKLKVYSGKDHP 131
>gi|85702779|ref|ZP_01033883.1| 50S ribosomal protein L13 [Roseovarius sp. 217]
gi|85671707|gb|EAQ26564.1| 50S ribosomal protein L13 [Roseovarius sp. 217]
Length = 154
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 17 LSLNDEMSVSYRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLR 72
L+ N +Y + GH +K RT E +E + P + +AV RMLP N+L + LR
Sbjct: 64 LTGNKRSKPNYWHTGHPGGIKSRTTGEILEGKYPERVVMQAVKRMLPGNRLSRTQMTNLR 123
Query: 73 IFPGSEHP 80
++ G EHP
Sbjct: 124 VYAGGEHP 131
>gi|49474262|ref|YP_032304.1| 50S ribosomal protein L13 [Bartonella quintana str. Toulouse]
gi|81696036|sp|Q6FZQ6.1|RL13_BARQU RecName: Full=50S ribosomal protein L13
gi|49239766|emb|CAF26153.1| 50s ribosomal protein l13 [Bartonella quintana str. Toulouse]
Length = 154
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + R L ++ GS++P
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLRNLHVYAGSQNP 132
>gi|418735760|ref|ZP_13292167.1| ribosomal protein L13 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410748617|gb|EKR01514.1| ribosomal protein L13 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 149
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 86 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 137
>gi|354558486|ref|ZP_08977741.1| ribosomal protein L13 [Desulfitobacterium metallireducens DSM
15288]
gi|353546964|gb|EHC16411.1| ribosomal protein L13 [Desulfitobacterium metallireducens DSM
15288]
Length = 143
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE + ME P A+ A+ MLP NKL KL+++ GSEHP
Sbjct: 80 YPGGLKEVPYRRLMETMPERAVEHAIKGMLPHNKLGAKMYTKLKVYRGSEHP 131
>gi|323346558|gb|EGA80845.1| Mrpl23p [Saccharomyces cerevisiae Lalvin QA23]
Length = 159
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 31 GHLKERTL-KEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK +T+ K ++ E ++KAV MLP+NKLR R +L++F GSE+P+
Sbjct: 85 GQLKLQTMNKVVADKGFGEILKKAVSGMLPKNKLRKQRLDRLKVFDGSENPY 136
>gi|310789732|gb|EFQ25265.1| ribosomal protein L13 [Glomerella graminicola M1.001]
Length = 179
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYI---GHLKERTLKEQMER-DPTEAIRKAVLRMLPR 60
YVV L + YR+ G L+ T+ ME+ E +RKAV MLP+
Sbjct: 67 YVVVTDCAALHVTGRKKWQKTYYRHNTRPGSLQAVTMDVLMEKHGGAEVLRKAVSGMLPK 126
Query: 61 NKLRDDRDRKLRIFPGSEHPF 81
N+LR R +L+ F G HP+
Sbjct: 127 NRLRAPRLARLKAFEGEAHPY 147
>gi|418721674|ref|ZP_13280849.1| ribosomal protein L13 [Leptospira borgpetersenii str. UI 09149]
gi|421092468|ref|ZP_15553208.1| ribosomal protein L13 [Leptospira borgpetersenii str. 200801926]
gi|410364695|gb|EKP15708.1| ribosomal protein L13 [Leptospira borgpetersenii str. 200801926]
gi|410741835|gb|EKQ90587.1| ribosomal protein L13 [Leptospira borgpetersenii str. UI 09149]
Length = 150
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 87 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 138
>gi|410087116|ref|ZP_11283821.1| LSU ribosomal protein L13p (L13Ae) [Morganella morganii SC01]
gi|421492801|ref|ZP_15940160.1| RPLM [Morganella morganii subsp. morganii KT]
gi|455740484|ref|YP_007506750.1| LSU ribosomal protein L13p (L13Ae) [Morganella morganii subsp.
morganii KT]
gi|400192906|gb|EJO26043.1| RPLM [Morganella morganii subsp. morganii KT]
gi|409766345|gb|EKN50439.1| LSU ribosomal protein L13p (L13Ae) [Morganella morganii SC01]
gi|455422047|gb|AGG32377.1| LSU ribosomal protein L13p (L13Ae) [Morganella morganii subsp.
morganii KT]
Length = 142
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 15 FILSLNDEM----------SVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN E V YR Y+G +K+ T +E + R P I AV MLP+
Sbjct: 53 YIIVLNAEKVAVTGNKRTDKVYYRHTGYVGGIKQATFEEMIARHPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|399038265|ref|ZP_10734566.1| ribosomal protein L13, bacterial type [Rhizobium sp. CF122]
gi|409436873|ref|ZP_11264032.1| 50S ribosomal subunit protein L13 [Rhizobium mesoamericanum
STM3625]
gi|398063928|gb|EJL55635.1| ribosomal protein L13, bacterial type [Rhizobium sp. CF122]
gi|408751347|emb|CCM75186.1| 50S ribosomal subunit protein L13 [Rhizobium mesoamericanum
STM3625]
Length = 154
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P + KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|398353135|ref|YP_006398599.1| 50S ribosomal protein L13 [Sinorhizobium fredii USDA 257]
gi|390128461|gb|AFL51842.1| 50S ribosomal protein L13 [Sinorhizobium fredii USDA 257]
Length = 154
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P I KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|288573190|ref|ZP_06391547.1| ribosomal protein L13 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568931|gb|EFC90488.1| ribosomal protein L13 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 142
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G LKE T E + + P I K V M+PRNKL+ RKL+++ G HP
Sbjct: 82 YPGGLKETTYGEILAKHPERLIEKVVKGMVPRNKLQ--LSRKLKVYAGPNHP 131
>gi|151945768|gb|EDN64009.1| YmL23 [Saccharomyces cerevisiae YJM789]
gi|190407470|gb|EDV10737.1| 60S ribosomal protein L23, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|207341116|gb|EDZ69260.1| YOR150Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272783|gb|EEU07754.1| Mrpl23p [Saccharomyces cerevisiae JAY291]
gi|259149633|emb|CAY86437.1| Mrpl23p [Saccharomyces cerevisiae EC1118]
gi|323302905|gb|EGA56709.1| Mrpl23p [Saccharomyces cerevisiae FostersB]
gi|323335541|gb|EGA76826.1| Mrpl23p [Saccharomyces cerevisiae Vin13]
gi|323352112|gb|EGA84649.1| Mrpl23p [Saccharomyces cerevisiae VL3]
gi|349581307|dbj|GAA26465.1| K7_Mrpl23p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763093|gb|EHN04624.1| Mrpl23p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 163
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 31 GHLKERTL-KEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK +T+ K ++ E ++KAV MLP+NKLR R +L++F GSE+P+
Sbjct: 85 GQLKLQTMNKVVADKGFGEILKKAVSGMLPKNKLRKQRLDRLKVFDGSENPY 136
>gi|90022806|ref|YP_528633.1| 50S ribosomal protein L13 [Saccharophagus degradans 2-40]
gi|118573442|sp|Q21FV8.1|RL13_SACD2 RecName: Full=50S ribosomal protein L13
gi|89952406|gb|ABD82421.1| LSU ribosomal protein L13P [Saccharophagus degradans 2-40]
Length = 142
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 20 NDEMSVSYR-YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
D+M S+ +IG +K + ++ +++ P I+ AV MLPR L +KL+++ GSE
Sbjct: 70 TDKMYYSHTGFIGGIKSISFEKLIDKAPERTIQNAVKGMLPRGPLGRAMFKKLKVYGGSE 129
Query: 79 HP 80
HP
Sbjct: 130 HP 131
>gi|398336164|ref|ZP_10520869.1| 50S ribosomal protein L13 [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 149
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 86 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 137
>gi|124801264|ref|XP_001349647.1| mitochondrial large ribosomal subunit, putative [Plasmodium
falciparum 3D7]
gi|23503402|gb|AAC71918.2| mitochondrial large ribosomal subunit, putative [Plasmodium
falciparum 3D7]
Length = 212
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 37 TLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
+ K R+P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 140 SCKTVFARNPSMILNLAVKRMLPNNRLRQIFYRKLYVYPGALHPHWGIP 188
>gi|403530544|ref|YP_006665073.1| 50S ribosomal protein L13 [Bartonella quintana RM-11]
gi|403232616|gb|AFR26359.1| 50S ribosomal protein L13 [Bartonella quintana RM-11]
Length = 154
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
YIG +KERT ++ +E R P + KAV RM+PR L + R L ++ GS++P
Sbjct: 80 YIGGIKERTARQILEGRFPERVVEKAVERMIPRGPLGRRQLRNLHVYAGSQNP 132
>gi|298345422|ref|YP_003718109.1| 50S ribosomal protein L13 [Mobiluncus curtisii ATCC 43063]
gi|304390977|ref|ZP_07372929.1| 50S ribosomal protein L13 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315655829|ref|ZP_07908727.1| 50S ribosomal protein L13 [Mobiluncus curtisii ATCC 51333]
gi|315656246|ref|ZP_07909137.1| 50S ribosomal protein L13 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235483|gb|ADI66615.1| 50S ribosomal protein L13 [Mobiluncus curtisii ATCC 43063]
gi|304325860|gb|EFL93106.1| 50S ribosomal protein L13 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315489893|gb|EFU79520.1| 50S ribosomal protein L13 [Mobiluncus curtisii ATCC 51333]
gi|315493248|gb|EFU82848.1| 50S ribosomal protein L13 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 152
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF-GDRP 85
G LK + +E ++ P + I KAV M+PRN+L + KL+++ G EHP G P
Sbjct: 87 GGLKATSYQELRDKQPEKIIEKAVKGMMPRNRLSKQQLTKLKVYAGPEHPHAGQNP 142
>gi|120434506|ref|YP_860203.1| 50S ribosomal protein L13 [Gramella forsetii KT0803]
gi|117576656|emb|CAL65125.1| 50S ribosomal protein L13 [Gramella forsetii KT0803]
Length = 151
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 31 GHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
G K T E E+ P + KA+ MLP+NKL D R L+++ GSEH
Sbjct: 87 GGQKSLTAAELFEKSPERLVEKAIKGMLPKNKLGADLFRNLKVYVGSEH 135
>gi|6324724|ref|NP_014793.1| mitochondrial 54S ribosomal protein YmL23 [Saccharomyces cerevisiae
S288c]
gi|23822049|sp|Q12487.1|RM23_YEAST RecName: Full=54S ribosomal protein L23, mitochondrial; AltName:
Full=YmL23; Flags: Precursor
gi|1293710|gb|AAC49636.1| O3530p [Saccharomyces cerevisiae]
gi|1420377|emb|CAA99356.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270156|gb|AAS56459.1| YOR150W [Saccharomyces cerevisiae]
gi|285815030|tpg|DAA10923.1| TPA: mitochondrial 54S ribosomal protein YmL23 [Saccharomyces
cerevisiae S288c]
gi|392296477|gb|EIW07579.1| Mrpl23p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 163
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 31 GHLKERTL-KEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPF 81
G LK +T+ K ++ E ++KAV MLP+NKLR R +L++F GSE+P+
Sbjct: 85 GQLKLQTMNKVVADKGFGEILKKAVSGMLPKNKLRKQRLDRLKVFDGSENPY 136
>gi|30249455|ref|NP_841525.1| 50S ribosomal protein L13 [Nitrosomonas europaea ATCC 19718]
gi|81722177|sp|Q82UK0.1|RL13_NITEU RecName: Full=50S ribosomal protein L13
gi|30138818|emb|CAD85395.1| Ribosomal protein L13 [Nitrosomonas europaea ATCC 19718]
Length = 144
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G + E T K+ ER PT + KAV MLP+ L +KL+I+ G HP + +P
Sbjct: 80 YPGGIYETTFKKMHERFPTRPLEKAVKGMLPKGPLGYAMIKKLKIYAGDTHPHAAQQPQP 139
>gi|145219271|ref|YP_001129980.1| 50S ribosomal protein L13 [Chlorobium phaeovibrioides DSM 265]
gi|189041014|sp|A4SDB9.1|RL13_PROVI RecName: Full=50S ribosomal protein L13
gi|145205435|gb|ABP36478.1| LSU ribosomal protein L13P [Chlorobium phaeovibrioides DSM 265]
Length = 149
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+Y G +K +K+ + + P + I AV MLP N L +KL+++PG+ HP
Sbjct: 85 QYPGGVKFNHVKDLLRKKPEKVIEHAVWGMLPHNNLGRQLFKKLKVYPGATHP 137
>gi|229830209|ref|ZP_04456278.1| hypothetical protein GCWU000342_02318 [Shuttleworthia satelles DSM
14600]
gi|229791507|gb|EEP27621.1| hypothetical protein GCWU000342_02318 [Shuttleworthia satelles DSM
14600]
Length = 142
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ + + + + YR Y+G KE +L+E +E+ P I AV MLP+
Sbjct: 53 YVIVVNAEKVKVTGHKLDQKIYYRHSEYVGGFKEISLREMLEKHPERVIEHAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L + +KL ++ G +H
Sbjct: 113 PLGSEMYKKLFVYAGPDH 130
>gi|114321391|ref|YP_743074.1| 50S ribosomal protein L13 [Alkalilimnicola ehrlichii MLHE-1]
gi|118573378|sp|Q0A6F3.1|RL13_ALHEH RecName: Full=50S ribosomal protein L13
gi|114227785|gb|ABI57584.1| LSU ribosomal protein L13P [Alkalilimnicola ehrlichii MLHE-1]
Length = 142
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
YIG++K + ++ +++ P I KAV MLP+N+L +KL+++ G EH
Sbjct: 80 YIGNMKSISFEKLIDKAPERVIEKAVKGMLPKNRLGRAMIKKLKVYAGGEH 130
>gi|359686875|ref|ZP_09256876.1| 50S ribosomal protein L13 [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750938|ref|ZP_13307224.1| ribosomal protein L13 [Leptospira licerasiae str. MMD4847]
gi|418756438|ref|ZP_13312626.1| ribosomal protein L13 [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384116109|gb|EIE02366.1| ribosomal protein L13 [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404273541|gb|EJZ40861.1| ribosomal protein L13 [Leptospira licerasiae str. MMD4847]
Length = 149
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDR 84
RY G + TL+ + P + + +AV MLP++KL + RIFPG+EH G +
Sbjct: 86 RYPGGMTATTLQNMRVKQPEKILYEAVKGMLPKSKLGAEMLTHFRIFPGTEHNLGAQ 142
>gi|337286730|ref|YP_004626203.1| 50S ribosomal protein L13 [Thermodesulfatator indicus DSM 15286]
gi|335359558|gb|AEH45239.1| ribosomal protein L13 [Thermodesulfatator indicus DSM 15286]
Length = 147
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y+G +K K+ + + P E IR AV RMLP+N+L +KL+++ G HP
Sbjct: 85 YMGGIKLTPAKKMLNKKPEEVIRLAVKRMLPKNRLGRKMLKKLKVYRGETHP 136
>gi|393773624|ref|ZP_10362019.1| 50S ribosomal protein L13 [Novosphingobium sp. Rr 2-17]
gi|392720927|gb|EIZ78397.1| 50S ribosomal protein L13 [Novosphingobium sp. Rr 2-17]
Length = 159
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGD 83
Y G +KE T + + R P + KAV RM+PR L D+ R L ++ G+EHP G
Sbjct: 85 YAGGIKEVTADKVLAGRFPERVLEKAVERMVPRGPLGRDQMRALHLYAGTEHPHGG 140
>gi|357057970|ref|ZP_09118827.1| 50S ribosomal protein L13 [Selenomonas infelix ATCC 43532]
gi|355374547|gb|EHG21841.1| 50S ribosomal protein L13 [Selenomonas infelix ATCC 43532]
Length = 141
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRPLEP 88
Y G T + ++R PT I AV MLP+N L RKL ++ G EHP + EP
Sbjct: 76 YQGGTTFTTAGQMLDRFPTRVIEHAVKGMLPKNSLGAQIFRKLNVYVGPEHPHAAQKPEP 135
>gi|224824790|ref|ZP_03697897.1| ribosomal protein L13 [Pseudogulbenkiania ferrooxidans 2002]
gi|347538472|ref|YP_004845896.1| 50S ribosomal protein L13 [Pseudogulbenkiania sp. NH8B]
gi|224603283|gb|EEG09459.1| ribosomal protein L13 [Pseudogulbenkiania ferrooxidans 2002]
gi|345641649|dbj|BAK75482.1| ribosomal protein L13 [Pseudogulbenkiania sp. NH8B]
Length = 142
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KER+ E + P + KAV MLP+ L +KL+++ GSEHP
Sbjct: 80 YPGGIKERSFTELQNQFPERVLEKAVKGMLPKGPLGYAMIKKLKVYAGSEHP 131
>gi|24216108|ref|NP_713589.1| 50S ribosomal protein L13 [Leptospira interrogans serovar Lai str.
56601]
gi|45656655|ref|YP_000741.1| 50S ribosomal protein L13 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386075167|ref|YP_005989487.1| 50S ribosomal protein L13 [Leptospira interrogans serovar Lai str.
IPAV]
gi|417759024|ref|ZP_12407063.1| ribosomal protein L13 [Leptospira interrogans str. 2002000624]
gi|417767425|ref|ZP_12415366.1| ribosomal protein L13 [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417769167|ref|ZP_12417086.1| ribosomal protein L13 [Leptospira interrogans serovar Pomona str.
Pomona]
gi|417775115|ref|ZP_12422974.1| ribosomal protein L13 [Leptospira interrogans str. 2002000621]
gi|417786550|ref|ZP_12434240.1| ribosomal protein L13 [Leptospira interrogans str. C10069]
gi|418666746|ref|ZP_13228165.1| ribosomal protein L13 [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418674589|ref|ZP_13235889.1| ribosomal protein L13 [Leptospira interrogans str. 2002000623]
gi|418681588|ref|ZP_13242814.1| ribosomal protein L13 [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418691292|ref|ZP_13252391.1| ribosomal protein L13 [Leptospira interrogans str. FPW2026]
gi|418699173|ref|ZP_13260139.1| ribosomal protein L13 [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418707234|ref|ZP_13268064.1| ribosomal protein L13 [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418711716|ref|ZP_13272471.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418712268|ref|ZP_13273010.1| ribosomal protein L13 [Leptospira interrogans str. UI 08452]
gi|418723527|ref|ZP_13282366.1| ribosomal protein L13 [Leptospira interrogans str. UI 12621]
gi|418730198|ref|ZP_13288699.1| ribosomal protein L13 [Leptospira interrogans str. UI 12758]
gi|421084361|ref|ZP_15545222.1| ribosomal protein L13 [Leptospira santarosai str. HAI1594]
gi|421101293|ref|ZP_15561907.1| ribosomal protein L13 [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421117224|ref|ZP_15577592.1| ribosomal protein L13 [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421120607|ref|ZP_15580916.1| ribosomal protein L13 [Leptospira interrogans str. Brem 329]
gi|421126939|ref|ZP_15587163.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421136502|ref|ZP_15596607.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|24197350|gb|AAN50607.1| 50S ribosomal protein L13 [Leptospira interrogans serovar Lai str.
56601]
gi|45599891|gb|AAS69378.1| 50S ribosomal protein L13 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353458959|gb|AER03504.1| 50S ribosomal protein L13 [Leptospira interrogans serovar Lai str.
IPAV]
gi|400326738|gb|EJO79001.1| ribosomal protein L13 [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400350163|gb|EJP02441.1| ribosomal protein L13 [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400359470|gb|EJP15459.1| ribosomal protein L13 [Leptospira interrogans str. FPW2026]
gi|409945124|gb|EKN90702.1| ribosomal protein L13 [Leptospira interrogans str. 2002000624]
gi|409948910|gb|EKN98895.1| ribosomal protein L13 [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409950172|gb|EKO04701.1| ribosomal protein L13 [Leptospira interrogans str. C10069]
gi|409963227|gb|EKO26956.1| ribosomal protein L13 [Leptospira interrogans str. UI 12621]
gi|410011248|gb|EKO69371.1| ribosomal protein L13 [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410019390|gb|EKO86210.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410346467|gb|EKO97451.1| ribosomal protein L13 [Leptospira interrogans str. Brem 329]
gi|410369089|gb|EKP24463.1| ribosomal protein L13 [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433109|gb|EKP77459.1| ribosomal protein L13 [Leptospira santarosai str. HAI1594]
gi|410435029|gb|EKP84161.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|410575036|gb|EKQ38059.1| ribosomal protein L13 [Leptospira interrogans str. 2002000621]
gi|410578372|gb|EKQ46233.1| ribosomal protein L13 [Leptospira interrogans str. 2002000623]
gi|410757527|gb|EKR19138.1| ribosomal protein L13 [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410761755|gb|EKR27927.1| ribosomal protein L13 [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410763098|gb|EKR33835.1| ribosomal protein L13 [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410767959|gb|EKR43217.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|410774875|gb|EKR54878.1| ribosomal protein L13 [Leptospira interrogans str. UI 12758]
gi|410791194|gb|EKR84873.1| ribosomal protein L13 [Leptospira interrogans str. UI 08452]
gi|455669340|gb|EMF34471.1| ribosomal protein L13 [Leptospira interrogans serovar Pomona str.
Fox 32256]
gi|455792625|gb|EMF44373.1| ribosomal protein L13 [Leptospira interrogans serovar Lora str. TE
1992]
gi|456822551|gb|EMF71021.1| ribosomal protein L13 [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456968572|gb|EMG09755.1| ribosomal protein L13 [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
gi|456986499|gb|EMG22047.1| ribosomal protein L13 [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 149
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 86 RYPGGMTETVFKDLIAKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 137
>gi|197301591|ref|ZP_03166664.1| hypothetical protein RUMLAC_00317 [Ruminococcus lactaris ATCC
29176]
gi|197299321|gb|EDY33848.1| ribosomal protein L13 [Ruminococcus lactaris ATCC 29176]
Length = 142
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y+G ++E TL E + + P + I AV MLP+ + D +KL ++ G EH
Sbjct: 80 YVGGMRETTLAELLAKKPEKVIELAVKGMLPKGPMGRDMIKKLHVYAGPEH 130
>gi|15964996|ref|NP_385349.1| 50S ribosomal protein L13 [Sinorhizobium meliloti 1021]
gi|334315787|ref|YP_004548406.1| 50S ribosomal protein L13 [Sinorhizobium meliloti AK83]
gi|384528956|ref|YP_005713044.1| 50S ribosomal protein L13 [Sinorhizobium meliloti BL225C]
gi|384536782|ref|YP_005720867.1| 50S ribosomal protein L13 [Sinorhizobium meliloti SM11]
gi|407720188|ref|YP_006839850.1| 50S ribosomal protein L13 [Sinorhizobium meliloti Rm41]
gi|418401234|ref|ZP_12974765.1| 50S ribosomal protein L13 [Sinorhizobium meliloti CCNWSX0020]
gi|433613018|ref|YP_007189816.1| ribosomal protein L13, bacterial type [Sinorhizobium meliloti GR4]
gi|81774619|sp|Q92QR4.1|RL13_RHIME RecName: Full=50S ribosomal protein L13
gi|15074175|emb|CAC45822.1| Probable 50S ribosomal protein L13 [Sinorhizobium meliloti 1021]
gi|333811132|gb|AEG03801.1| ribosomal protein L13 [Sinorhizobium meliloti BL225C]
gi|334094781|gb|AEG52792.1| ribosomal protein L13 [Sinorhizobium meliloti AK83]
gi|336033674|gb|AEH79606.1| 50S ribosomal protein L13 [Sinorhizobium meliloti SM11]
gi|359504752|gb|EHK77283.1| 50S ribosomal protein L13 [Sinorhizobium meliloti CCNWSX0020]
gi|407318420|emb|CCM67024.1| 50S ribosomal protein L13 [Sinorhizobium meliloti Rm41]
gi|429551208|gb|AGA06217.1| ribosomal protein L13, bacterial type [Sinorhizobium meliloti GR4]
Length = 154
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P I KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|209885027|ref|YP_002288884.1| 50S ribosomal protein L13 [Oligotropha carboxidovorans OM5]
gi|337741340|ref|YP_004633068.1| 50S ribosomal protein L13 [Oligotropha carboxidovorans OM5]
gi|386030356|ref|YP_005951131.1| 50S ribosomal protein L13 [Oligotropha carboxidovorans OM4]
gi|226702887|sp|B6JGT5.1|RL13_OLICO RecName: Full=50S ribosomal protein L13
gi|209873223|gb|ACI93019.1| ribosomal protein L13 [Oligotropha carboxidovorans OM5]
gi|336095424|gb|AEI03250.1| 50S ribosomal protein L13 [Oligotropha carboxidovorans OM4]
gi|336099004|gb|AEI06827.1| 50S ribosomal protein L13 [Oligotropha carboxidovorans OM5]
Length = 154
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
+IG +KER+ K +E R P + KA+ RM+PR L + LR++ G+EHP
Sbjct: 80 FIGGIKERSAKSILEGRFPERVLEKAIERMIPRGPLGRIQMGNLRVYAGAEHP 132
>gi|149195046|ref|ZP_01872138.1| 50S ribosomal protein L13 [Caminibacter mediatlanticus TB-2]
gi|149134759|gb|EDM23243.1| 50S ribosomal protein L13 [Caminibacter mediatlanticus TB-2]
Length = 140
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 19 LNDEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
L D+ Y GH+KE T+++ ++ +P + + A MLP+ KL +KL+++ G
Sbjct: 71 LEDKYYKHTGYFGHVKEETVEKLLKNNPEKLFKLATRGMLPKTKLGRKMLKKLKVYAGEN 130
Query: 79 HP 80
HP
Sbjct: 131 HP 132
>gi|405980200|ref|ZP_11038540.1| 50S ribosomal protein L13 [Actinomyces turicensis ACS-279-V-Col4]
gi|404390652|gb|EJZ85719.1| 50S ribosomal protein L13 [Actinomyces turicensis ACS-279-V-Col4]
Length = 147
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 22 EMSVSYRYIG---HLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSE 78
E ++YR+ G L + + M + P A+ KAV MLP L + +KL ++ G+E
Sbjct: 70 EQKMAYRHSGRPGGLTATSYRNLMAKSPERAVEKAVRGMLPHTSLGRMQFKKLHVYAGAE 129
Query: 79 HPFGDRPLEPY 89
HP + PY
Sbjct: 130 HPHAGQSPVPY 140
>gi|222530038|ref|YP_002573920.1| 50S ribosomal protein L13 [Caldicellulosiruptor bescii DSM 6725]
gi|302872467|ref|YP_003841103.1| 50S ribosomal protein L13 [Caldicellulosiruptor obsidiansis OB47]
gi|312126918|ref|YP_003991792.1| 50S ribosomal protein L13 [Caldicellulosiruptor hydrothermalis 108]
gi|312621687|ref|YP_004023300.1| 50S ribosomal protein L13 [Caldicellulosiruptor kronotskyensis
2002]
gi|312792731|ref|YP_004025654.1| 50S ribosomal protein L13 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|254798475|sp|B9MLF7.1|RL13_ANATD RecName: Full=50S ribosomal protein L13
gi|222456885|gb|ACM61147.1| ribosomal protein L13 [Caldicellulosiruptor bescii DSM 6725]
gi|302575326|gb|ADL43117.1| ribosomal protein L13 [Caldicellulosiruptor obsidiansis OB47]
gi|311776937|gb|ADQ06423.1| ribosomal protein L13 [Caldicellulosiruptor hydrothermalis 108]
gi|312179871|gb|ADQ40041.1| ribosomal protein L13 [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312202154|gb|ADQ45481.1| ribosomal protein L13 [Caldicellulosiruptor kronotskyensis 2002]
Length = 142
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 21 DEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
D +Y G LK + +E+ P +AI AV MLP+N+LRD RKL+++ G HP
Sbjct: 72 DGYRYHTKYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNRLRDRFMRKLKVYRGPNHP 131
>gi|83952140|ref|ZP_00960872.1| 50S ribosomal protein L13 [Roseovarius nubinhibens ISM]
gi|83837146|gb|EAP76443.1| 50S ribosomal protein L13 [Roseovarius nubinhibens ISM]
Length = 153
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 7 VFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMER-DPTEAIRKAVLRMLPRNK 62
V I + L+ N +Y + GH +K RT E +E P + +AV RMLP N+
Sbjct: 54 VIVINADKVQLTGNKREKPNYWHTGHPGGIKSRTTGEILEGAHPERVVMQAVKRMLPGNR 113
Query: 63 LRDDRDRKLRIFPGSEHPF 81
L + LR++ G+EHP
Sbjct: 114 LSRQQMTNLRVYAGTEHPH 132
>gi|329298215|ref|ZP_08255551.1| 50S ribosomal protein L13 [Plautia stali symbiont]
Length = 142
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 13/78 (16%)
Query: 15 FILSLN-DEMSVS---------YRYIGHL---KERTLKEQMERDPTEAIRKAVLRMLPRN 61
+I+ LN D+++V+ Y + GH+ K+ T E +ER P I AV MLP+
Sbjct: 53 YIIVLNADKVAVTGNKRNDKIYYHHTGHIGGIKQATFAEMIERRPERVIEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEH 79
L RKL+++ G+EH
Sbjct: 113 PLGRAMYRKLKVYAGNEH 130
>gi|237753442|ref|ZP_04583922.1| ribosomal protein L13 [Helicobacter winghamensis ATCC BAA-430]
gi|229375709|gb|EEO25800.1| ribosomal protein L13 [Helicobacter winghamensis ATCC BAA-430]
Length = 139
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G K +TLKE +E+ P + + AV MLP+ KL +KL+++ + HP
Sbjct: 81 YFGSTKSKTLKEMLEKHPEKLYKLAVRGMLPKTKLGRAMLKKLKVYCDANHP 132
>gi|225621084|ref|YP_002722342.1| 50S ribosomal protein L13 [Brachyspira hyodysenteriae WA1]
gi|225215904|gb|ACN84638.1| 50S ribosomal protein L13 [Brachyspira hyodysenteriae WA1]
Length = 154
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 YVVFFILRNLFILSLNDEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
YV+ +++ + + + YR+ G+ +K + E +E++P ++ AV ML N
Sbjct: 65 YVIIINAKDIVLTGNKKKGKIHYRHTGYPGGIKAISYGELLEKNPERMVKIAVKGMLSHN 124
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+++ GSEHP
Sbjct: 125 PLGRLHLKKLKVYAGSEHP 143
>gi|86140804|ref|ZP_01059363.1| 50S ribosomal protein L13 [Leeuwenhoekiella blandensis MED217]
gi|85832746|gb|EAQ51195.1| 50S ribosomal protein L13 [Leeuwenhoekiella blandensis MED217]
Length = 151
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T KE +DP + AV MLP+NKL R L+++ G+EH
Sbjct: 85 YPGGQRSLTAKELYSKDPARLVENAVKGMLPKNKLGSAIYRNLKVYAGAEH 135
>gi|221053033|ref|XP_002257891.1| ribosomal protein L13 [Plasmodium knowlesi strain H]
gi|193807723|emb|CAQ38427.1| Ribosomal protein L13, putative [Plasmodium knowlesi strain H]
Length = 212
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 37 TLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHPFGDRP 85
T K ++P+ + AV RMLP N+LR RKL ++PG+ HP P
Sbjct: 140 TCKTVFAKNPSMILNLAVKRMLPNNRLRQLYYRKLFVYPGAIHPHWGIP 188
>gi|146296364|ref|YP_001180135.1| 50S ribosomal protein L13 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166230973|sp|A4XJ59.1|RL13_CALS8 RecName: Full=50S ribosomal protein L13
gi|145409940|gb|ABP66944.1| ribosomal protein L13 [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 142
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 21 DEMSVSYRYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
D +Y G LK + +E+ P +AI AV MLP+N+LRD RKL+++ G HP
Sbjct: 72 DGYRYHTKYPGGLKFIPYRRLLEKHPEKAIEIAVRGMLPKNRLRDRFMRKLKVYRGPNHP 131
>gi|422349855|ref|ZP_16430743.1| 50S ribosomal protein L13 [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657704|gb|EKB30586.1| 50S ribosomal protein L13 [Sutterella wadsworthensis 2_1_59BFAA]
Length = 142
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 8 FFILRNLFILSLN---DEMSVSYRYIGH---LKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F ++ N L L+ D YR+ G+ + E T +E ++ P A+ AV MLP+
Sbjct: 53 FIVVINADKLKLSAEKDTKKTYYRHTGYPGGIYETTFREMQDKHPGRALEIAVKGMLPKG 112
Query: 62 KLRDDRDRKLRIFPGSEHP 80
L +KL+I+ G+EHP
Sbjct: 113 PLGYAMIKKLKIYAGAEHP 131
>gi|403738760|ref|ZP_10951361.1| 50S ribosomal protein L13 [Austwickia chelonae NBRC 105200]
gi|403191410|dbj|GAB78131.1| 50S ribosomal protein L13 [Austwickia chelonae NBRC 105200]
Length = 147
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G L+ + E M + P A+ KA+ MLP+N L + KL+++ G HP
Sbjct: 80 YPGGLRSTSYTELMAKSPERAVEKAIRGMLPKNSLARQQLSKLKVYAGDAHP 131
>gi|299820991|ref|ZP_07052880.1| 50S ribosomal protein L13 [Listeria grayi DSM 20601]
gi|299818012|gb|EFI85247.1| 50S ribosomal protein L13 [Listeria grayi DSM 20601]
Length = 145
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 8 FFILRNLFILSLNDEMS---VSYR---YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRN 61
F I+ N + L + + + YR Y G LK RT E +P + I +V MLP+N
Sbjct: 54 FVIVINAGKVGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLIELSVKGMLPKN 113
Query: 62 KLRDDRDRKLRIFPGSEH 79
L + +KL ++ GSEH
Sbjct: 114 SLGRAQFKKLHVYGGSEH 131
>gi|150396085|ref|YP_001326552.1| 50S ribosomal protein L13 [Sinorhizobium medicae WSM419]
gi|166199622|sp|A6U7T7.1|RL13_SINMW RecName: Full=50S ribosomal protein L13
gi|150027600|gb|ABR59717.1| ribosomal protein L13 [Sinorhizobium medicae WSM419]
Length = 154
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT ++ +E R P I KAV RM+PR L + + LR++ GS HP
Sbjct: 80 YPGGIKERTARQIIEGRFPERVIEKAVERMVPRGPLGRRQMKNLRVYAGSNHP 132
>gi|325292617|ref|YP_004278481.1| 50S ribosomal protein L13 [Agrobacterium sp. H13-3]
gi|418406770|ref|ZP_12980089.1| 50S ribosomal protein L13 [Agrobacterium tumefaciens 5A]
gi|325060470|gb|ADY64161.1| 50S ribosomal protein L13 [Agrobacterium sp. H13-3]
gi|358007263|gb|EHJ99586.1| 50S ribosomal protein L13 [Agrobacterium tumefaciens 5A]
Length = 154
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 27 YRYIGH---LKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y + GH +KERT ++ +E R P + KAV RM+PR L + + LR++ GS HP
Sbjct: 75 YWHTGHPGGIKERTARQIIEGRFPERVVEKAVERMIPRGPLGRRQMKNLRVYAGSNHP 132
>gi|372221637|ref|ZP_09500058.1| 50S ribosomal protein L13 [Mesoflavibacter zeaxanthinifaciens S86]
Length = 151
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 29 YIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
Y G + T E +E+ P I K+V MLP+NKL D R L+++ G+EH
Sbjct: 85 YPGGQRSTTATELLEKYPERLIEKSVKGMLPKNKLGADLFRNLKVYAGAEH 135
>gi|410942634|ref|ZP_11374409.1| ribosomal protein L13 [Leptospira noguchii str. 2006001870]
gi|410782272|gb|EKR71288.1| ribosomal protein L13 [Leptospira noguchii str. 2006001870]
Length = 149
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 28 RYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEH 79
RY G + E K+ + + P + I +AV MLP++KL D +IF G+EH
Sbjct: 86 RYPGGMTETIFKDLISKQPEKVIYEAVKGMLPKSKLGDKMLTHCKIFSGAEH 137
>gi|344923067|ref|ZP_08776528.1| 50S ribosomal protein L13 [Candidatus Odyssella thessalonicensis
L13]
Length = 154
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 29 YIGHLKERTLKEQME-RDPTEAIRKAVLRMLPRNKLRDDRDRKLRIFPGSEHP 80
Y G +KERT+ + ++ + P I+KAV RM+PR L LR++ G+EHP
Sbjct: 80 YAGGIKERTIGQIIKGKHPERVIQKAVERMVPRGPLGRQIMSNLRVYAGAEHP 132
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,972,734,163
Number of Sequences: 23463169
Number of extensions: 76688658
Number of successful extensions: 300751
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 298079
Number of HSP's gapped (non-prelim): 2828
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)