BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032583
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425511|ref|XP_002266305.1| PREDICTED: uncharacterized protein At4g28440 isoform 2 [Vitis
vinifera]
gi|225425513|ref|XP_002266183.1| PREDICTED: uncharacterized protein At4g28440 isoform 1 [Vitis
vinifera]
gi|297739026|emb|CBI28515.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/137 (91%), Positives = 134/137 (97%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAESKSGLRKPVFTK++QLRPGTSGHTLTVKVVS+KMVLQKGR DG QVRQMRIAECLVG
Sbjct: 1 MAESKSGLRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDLMKEG+TV+LRNAKIDMFKGSMRLAVDKWGRVEV EPA+F+VKE
Sbjct: 61 DETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVVEE
Sbjct: 121 DNNLSLVEYELVNVVEE 137
>gi|449450468|ref|XP_004142984.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
gi|449519030|ref|XP_004166538.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
Length = 137
Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/137 (92%), Positives = 130/137 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAESK GLRKPVFTKVDQLRPGTSGHTLTVKVV+TKMVLQKGR DG Q RQMRIAECLVG
Sbjct: 1 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDLMKEG T+ LRNAKIDMFKGSMRLAVD+WGRVEV EPANFTVKE
Sbjct: 61 DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137
>gi|147823253|emb|CAN66341.1| hypothetical protein VITISV_018558 [Vitis vinifera]
Length = 137
Score = 262 bits (669), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/137 (91%), Positives = 133/137 (97%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAESKSGLRKPVFTK++QLRPGT GHTLTVKVVS+KMVLQKGR DG QVRQMRIAECLVG
Sbjct: 1 MAESKSGLRKPVFTKIEQLRPGTXGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDLMKEG+TV+LRNAKIDMFKGSMRLAVDKWGRVEV EPA+F+VKE
Sbjct: 61 DETGMIIFTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVVEE
Sbjct: 121 DNNLSLVEYELVNVVEE 137
>gi|225452474|ref|XP_002278536.1| PREDICTED: uncharacterized protein At4g28440 [Vitis vinifera]
Length = 137
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/137 (91%), Positives = 131/137 (95%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+K G+RKPVFTKVDQLRPGTSGHTLTVKVVS+KMVLQKGR DG QVRQMRIAECLVG
Sbjct: 1 MAEAKPGMRKPVFTKVDQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMI+FTARNDQVDLMK TTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVKE
Sbjct: 61 DETGMIVFTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVVEE
Sbjct: 121 DNNLSLVEYELVNVVEE 137
>gi|224107831|ref|XP_002314618.1| predicted protein [Populus trichocarpa]
gi|222863658|gb|EEF00789.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/137 (91%), Positives = 131/137 (95%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAESK GLRKPVFTKV+QLRPGT GHTLTVKVVS KMVLQKGR DG QVRQM+IAECLVG
Sbjct: 1 MAESKPGLRKPVFTKVEQLRPGTGGHTLTVKVVSAKMVLQKGRADGPQVRQMKIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG+IIFTARNDQVDLM+EGTTVILRNAKIDMFKGSMRLAVD+WGRVEV EPA+FTVKE
Sbjct: 61 DETGLIIFTARNDQVDLMQEGTTVILRNAKIDMFKGSMRLAVDRWGRVEVTEPADFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137
>gi|255568818|ref|XP_002525380.1| conserved hypothetical protein [Ricinus communis]
gi|223535343|gb|EEF37018.1| conserved hypothetical protein [Ricinus communis]
Length = 136
Score = 258 bits (660), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/137 (92%), Positives = 132/137 (96%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+K GLRKPVFTKV+QLRPGTSGHTLTVKVVSTKMVLQKGR DG Q+RQMRIAECLVG
Sbjct: 1 MAENK-GLRKPVFTKVEQLRPGTSGHTLTVKVVSTKMVLQKGRADGPQIRQMRIAECLVG 59
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDLMKEG+TV LRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVKE
Sbjct: 60 DETGMIIFTARNDQVDLMKEGSTVTLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 119
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVVEE
Sbjct: 120 DNNLSLIEYELVNVVEE 136
>gi|388501582|gb|AFK38857.1| unknown [Lotus japonicus]
Length = 136
Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/136 (89%), Positives = 132/136 (97%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+SK GLRKPVFTKVDQLRPGTSGHTLT+KVV+TKMV+QKGR DG Q RQMR+AECLVG
Sbjct: 1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTLKVVNTKMVVQKGRADGAQSRQMRLAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDLMKEG+TV++RNAKIDM+KGSMRLAVDKWGRVEVAEPA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDLMKEGSTVVMRNAKIDMYKGSMRLAVDKWGRVEVAEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSLIEYELVNVVE
Sbjct: 121 DNNLSLIEYELVNVVE 136
>gi|351723755|ref|NP_001237290.1| uncharacterized protein LOC100499877 [Glycine max]
gi|255627337|gb|ACU14013.1| unknown [Glycine max]
Length = 137
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 129/137 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+SK+GLRKPVFTKVDQLRPGTSGHTLTVKVV+ KMV+QKGR DG Q RQMRIAECLVG
Sbjct: 1 MADSKAGLRKPVFTKVDQLRPGTSGHTLTVKVVNAKMVMQKGRSDGPQSRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVD+MKE TVILRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDMMKEAATVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVVE 137
>gi|346469991|gb|AEO34840.1| hypothetical protein [Amblyomma maculatum]
Length = 137
Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/137 (90%), Positives = 130/137 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAES+SGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR DG QVRQMRIAECLVG
Sbjct: 1 MAESQSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRPDGPQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DET +I+FTARN+QVDLMK GTTVILRNAKIDMFKGSMRLAVDKWGRVE + A+FTVKE
Sbjct: 61 DETAIIVFTARNEQVDLMKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEPTDAADFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137
>gi|224100179|ref|XP_002311776.1| predicted protein [Populus trichocarpa]
gi|118484454|gb|ABK94103.1| unknown [Populus trichocarpa]
gi|118487681|gb|ABK95665.1| unknown [Populus trichocarpa]
gi|222851596|gb|EEE89143.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 124/135 (91%), Positives = 128/135 (94%)
Query: 3 ESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDE 62
ESK GLRKPVFTKV+QLRPGT GHTLTVKVVS KMVLQKGR DG QVRQMRIAECLVGDE
Sbjct: 4 ESKPGLRKPVFTKVEQLRPGTFGHTLTVKVVSVKMVLQKGRADGPQVRQMRIAECLVGDE 63
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG+IIFTARNDQVDLMKE +TVILRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVKEDN
Sbjct: 64 TGLIIFTARNDQVDLMKEDSTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPADFTVKEDN 123
Query: 123 NLSLIEYELVNVVEE 137
NLSLIEYELVNVVEE
Sbjct: 124 NLSLIEYELVNVVEE 138
>gi|351726836|ref|NP_001236884.1| uncharacterized protein LOC100526985 [Glycine max]
gi|255631308|gb|ACU16021.1| unknown [Glycine max]
Length = 137
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/137 (89%), Positives = 126/137 (91%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+SK GLRKPVFTKVDQLRPGTSGHTLTVKVV KMV+QKGR DG Q RQMRIAECLVG
Sbjct: 1 MADSKPGLRKPVFTKVDQLRPGTSGHTLTVKVVDAKMVMQKGRSDGPQSRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVD+MKEG TV LRNAKIDMFKGSMRLA DKWGRVEV EPA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDMMKEGATVTLRNAKIDMFKGSMRLAADKWGRVEVTEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVVE 137
>gi|71534906|gb|AAZ32857.1| unknown [Medicago sativa]
Length = 164
Score = 251 bits (641), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/136 (88%), Positives = 129/136 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+K GLRKP FTKVDQLRPGTSGHTLTVKVV+TKMV+QKGR DG Q RQMRIAE LVG
Sbjct: 29 MAEAKPGLRKPTFTKVDQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVG 88
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDL+K+G+T+ILRNAKIDMFKGSMRLAVDKWGRVEV +PA+FTVKE
Sbjct: 89 DETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKE 148
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSLIEYELVNVVE
Sbjct: 149 DNNLSLIEYELVNVVE 164
>gi|351724629|ref|NP_001237576.1| uncharacterized protein LOC100500151 [Glycine max]
gi|255629472|gb|ACU15082.1| unknown [Glycine max]
Length = 137
Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/137 (88%), Positives = 127/137 (92%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+SKSGLRKPVFTKVDQL PGTSGHTLTVKVV+ KMV+Q+GR DG Q RQMRIAECLVG
Sbjct: 1 MADSKSGLRKPVFTKVDQLCPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVD M EG TVILRNAKIDMFKGSMRLAVDKWGRVE+ EPA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDTMTEGATVILRNAKIDMFKGSMRLAVDKWGRVELTEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVAE 137
>gi|351723299|ref|NP_001237018.1| uncharacterized protein LOC100499859 [Glycine max]
gi|255627185|gb|ACU13937.1| unknown [Glycine max]
Length = 137
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/137 (87%), Positives = 127/137 (92%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+SKSGLRKPVF KVDQLRPGTSGHTLTVKVV+ KMV+Q+GR DG Q RQM+IAECLVG
Sbjct: 1 MADSKSGLRKPVFIKVDQLRPGTSGHTLTVKVVNAKMVMQRGRSDGPQSRQMQIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVD M EG TVILRNAKIDMFKGSMRLAVDKWGRVE+ EPA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDTMTEGATVILRNAKIDMFKGSMRLAVDKWGRVELTEPASFTVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSLIEYELVNVV E
Sbjct: 121 DNNLSLIEYELVNVVVE 137
>gi|217073672|gb|ACJ85196.1| unknown [Medicago truncatula]
gi|388513593|gb|AFK44858.1| unknown [Medicago truncatula]
Length = 136
Score = 248 bits (634), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/136 (87%), Positives = 129/136 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+K GLRKP FTKV+QLRPGTSGHTLTVKVV+TKMV+QKGR DG Q RQMRIAE LVG
Sbjct: 1 MAEAKPGLRKPTFTKVEQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETGMIIFTARNDQVDL+K+G+T+ILRNAKIDMFKGSMRLAVDKWGRVEV +PA+FTVKE
Sbjct: 61 DETGMIIFTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKE 120
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSLIEYELVNVVE
Sbjct: 121 DNNLSLIEYELVNVVE 136
>gi|116788622|gb|ABK24943.1| unknown [Picea sitchensis]
Length = 137
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/137 (86%), Positives = 130/137 (94%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+K G+RKPVFTKVDQLRPGTSGHTLTVKVV+ KMVLQKGR DG+QVRQMRIAECLVG
Sbjct: 1 MAEAKPGMRKPVFTKVDQLRPGTSGHTLTVKVVTAKMVLQKGRPDGSQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG+I+FTARN+QVDL+K G+TVILRNAKIDMF+GSMRLAVDKWGRVEV E A+F VKE
Sbjct: 61 DETGVIVFTARNEQVDLVKAGSTVILRNAKIDMFRGSMRLAVDKWGRVEVTEDADFEVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVVEE
Sbjct: 121 DNNLSLVEYELVNVVEE 137
>gi|403318295|gb|AFR36911.1| hypothetical protein [Camellia sinensis]
Length = 137
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/137 (85%), Positives = 125/137 (91%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+KS +RKPVFTKVDQLRPGT GH L +KVVS+K VLQKGR DG QVRQMRIAECLVG
Sbjct: 1 MAETKSSMRKPVFTKVDQLRPGTGGHNLILKVVSSKTVLQKGRPDGPQVRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG I+FTARNDQVDLMK TVILRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVK+
Sbjct: 61 DETGTIVFTARNDQVDLMKPDGTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKD 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVVEE
Sbjct: 121 DNNLSLVEYELVNVVEE 137
>gi|18395285|ref|NP_564202.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
gi|4056457|gb|AAC98030.1| ESTs gb|234051 and gb|F13722 come from this gene [Arabidopsis
thaliana]
gi|21553633|gb|AAM62726.1| unknown [Arabidopsis thaliana]
gi|27754651|gb|AAO22770.1| unknown protein [Arabidopsis thaliana]
gi|28394047|gb|AAO42431.1| unknown protein [Arabidopsis thaliana]
gi|332192307|gb|AEE30428.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
Length = 137
Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 112/137 (81%), Positives = 126/137 (91%), Gaps = 1/137 (0%)
Query: 1 MAES-KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLV 59
MA+S K+GL+KP FTKVDQLRPGTSGH + VK+VSTKMVLQKGR DG Q RQ+RI+EC+V
Sbjct: 1 MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60
Query: 60 GDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVK 119
GDETG+I+FTARNDQVDLMKEG+TV LRNAKIDM+KGSMRLAVDKWGRVEV EPA+F VK
Sbjct: 61 GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120
Query: 120 EDNNLSLIEYELVNVVE 136
ED N+SLIEYELVNVVE
Sbjct: 121 EDTNMSLIEYELVNVVE 137
>gi|168059421|ref|XP_001781701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666870|gb|EDQ53514.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/137 (81%), Positives = 123/137 (89%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA LRKPVF KVDQLRPGT+GHTLTVKVVSTK+VLQK R DG QVRQ+RIAECLVG
Sbjct: 1 MASPNPSLRKPVFVKVDQLRPGTAGHTLTVKVVSTKLVLQKARPDGNQVRQVRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
D+TG+I+FTARNDQVDLMKEG TVILRNAKIDMFKGSMRLAVDKWGRVE+ E A+F VKE
Sbjct: 61 DDTGVIVFTARNDQVDLMKEGVTVILRNAKIDMFKGSMRLAVDKWGRVELTEAADFVVKE 120
Query: 121 DNNLSLIEYELVNVVEE 137
DNN SL+EYELVNV++E
Sbjct: 121 DNNFSLVEYELVNVIDE 137
>gi|297845424|ref|XP_002890593.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336435|gb|EFH66852.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 137
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/133 (81%), Positives = 123/133 (92%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDET 63
+K+GL+KP FTKVDQLRPGTSGH + VK+VSTKMVLQKGR DG Q RQ+RI+EC+VGDET
Sbjct: 5 AKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDET 64
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G+I+FTARNDQVDLMKEG+TV LRNAKIDM+KGSMRLAVDKWGRVEV EPA+F VKED N
Sbjct: 65 GVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTN 124
Query: 124 LSLIEYELVNVVE 136
+SLIEYELVNVVE
Sbjct: 125 MSLIEYELVNVVE 137
>gi|116778850|gb|ABK21025.1| unknown [Picea sitchensis]
gi|224284499|gb|ACN39983.1| unknown [Picea sitchensis]
Length = 140
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/136 (79%), Positives = 123/136 (90%), Gaps = 1/136 (0%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
+ + LRKPVFTK+DQLRPGTSGH L VKV S K+VLQKGR D +QVRQMRIAECL+GD
Sbjct: 6 SNPNANLRKPVFTKIDQLRPGTSGHNLIVKVTSAKIVLQKGRPD-SQVRQMRIAECLIGD 64
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ETG++IFTARN+QVDLMKEG+TVILRNAKIDMFKGSMRLAVDKWGR+EV EPA F+VKE+
Sbjct: 65 ETGIVIFTARNEQVDLMKEGSTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAEFSVKEE 124
Query: 122 NNLSLIEYELVNVVEE 137
NNLSL+EYELVNV E+
Sbjct: 125 NNLSLVEYELVNVQED 140
>gi|302781869|ref|XP_002972708.1| hypothetical protein SELMODRAFT_97896 [Selaginella moellendorffii]
gi|302812803|ref|XP_002988088.1| hypothetical protein SELMODRAFT_159151 [Selaginella moellendorffii]
gi|300144194|gb|EFJ10880.1| hypothetical protein SELMODRAFT_159151 [Selaginella moellendorffii]
gi|300159309|gb|EFJ25929.1| hypothetical protein SELMODRAFT_97896 [Selaginella moellendorffii]
Length = 135
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 125/137 (91%), Gaps = 3/137 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE LRKPVF KVDQLRPGT+GHTL VKV+S+K+VLQK R DG+QVRQMRIAEC+VG
Sbjct: 1 MAEP---LRKPVFGKVDQLRPGTNGHTLVVKVLSSKLVLQKPRPDGSQVRQMRIAECIVG 57
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG+I+F ARN+QVD +KEGTT+I+RNAKIDMFKGSMRLAVDKWGR+EV +PA+F VKE
Sbjct: 58 DETGVIVFAARNEQVDQVKEGTTIIIRNAKIDMFKGSMRLAVDKWGRIEVTDPADFVVKE 117
Query: 121 DNNLSLIEYELVNVVEE 137
DNNLSL+EYELVNVV+E
Sbjct: 118 DNNLSLVEYELVNVVDE 134
>gi|168042774|ref|XP_001773862.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674849|gb|EDQ61352.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/138 (79%), Positives = 122/138 (88%), Gaps = 1/138 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA + LRKPVF KVDQLRPGTSGHTLTVKVVS+K+VLQK R DG QVRQ+RIAECLVG
Sbjct: 1 MAAPATNLRKPVFVKVDQLRPGTSGHTLTVKVVSSKLVLQKARPDGNQVRQVRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA-NFTVK 119
DETG+I+FTARN+QVDLMKEG +ILRNAKIDMFKGSMRLAVDKWGRVE A A +F VK
Sbjct: 61 DETGVIVFTARNEQVDLMKEGMKLILRNAKIDMFKGSMRLAVDKWGRVEPAPDAEDFVVK 120
Query: 120 EDNNLSLIEYELVNVVEE 137
EDNN SL+EYELVNV++E
Sbjct: 121 EDNNFSLVEYELVNVIDE 138
>gi|294462998|gb|ADE77037.1| unknown [Picea sitchensis]
Length = 138
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/135 (75%), Positives = 124/135 (91%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A +K+ L+KPVF KV++L+PGT+GHTL VKVVS+ MVLQ+ R +GTQVRQ+RIAEC+VGD
Sbjct: 4 ATAKTSLKKPVFVKVNELQPGTTGHTLVVKVVSSNMVLQRARPNGTQVRQIRIAECVVGD 63
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
+TG+I FTARN+QVD+MKEG T+I+RNA+IDMFKG+MRLAVDKWGR+EV EPANFTVKED
Sbjct: 64 DTGIITFTARNEQVDIMKEGATLIIRNARIDMFKGTMRLAVDKWGRIEVTEPANFTVKED 123
Query: 122 NNLSLIEYELVNVVE 136
NNLS +EYELVNVVE
Sbjct: 124 NNLSAVEYELVNVVE 138
>gi|302143333|emb|CBI21894.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 113/129 (87%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RKPVFTKVDQL+PGT GHTLTVKVVS+K VLQKGR +R RIAECLVGDETG IIF
Sbjct: 20 RKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLRHTRIAECLVGDETGAIIF 79
Query: 69 TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
TARNDQVD+MK G TVILRNAKIDMFKGSMRLAVDKWGRVEV E ANF VKE NNLSL+E
Sbjct: 80 TARNDQVDMMKAGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEDANFVVKEQNNLSLVE 139
Query: 129 YELVNVVEE 137
YELVNV+EE
Sbjct: 140 YELVNVLEE 148
>gi|225446441|ref|XP_002276699.1| PREDICTED: uncharacterized protein At4g28440-like [Vitis vinifera]
Length = 166
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 113/129 (87%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RKPVFTKVDQL+PGT GHTLTVKVVS+K VLQKGR +R RIAECLVGDETG IIF
Sbjct: 38 RKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLRHTRIAECLVGDETGAIIF 97
Query: 69 TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
TARNDQVD+MK G TVILRNAKIDMFKGSMRLAVDKWGRVEV E ANF VKE NNLSL+E
Sbjct: 98 TARNDQVDMMKAGATVILRNAKIDMFKGSMRLAVDKWGRVEVTEDANFVVKEQNNLSLVE 157
Query: 129 YELVNVVEE 137
YELVNV+EE
Sbjct: 158 YELVNVLEE 166
>gi|449456613|ref|XP_004146043.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
gi|449520479|ref|XP_004167261.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
Length = 154
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 117/136 (86%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A + GLRKPVF K++QL+PGT+GHTL VKVVS+ VLQKGR +RQ RIAECLVGD
Sbjct: 19 AAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGD 78
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ETG I+FTARNDQVD +K GTT+ILRNAKIDMFKGSMRLAVDKWGR+E+A+P +F VKED
Sbjct: 79 ETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELADPEDFVVKED 138
Query: 122 NNLSLIEYELVNVVEE 137
NNLSL+EYELVNV EE
Sbjct: 139 NNLSLVEYELVNVAEE 154
>gi|18391179|ref|NP_563874.1| replication factor A1 [Arabidopsis thaliana]
gi|30681796|ref|NP_849632.1| replication factor A1 [Arabidopsis thaliana]
gi|14335100|gb|AAK59829.1| At1g10590/F20B24_1 [Arabidopsis thaliana]
gi|15027865|gb|AAK76463.1| unknown protein [Arabidopsis thaliana]
gi|21281077|gb|AAM44909.1| unknown protein [Arabidopsis thaliana]
gi|332190482|gb|AEE28603.1| replication factor A1 [Arabidopsis thaliana]
gi|332190484|gb|AEE28605.1| replication factor A1 [Arabidopsis thaliana]
Length = 139
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 123/137 (89%), Gaps = 3/137 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD--GTQVRQMRIAECL 58
MAE+ S LRKPVFTKV++LRPGT+GH+L VKVV+TKMV+Q+G G G Q RQMRIAECL
Sbjct: 1 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 60
Query: 59 VGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFT 117
VGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KGSMRLAVD+WGRVEVA EP + T
Sbjct: 61 VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 120
Query: 118 VKEDNNLSLIEYELVNV 134
VK+DNNLSLIEYELV+V
Sbjct: 121 VKDDNNLSLIEYELVSV 137
>gi|30681801|ref|NP_849633.1| replication factor A1 [Arabidopsis thaliana]
gi|5091555|gb|AAD39584.1|AC007067_24 T10O24.24 [Arabidopsis thaliana]
gi|332190483|gb|AEE28604.1| replication factor A1 [Arabidopsis thaliana]
Length = 153
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 123/137 (89%), Gaps = 3/137 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD--GTQVRQMRIAECL 58
MAE+ S LRKPVFTKV++LRPGT+GH+L VKVV+TKMV+Q+G G G Q RQMRIAECL
Sbjct: 15 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 74
Query: 59 VGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFT 117
VGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KGSMRLAVD+WGRVEVA EP + T
Sbjct: 75 VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 134
Query: 118 VKEDNNLSLIEYELVNV 134
VK+DNNLSLIEYELV+V
Sbjct: 135 VKDDNNLSLIEYELVSV 151
>gi|118481894|gb|ABK92882.1| unknown [Populus trichocarpa]
Length = 155
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 108/135 (80%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD-GTQVRQMRIAECLVGDE 62
+K GLRKPVF KVDQL+PGT GHTLTVKV++ V QK R VRQ RIAECL+GDE
Sbjct: 21 AKPGLRKPVFIKVDQLKPGTGGHTLTVKVLNFNTVPQKDRRSVSLHVRQTRIAECLIGDE 80
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG IIFTARNDQVDLMK GTTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA F VKEDN
Sbjct: 81 TGTIIFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFVVKEDN 140
Query: 123 NLSLIEYELVNVVEE 137
NLSL+EYELVNV EE
Sbjct: 141 NLSLVEYELVNVAEE 155
>gi|224117112|ref|XP_002317479.1| predicted protein [Populus trichocarpa]
gi|222860544|gb|EEE98091.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/135 (79%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD-GTQVRQMRIAECLVGDE 62
+K GLRKPVF KVDQL+PGT GHTLTVKV++ V QK R RQ RIAECL+GDE
Sbjct: 21 AKPGLRKPVFIKVDQLKPGTGGHTLTVKVLNFNTVPQKDRRSVSLHARQTRIAECLIGDE 80
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG IIFTARNDQVDLMK GTTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA F VKEDN
Sbjct: 81 TGTIIFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFVVKEDN 140
Query: 123 NLSLIEYELVNVVEE 137
NLSL+EYELVNV EE
Sbjct: 141 NLSLVEYELVNVAEE 155
>gi|118484382|gb|ABK94068.1| unknown [Populus trichocarpa]
Length = 153
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/136 (77%), Positives = 115/136 (84%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A K GLRKPVFTKVD L+PGT GHTLTVKV+++ VL KGR +RQ RIAECL+GD
Sbjct: 18 AGGKPGLRKPVFTKVDLLKPGTGGHTLTVKVLNSIAVLPKGRSVSHHLRQSRIAECLIGD 77
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
+TG IIFTARN+QVDL+K GTTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA F VKED
Sbjct: 78 DTGSIIFTARNEQVDLVKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFVVKED 137
Query: 122 NNLSLIEYELVNVVEE 137
NNLSL+EYELVNV E
Sbjct: 138 NNLSLVEYELVNVTGE 153
>gi|224128240|ref|XP_002329115.1| predicted protein [Populus trichocarpa]
gi|222869784|gb|EEF06915.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/133 (78%), Positives = 114/133 (85%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A K GLRKPVFTKVD L+PGT GHTLTVKV+++ VL KGR +RQ RIAECL+GD
Sbjct: 1 AGGKPGLRKPVFTKVDLLKPGTGGHTLTVKVLNSIAVLPKGRSVSHHLRQSRIAECLIGD 60
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
+TG IIFTARN+QVDL+K GTTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA F VKED
Sbjct: 61 DTGSIIFTARNEQVDLVKPGTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPAEFVVKED 120
Query: 122 NNLSLIEYELVNV 134
NNLSL+EYELVNV
Sbjct: 121 NNLSLVEYELVNV 133
>gi|388520195|gb|AFK48159.1| unknown [Medicago truncatula]
Length = 135
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 115/135 (85%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
M +SK LRKPVF KVDQL PGT GHT+ VKVVS K+V Q R DG ++R MR+AECLVG
Sbjct: 1 MPDSKPALRKPVFCKVDQLLPGTRGHTIIVKVVSVKLVDQNDRPDGLKLRHMRMAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG IIFTAR++QVDLM EG+T+I+RNAKIDMFKG+MRL VD WGR+E+ EPA FTVKE
Sbjct: 61 DETGTIIFTARHEQVDLMTEGSTIIVRNAKIDMFKGTMRLGVDVWGRIELTEPAAFTVKE 120
Query: 121 DNNLSLIEYELVNVV 135
DNNLSLIEYELVNVV
Sbjct: 121 DNNLSLIEYELVNVV 135
>gi|147774548|emb|CAN61280.1| hypothetical protein VITISV_018007 [Vitis vinifera]
Length = 130
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 110/130 (84%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
+RK VFTKVDQL+PGT GHTLTVKVVS+K VLQ GR +R RIAECLVGDETG II
Sbjct: 1 MRKSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGRSVSQHLRHTRIAECLVGDETGAII 60
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
FTARNDQVD+MK GTTVIL AKIDMFKGSMRL +DKWGRVEV E ANF VKE NNLSL+
Sbjct: 61 FTARNDQVDMMKPGTTVILHKAKIDMFKGSMRLVIDKWGRVEVTEDANFVVKEQNNLSLV 120
Query: 128 EYELVNVVEE 137
EYELVNV+EE
Sbjct: 121 EYELVNVLEE 130
>gi|357485891|ref|XP_003613233.1| OB-fold nucleic acid binding domain containing protein [Medicago
truncatula]
gi|355514568|gb|AES96191.1| OB-fold nucleic acid binding domain containing protein [Medicago
truncatula]
Length = 168
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 114/135 (84%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
M +SK LRKPVF KVDQL PGT GHT+ VKVVS K+V Q R DG ++R MR+AECLVG
Sbjct: 34 MPDSKPALRKPVFCKVDQLLPGTRGHTIIVKVVSVKLVDQNDRPDGLKLRHMRMAECLVG 93
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG IIFTAR++QVDLM EG+T+I+RNAKIDMFKG+MRL VD WGR+E+ EPA FTVKE
Sbjct: 94 DETGTIIFTARHEQVDLMTEGSTIIVRNAKIDMFKGTMRLGVDVWGRIELTEPAAFTVKE 153
Query: 121 DNNLSLIEYELVNVV 135
DNNLSLIEYELVN V
Sbjct: 154 DNNLSLIEYELVNAV 168
>gi|359477625|ref|XP_003632005.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
At4g28440-like [Vitis vinifera]
Length = 158
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/129 (79%), Positives = 110/129 (85%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RKPVFTKVDQL+PGT GHTLTVKVVS+K VLQKGR +R IAECLV DETG IIF
Sbjct: 30 RKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLRHTCIAECLVXDETGAIIF 89
Query: 69 TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
TARND+VD+MK G TVILRNAKIDMFKGSMRLAVDKWG VEV E ANF VKE NNLSL+E
Sbjct: 90 TARNDEVDMMKPGATVILRNAKIDMFKGSMRLAVDKWGCVEVTEDANFVVKEQNNLSLVE 149
Query: 129 YELVNVVEE 137
YELVNV+EE
Sbjct: 150 YELVNVLEE 158
>gi|225443616|ref|XP_002279414.1| PREDICTED: uncharacterized protein At4g28440 [Vitis vinifera]
Length = 149
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 110/134 (82%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDET 63
SK +RKPVFTKV QL+PGTSGHTL V+S+ VL KGR +R IAECL+GDET
Sbjct: 16 SKPMMRKPVFTKVYQLKPGTSGHTLIANVLSSNTVLHKGRAAPQNLRHTCIAECLIGDET 75
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G IIFTARNDQVDLMK TTVI+RNAKIDMFKGSMRLAVDKWGRVE EPA F VK+DNN
Sbjct: 76 GTIIFTARNDQVDLMKPETTVIIRNAKIDMFKGSMRLAVDKWGRVEATEPAKFVVKKDNN 135
Query: 124 LSLIEYELVNVVEE 137
LSL+EYELVNVVEE
Sbjct: 136 LSLVEYELVNVVEE 149
>gi|388507362|gb|AFK41747.1| unknown [Lotus japonicus]
Length = 154
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 113/134 (84%), Gaps = 1/134 (0%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ-VRQMRIAECLVGDET 63
K RKPVFTKVDQL+PGT+GHTL KV+S+ VLQKGR +Q +R IAE L+GDET
Sbjct: 21 KPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSDTVLQKGRPSSSQNLRPTLIAESLIGDET 80
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G IIFTARN+QV+LMK G TVILRNAKIDMFKGSMRLAVDKWGR+EV EPA F VKEDNN
Sbjct: 81 GAIIFTARNEQVELMKPGNTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAKFEVKEDNN 140
Query: 124 LSLIEYELVNVVEE 137
LSL+EYELVNVVEE
Sbjct: 141 LSLVEYELVNVVEE 154
>gi|147778578|emb|CAN60304.1| hypothetical protein VITISV_005066 [Vitis vinifera]
Length = 149
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 109/134 (81%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDET 63
SK +RKPVFTKV QL+PGTSGHTL V+S+ VL KGR R IAECL+GDET
Sbjct: 16 SKPMMRKPVFTKVYQLKPGTSGHTLIANVLSSNTVLHKGRAAPQNXRHTCIAECLIGDET 75
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G IIFTARNDQVDLMK TTVI+RNAKIDMFKGSMRLAVDKWGRVE EPA F VK+DNN
Sbjct: 76 GTIIFTARNDQVDLMKPETTVIIRNAKIDMFKGSMRLAVDKWGRVEATEPAKFVVKKDNN 135
Query: 124 LSLIEYELVNVVEE 137
LSL+EYELVNVVEE
Sbjct: 136 LSLVEYELVNVVEE 149
>gi|242038183|ref|XP_002466486.1| hypothetical protein SORBIDRAFT_01g008610 [Sorghum bicolor]
gi|241920340|gb|EER93484.1| hypothetical protein SORBIDRAFT_01g008610 [Sorghum bicolor]
Length = 137
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L VKVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 1 MAADSGARRQPTFTKVDQLRPGTHGHNLIVKVVDSKMVVQRGRDGGPQGRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+MK GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A FTVK
Sbjct: 61 DETGIIVFTARNDQVDVMKPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEFTVK 120
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV VVE
Sbjct: 121 EDNNLSLIEFELVTVVE 137
>gi|125525098|gb|EAY73212.1| hypothetical protein OsI_01083 [Oryza sativa Indica Group]
Length = 141
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR-GDGTQVRQMRIAECLVG 60
A K LRKPVFTKVDQL+P TSGHTLTVKVVS V + R G R RIAECLVG
Sbjct: 6 AGEKPALRKPVFTKVDQLKPVTSGHTLTVKVVSATPVPGRARPGVAAPSRPPRIAECLVG 65
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG I+FTARN+QVDL+K G TVI+RNAKIDMFKGSMRLAVDKWGR+E EPA+FTVKE
Sbjct: 66 DETGAIVFTARNEQVDLLKPGATVIMRNAKIDMFKGSMRLAVDKWGRIEATEPASFTVKE 125
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSL+EYELVNV E
Sbjct: 126 DNNLSLVEYELVNVTE 141
>gi|242055803|ref|XP_002457047.1| hypothetical protein SORBIDRAFT_03g000440 [Sorghum bicolor]
gi|241929022|gb|EES02167.1| hypothetical protein SORBIDRAFT_03g000440 [Sorghum bicolor]
Length = 146
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQV---RQMRIAECLVGD 61
K LRKPVFTKVDQL+PGT+GHTLTVKVVS V + R R RIAECLVGD
Sbjct: 12 KPALRKPVFTKVDQLKPGTNGHTLTVKVVSATPVPGRARPGAPAAVPSRAPRIAECLVGD 71
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ETG I+FTARNDQVDL+K TVILRNAKIDMFKGSMRLAVDKWGR+E EPA+FTVKED
Sbjct: 72 ETGAIVFTARNDQVDLLKPNATVILRNAKIDMFKGSMRLAVDKWGRIEATEPASFTVKED 131
Query: 122 NNLSLIEYELVNVVE 136
NNLSL+EYELVNV E
Sbjct: 132 NNLSLVEYELVNVAE 146
>gi|115435560|ref|NP_001042538.1| Os01g0238600 [Oryza sativa Japonica Group]
gi|11034703|dbj|BAB17204.1| unknown protein [Oryza sativa Japonica Group]
gi|113532069|dbj|BAF04452.1| Os01g0238600 [Oryza sativa Japonica Group]
gi|125569678|gb|EAZ11193.1| hypothetical protein OsJ_01043 [Oryza sativa Japonica Group]
gi|215707173|dbj|BAG93633.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 141
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/136 (74%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR-GDGTQVRQMRIAECLVG 60
A K LRKPVFTKVDQL+P TSGHTLTVKVVS V + R G R RIAECL+G
Sbjct: 6 AGEKPALRKPVFTKVDQLKPVTSGHTLTVKVVSATPVPGRARPGVAAPSRPPRIAECLIG 65
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG I+FTARN+QVDL+K G TVI+RNAKIDMFKGSMRLAVDKWGR+E EPA+FTVKE
Sbjct: 66 DETGAIVFTARNEQVDLLKPGATVIMRNAKIDMFKGSMRLAVDKWGRIEATEPASFTVKE 125
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSL+EYELVNV E
Sbjct: 126 DNNLSLVEYELVNVTE 141
>gi|297823185|ref|XP_002879475.1| hypothetical protein ARALYDRAFT_482340 [Arabidopsis lyrata subsp.
lyrata]
gi|297325314|gb|EFH55734.1| hypothetical protein ARALYDRAFT_482340 [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/129 (75%), Positives = 108/129 (83%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
+KPVF KVDQL+PGTSGHTLTVKVV V QK + +R RI+ECLVGDET I+F
Sbjct: 53 KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSHIRPARISECLVGDETACILF 112
Query: 69 TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
TARNDQVDLMK G +V LRNAKIDMFKGSMRLAVDKWGR+EV EPA+ TVKEDNNLSL+E
Sbjct: 113 TARNDQVDLMKPGASVNLRNAKIDMFKGSMRLAVDKWGRIEVTEPADITVKEDNNLSLVE 172
Query: 129 YELVNVVEE 137
YELVNVVEE
Sbjct: 173 YELVNVVEE 181
>gi|297740422|emb|CBI30604.3| unnamed protein product [Vitis vinifera]
Length = 130
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/130 (76%), Positives = 108/130 (83%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
+RKPVFTKV QL+PGTSGHTL V+S+ VL KGR +R IAECL+GDETG II
Sbjct: 1 MRKPVFTKVYQLKPGTSGHTLIANVLSSNTVLHKGRAAPQNLRHTCIAECLIGDETGTII 60
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
FTARNDQVDLMK TTVI+RNAKIDMFKGSMRLAVDKWGRVE EPA F VK+DNNLSL+
Sbjct: 61 FTARNDQVDLMKPETTVIIRNAKIDMFKGSMRLAVDKWGRVEATEPAKFVVKKDNNLSLV 120
Query: 128 EYELVNVVEE 137
EYELVNVVEE
Sbjct: 121 EYELVNVVEE 130
>gi|356521404|ref|XP_003529346.1| PREDICTED: uncharacterized protein At4g28440-like [Glycine max]
Length = 146
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 111/134 (82%), Gaps = 1/134 (0%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ-VRQMRIAECLVGDET 63
K RKPVFTKVDQL+PGT+GHTL KV+S+ VLQKGR + +R IAECL+GD+T
Sbjct: 13 KPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSNTVLQKGRPSSSHNIRPTLIAECLIGDDT 72
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G IIFTARN+QVD+MK TVILRNAKIDMFKGSMRLAVDKWGR+EV +PA F VKEDNN
Sbjct: 73 GTIIFTARNEQVDMMKPDNTVILRNAKIDMFKGSMRLAVDKWGRIEVTDPAKFVVKEDNN 132
Query: 124 LSLIEYELVNVVEE 137
LSL+EYELVNV EE
Sbjct: 133 LSLVEYELVNVAEE 146
>gi|18403397|ref|NP_565774.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
gi|20198312|gb|AAM15519.1| Expressed protein [Arabidopsis thaliana]
gi|21592737|gb|AAM64686.1| unknown [Arabidopsis thaliana]
gi|22530954|gb|AAM96981.1| expressed protein [Arabidopsis thaliana]
gi|23198430|gb|AAN15742.1| expressed protein [Arabidopsis thaliana]
gi|330253801|gb|AEC08895.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
Length = 182
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQK-GRGDGTQVRQMRIAECLVGDETGMII 67
+KPVF KVDQL+PGTSGHTLTVKVV V QK G + +R RI+ECLVGDET I+
Sbjct: 53 KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACIL 112
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
FTARNDQV+LMK G TV LRNAKIDMFKGSMRLAVDKWGR+E EPA+ TVKEDNNLSL+
Sbjct: 113 FTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLSLV 172
Query: 128 EYELVNVVEE 137
EYELVNVVEE
Sbjct: 173 EYELVNVVEE 182
>gi|255536741|ref|XP_002509437.1| conserved hypothetical protein [Ricinus communis]
gi|223549336|gb|EEF50824.1| conserved hypothetical protein [Ricinus communis]
Length = 150
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 109/131 (83%), Gaps = 2/131 (1%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGT--QVRQMRIAECLVGDETGMI 66
RKPVF KVDQL+PGT+GHTL KV+++ VL KGR + ++R RIAECL+GDETG I
Sbjct: 19 RKPVFVKVDQLKPGTNGHTLIAKVLASDTVLHKGRATASSNRLRNTRIAECLIGDETGTI 78
Query: 67 IFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSL 126
+FTARNDQVDLMK TTVILRNAKIDMFKGSMRLAVDKWGR+EV EPA F VKEDNNLSL
Sbjct: 79 LFTARNDQVDLMKPETTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAKFAVKEDNNLSL 138
Query: 127 IEYELVNVVEE 137
+EYELV V E
Sbjct: 139 VEYELVTVAAE 149
>gi|297849404|ref|XP_002892583.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338425|gb|EFH68842.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 150
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/138 (76%), Positives = 120/138 (86%), Gaps = 4/138 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ---VRQMRIAEC 57
MAE+ LRKPVFTKV++LRPGTSGH+L VKVV+TKMVLQ+G G RQMRIAEC
Sbjct: 11 MAEATPALRKPVFTKVNELRPGTSGHSLNVKVVNTKMVLQRGGGGRPMGPQARQMRIAEC 70
Query: 58 LVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANF 116
LVGDETG+IIFTARNDQVDLMKEG+ + LRNAKIDM+KGSMRLAVD+WGRV+VA EP +
Sbjct: 71 LVGDETGIIIFTARNDQVDLMKEGSVLTLRNAKIDMYKGSMRLAVDRWGRVDVAEEPTDI 130
Query: 117 TVKEDNNLSLIEYELVNV 134
TVK+DNNLSLIEYELV+V
Sbjct: 131 TVKDDNNLSLIEYELVSV 148
>gi|356543853|ref|XP_003540374.1| PREDICTED: uncharacterized protein At4g28440-like [Glycine max]
Length = 141
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/141 (73%), Positives = 112/141 (79%), Gaps = 4/141 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMV----LQKGRGDGTQVRQMRIAE 56
MA + RKPVF KVDQL+PGT+GHTLTVKVVS+K V + GR R RIAE
Sbjct: 1 MATPATTKRKPVFVKVDQLKPGTNGHTLTVKVVSSKPVKTVSTRGGRPTVLAARPSRIAE 60
Query: 57 CLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
CLVGDETG IIFTARN+QVD M G TVILRNAKIDMFKGSMRLAVDKWGR+E +PANF
Sbjct: 61 CLVGDETGTIIFTARNEQVDHMNAGATVILRNAKIDMFKGSMRLAVDKWGRIEPTDPANF 120
Query: 117 TVKEDNNLSLIEYELVNVVEE 137
VKEDNNLSL+EYELVNVVEE
Sbjct: 121 DVKEDNNLSLVEYELVNVVEE 141
>gi|326489495|dbj|BAK01728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 140
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/131 (74%), Positives = 110/131 (83%), Gaps = 3/131 (2%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR---GDGTQVRQMRIAECLVGDETGM 65
RKPVF KVDQL+P TSGHTL KV+S+K VLQK R G G + RIAECL+GDETG
Sbjct: 10 RKPVFVKVDQLKPVTSGHTLVAKVLSSKTVLQKARATGGPGPAAKPTRIAECLIGDETGC 69
Query: 66 IIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
++FTARNDQVD++K G TVI+RNAKIDMFKGSMRLAVDKWGRVEV EPA+F VKEDNNLS
Sbjct: 70 VLFTARNDQVDVLKPGNTVIIRNAKIDMFKGSMRLAVDKWGRVEVTEPASFGVKEDNNLS 129
Query: 126 LIEYELVNVVE 136
L+EYELVNV E
Sbjct: 130 LVEYELVNVEE 140
>gi|356549894|ref|XP_003543325.1| PREDICTED: uncharacterized protein At4g28440-like isoform 1
[Glycine max]
gi|356549896|ref|XP_003543326.1| PREDICTED: uncharacterized protein At4g28440-like isoform 2
[Glycine max]
Length = 141
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 111/141 (78%), Gaps = 4/141 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMV----LQKGRGDGTQVRQMRIAE 56
MA + RKPVF KVDQL+PGT+GHTLTVKVVS+K V + GR R RIAE
Sbjct: 1 MATPTTTKRKPVFVKVDQLKPGTNGHTLTVKVVSSKPVKTVTTRGGRSSVLAARPSRIAE 60
Query: 57 CLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
CLVGDETG IIFTARN+QVD M G TVILRNAKIDMFKGSMRLAVDKWGR+E +PA F
Sbjct: 61 CLVGDETGTIIFTARNEQVDHMNAGATVILRNAKIDMFKGSMRLAVDKWGRIEPTDPAKF 120
Query: 117 TVKEDNNLSLIEYELVNVVEE 137
VKEDNNLSL+EYELVNVVEE
Sbjct: 121 EVKEDNNLSLVEYELVNVVEE 141
>gi|413951170|gb|AFW83819.1| hypothetical protein ZEAMMB73_247725 [Zea mays]
Length = 217
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 113/137 (82%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 81 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 140
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TVK
Sbjct: 141 DETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTVK 200
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV V E
Sbjct: 201 EDNNLSLIEFELVTVTE 217
>gi|357129104|ref|XP_003566207.1| PREDICTED: uncharacterized protein At4g28440-like [Brachypodium
distachyon]
Length = 144
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 107/134 (79%), Gaps = 2/134 (1%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR--GDGTQVRQMRIAECLVGDE 62
K LRKPVF KVDQL+PGT+GHTL VKVVS V + R + R RIAECLVGDE
Sbjct: 11 KPALRKPVFVKVDQLKPGTNGHTLVVKVVSANPVPGRTRPGAPASSSRPPRIAECLVGDE 70
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG IIFTARNDQVD++K G T ILRNAKIDMFK SMRLAVDKWGRVE AEPA+FTVKEDN
Sbjct: 71 TGTIIFTARNDQVDVLKPGATAILRNAKIDMFKCSMRLAVDKWGRVEAAEPASFTVKEDN 130
Query: 123 NLSLIEYELVNVVE 136
NLS +EYELVNV E
Sbjct: 131 NLSQVEYELVNVAE 144
>gi|413951172|gb|AFW83821.1| hypothetical protein ZEAMMB73_247725 [Zea mays]
Length = 219
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 113/137 (82%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 83 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 142
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TVK
Sbjct: 143 DETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTVK 202
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV V E
Sbjct: 203 EDNNLSLIEFELVTVTE 219
>gi|6573753|gb|AAF17673.1|AC009398_22 F20B24.1 [Arabidopsis thaliana]
Length = 181
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 123/165 (74%), Gaps = 31/165 (18%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD--GTQVRQMRIAECL 58
MAE+ S LRKPVFTKV++LRPGT+GH+L VKVV+TKMV+Q+G G G Q RQMRIAECL
Sbjct: 15 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 74
Query: 59 VGDETGMIIFTARNDQ----------------------------VDLMKEGTTVILRNAK 90
VGDETG+IIFTARNDQ VD+MKEG+ V LRNAK
Sbjct: 75 VGDETGIIIFTARNDQGERINAFVMYFSCTFYRFMTDAIIHFYPVDMMKEGSVVTLRNAK 134
Query: 91 IDMFKGSMRLAVDKWGRVEVA-EPANFTVKEDNNLSLIEYELVNV 134
IDM+KGSMRLAVD+WGRVEVA EP + TVK+DNNLSLIEYELV+V
Sbjct: 135 IDMYKGSMRLAVDRWGRVEVAEEPTDITVKDDNNLSLIEYELVSV 179
>gi|195620852|gb|ACG32256.1| hypothetical protein [Zea mays]
Length = 137
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P+FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 1 MAADSGARRQPIFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TVK
Sbjct: 61 DETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTVK 120
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV V E
Sbjct: 121 EDNNLSLIEFELVTVTE 137
>gi|351726271|ref|NP_001236609.1| uncharacterized protein LOC100305527 [Glycine max]
gi|255625805|gb|ACU13247.1| unknown [Glycine max]
Length = 146
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/135 (70%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ-VRQMRIAECLVGDE 62
+K RKPVFTKVDQL+PGT+GHTL KV+S+ V+ K R ++ IAECL+GD+
Sbjct: 12 NKPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSDTVVHKPRPSSAHNLKPTVIAECLIGDD 71
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARN+QVD+MK G TVILRNAKIDMFKGSMR+AVDKWGRVEV +PA+F VKEDN
Sbjct: 72 TGTIVFTARNEQVDMMKAGATVILRNAKIDMFKGSMRMAVDKWGRVEVTDPADFEVKEDN 131
Query: 123 NLSLIEYELVNVVEE 137
NLSL+EYELVNVVEE
Sbjct: 132 NLSLVEYELVNVVEE 146
>gi|357498627|ref|XP_003619602.1| hypothetical protein MTR_6g060020 [Medicago truncatula]
gi|355494617|gb|AES75820.1| hypothetical protein MTR_6g060020 [Medicago truncatula]
Length = 184
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 116/135 (85%), Gaps = 1/135 (0%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
E+K GLRK VF KV+QLRPG + HTLTVKVV+TKMV+QKG DG Q RQM +A LVGD
Sbjct: 51 GEAKPGLRKLVFIKVEQLRPGINAHTLTVKVVNTKMVMQKGHPDGPQPRQM-LAGSLVGD 109
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ET MIIFTARND+V+L+K+G+T+ILRNAKID+FKGSM L VDKWGRVEV + NFTVK+D
Sbjct: 110 ETRMIIFTARNDKVNLLKDGSTIILRNAKIDIFKGSMWLVVDKWGRVEVTDLTNFTVKDD 169
Query: 122 NNLSLIEYELVNVVE 136
NNLSLIEYELVNVVE
Sbjct: 170 NNLSLIEYELVNVVE 184
>gi|297723601|ref|NP_001174164.1| Os05g0100800 [Oryza sativa Japonica Group]
gi|57863891|gb|AAG03091.2|AC073405_7 unknown protein [Oryza sativa Japonica Group]
gi|57863844|gb|AAW56885.1| unknown protein [Oryza sativa Japonica Group]
gi|215768079|dbj|BAH00308.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195909|gb|EEC78336.1| hypothetical protein OsI_18077 [Oryza sativa Indica Group]
gi|222629857|gb|EEE61989.1| hypothetical protein OsJ_16770 [Oryza sativa Japonica Group]
gi|255675927|dbj|BAH92892.1| Os05g0100800 [Oryza sativa Japonica Group]
Length = 134
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 115/137 (83%), Gaps = 4/137 (2%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA+S R+P FTKVDQLRPGT GH L +KVV +KMVLQ RG G Q R MRIAECLVG
Sbjct: 1 MADS-GARRQPSFTKVDQLRPGTHGHNLLLKVVDSKMVLQ--RGGGPQGRHMRIAECLVG 57
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+MK G +V LRNAKIDMFKGSMRLAVDKWG V+ AE PA+FTVK
Sbjct: 58 DETGIIVFTARNDQVDVMKAGASVDLRNAKIDMFKGSMRLAVDKWGIVKAAESPADFTVK 117
Query: 120 EDNNLSLIEYELVNVVE 136
EDNN+SLIE+ELV VVE
Sbjct: 118 EDNNMSLIEFELVTVVE 134
>gi|351726120|ref|NP_001235836.1| uncharacterized protein LOC100306493 [Glycine max]
gi|255628705|gb|ACU14697.1| unknown [Glycine max]
Length = 146
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 111/134 (82%), Gaps = 1/134 (0%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ-VRQMRIAECLVGDET 63
K RKPVFTKVDQL+PGT+GHTL KV+S+ VLQKGR + +R IAECL+GD+T
Sbjct: 13 KPAKRKPVFTKVDQLKPGTNGHTLVAKVLSSNTVLQKGRPSSSHNIRPTLIAECLIGDDT 72
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G IIFTARN+QVD+MK TVILRNAKIDMFKGSMRLAVDKWGR+EV + A F VKE+NN
Sbjct: 73 GAIIFTARNEQVDIMKIDNTVILRNAKIDMFKGSMRLAVDKWGRIEVTDSAKFIVKEENN 132
Query: 124 LSLIEYELVNVVEE 137
LSL+EYELVNVVEE
Sbjct: 133 LSLVEYELVNVVEE 146
>gi|226531418|ref|NP_001143338.1| uncharacterized protein LOC100275940 [Zea mays]
gi|195618434|gb|ACG31047.1| hypothetical protein [Zea mays]
gi|195619526|gb|ACG31593.1| hypothetical protein [Zea mays]
gi|195620962|gb|ACG32311.1| hypothetical protein [Zea mays]
gi|223973027|gb|ACN30701.1| unknown [Zea mays]
gi|413951169|gb|AFW83818.1| hypothetical protein ZEAMMB73_247725 [Zea mays]
Length = 137
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 113/137 (82%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 1 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TVK
Sbjct: 61 DETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTVK 120
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV V E
Sbjct: 121 EDNNLSLIEFELVTVTE 137
>gi|302794097|ref|XP_002978813.1| hypothetical protein SELMODRAFT_271333 [Selaginella moellendorffii]
gi|302805953|ref|XP_002984727.1| hypothetical protein SELMODRAFT_271716 [Selaginella moellendorffii]
gi|300147709|gb|EFJ14372.1| hypothetical protein SELMODRAFT_271716 [Selaginella moellendorffii]
gi|300153622|gb|EFJ20260.1| hypothetical protein SELMODRAFT_271333 [Selaginella moellendorffii]
Length = 134
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/132 (79%), Positives = 117/132 (88%)
Query: 6 SGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGM 65
+ LRKPVF KVDQLRPGT+GHTL VKVVS+KMVL+K R DG VRQ+RIAEC+VGD+TG+
Sbjct: 3 ASLRKPVFIKVDQLRPGTTGHTLVVKVVSSKMVLRKARPDGQNVRQVRIAECVVGDDTGV 62
Query: 66 IIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
IIFTARN+QVDLMK G TV LRNAKIDMFKGSMRLAVDKWGRVE A +FTVKEDNNLS
Sbjct: 63 IIFTARNEQVDLMKPGVTVNLRNAKIDMFKGSMRLAVDKWGRVEPAADESFTVKEDNNLS 122
Query: 126 LIEYELVNVVEE 137
+EYELVNVV+E
Sbjct: 123 AVEYELVNVVDE 134
>gi|225460584|ref|XP_002263814.1| PREDICTED: uncharacterized protein At4g28440 [Vitis vinifera]
Length = 154
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/129 (76%), Positives = 107/129 (82%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RK VFTKVDQL+PGT GHTLTVKVVS+K VLQ GR +R RIAECLVGDET IIF
Sbjct: 26 RKSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGRLVLQHLRHTRIAECLVGDETRAIIF 85
Query: 69 TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
TARNDQVD++K G TVIL AKIDMFKGSMRLAVDKWGRVEV + ANF VKE NNL L+E
Sbjct: 86 TARNDQVDMIKLGATVILHKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLLLVE 145
Query: 129 YELVNVVEE 137
YELVNV+EE
Sbjct: 146 YELVNVLEE 154
>gi|195621668|gb|ACG32664.1| hypothetical protein [Zea mays]
Length = 138
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 114/138 (82%), Gaps = 2/138 (1%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGR-GDGTQVRQMRIAECLV 59
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G G Q RQMRIAECLV
Sbjct: 1 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGGPQGRQMRIAECLV 60
Query: 60 GDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTV 118
GDETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TV
Sbjct: 61 GDETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTV 120
Query: 119 KEDNNLSLIEYELVNVVE 136
KEDNNLSLIE+ELV V E
Sbjct: 121 KEDNNLSLIEFELVTVTE 138
>gi|195610986|gb|ACG27323.1| hypothetical protein [Zea mays]
Length = 137
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/137 (72%), Positives = 113/137 (82%), Gaps = 1/137 (0%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +K+V+Q+GR G Q RQMRIAECLVG
Sbjct: 1 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKIVVQRGREGGPQGRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVK 119
DETG+I+FTARNDQVD+++ GTTV LRNAKIDMFKGSMRLAVDKWG V+ AE A +TVK
Sbjct: 61 DETGIIVFTARNDQVDVIRPGTTVELRNAKIDMFKGSMRLAVDKWGIVKAAESSAEWTVK 120
Query: 120 EDNNLSLIEYELVNVVE 136
EDNNLSLIE+ELV V E
Sbjct: 121 EDNNLSLIEFELVTVTE 137
>gi|357446711|ref|XP_003593631.1| hypothetical protein MTR_2g014360 [Medicago truncatula]
gi|355482679|gb|AES63882.1| hypothetical protein MTR_2g014360 [Medicago truncatula]
gi|388511651|gb|AFK43887.1| unknown [Medicago truncatula]
Length = 152
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 112/140 (80%), Gaps = 6/140 (4%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ------VRQMRIAEC 57
+K RKP FTKVDQ++PGT+GHTL KV++++ VLQKG G VR I+EC
Sbjct: 13 TKPAKRKPTFTKVDQMKPGTNGHTLIAKVLTSETVLQKGGGTRPSSSSRGIVRPTLISEC 72
Query: 58 LVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFT 117
L+GDETG IIFTARN+QV+LMK G TVI+RN+KIDMFKGSMRLAVDKWGR+EV +PA F
Sbjct: 73 LIGDETGTIIFTARNEQVELMKAGNTVIIRNSKIDMFKGSMRLAVDKWGRIEVTDPAEFV 132
Query: 118 VKEDNNLSLIEYELVNVVEE 137
VKEDNNLSLIEYELVN VEE
Sbjct: 133 VKEDNNLSLIEYELVNAVEE 152
>gi|351723599|ref|NP_001235237.1| uncharacterized protein LOC100499987 [Glycine max]
gi|255628339|gb|ACU14514.1| unknown [Glycine max]
Length = 146
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQ-VRQMRIAECLVGDE 62
+K RKPVFTKV+QL+PGT+GHTL KV+S+ V+ K R ++ IAECL+GD+
Sbjct: 12 NKPAKRKPVFTKVNQLKPGTNGHTLVAKVLSSDTVVHKPRPSSAHNLKPTVIAECLIGDD 71
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARN+QVD+MK G TVI+RNAKIDMFKGSMR+AVDKWGRVEV +PA+F VKEDN
Sbjct: 72 TGTIVFTARNEQVDMMKAGATVIIRNAKIDMFKGSMRMAVDKWGRVEVTDPADFEVKEDN 131
Query: 123 NLSLIEYELVNVVEE 137
NLSL+EYELVNVVEE
Sbjct: 132 NLSLVEYELVNVVEE 146
>gi|388506946|gb|AFK41539.1| unknown [Medicago truncatula]
Length = 140
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 112/138 (81%), Gaps = 4/138 (2%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL----QKGRGDGTQVRQMRIAECLV 59
+++ RKPVF KVDQL+PGT+GHTLTVKVV++ V + GR R RIAEC++
Sbjct: 3 TQTAKRKPVFVKVDQLKPGTNGHTLTVKVVNSSPVKTIPNRGGRSAVIASRPSRIAECVI 62
Query: 60 GDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVK 119
GDET IIFTARN+QVDLM G T+ILRNAKIDMFKGSMRLAVD+WGR+EV EPANF V+
Sbjct: 63 GDETASIIFTARNEQVDLMNPGATLILRNAKIDMFKGSMRLAVDRWGRIEVTEPANFEVR 122
Query: 120 EDNNLSLIEYELVNVVEE 137
EDNNLSL+EYELVNVVEE
Sbjct: 123 EDNNLSLVEYELVNVVEE 140
>gi|226509809|ref|NP_001140753.1| uncharacterized protein LOC100272828 [Zea mays]
gi|194700924|gb|ACF84546.1| unknown [Zea mays]
gi|195619214|gb|ACG31437.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|413947867|gb|AFW80516.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 146
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 108/135 (80%), Gaps = 3/135 (2%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMR---IAECLVGD 61
K LR+PVFTKVDQLRPGT+GHTLTVKVVS V + R R IAECLVGD
Sbjct: 12 KPALRRPVFTKVDQLRPGTNGHTLTVKVVSATPVPGRARPGAPAAAPSRAPRIAECLVGD 71
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ETG I+FTARNDQVDL+K TVILRNAKIDMFKGSMRLAVDKWGR+E EPA+FTVKED
Sbjct: 72 ETGAIVFTARNDQVDLLKPNATVILRNAKIDMFKGSMRLAVDKWGRIEAVEPASFTVKED 131
Query: 122 NNLSLIEYELVNVVE 136
NNLSLIEYELVNV E
Sbjct: 132 NNLSLIEYELVNVAE 146
>gi|359493537|ref|XP_002266387.2| PREDICTED: uncharacterized protein LOC100241314 [Vitis vinifera]
Length = 425
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 107/128 (83%)
Query: 10 KPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFT 69
K VFTKVDQL+PGT GHTLTVKVVS+K VLQ G+ +R RIAECLVGDET IIFT
Sbjct: 298 KSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGQLVSQHLRHTRIAECLVGDETRAIIFT 357
Query: 70 ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEY 129
ARNDQVD++K G TVIL AKIDMFKGSMRLAVDKWGRVEV + ANF VKE NNLSL+EY
Sbjct: 358 ARNDQVDMIKSGATVILYKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLSLVEY 417
Query: 130 ELVNVVEE 137
ELVNV+EE
Sbjct: 418 ELVNVLEE 425
>gi|226507244|ref|NP_001146919.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195605166|gb|ACG24413.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|195610560|gb|ACG27110.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|414875569|tpg|DAA52700.1| TPA: OB-fold nucleic acid binding domain containing protein [Zea
mays]
Length = 146
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 109/135 (80%), Gaps = 3/135 (2%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMR---IAECLVGD 61
K LRKPVFTKVDQL+PGT+GHTLTVKVVS V + R R IAECLVGD
Sbjct: 12 KPALRKPVFTKVDQLKPGTNGHTLTVKVVSATPVPGRARPGAPAAASSRAPRIAECLVGD 71
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
ETG+I+FTARNDQVDL+K TVILRNAKIDMFKGSMRLAVDKWGR+E EPA+FTVKED
Sbjct: 72 ETGVIVFTARNDQVDLLKPDATVILRNAKIDMFKGSMRLAVDKWGRIEATEPASFTVKED 131
Query: 122 NNLSLIEYELVNVVE 136
NNLSL+EYELVNV E
Sbjct: 132 NNLSLVEYELVNVAE 146
>gi|116793785|gb|ABK26877.1| unknown [Picea sitchensis]
Length = 136
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 115/135 (85%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE+ +GL+KP F KV+QLRP T GHTL VKVV++K+V QKGR DG Q RQMR+AECLVG
Sbjct: 1 MAEANTGLQKPEFIKVEQLRPTTYGHTLKVKVVNSKVVFQKGRSDGPQGRQMRLAECLVG 60
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DET MI+FTAR DQVDLMK G TVILRNAKIDMFKGSMRL VD+ GR+E E A+F VKE
Sbjct: 61 DETAMIVFTARGDQVDLMKTGATVILRNAKIDMFKGSMRLVVDRSGRIEPTEQADFEVKE 120
Query: 121 DNNLSLIEYELVNVV 135
DNNLSLIE+EL+NVV
Sbjct: 121 DNNLSLIEFELINVV 135
>gi|388507556|gb|AFK41844.1| unknown [Lotus japonicus]
Length = 140
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 110/133 (82%), Gaps = 4/133 (3%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL----QKGRGDGTQVRQMRIAECLVGDETG 64
RKPVF KVDQL+PGT+GHTLTVKVVS+K V + GR + RIAEC+VGDETG
Sbjct: 8 RKPVFVKVDQLKPGTNGHTLTVKVVSSKPVKAVGNRVGRPSVLAAKPPRIAECVVGDETG 67
Query: 65 MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNL 124
I+FTARN+QVDLM +T+ILRNAKIDMFKGSMRLAVD+WGR+EV EPANF VKE+NNL
Sbjct: 68 TIVFTARNEQVDLMTPDSTIILRNAKIDMFKGSMRLAVDRWGRIEVTEPANFEVKEENNL 127
Query: 125 SLIEYELVNVVEE 137
SL+EYELVNV +E
Sbjct: 128 SLVEYELVNVADE 140
>gi|297604119|ref|NP_001055012.2| Os05g0244600 [Oryza sativa Japonica Group]
gi|255676168|dbj|BAF16926.2| Os05g0244600, partial [Oryza sativa Japonica Group]
Length = 175
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/136 (72%), Positives = 109/136 (80%), Gaps = 4/136 (2%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQV----RQMRIAECLVG 60
K LRKPVF KVDQL+PGT GHTLTVKVVS V +GR G R RIAECLVG
Sbjct: 40 KPALRKPVFVKVDQLKPGTCGHTLTVKVVSANPVPARGRAGGGGPAVGSRPARIAECLVG 99
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG+I+FTARN+QVD++ G T ILRNA+IDMFKGSMRLAVDKWGRVEV EPA+F VKE
Sbjct: 100 DETGVIVFTARNEQVDMLMPGNTAILRNARIDMFKGSMRLAVDKWGRVEVTEPASFAVKE 159
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSL+EYELVNV E
Sbjct: 160 DNNLSLVEYELVNVPE 175
>gi|55168102|gb|AAV43970.1| unknown protein [Oryza sativa Japonica Group]
gi|125551509|gb|EAY97218.1| hypothetical protein OsI_19137 [Oryza sativa Indica Group]
gi|215707282|dbj|BAG93742.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630836|gb|EEE62968.1| hypothetical protein OsJ_17775 [Oryza sativa Japonica Group]
Length = 145
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/136 (72%), Positives = 109/136 (80%), Gaps = 4/136 (2%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQV----RQMRIAECLVG 60
K LRKPVF KVDQL+PGT GHTLTVKVVS V +GR G R RIAECLVG
Sbjct: 10 KPALRKPVFVKVDQLKPGTCGHTLTVKVVSANPVPARGRAGGGGPAVGSRPARIAECLVG 69
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
DETG+I+FTARN+QVD++ G T ILRNA+IDMFKGSMRLAVDKWGRVEV EPA+F VKE
Sbjct: 70 DETGVIVFTARNEQVDMLMPGNTAILRNARIDMFKGSMRLAVDKWGRVEVTEPASFAVKE 129
Query: 121 DNNLSLIEYELVNVVE 136
DNNLSL+EYELVNV E
Sbjct: 130 DNNLSLVEYELVNVPE 145
>gi|388499768|gb|AFK37950.1| unknown [Lotus japonicus]
Length = 150
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGT------QVRQMRIAEC 57
+K RKPVFTKVDQL+PGT GHTL KV+S+ VL KG G G +R IAEC
Sbjct: 11 NKPAKRKPVFTKVDQLKPGTDGHTLVAKVLSSDTVLHKGAGGGGSSSSSQNIRPTVIAEC 70
Query: 58 LVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFT 117
L+GD+T +IFTARN+QV+LMK GTTVI+RNAKIDMFKGS+RLAVDKWGR+EV EPANF
Sbjct: 71 LIGDDTATVIFTARNEQVELMKPGTTVIIRNAKIDMFKGSIRLAVDKWGRIEVTEPANFV 130
Query: 118 VKEDNNLSLIEYELVNVVEE 137
VKED NLS +EYELVNVVEE
Sbjct: 131 VKEDTNLSQVEYELVNVVEE 150
>gi|218189071|gb|EEC71498.1| hypothetical protein OsI_03774 [Oryza sativa Indica Group]
Length = 140
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 107/131 (81%), Gaps = 5/131 (3%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQM-----RIAECLVGDET 63
RKPVF KVDQL+PGT GHTL KV+S+K V+QKGR RIAECL+GDET
Sbjct: 8 RKPVFVKVDQLKPGTGGHTLVAKVLSSKTVVQKGRAAAGAGAGPAARPTRIAECLIGDET 67
Query: 64 GMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
G I+FTARN+QVDLMK +TVI+RNAKIDMFKGSMRLAVDKWGR+EV EPA+F VKEDNN
Sbjct: 68 GCILFTARNEQVDLMKADSTVIIRNAKIDMFKGSMRLAVDKWGRIEVTEPASFNVKEDNN 127
Query: 124 LSLIEYELVNV 134
LSL+EYELVNV
Sbjct: 128 LSLVEYELVNV 138
>gi|115439995|ref|NP_001044277.1| Os01g0754100 [Oryza sativa Japonica Group]
gi|57899617|dbj|BAD87196.1| DNA-binding protein-related-like [Oryza sativa Japonica Group]
gi|57900332|dbj|BAD87285.1| DNA-binding protein-related-like [Oryza sativa Japonica Group]
gi|113533808|dbj|BAF06191.1| Os01g0754100 [Oryza sativa Japonica Group]
gi|215695279|dbj|BAG90470.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619265|gb|EEE55397.1| hypothetical protein OsJ_03490 [Oryza sativa Japonica Group]
Length = 140
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 107/129 (82%), Gaps = 3/129 (2%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQM---RIAECLVGDETGM 65
RKPVF KVDQL+PGT GHTL KV+S+K V+QKGR RIAECL+GDETG
Sbjct: 10 RKPVFVKVDQLKPGTGGHTLVAKVLSSKTVVQKGRAAAGAGPAARPTRIAECLIGDETGC 69
Query: 66 IIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
I+FTARN+QVDLMK +TVI+RNAKIDMFKGSMRLAVDKWGR+EV EPA+F VKEDNNLS
Sbjct: 70 ILFTARNEQVDLMKADSTVIIRNAKIDMFKGSMRLAVDKWGRIEVTEPASFNVKEDNNLS 129
Query: 126 LIEYELVNV 134
L+EYELVNV
Sbjct: 130 LVEYELVNV 138
>gi|224092922|ref|XP_002309755.1| predicted protein [Populus trichocarpa]
gi|118483079|gb|ABK93449.1| unknown [Populus trichocarpa]
gi|222852658|gb|EEE90205.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMV-LQKGRGDGTQV-----RQMRI 54
MA + + RKPVF KV++L+PGT+GH LTVK++ +K V + K R + R RI
Sbjct: 1 MATAAAEKRKPVFIKVEELKPGTNGHNLTVKILDSKPVPVPKPRRAPMSLSQHPQRPSRI 60
Query: 55 AECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA 114
ECLVGDETG I+FTARN+Q D+MK G TVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA
Sbjct: 61 NECLVGDETGCIVFTARNEQADMMKPGATVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA 120
Query: 115 NFTVKEDNNLSLIEYELVNV 134
NF VKE+NNLSL+EYELV V
Sbjct: 121 NFAVKENNNLSLVEYELVTV 140
>gi|297803236|ref|XP_002869502.1| hypothetical protein ARALYDRAFT_913675 [Arabidopsis lyrata subsp.
lyrata]
gi|297315338|gb|EFH45761.1| hypothetical protein ARALYDRAFT_913675 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 106/132 (80%), Gaps = 6/132 (4%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDE 62
RKPVF KV+QL+PGT+GHTLTVKV+ +V+ +K R + R RI ECL+GDE
Sbjct: 18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPTSSLSRPSQPSRIVECLIGDE 77
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E EPA+F VKEDN
Sbjct: 78 TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATEPASFAVKEDN 137
Query: 123 NLSLIEYELVNV 134
NLSL+EYEL+NV
Sbjct: 138 NLSLVEYELINV 149
>gi|224133442|ref|XP_002328043.1| predicted protein [Populus trichocarpa]
gi|118488667|gb|ABK96145.1| unknown [Populus trichocarpa]
gi|222837452|gb|EEE75831.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/132 (69%), Positives = 106/132 (80%), Gaps = 6/132 (4%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMV-LQKGRGDGTQV-----RQMRIAECLVGDE 62
RKPVF KV++L+PGT+GH LTVKV+ +K V + K R + R RI ECLVGDE
Sbjct: 8 RKPVFIKVEELKPGTNGHNLTVKVLESKPVPVPKPRRAPMSLSQRPQRPSRINECLVGDE 67
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARN+QVD+M+ G TVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF V E+N
Sbjct: 68 TGCIVFTARNEQVDIMQPGATVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFAVTENN 127
Query: 123 NLSLIEYELVNV 134
NLSL+EYELV V
Sbjct: 128 NLSLVEYELVTV 139
>gi|449453557|ref|XP_004144523.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
Length = 145
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/141 (72%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQK---GRGDGTQVRQM---RIA 55
A + RKPVF KV++L+PGTSGHTLTVKVVS+K V GR R RI+
Sbjct: 5 AANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRIS 64
Query: 56 ECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 115
ECLVGDETG I+FTARNDQVDLMK G TV LRNAKIDMFKGSMRLAVDKWGRVEVAEPAN
Sbjct: 65 ECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 124
Query: 116 FTVKEDNNLSLIEYELVNVVE 136
F KEDNNLSL+EYELVNV E
Sbjct: 125 FEAKEDNNLSLVEYELVNVEE 145
>gi|449526295|ref|XP_004170149.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
Length = 145
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/141 (71%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQK---GRGDGTQVRQM---RIA 55
A + RKPVF KV++L+PGTSGHTLTVKVVS+K V GR R RI+
Sbjct: 5 AANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRIS 64
Query: 56 ECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 115
ECLVGDETG I+FTARNDQVD+MK G TV LRNAKIDMFKGSMRLAVDKWGRVEVAEPAN
Sbjct: 65 ECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 124
Query: 116 FTVKEDNNLSLIEYELVNVVE 136
F KEDNNLSL+EYELVNV E
Sbjct: 125 FEAKEDNNLSLVEYELVNVEE 145
>gi|226493297|ref|NP_001149564.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|194702478|gb|ACF85323.1| unknown [Zea mays]
gi|195628042|gb|ACG35851.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|413953597|gb|AFW86246.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 166
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 106/136 (77%), Gaps = 3/136 (2%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A+ LRKPVFT VDQLRP T GHTLT +V+S + VL K T + + R+AECLVGD
Sbjct: 33 ADGAKTLRKPVFTTVDQLRPQTHGHTLTARVISARTVLDK---PSTHIGRTRVAECLVGD 89
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
TG ++ TARN+QVDL+K TTVI RNAKIDMFKG+MRL VDKWGR+EV +PA+F V +D
Sbjct: 90 STGTVLVTARNEQVDLLKPDTTVIFRNAKIDMFKGTMRLVVDKWGRIEVTQPADFKVNQD 149
Query: 122 NNLSLIEYELVNVVEE 137
NN+SL+EYELV+V EE
Sbjct: 150 NNMSLVEYELVDVDEE 165
>gi|242094346|ref|XP_002437663.1| hypothetical protein SORBIDRAFT_10g000380 [Sorghum bicolor]
gi|241915886|gb|EER89030.1| hypothetical protein SORBIDRAFT_10g000380 [Sorghum bicolor]
Length = 170
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 106/135 (78%), Gaps = 3/135 (2%)
Query: 3 ESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDE 62
+ LRKPVFT VDQLRP T GHTLT +V+S + VL K T + + R+AECLVGD
Sbjct: 38 DGAKALRKPVFTTVDQLRPQTHGHTLTARVISARTVLDK---PSTHLGRTRVAECLVGDS 94
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG ++ TARN+QVDL++ TTVI RNAKIDMFKG+MRLAVDKWGR+EV +PA+F V +DN
Sbjct: 95 TGTVLVTARNEQVDLLEPDTTVIFRNAKIDMFKGTMRLAVDKWGRIEVTQPADFKVNQDN 154
Query: 123 NLSLIEYELVNVVEE 137
N+SL+EYELV+V EE
Sbjct: 155 NMSLVEYELVDVDEE 169
>gi|24413970|dbj|BAC22221.1| unknown protein [Oryza sativa Japonica Group]
gi|125553704|gb|EAY99309.1| hypothetical protein OsI_21276 [Oryza sativa Indica Group]
gi|125595750|gb|EAZ35530.1| hypothetical protein OsJ_19812 [Oryza sativa Japonica Group]
gi|215701166|dbj|BAG92590.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 165
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 107/130 (82%), Gaps = 6/130 (4%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
LRKPVFT V++LRP + GHTLT +V+S +++L D R R+AECLVGD TG ++
Sbjct: 41 LRKPVFTTVERLRPQSHGHTLTARVLSARIIL-----DNPPPR-ARLAECLVGDNTGTVL 94
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
FTARN QVDL+K GTTVI RNAKIDMFKG+MRLAVDKWGR+EV +PA+F VKEDNN+SL+
Sbjct: 95 FTARNQQVDLVKPGTTVIFRNAKIDMFKGTMRLAVDKWGRIEVTDPASFQVKEDNNVSLV 154
Query: 128 EYELVNVVEE 137
EYELV+VV+E
Sbjct: 155 EYELVDVVDE 164
>gi|147833000|emb|CAN70659.1| hypothetical protein VITISV_030916 [Vitis vinifera]
Length = 295
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/118 (75%), Positives = 96/118 (81%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KVDQL+PGT GHTLT KVVS+K VLQ G +R RIAECLVGDET IIFTARNDQ
Sbjct: 25 KVDQLKPGTGGHTLTXKVVSSKTVLQNGXLVSXHLRHTRIAECLVGDETRAIIFTARNDQ 84
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELV 132
VD++K G TVIL AKIDMFKGSMRLAVDKWGRVEV + ANF VKE NNLSL+EYELV
Sbjct: 85 VDMIKXGATVILHKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLSLVEYELV 142
>gi|15235304|ref|NP_194573.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
gi|73921135|sp|O49453.1|Y4844_ARATH RecName: Full=Uncharacterized protein At4g28440
gi|2842486|emb|CAA16883.1| putative protein [Arabidopsis thaliana]
gi|7269698|emb|CAB79646.1| putative protein [Arabidopsis thaliana]
gi|15292943|gb|AAK93582.1| unknown protein [Arabidopsis thaliana]
gi|15912309|gb|AAL08288.1| AT4g28440/F20O9_120 [Arabidopsis thaliana]
gi|20259657|gb|AAM14346.1| unknown protein [Arabidopsis thaliana]
gi|21593661|gb|AAM65628.1| unknown [Arabidopsis thaliana]
gi|332660087|gb|AEE85487.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
thaliana]
Length = 153
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 105/132 (79%), Gaps = 6/132 (4%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDE 62
RKPVF KV+QL+PGT+GHTLTVKV+ +V+ +K R + R RI ECL+GDE
Sbjct: 18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E A+FTVKEDN
Sbjct: 78 TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137
Query: 123 NLSLIEYELVNV 134
NLSL+EYEL+NV
Sbjct: 138 NLSLVEYELINV 149
>gi|255553651|ref|XP_002517866.1| conserved hypothetical protein [Ricinus communis]
gi|223542848|gb|EEF44384.1| conserved hypothetical protein [Ricinus communis]
Length = 140
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 104/132 (78%), Gaps = 6/132 (4%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMV-LQKGRGDGTQV-----RQMRIAECLVGDE 62
RKPVF KV++L+PGT+GH LTVKV+++K V + K R + R RI+ECLVGDE
Sbjct: 7 RKPVFVKVEELKPGTTGHNLTVKVLNSKAVPVPKPRRAPMSLSVRPARPARISECLVGDE 66
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
T I+FTARN+QVDLM G TVILRNAKIDMFKGSMRLAVDKWGR+E EPA+F V+E N
Sbjct: 67 TASIVFTARNEQVDLMNPGATVILRNAKIDMFKGSMRLAVDKWGRIEATEPADFVVQETN 126
Query: 123 NLSLIEYELVNV 134
NLSL+EYELV V
Sbjct: 127 NLSLVEYELVTV 138
>gi|195607588|gb|ACG25624.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 164
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 106/136 (77%), Gaps = 3/136 (2%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A++ LRKPVFT VDQLRP T GHTLT +V++ + VL K T + + R+AECLVGD
Sbjct: 31 ADAAKPLRKPVFTTVDQLRPQTHGHTLTARVIAVRTVLDK---PSTHLGRTRVAECLVGD 87
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
TG ++ TARN+QVDL+K TTVI RNAKIDMFKG+MRLAVDKWGR+EV + + F V ED
Sbjct: 88 STGTVLVTARNEQVDLLKPDTTVIFRNAKIDMFKGTMRLAVDKWGRIEVTDSSVFKVNED 147
Query: 122 NNLSLIEYELVNVVEE 137
NN+SL+EYELV+V EE
Sbjct: 148 NNMSLVEYELVDVDEE 163
>gi|226532954|ref|NP_001150108.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|194701868|gb|ACF85018.1| unknown [Zea mays]
gi|195636808|gb|ACG37872.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
gi|413942546|gb|AFW75195.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
Length = 164
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/136 (63%), Positives = 106/136 (77%), Gaps = 3/136 (2%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
A++ LRKPVFT VDQLRP T GHTLT +V++ + VL K T + + R+AECLVGD
Sbjct: 31 ADAAKPLRKPVFTTVDQLRPQTHGHTLTARVIAVRTVLDK---PSTHLGRTRVAECLVGD 87
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
TG ++ TARN+QVDL+K TTVI RNAKIDMFKG+MRLAVDKWGR+EV + + F V ED
Sbjct: 88 STGTVLVTARNEQVDLLKPDTTVIFRNAKIDMFKGTMRLAVDKWGRIEVTDSSVFKVNED 147
Query: 122 NNLSLIEYELVNVVEE 137
NN+SL+EYELV+V EE
Sbjct: 148 NNMSLVEYELVDVDEE 163
>gi|357110962|ref|XP_003557284.1| PREDICTED: uncharacterized protein At4g28440-like [Brachypodium
distachyon]
Length = 182
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/131 (63%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
LRKPVFT VDQL P T GHTLT +VVS + VL KG + +R+ R+AECLVGD TG ++
Sbjct: 50 LRKPVFTTVDQLLPQTQGHTLTARVVSARTVLDKGPAAPSHLRRTRVAECLVGDHTGSVL 109
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVKEDNNLSL 126
FTARN+Q++++K G TVI RNA+IDMFKG+MRLAVDKWGR+EV E P F V EDNN+S
Sbjct: 110 FTARNNQIEMLKPGNTVIFRNARIDMFKGTMRLAVDKWGRIEVIEDPIGFKVNEDNNVSK 169
Query: 127 IEYELVNVVEE 137
+EYELV+V ++
Sbjct: 170 VEYELVDVSDK 180
>gi|159163414|pdb|1WJJ|A Chain A, Solution Structure Of Hypothetical Protein F20o9.120 From
Arabidopsis Thaliana
Length = 145
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 101/128 (78%), Gaps = 6/128 (4%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDE 62
RKPVF KV+QL+PGT+GHTLTVKV+ +V+ +K R + R RI ECL+GDE
Sbjct: 12 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 71
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
TG I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E A+FTVKEDN
Sbjct: 72 TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 131
Query: 123 NLSLIEYE 130
NLSL+EYE
Sbjct: 132 NLSLVEYE 139
>gi|297843192|ref|XP_002889477.1| hypothetical protein ARALYDRAFT_311471 [Arabidopsis lyrata subsp.
lyrata]
gi|297335319|gb|EFH65736.1| hypothetical protein ARALYDRAFT_311471 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 2/128 (1%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQK-GRGDGTQ-VRQMRIAECLVGDETGMI 66
RKPVF KV+QL+PGTSGHTL VKV+ + V R TQ +R RIAECL+GD+TG I
Sbjct: 15 RKPVFVKVNQLKPGTSGHTLIVKVLESNPVKPAIRRSSLTQSIRSPRIAECLIGDDTGCI 74
Query: 67 IFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSL 126
+FTARNDQVDLMK G TVILRNAKID+FK +MR+ VD+WGR+EV +P +F V NNLSL
Sbjct: 75 LFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMVVDRWGRIEVTDPVSFEVNRGNNLSL 134
Query: 127 IEYELVNV 134
IEYELV +
Sbjct: 135 IEYELVTL 142
>gi|15219562|ref|NP_171877.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
gi|4204306|gb|AAD10687.1| Hypothetical protein [Arabidopsis thaliana]
gi|332189495|gb|AEE27616.1| Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana]
Length = 143
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 98/127 (77%), Gaps = 3/127 (2%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVST---KMVLQKGRGDGTQVRQMRIAECLVGDETGM 65
RKPVF KVDQL+PGTSGHTL VKV+ + K ++K + RIAECL+GD+TG
Sbjct: 15 RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGC 74
Query: 66 IIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
I+FTARNDQVDLMK G TVILRNAKID+FK +MR+AVD+WGR+E+ P +F V NNLS
Sbjct: 75 ILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLS 134
Query: 126 LIEYELV 132
L+EYE++
Sbjct: 135 LVEYEVI 141
>gi|357135109|ref|XP_003569154.1| PREDICTED: uncharacterized protein At4g28440-like [Brachypodium
distachyon]
Length = 133
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 107/137 (78%), Gaps = 7/137 (5%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTK-MVLQKGRGDGTQVRQMRIAECLV 59
MA++ R+ FTK+D+LRP T GH L VKV+++K + Q+ Q RQMR+AECLV
Sbjct: 1 MADNGGARRQATFTKIDELRPSTHGHNLIVKVLNSKPITFQR-----PQPRQMRVAECLV 55
Query: 60 GDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTV 118
GDETG+++FTARN+QVD+MK G V +RNAK+DM+KGSMRLAVDKWG V+ AE P+ TV
Sbjct: 56 GDETGVVVFTARNEQVDVMKSGAIVEVRNAKVDMYKGSMRLAVDKWGIVKAAESPSELTV 115
Query: 119 KEDNNLSLIEYELVNVV 135
KEDNNLSLIE+E++ ++
Sbjct: 116 KEDNNLSLIEFEMITLM 132
>gi|147845662|emb|CAN80586.1| hypothetical protein VITISV_021819 [Vitis vinifera]
Length = 231
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 96/132 (72%), Gaps = 10/132 (7%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETG---- 64
RK VFTKVDQL+PGT GHTLTVKVVS+K VLQKGR +R IAECLVG G
Sbjct: 30 RKXVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLRHTCIAECLVGMRLGRSSS 89
Query: 65 ----MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
M +F +D+MK G TVILRNAKIDMFKGSMRLAVDKWG VEV E ANF VKE
Sbjct: 90 LLVMMKVFV--YILIDMMKPGATVILRNAKIDMFKGSMRLAVDKWGCVEVTEDANFVVKE 147
Query: 121 DNNLSLIEYELV 132
NNLSL+EYELV
Sbjct: 148 QNNLSLVEYELV 159
>gi|326529491|dbj|BAK04692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 99/128 (77%), Gaps = 9/128 (7%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
LRKPVFT +D+L+P T GHTLT +V+S +++ + +R+AECLVGD TG ++
Sbjct: 42 LRKPVFTTIDKLKPQTHGHTLTARVLSARVLDART--------SLRLAECLVGDPTGTVL 93
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFTVKEDNNLSL 126
FTARNDQ++++K G TVI RNA+IDMFK +MRLAVDKWGR+EV EPA F V EDNN+S
Sbjct: 94 FTARNDQIEMLKPGNTVIFRNARIDMFKDTMRLAVDKWGRIEVVEEPAGFKVNEDNNVSK 153
Query: 127 IEYELVNV 134
+EYELVNV
Sbjct: 154 VEYELVNV 161
>gi|146454762|gb|ABQ42047.1| DNA-binding related protein [Sonneratia ovata]
Length = 107
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 90/111 (81%), Gaps = 7/111 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K+ LRP SG TLTVKVV KMV KGR Q RI+ECLVGDETGMIIF ARNDQ
Sbjct: 4 KISDLRPLESGITLTVKVVDAKMVAPKGR-------QARISECLVGDETGMIIFVARNDQ 56
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
VD MKEG+T+ILRNAKI+M++GSMRLAVD+WGR+E +EPA+F VKED+NLS
Sbjct: 57 VDRMKEGSTLILRNAKIEMYRGSMRLAVDRWGRMEASEPASFAVKEDSNLS 107
>gi|146454764|gb|ABQ42048.1| DNA-binding related protein [Sonneratia apetala]
Length = 107
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 90/111 (81%), Gaps = 7/111 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K+ LRP SG TLTVKVV KMV KGR Q R++ECLVGDETGMIIF ARNDQ
Sbjct: 4 KISDLRPLESGITLTVKVVDAKMVAPKGR-------QARMSECLVGDETGMIIFVARNDQ 56
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
VD MKEG+T+ILRNAKI+M++GSMRLAVD+WGR+E +EPA+F VKED+NLS
Sbjct: 57 VDRMKEGSTLILRNAKIEMYRGSMRLAVDRWGRIEASEPASFAVKEDSNLS 107
>gi|146454760|gb|ABQ42046.1| DNA-binding related protein [Sonneratia caseolaris]
Length = 107
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/111 (69%), Positives = 90/111 (81%), Gaps = 7/111 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K+ LRP SG TLTVKVV KMV KGR Q RI+ECLVGDETGMIIF ARNDQ
Sbjct: 4 KISDLRPLESGITLTVKVVDAKMVAPKGR-------QARISECLVGDETGMIIFVARNDQ 56
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
VD MKEG+T+IL+NAKI+M++GSMRLAVD+WGR+E +EPA+F VKED+NLS
Sbjct: 57 VDRMKEGSTLILQNAKIEMYRGSMRLAVDRWGRIEASEPASFAVKEDSNLS 107
>gi|146454758|gb|ABQ42045.1| DNA-binding related protein [Sonneratia alba]
gi|241865208|gb|ACS68682.1| DNA-binding related protein [Sonneratia alba]
gi|241865441|gb|ACS68753.1| DNA-binding related protein [Sonneratia alba]
Length = 107
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 88/111 (79%), Gaps = 7/111 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K+ LRP SG TLTVKVV KMV KGR Q RI+ECLVGDETGMIIF ARNDQ
Sbjct: 4 KISDLRPLESGITLTVKVVDAKMVAPKGR-------QARISECLVGDETGMIIFVARNDQ 56
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
VD MKEG T+ILRNAKI+M++GSMRLAVD+WGR+E +EPA F VKED+NLS
Sbjct: 57 VDRMKEGGTLILRNAKIEMYRGSMRLAVDRWGRIEASEPAGFAVKEDSNLS 107
>gi|414875571|tpg|DAA52702.1| TPA: hypothetical protein ZEAMMB73_613650, partial [Zea mays]
Length = 104
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 79/89 (88%)
Query: 48 QVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGR 107
R RIAECLVGDETG+I+FTARNDQVDL+K TVILRNAKIDMFKGSMRLAVDKWGR
Sbjct: 16 HYRAPRIAECLVGDETGVIVFTARNDQVDLLKPDATVILRNAKIDMFKGSMRLAVDKWGR 75
Query: 108 VEVAEPANFTVKEDNNLSLIEYELVNVVE 136
+E EPA+FTVKEDNNLSL+EYELVNV E
Sbjct: 76 IEATEPASFTVKEDNNLSLVEYELVNVAE 104
>gi|326492518|dbj|BAK02042.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534344|dbj|BAJ89522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 128
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 100/126 (79%), Gaps = 2/126 (1%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTK-MVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
F KV++LRPGT GH L ++V+S+K +VL + G MRIAEC+VGD+TG+++FTAR
Sbjct: 3 FDKVEELRPGTYGHNLQLRVLSSKPVVLHRQHQGGRAGNNMRIAECIVGDDTGVVVFTAR 62
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVKEDNNLSLIEYE 130
N+QVD+MK G V R A++DM+KGSMRLAVDKWG ++ AE PA+F VKEDNN+SLIE+E
Sbjct: 63 NEQVDIMKPGAVVEARKARVDMYKGSMRLAVDKWGTLKAAESPADFKVKEDNNVSLIEFE 122
Query: 131 LVNVVE 136
L+ V++
Sbjct: 123 LMTVLQ 128
>gi|115465884|ref|NP_001056541.1| Os06g0103400 [Oryza sativa Japonica Group]
gi|113594581|dbj|BAF18455.1| Os06g0103400, partial [Oryza sativa Japonica Group]
Length = 111
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 92/112 (82%), Gaps = 6/112 (5%)
Query: 26 HTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGTTVI 85
HTLT +V+S +++L D R R+AECLVGD TG ++FTARN QVDL+K GTTVI
Sbjct: 5 HTLTARVLSARIIL-----DNPPPRA-RLAECLVGDNTGTVLFTARNQQVDLVKPGTTVI 58
Query: 86 LRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNVVEE 137
RNAKIDMFKG+MRLAVDKWGR+EV +PA+F VKEDNN+SL+EYELV+VV+E
Sbjct: 59 FRNAKIDMFKGTMRLAVDKWGRIEVTDPASFQVKEDNNVSLVEYELVDVVDE 110
>gi|384247304|gb|EIE20791.1| nucleic acid-binding protein [Coccomyxa subellipsoidea C-169]
Length = 154
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 96/126 (76%), Gaps = 5/126 (3%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL--QKGRGDGTQVRQMRIAECLVGDETGMI 66
R+PVFTK+DQLRP TSGH L VKV+ +VL Q R + T R IAECL+GDETG+I
Sbjct: 10 REPVFTKIDQLRPDTSGHNLVVKVIEANVVLTRQAPRPNTTAPR---IAECLIGDETGVI 66
Query: 67 IFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSL 126
I TARN+QVD+ ++G +ILRN+KIDM+KGSMRLAV +WG++E +F K D+NLSL
Sbjct: 67 ILTARNEQVDIAQKGEYLILRNSKIDMYKGSMRLAVTQWGKLESTHDRDFEPKLDHNLSL 126
Query: 127 IEYELV 132
+EYELV
Sbjct: 127 VEYELV 132
>gi|307107487|gb|EFN55730.1| hypothetical protein CHLNCDRAFT_17642, partial [Chlorella
variabilis]
Length = 131
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 4/130 (3%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQ-KGRGDGTQVRQMRIAECLVGDETGMII 67
R PVF KV+QLRP TSGH L VKVV +K+V+ RG ++ ++AEC VGDETG I+
Sbjct: 5 RAPVFGKVEQLRPDTSGHNLVVKVVDSKVVVDKPARGP---LKPQKVAECTVGDETGTIL 61
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
TARN+QV+LMK G+ V LRNAKIDMF+GSMRLAV++WG++E A +FT K D NLSL+
Sbjct: 62 LTARNEQVELMKPGSYVTLRNAKIDMFRGSMRLAVNQWGKMEAASGHSFTPKADFNLSLV 121
Query: 128 EYELVNVVEE 137
EYELV V +E
Sbjct: 122 EYELVPVRQE 131
>gi|296087675|emb|CBI34931.3| unnamed protein product [Vitis vinifera]
Length = 73
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/73 (91%), Positives = 70/73 (95%)
Query: 65 MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNL 124
MI+FTARNDQVDLMK TTVILRNAKIDMFKGSMRLAVDKWGRVEV EPA+FTVKEDNNL
Sbjct: 1 MIVFTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNL 60
Query: 125 SLIEYELVNVVEE 137
SL+EYELVNVVEE
Sbjct: 61 SLVEYELVNVVEE 73
>gi|452819931|gb|EME26981.1| replication factor A1 [Galdieria sulphuraria]
Length = 127
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 90/128 (70%), Gaps = 6/128 (4%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
LRKPVFTKV++L+PGT GH L V+V++ V++K R G + ++IAE L+ DETG ++
Sbjct: 3 LRKPVFTKVEKLQPGTQGHNLIVQVMNVGEVMEKVRPSGDK---LQIAEVLLADETGAVL 59
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA---NFTVKEDNNL 124
FTARN+Q+ L K+G V +RNAK++M +G +RL VDKWG ++ P K +NN+
Sbjct: 60 FTARNEQIKLFKKGECVTVRNAKVNMVRGFIRLVVDKWGAIKPPGPTEKLQGPPKVENNI 119
Query: 125 SLIEYELV 132
S IEYELV
Sbjct: 120 SNIEYELV 127
>gi|281200925|gb|EFA75139.1| hypothetical protein PPL_11213 [Polysphondylium pallidum PN500]
Length = 140
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 89/125 (71%), Gaps = 6/125 (4%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
L+K VFTKV+ L+P TSGH L +KV+S+K+V+ + + R+ I+E +VGDETG II
Sbjct: 19 LQKAVFTKVEHLKPMTSGHNLVLKVLSSKVVIDRNKD-----RKEFISEAVVGDETGTII 73
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFTVKEDNNLSL 126
T +N+Q D+++ G T+ILRN I +F G MRL V+ WG ++ A EPA+FTV N+LS
Sbjct: 74 LTVKNEQNDVVQPGNTIILRNGTIRVFNGFMRLYVNVWGNIKPAPEPADFTVNTANDLSA 133
Query: 127 IEYEL 131
IEYEL
Sbjct: 134 IEYEL 138
>gi|348673010|gb|EGZ12829.1| hypothetical protein PHYSODRAFT_546681 [Phytophthora sojae]
Length = 146
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
+E+ LR+ + KV L PG+ GH L ++VVS ++K R DGT RIAE ++ D
Sbjct: 5 SEAPRKLRRATYVKVQDLTPGSQGHNLVLQVVSIAPTVEKKRYDGTI---SRIAEAVMAD 61
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV-------AEPA 114
ETG + FTARNDQ+D++KE V++RN+ D+F G MRL V +WG++ + P
Sbjct: 62 ETGCVTFTARNDQIDMLKEELVVVVRNSNADIFNGFMRLNVTQWGKLSLHPDGIASTPPP 121
Query: 115 NFTVKEDNNLSLIEYELVNV 134
+V DNN+S +EYELV V
Sbjct: 122 PPSVNTDNNISAVEYELVTV 141
>gi|66815421|ref|XP_641727.1| hypothetical protein DDB_G0279209 [Dictyostelium discoideum AX4]
gi|60469766|gb|EAL67753.1| hypothetical protein DDB_G0279209 [Dictyostelium discoideum AX4]
Length = 132
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
L +P F+KV L+P ++GH L +KVVSTK+V++K + ++ I+E +VGDETG II
Sbjct: 10 LTQPTFSKVSSLKPMSTGHNLILKVVSTKVVIEKNKD-----KKEMISEAVVGDETGTII 64
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFTVKEDNNLSL 126
T +N+Q D+++ G T+ILRN I +F G MRL V+ WG ++++ P++F V N+LS
Sbjct: 65 LTVKNEQNDVVQPGNTIILRNGIIKVFNGFMRLYVNIWGNIKLSPTPSDFVVNNSNDLSA 124
Query: 127 IEYEL 131
IEYEL
Sbjct: 125 IEYEL 129
>gi|301102097|ref|XP_002900136.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102288|gb|EEY60340.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 146
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 10/140 (7%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
+E LR+ + KV L PG+ GH L ++VVS ++K R DGT RIAE ++ D
Sbjct: 5 SEVPRKLRRATYVKVQDLTPGSQGHNLVLQVVSIAPTVEKKRYDGTI---SRIAEAVLAD 61
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGR-------VEVAEPA 114
ETG + TARNDQ+D++KEG V++RN+ D+F G MRL V +WG+ V PA
Sbjct: 62 ETGCVTLTARNDQIDMLKEGLDVVVRNSNADIFNGFMRLNVTQWGKLSPHPDGVASTPPA 121
Query: 115 NFTVKEDNNLSLIEYELVNV 134
V D+N+S +EYELV V
Sbjct: 122 PPKVNTDSNISAVEYELVTV 141
>gi|255073183|ref|XP_002500266.1| predicted protein [Micromonas sp. RCC299]
gi|226515528|gb|ACO61524.1| predicted protein [Micromonas sp. RCC299]
Length = 134
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN-DQ 74
VD LRPGT+G L VKV+ K V+ K R DG+ VR I EC VGD +G+I+F+A+N Q
Sbjct: 13 VDSLRPGTTGLNLVVKVLDAKEVMNKKRPDGSSVR---IVECTVGDASGVILFSAKNKQQ 69
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRV-EVAEPANFTVKEDNNLSLIEYELV 132
V+ MK GTTV + N KIDM +G+MRLAVD+WG + E + DNNLSL+ YELV
Sbjct: 70 VETMKVGTTVRVHNGKIDMIRGTMRLAVDQWGLLKEESGGEEVLPNRDNNLSLVVYELV 128
>gi|413951171|gb|AFW83820.1| hypothetical protein ZEAMMB73_247725 [Zea mays]
Length = 189
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 59/74 (79%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 83 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 142
Query: 61 DETGMIIFTARNDQ 74
DETG+I+FTARNDQ
Sbjct: 143 DETGIIVFTARNDQ 156
>gi|376339976|gb|AFB34499.1| hypothetical protein CL4481Contig1_04, partial [Larix decidua]
Length = 60
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 58/60 (96%)
Query: 77 LMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNVVE 136
+MKEG T+I+RNAKIDMFKG+MRLAVDKWGR+EV+EPANFTVKEDNNLS +EYELVNVVE
Sbjct: 1 VMKEGATLIIRNAKIDMFKGTMRLAVDKWGRIEVSEPANFTVKEDNNLSAVEYELVNVVE 60
>gi|223944007|gb|ACN26087.1| unknown [Zea mays]
Length = 107
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 59/74 (79%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MA R+P FTKVDQLRPGT GH L +KVV +KMV+Q+GR G Q RQMRIAECLVG
Sbjct: 1 MAADSGARRQPSFTKVDQLRPGTHGHNLILKVVDSKMVVQRGREGGPQGRQMRIAECLVG 60
Query: 61 DETGMIIFTARNDQ 74
DETG+I+FTARNDQ
Sbjct: 61 DETGIIVFTARNDQ 74
>gi|361069727|gb|AEW09175.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|361069729|gb|AEW09176.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|376339978|gb|AFB34500.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339980|gb|AFB34501.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339982|gb|AFB34502.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339984|gb|AFB34503.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339986|gb|AFB34504.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339988|gb|AFB34505.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339990|gb|AFB34506.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339992|gb|AFB34507.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339994|gb|AFB34508.1| hypothetical protein CL4481Contig1_04, partial [Pinus cembra]
gi|376339996|gb|AFB34509.1| hypothetical protein CL4481Contig1_04, partial [Pinus mugo]
gi|376339998|gb|AFB34510.1| hypothetical protein CL4481Contig1_04, partial [Pinus mugo]
gi|376340000|gb|AFB34511.1| hypothetical protein CL4481Contig1_04, partial [Pinus mugo]
gi|376340002|gb|AFB34512.1| hypothetical protein CL4481Contig1_04, partial [Pinus mugo]
gi|383147340|gb|AFG55431.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147341|gb|AFG55432.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147342|gb|AFG55433.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147343|gb|AFG55434.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147344|gb|AFG55435.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147345|gb|AFG55436.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147346|gb|AFG55437.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147347|gb|AFG55438.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147348|gb|AFG55439.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147349|gb|AFG55440.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147350|gb|AFG55441.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147351|gb|AFG55442.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147352|gb|AFG55443.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147353|gb|AFG55444.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147354|gb|AFG55445.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
gi|383147355|gb|AFG55446.1| Pinus taeda anonymous locus CL4481Contig1_04 genomic sequence
Length = 60
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 57/60 (95%)
Query: 77 LMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNVVE 136
+MKEG T+I+RNAKIDMFKG+MRLAVDKWGR+EV EPANFTVKEDNNLS +EYELVN+VE
Sbjct: 1 VMKEGATLIIRNAKIDMFKGTMRLAVDKWGRIEVTEPANFTVKEDNNLSAVEYELVNIVE 60
>gi|357492927|ref|XP_003616752.1| DNA-binding related protein [Medicago truncatula]
gi|355518087|gb|AES99710.1| DNA-binding related protein [Medicago truncatula]
Length = 277
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 9/125 (7%)
Query: 11 PVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
P+FTKV LRP +T+KVV+ K V KG M + E LVGDETG+II A
Sbjct: 111 PLFTKVQDLRPEMENINITLKVVNVKKVSSKG--------HMPVTESLVGDETGIIILRA 162
Query: 71 RN-DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEY 129
D+++ +KEG+T++L AKI M++GSMRL V + +E A PA FT+KED NLSLIEY
Sbjct: 163 VGADKINRVKEGSTIVLHKAKIIMYRGSMRLGVCRAEDIEEAPPAAFTIKEDCNLSLIEY 222
Query: 130 ELVNV 134
E + V
Sbjct: 223 ERIQV 227
>gi|159470035|ref|XP_001693165.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277423|gb|EDP03191.1| predicted protein [Chlamydomonas reinhardtii]
Length = 123
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 82/125 (65%), Gaps = 10/125 (8%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
+ V LRP TLTVKV+ V+ + RG + +++AECLV D TG+++F ARN+
Sbjct: 3 STVVSLRPDAKNLTLTVKVLEATTVMTRARGP--KAPSIKVAECLVADSTGVVVFVARNE 60
Query: 74 QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE----VAEPANFTVKEDNNLSLIEY 129
Q D+ +G T+ L+ AK++MF+GSMRLAVD G V+ ++EP N T NN+SL+E+
Sbjct: 61 QADVAVKGATITLKGAKVEMFRGSMRLAVDAAGTVQAGGDLSEPVNTT----NNMSLLEF 116
Query: 130 ELVNV 134
ELV V
Sbjct: 117 ELVTV 121
>gi|328871273|gb|EGG19644.1| inositol-3-phosphate synthase [Dictyostelium fasciculatum]
Length = 686
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 88/134 (65%), Gaps = 6/134 (4%)
Query: 3 ESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDE 62
++ L K VFTKVDQLRP T GH L +KV++TK+V+++ + ++ I+E +VGDE
Sbjct: 550 DNPPPLAKAVFTKVDQLRPMTQGHNLVLKVLNTKIVIERDKE-----KKELISEAVVGDE 604
Query: 63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFTVKED 121
TG I+ T +N+Q ++++ G T+ILRN I +F G MRL V+ WG +++A EPA F V
Sbjct: 605 TGTIVLTVKNEQNEVVQPGNTIILRNGIIKVFNGFMRLYVNIWGNIKMAPEPATFEVNLI 664
Query: 122 NNLSLIEYELVNVV 135
+ I Y + N++
Sbjct: 665 KDPRDINYRITNLI 678
>gi|302837532|ref|XP_002950325.1| hypothetical protein VOLCADRAFT_74628 [Volvox carteri f.
nagariensis]
gi|300264330|gb|EFJ48526.1| hypothetical protein VOLCADRAFT_74628 [Volvox carteri f.
nagariensis]
Length = 122
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 80/121 (66%), Gaps = 3/121 (2%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
T + LRP TLTVKVV V+ + RG + +++AECLV D TG+I+F ARN+
Sbjct: 3 TSIISLRPEQKNLTLTVKVVDATTVMSRQRGP--KAPAVKVAECLVADSTGVIVFVARNE 60
Query: 74 QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVN 133
QVD+ ++G T+ L+ AK+DMF+GSMRL+V+ G+VE V NN+SL+E+ELV
Sbjct: 61 QVDVAQKGATITLKGAKVDMFRGSMRLSVE-GGQVEAGGDLQGPVNTSNNMSLLEFELVT 119
Query: 134 V 134
V
Sbjct: 120 V 120
>gi|376339972|gb|AFB34497.1| hypothetical protein CL4481Contig1_04, partial [Abies alba]
gi|376339974|gb|AFB34498.1| hypothetical protein CL4481Contig1_04, partial [Abies alba]
Length = 60
Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/60 (81%), Positives = 56/60 (93%)
Query: 77 LMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNVVE 136
+MKEG T+I+RNAKIDMFKG+MRLAVDKWGR+EV EPA+FTVKEDNNLS +EYELVNV E
Sbjct: 1 VMKEGATLIIRNAKIDMFKGTMRLAVDKWGRIEVTEPADFTVKEDNNLSAVEYELVNVAE 60
>gi|325183338|emb|CCA17796.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 147
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 10/137 (7%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETG 64
K+ LR + KV+ + PGT GH L +++VS ++ K R DG R+AE +VGDETG
Sbjct: 7 KTTLRPASYVKVEDVTPGTHGHNLVLRIVSVTPLVAKKRQDG---NAPRMAEAVVGDETG 63
Query: 65 MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV------AEPANFT- 117
++ TARN+Q+D +KEG V++RN D++ G +RL V +WG++ + P T
Sbjct: 64 IVTLTARNEQIDSLKEGGDVVIRNCNADVYNGYLRLNVTRWGKITPYPDGVDSTPNPPTE 123
Query: 118 VKEDNNLSLIEYELVNV 134
+ +N+ S IEYELV V
Sbjct: 124 INMENDFSAIEYELVTV 140
>gi|359478031|ref|XP_003632056.1| PREDICTED: uncharacterized protein At4g28440 [Vitis vinifera]
Length = 71
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYEL 131
+ VD++K G TVIL AKIDMFKGSMRLAVDKWGRVEV + ANF VKE NNLSL+EYEL
Sbjct: 6 HHAVDMIKPGATVILHKAKIDMFKGSMRLAVDKWGRVEVTKDANFVVKEQNNLSLVEYEL 65
Query: 132 VNVVEE 137
VNV+EE
Sbjct: 66 VNVLEE 71
>gi|330843157|ref|XP_003293528.1| hypothetical protein DICPUDRAFT_42156 [Dictyostelium purpureum]
gi|325076134|gb|EGC29947.1| hypothetical protein DICPUDRAFT_42156 [Dictyostelium purpureum]
Length = 116
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 80/118 (67%), Gaps = 6/118 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV L+P +SGH L +KV+ST++V++K ++ I+E +VGDETG+I T +N+Q
Sbjct: 1 KVSSLKPLSSGHNLVLKVISTRVVIEKDID-----KKEIISEAVVGDETGVITLTVKNEQ 55
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEP-ANFTVKEDNNLSLIEYEL 131
D+++ G T+ILRN I +F G MRL VD WG ++++ A+F V N+LS IEYEL
Sbjct: 56 NDVVQPGNTIILRNGLIKVFNGYMRLKVDIWGNIKLSPTEADFIVDTSNDLSAIEYEL 113
>gi|147788226|emb|CAN71591.1| hypothetical protein VITISV_015930 [Vitis vinifera]
Length = 105
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 53/66 (80%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RK VFTKVDQL+PGT GHTLTVKVVS+K VLQ GR +R RIAECLVGDET IIF
Sbjct: 26 RKSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGRLVLQHLRHTRIAECLVGDETRAIIF 85
Query: 69 TARNDQ 74
TARNDQ
Sbjct: 86 TARNDQ 91
>gi|357492921|ref|XP_003616749.1| DNA-binding related protein [Medicago truncatula]
gi|355518084|gb|AES99707.1| DNA-binding related protein [Medicago truncatula]
Length = 135
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 13/129 (10%)
Query: 11 PVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG---DETGMII 67
PVF KV LRP LT+KV++ K V +KG M + E LVG DETG+II
Sbjct: 5 PVFIKVHDLRPEMEDVNLTLKVLNVKDVSRKG--------SMPVTESLVGVEYDETGIII 56
Query: 68 FTA-RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGR-VEVAEPANFTVKEDNNLS 125
F A D+++ +KEG+T+++R A+I M+KGSMRL+V + VE EPA+F VKED N S
Sbjct: 57 FRAIGGDKINRVKEGSTIVVRKARILMYKGSMRLSVRRAEDIVEAPEPASFIVKEDCNWS 116
Query: 126 LIEYELVNV 134
LIE+E V V
Sbjct: 117 LIEFERVQV 125
>gi|147806098|emb|CAN72210.1| hypothetical protein VITISV_012254 [Vitis vinifera]
Length = 121
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 53/66 (80%)
Query: 9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIF 68
RK VFTKVDQL+PGT GHTLTVKVVS+K VLQ GR +R RIAECLVGDET IIF
Sbjct: 26 RKSVFTKVDQLKPGTGGHTLTVKVVSSKTVLQNGRLVLQHLRHTRIAECLVGDETRAIIF 85
Query: 69 TARNDQ 74
TARNDQ
Sbjct: 86 TARNDQ 91
>gi|403371191|gb|EJY85476.1| hypothetical protein OXYTRI_16662 [Oxytricha trifallax]
Length = 135
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 4/130 (3%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETG 64
K L+KPVF + L PGT + + +KV + L+K R DGTQ+RQ AE +VGD+ G
Sbjct: 8 KRTLKKPVFITMQNLEPGTRVN-MHLKVEKVTVTLEKKRYDGTQIRQ---AEAIVGDQYG 63
Query: 65 MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNL 124
+ AR++Q+D++KEG + +RNA ++ +RL VD+W ++E ++ +V N
Sbjct: 64 CVKLIARDNQLDVVKEGAVITVRNAHANVVNEHLRLEVDRWAKIEASKERVDSVNLATNH 123
Query: 125 SLIEYELVNV 134
S +EYELV+V
Sbjct: 124 SDVEYELVSV 133
>gi|326503270|dbj|BAJ99260.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 133
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
M E L+KP F KV+++ PG G+ + +KVVS K + DG + ++IAE + G
Sbjct: 1 MVEPTRTLKKPHFIKVEKIGPGEHGYNVYLKVVSVKHSTTT-KADG---KDLKIAEAVCG 56
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF--TV 118
DET + A D D KEG + +RN + ++FK MRL +D+WG+V + EP+ V
Sbjct: 57 DETATVNVRAIGDNADFFKEGDIISIRNGRSEVFKEKMRLEIDRWGKV-IREPSAKIDKV 115
Query: 119 KEDNNLSLIEYEL 131
E+ NLS + YE+
Sbjct: 116 NENKNLSSVSYEV 128
>gi|414875570|tpg|DAA52701.1| TPA: hypothetical protein ZEAMMB73_613650 [Zea mays]
Length = 97
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMV---LQKGRGDGTQVRQMRIAECLVGD 61
K LRKPVFTKVDQL+PGT+GHTLTVKVVS V + G R RIAECLVGD
Sbjct: 12 KPALRKPVFTKVDQLKPGTNGHTLTVKVVSATPVPGRARPGAPAAASSRAPRIAECLVGD 71
Query: 62 ETGMIIFTARNDQVDLM 78
ETG+I+FTARNDQV +M
Sbjct: 72 ETGVIVFTARNDQVRVM 88
>gi|383100976|emb|CCD74519.1| unknown [Arabidopsis halleri subsp. halleri]
Length = 110
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 76/140 (54%), Gaps = 33/140 (23%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
MAE K LRKPVFTK +V++ G+ IAECLVG
Sbjct: 1 MAEVKPSLRKPVFTKR-----------------GLPLVIRHGK--------CHIAECLVG 35
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE---VAEPANFT 117
DETGMIIFTARN+QV+LMKEG N + R+ + G+V VA P + T
Sbjct: 36 DETGMIIFTARNEQVNLMKEGN-----NPAECKDRHVQRINETRSGQVGWCCVAGPVDIT 90
Query: 118 VKEDNNLSLIEYELVNVVEE 137
+KEDNNLS IE + VN+VEE
Sbjct: 91 MKEDNNLSQIESDAVNIVEE 110
>gi|238007476|gb|ACR34773.1| unknown [Zea mays]
gi|414875568|tpg|DAA52699.1| TPA: hypothetical protein ZEAMMB73_613650 [Zea mays]
Length = 151
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMV---LQKGRGDGTQVRQMRIAECLVGD 61
K LRKPVFTKVDQL+PGT+GHTLTVKVVS V + G R RIAECLVGD
Sbjct: 12 KPALRKPVFTKVDQLKPGTNGHTLTVKVVSATPVPGRARPGAPAAASSRAPRIAECLVGD 71
Query: 62 ETGMIIFTARNDQ 74
ETG+I+FTARNDQ
Sbjct: 72 ETGVIVFTARNDQ 84
>gi|290995869|ref|XP_002680505.1| hypothetical protein NAEGRDRAFT_78733 [Naegleria gruberi]
gi|284094126|gb|EFC47761.1| hypothetical protein NAEGRDRAFT_78733 [Naegleria gruberi]
Length = 440
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 24/134 (17%)
Query: 8 LRKPVFTKVDQLRPGTS------GHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
LR P F KV + PG S G + K+VS ++V +Q + +AE VGD
Sbjct: 306 LRIPTFCKVKDVEPGQSFYPGQGGFNIVCKIVSIEIV--------SQTKGHAVAEVTVGD 357
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA------- 114
ETG ++ T R +Q+ K G+++I+RN+KI +FK +RL +D WG+++ E
Sbjct: 358 ETGCVVLTTRTEQLGEAKVGSSIIVRNSKISLFKKKLRLKIDMWGKIQSFEEGKKAISVP 417
Query: 115 ---NFTVKEDNNLS 125
+FTVK D NLS
Sbjct: 418 LSDDFTVKTDKNLS 431
>gi|403368111|gb|EJY83887.1| hypothetical protein OXYTRI_18377 [Oxytricha trifallax]
Length = 162
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
Query: 5 KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETG 64
++ L+KP + V + P S + +KV S MV +K + DG+ VR IAE + GD TG
Sbjct: 2 EASLQKPTYITVKLIEP-ESRVFMHLKVQSINMVSEKKKFDGSVVR---IAEAVAGDSTG 57
Query: 65 MIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNL 124
++ RN+Q+D++KEG T+ + NA + +++ +DKW R+ ++ A +V E+N++
Sbjct: 58 VVTIIIRNEQLDIVKEGATIQVMNALAKVQNKFLKIDIDKWSRIVPSDQAIDSVNEENDI 117
Query: 125 SLIEYELVN 133
S +EYELV+
Sbjct: 118 SKVEYELVD 126
>gi|388499918|gb|AFK38025.1| unknown [Medicago truncatula]
Length = 49
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/40 (85%), Positives = 38/40 (95%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQ 40
MAE+K GLRKP FTKV+QLRPGTSGHTLTVKVV+TKMV+Q
Sbjct: 1 MAEAKPGLRKPTFTKVEQLRPGTSGHTLTVKVVNTKMVMQ 40
>gi|224004644|ref|XP_002295973.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586005|gb|ACI64690.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 586
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 8/103 (7%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
F ++L P G L V V +V+ K R D T+V +AE VGD TG I AR+
Sbjct: 145 FPHSNRLTPPRDGFNLCVLVGKVDLVVDKLRVDSTRVL---VAEVSVGDSTGSISLRARD 201
Query: 73 DQVDLM----KEGTTVILRNAKIDMFKGS-MRLAVDKWGRVEV 110
DQ+DL+ KEG V+LRN +++++G +RL V KWG++ V
Sbjct: 202 DQIDLLKQVSKEGGAVVLRNCTMELYQGRFLRLVVGKWGKINV 244
>gi|221506098|gb|EEE31733.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 497
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
F V L P + G L VKVVS K V+ + R + R R +VGDE+ +I +
Sbjct: 335 FKSVQDLEPTSKGLNLRVKVVSPK-VVDRDRTFPSG-RTSREGHMVVGDESAVITLKLVD 392
Query: 73 DQVDLMK-EGTTVILRNAKIDMFKGSMRLAVDKWGRV------EVAEPANFTVKEDNNLS 125
Q++L EGT +++RN I M +G M+L VD+WG++ E NFTV ++S
Sbjct: 393 QQMELPDVEGTPLLIRNGLISMEEGHMKLVVDRWGKIISDIPEAEKESFNFTVNSARDMS 452
Query: 126 LIEYELVNVVEE 137
EYELV + E+
Sbjct: 453 ATEYELVVLKED 464
>gi|237835859|ref|XP_002367227.1| hypothetical protein TGME49_048810 [Toxoplasma gondii ME49]
gi|211964891|gb|EEB00087.1| hypothetical protein TGME49_048810 [Toxoplasma gondii ME49]
Length = 497
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
F V L P + G L VKVVS K V+ + R + R R +VGDE+ +I +
Sbjct: 335 FKSVQDLEPTSKGLNLRVKVVSPK-VVDRDRTFPSG-RTSREGHMVVGDESAVITLKLVD 392
Query: 73 DQVDLMK-EGTTVILRNAKIDMFKGSMRLAVDKWGRV------EVAEPANFTVKEDNNLS 125
Q++L EGT +++RN I M +G M+L VD+WG++ E NFTV ++S
Sbjct: 393 QQMELPDVEGTPLLIRNGLISMEEGHMKLVVDRWGKIISDIPEAEKESFNFTVNSARDMS 452
Query: 126 LIEYELVNVVEE 137
EYELV + E+
Sbjct: 453 ATEYELVVLKED 464
>gi|221484847|gb|EEE23137.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 497
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
F V L P + G L VKVVS K V+ + R + R R +VGDE+ +I +
Sbjct: 335 FKSVQDLEPTSKGLNLRVKVVSPK-VVDRDRTFPSG-RTSREGHMVVGDESAVITLKLVD 392
Query: 73 DQVDLMK-EGTTVILRNAKIDMFKGSMRLAVDKWGRV------EVAEPANFTVKEDNNLS 125
Q++L EGT +++RN I M +G M+L VD+WG++ E NFTV ++S
Sbjct: 393 QQMELPDVEGTPLLIRNGLISMEEGHMKLVVDRWGKIISDIPEAEKESFNFTVNSARDMS 452
Query: 126 LIEYELVNVVEE 137
EYELV + E+
Sbjct: 453 ATEYELVVLKED 464
>gi|413951168|gb|AFW83817.1| hypothetical protein ZEAMMB73_247725 [Zea mays]
Length = 45
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Query: 93 MFKGSMRLAVDKWGRVEVAE-PANFTVKEDNNLSLIEYELVNVVE 136
MFKGSMRLAVDKWG V+ AE A +TVKEDNNLSLIE+ELV V E
Sbjct: 1 MFKGSMRLAVDKWGIVKAAESSAEWTVKEDNNLSLIEFELVTVTE 45
>gi|219127786|ref|XP_002184109.1| DNA binding protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404340|gb|EEC44287.1| DNA binding protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 406
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 18 QLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDL 77
+L+P G+ L V V ++V+ K R DG++VR +AE VGDETG + AR++Q+D
Sbjct: 84 RLQPPRGGYNLCVLVGKVEVVVDKYRVDGSRVR---LAEVEVGDETGTVSLRARDEQIDG 140
Query: 78 MKE----GTTVILRNAKIDMFKG-SMRLAVDKWGR-------VEVAEPANFTVKEDNNLS 125
+ E V+LRN +++++G +RLA+ KWG+ + P + D N S
Sbjct: 141 LTEVSQRAGAVVLRNCTLELYQGKHIRLAITKWGKLNSFPDQIASTPPPPSKMNHDRNFS 200
Query: 126 LIEYELV 132
LI+ +V
Sbjct: 201 LIDLSMV 207
>gi|357490373|ref|XP_003615474.1| OB-fold nucleic acid binding domain containing protein [Medicago
truncatula]
gi|355516809|gb|AES98432.1| OB-fold nucleic acid binding domain containing protein [Medicago
truncatula]
Length = 258
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV-AEPANFTVKEDNNLSL 126
F ++N+QVD++K+G+T+ L AKI++ SM L V G ++V E A FTVKEDNN+S
Sbjct: 179 FESQNNQVDIVKKGSTLKLYKAKINIMNDSMELIVPAHGNIQVQQESATFTVKEDNNMST 238
Query: 127 IEYELVNV 134
I YE+V V
Sbjct: 239 IRYEVVEV 246
>gi|401413296|ref|XP_003886095.1| hypothetical protein NCLIV_064950 [Neospora caninum Liverpool]
gi|325120515|emb|CBZ56069.1| hypothetical protein NCLIV_064950 [Neospora caninum Liverpool]
Length = 505
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 15/144 (10%)
Query: 2 AESKSGLRKPV------FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIA 55
AE+++ +PV F + L P + G L VKVVS K V+ + R + R R
Sbjct: 328 AEAEAKSPRPVQKAVATFKSIQDLEPTSKGLNLRVKVVSPK-VVDRDRTFPSG-RTSREG 385
Query: 56 ECLVGDETGMIIFTARNDQVDLM-KEGTTVILRNAKIDMFKGSMRLAVDKWGRV--EVAE 112
+VGD+ +I + Q++L EGT +++RN I M +G M+L VD+WG++ E+ E
Sbjct: 386 HMVVGDDGAVITLKLVDQQMELPDAEGTPLLIRNGLISMEEGHMKLVVDRWGKIISEIPE 445
Query: 113 PA----NFTVKEDNNLSLIEYELV 132
FTV ++S EYELV
Sbjct: 446 AEKDSFKFTVNGARDMSATEYELV 469
>gi|134037090|gb|ABO47885.1| hypothetical protein Tb10.6k15.3460 [Alexandrium fundyense]
Length = 433
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Query: 8 LRKPVFTKVDQ-LRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMI 66
LRKP F KV + ++P G L VK + ++ + E LVGD+TG++
Sbjct: 311 LRKPKFGKVKKGVQPDAKGLNLYVKCMKAPEAVEGSP---------EVKEVLVGDDTGLV 361
Query: 67 IFTARND-QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF---TVKEDN 122
+ + R+D D+ K G + ++NA + M KG +R+ +DKW ++ A+ + V E
Sbjct: 362 MLSIRSDTHADVCKAGAALRVQNAHVKMIKGYIRVVLDKWAVLKEADASALDFEAVDETA 421
Query: 123 NLSLIEYE 130
N+S +EYE
Sbjct: 422 NVSAVEYE 429
>gi|429217156|ref|YP_007175146.1| OB-fold nucleic acid binding protein [Caldisphaera lagunensis DSM
15908]
gi|429133685|gb|AFZ70697.1| OB-fold nucleic acid binding protein [Caldisphaera lagunensis DSM
15908]
Length = 138
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV++L P ++ ++VKV+ DG ++++ LVGDE+G II T ++
Sbjct: 6 KVNELAPKSAVEEISVKVIKVSEPRNVFGKDGMS---HKVSDVLVGDESGTIIMTLWDNS 62
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDK-WGRVEVAEPANFTVKEDNNLS 125
++ +KEG T+ ++NA + FKGSMRL+++K G + V+E V NN+S
Sbjct: 63 INKVKEGETINIKNAFVSTFKGSMRLSLNKNNGSITVSEKEIENVNTGNNMS 114
>gi|119719124|ref|YP_919619.1| single-stranded DNA-binding protein [Thermofilum pendens Hrk 5]
gi|119524244|gb|ABL77616.1| conserved hypothetical protein [Thermofilum pendens Hrk 5]
Length = 142
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQ-KGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
K+ + P T ++T KV++ Q R DG++ R+A+ LVGDETG+ + TA ++
Sbjct: 12 KIADITPSTRRFSVTFKVLNVGDEKQITSRRDGSE---HRVADVLVGDETGVALLTAWDN 68
Query: 74 QVDLMKE--GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYE 130
++D + G TV L N + +++G +RL + ++G ++ +E V E NN+S E+E
Sbjct: 69 EIDEFRNMVGETVSLVNGYVSLYQGKLRLGLGRFGSIKPSETKIEEVNEGNNISEKEFE 127
>gi|397599106|gb|EJK57349.1| hypothetical protein THAOC_22618 [Thalassiosira oceanica]
Length = 457
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Query: 54 IAECLVGDETGMIIFTARNDQVDLMK----EGTTVILRNAKIDMFKGS-MRLAVDKWGRV 108
+AE VGDETG + AR+DQ+DL++ + ++LRNA+I++++G +RLAV KWG++
Sbjct: 119 VAEVEVGDETGSVSLRARDDQIDLLRKVSHDNGAIVLRNAQIELYQGRYLRLAVSKWGKM 178
Query: 109 EVAEPANFTVKEDNNLSL---IEYELVNV 134
E A P D L+ + Y LV++
Sbjct: 179 E-AYPDGIESTPDPPLTRNRSLNYSLVDL 206
>gi|315427202|dbj|BAJ48816.1| replication factor A1 [Candidatus Caldiarchaeum subterraneum]
gi|315427240|dbj|BAJ48853.1| replication factor A1 [Candidatus Caldiarchaeum subterraneum]
gi|343485818|dbj|BAJ51472.1| replication factor A1 [Candidatus Caldiarchaeum subterraneum]
Length = 142
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQ--MRIAECLVGDETGMIIFTA 70
K+ L P + G L K+V + R +Q Q R+ E L+ DETG I
Sbjct: 4 LVKIGSLTPRSRGVNLVAKIVEKP----EPRVVSSQYDQSEHRLTEALIADETGAITLVL 59
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
+D +DL+ EG ++ + N I +F+G M+L + K+G++E +E V +NNLS
Sbjct: 60 WDDNIDLVNEGDSIKVVNGFIKLFRGKMQLNLGKFGKIEPSEEPVTEVNTENNLS 114
>gi|432328198|ref|YP_007246342.1| OB-fold nucleic acid binding protein [Aciduliprofundum sp.
MAR08-339]
gi|432134907|gb|AGB04176.1| OB-fold nucleic acid binding protein [Aciduliprofundum sp.
MAR08-339]
Length = 135
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQ---MRIAECLVGDETGMIIFT 69
TK+ L P +V VL KG + + E +VGDETG II +
Sbjct: 4 LTKIKDLNPNAK------RVNVLAKVLHKGEPKEINTKYGETKHVTEAIVGDETGTIIMS 57
Query: 70 ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEY 129
N+Q DL+ EG T+ + N I + +G MRL V K+G ++ +E V E ++S E+
Sbjct: 58 LWNEQADLVDEGETIYVDNGYISLVRGHMRLNVGKYGSIKKSEEEIGEVNESLDMSAEEH 117
Query: 130 E 130
E
Sbjct: 118 E 118
>gi|302348560|ref|YP_003816198.1| single-strand DNA-binding protein [Acidilobus saccharovorans
345-15]
gi|302328972|gb|ADL19167.1| single-strand DNA-binding protein [Acidilobus saccharovorans
345-15]
Length = 129
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V L PG + +LTVKVV + DG+ R+A+ LVGDE+G I+ T +
Sbjct: 2 QVKDLAPGVNVDSLTVKVVKVEEPRSVSGRDGST---HRVADALVGDESGSILMTLWDRN 58
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
+D ++ G + +RN + FKG MRL + + G + ++ V NNLS
Sbjct: 59 IDSVRPGAVITVRNGFVGTFKGHMRLNLGRGGTLSESDAQIENVNTSNNLS 109
>gi|428184891|gb|EKX53745.1| hypothetical protein GUITHDRAFT_100716 [Guillardia theta CCMP2712]
Length = 118
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 23 TSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGT 82
++G +L KVV ++ +Q G + + + L+GDETG I+ A ++ ++ G+
Sbjct: 13 SAGVSLKAKVV--RVCVQ---GRAGEEHEGGYGDVLIGDETGCILLLAAGAELGMLTPGS 67
Query: 83 TVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
+V+LRN I++ MRL + +WG +E EP T + +N+LS
Sbjct: 68 SVLLRNVSIEVLHQRMRLTIGRWGSMEPLEPG-LTCELENDLS 109
>gi|383151205|gb|AFG57636.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151207|gb|AFG57637.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151209|gb|AFG57638.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151211|gb|AFG57639.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151213|gb|AFG57640.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151215|gb|AFG57641.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151217|gb|AFG57642.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151219|gb|AFG57643.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151221|gb|AFG57644.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151223|gb|AFG57645.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151225|gb|AFG57646.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151227|gb|AFG57647.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151229|gb|AFG57648.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151231|gb|AFG57649.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151233|gb|AFG57650.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151235|gb|AFG57651.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
gi|383151237|gb|AFG57652.1| Pinus taeda anonymous locus 2_4754_02 genomic sequence
Length = 33
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 105 WGRVEVAEPANFTVKEDNNLSLIEYELVNVVEE 137
WGR+EV EPA F+VKE+NNLSL+EYELVNV E+
Sbjct: 1 WGRIEVTEPAEFSVKEENNLSLVEYELVNVQED 33
>gi|254167499|ref|ZP_04874351.1| OB-fold nucleic acid binding domain protein [Aciduliprofundum
boonei T469]
gi|197623762|gb|EDY36325.1| OB-fold nucleic acid binding domain protein [Aciduliprofundum
boonei T469]
Length = 137
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQ---MRIAECLVGDETGMIIFT 69
TK+ L P V V++ VL KG + + E +VGDETG II +
Sbjct: 4 LTKIKDLNPNAK----RVNVLAK--VLHKGEPKEINTKYGETKHVTEAVVGDETGTIIMS 57
Query: 70 ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
N+Q D++ EG T+ + N I + +G MRL V K+G ++
Sbjct: 58 LWNEQADMIDEGETIYVDNGYISLVRGHMRLNVGKYGSIK 97
>gi|145488263|ref|XP_001430136.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397231|emb|CAK62738.1| unnamed protein product [Paramecium tetraurelia]
Length = 201
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
L KP F K+ ++PG G+ VK+ K Q R DG+ + +AE L GDETG+I
Sbjct: 13 LTKPKFDKLSDVKPGIHGYNTYVKIEEIKKE-QIKRYDGST---LIVAEGLAGDETGVIR 68
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN--NLS 125
F + + +++G + RN ++ + RL++D++GR+ E + V N S
Sbjct: 69 FRVVGEYANQLEKGKSYAWRNGLSEVVQERHRLSLDQFGRI-TPEKDDLVVVNQNGKKYS 127
Query: 126 LIEY 129
IEY
Sbjct: 128 DIEY 131
>gi|254166808|ref|ZP_04873662.1| OB-fold nucleic acid binding domain protein [Aciduliprofundum
boonei T469]
gi|289596472|ref|YP_003483168.1| nucleic acid binding OB-fold tRNA/helicase-type [Aciduliprofundum
boonei T469]
gi|197624418|gb|EDY36979.1| OB-fold nucleic acid binding domain protein [Aciduliprofundum
boonei T469]
gi|289534259|gb|ADD08606.1| nucleic acid binding OB-fold tRNA/helicase-type [Aciduliprofundum
boonei T469]
Length = 137
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQ---MRIAECLVGDETGMIIFT 69
TK+ L P V V++ VL KG + + E +VGDETG II +
Sbjct: 4 LTKIKDLNPNAK----RVNVLAK--VLHKGEPKEINTKYGETKHVTEAVVGDETGTIIMS 57
Query: 70 ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRV 108
N+Q D+++EG + + N I + +G MRL V K+G +
Sbjct: 58 LWNEQADMIEEGEIIYVDNGYISLVRGHMRLNVGKYGSI 96
>gi|145491538|ref|XP_001431768.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398874|emb|CAK64370.1| unnamed protein product [Paramecium tetraurelia]
Length = 201
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
L KP F K+ ++PG G+ VKV K Q R DG+ + +AE L GD+TG+I
Sbjct: 13 LTKPKFDKLSDVKPGIHGYNTFVKVEDIKKE-QIKRYDGSL---LVVAEGLAGDDTGVIR 68
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN--NLS 125
F + +++++G RN ++ + RL++D++GR+ E + V N S
Sbjct: 69 FRVVGEYANILEKGKCYAWRNGLSEVIQERHRLSLDQFGRI-TPEKDDLVVVNQNGKKYS 127
Query: 126 LIEY 129
IEY
Sbjct: 128 DIEY 131
>gi|16082165|ref|NP_394606.1| single-stranded DNA-binding protein [Thermoplasma acidophilum DSM
1728]
gi|10640460|emb|CAC12274.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 147
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 14 TKVDQLRPGTSGHTLTVKVVST--KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
TK+ L P + + KV+S +Q GD Q + E +GD+TG +I +
Sbjct: 5 TKIKDLTPSSRRVNVVGKVLSVGEPKTIQTKFGD-----QRSVTEVTIGDDTGKVILSLW 59
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYE 130
DQ + G T+ + N + + +G +RL V K+G + V++ V ED + S EYE
Sbjct: 60 GDQASQARAGETLAIGNGYVSLVRGHIRLNVGKYGSLSVSDEEVTEVNEDFDASEKEYE 118
>gi|13542067|ref|NP_111755.1| single-stranded DNA-binding protein [Thermoplasma volcanium GSS1]
gi|14325498|dbj|BAB60402.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 145
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVST--KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
TK+ L P + + KV+S +Q GD Q + E +GD+TG +I +
Sbjct: 4 ITKIKDLTPSSRRVNVLGKVLSVGEPKTIQTKFGD-----QRSVTEVTIGDDTGKVILSL 58
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYE 130
DQ K G T+++ N + + +G +RL V K+G + V++ V E + S EYE
Sbjct: 59 WGDQAAQAKTGDTLMIGNGYVSLVRGHIRLNVGKYGSLTVSDEEVDEVNESYDASEKEYE 118
Query: 131 LV 132
V
Sbjct: 119 NV 120
>gi|297837479|ref|XP_002886621.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332462|gb|EFH62880.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 116
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 33 VSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLM 78
+STKMV+Q+G + + IAECLVGDE +IIFTARN+QV+++
Sbjct: 55 LSTKMVIQRGLQLVIRHGKCHIAECLVGDEKRIIIFTARNEQVNIL 100
>gi|70606760|ref|YP_255630.1| single-stranded DNA-binding protein [Sulfolobus acidocaldarius DSM
639]
gi|449066984|ref|YP_007434066.1| single-stranded DNA-binding protein [Sulfolobus acidocaldarius N8]
gi|449069256|ref|YP_007436337.1| single-stranded DNA-binding protein [Sulfolobus acidocaldarius
Ron12/I]
gi|68567408|gb|AAY80337.1| single strand DNA binding protein [Sulfolobus acidocaldarius DSM
639]
gi|449035492|gb|AGE70918.1| single-stranded DNA-binding protein [Sulfolobus acidocaldarius N8]
gi|449037764|gb|AGE73189.1| single-stranded DNA-binding protein [Sulfolobus acidocaldarius
Ron12/I]
Length = 146
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 15 KVDQLRPGTSGHTLTVKVV--STKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
KV+ L+PG +TV+V+ S V+Q G T I+E +VGDETG I T
Sbjct: 4 KVNSLKPGMENVNITVRVIEASEPRVIQTKNGTRT------ISEAVVGDETGRIKLTLWG 57
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
+ +K G+ + + NA +KG ++L +N + EDNN+ E
Sbjct: 58 NLAGTIKSGSVIKIANAWTTAYKGKVQL--------NAGSKSNVSEAEDNNIPEAE 105
>gi|302348760|ref|YP_003816398.1| Single-stranded DNA binding protein [Acidilobus saccharovorans
345-15]
gi|302329172|gb|ADL19367.1| Single-stranded DNA binding protein [Acidilobus saccharovorans
345-15]
Length = 162
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKM--VLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
KV LR G + V+V+S + + RGD T I+E +VGDETG I TA
Sbjct: 11 KVSSLREGEDNIDIKVRVLSVEPPKTIHTQRGDRT------ISEAVVGDETGRIKLTAWG 64
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
Q + EG V L+ A FKG ++L + G +E
Sbjct: 65 QQAGKLNEGDAVELKGAWTTSFKGQVQLNIGSRGSIE 101
>gi|429216813|ref|YP_007174803.1| OB-fold nucleic acid binding protein [Caldisphaera lagunensis DSM
15908]
gi|429133342|gb|AFZ70354.1| OB-fold nucleic acid binding protein [Caldisphaera lagunensis DSM
15908]
Length = 169
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Query: 15 KVDQLRPGTSGHTLTVKVVST--KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
KV LR G ++ V+V+S V+ RGD T I+E +VGDE+G I T
Sbjct: 7 KVSDLREGEDNVSIKVRVLSVDEPKVIHTKRGDRT------ISEAIVGDESGRIKLTMWG 60
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
+Q + EG + L+ A FKG ++L + G + + + ED
Sbjct: 61 NQAGKINEGDAIELKGAWTTSFKGDVQLNIGSRGEINKIDEGSLPKPED 109
>gi|328766536|gb|EGF76590.1| hypothetical protein BATDEDRAFT_92610 [Batrachochytrium
dendrobatidis JAM81]
Length = 131
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
T + + PG ++ V ++ T ++L R + +AE ++GD++G+ I +D
Sbjct: 5 TLIADIVPGDVQLSIQVDILETLVILSGQVSLQNGARNISVAEIVIGDQSGVAILELIDD 64
Query: 74 QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWG-RVEVAEPANFTVKEDNNLSLIEYE 130
Q+ +K+G V L N + +G RL + + + E N + +N+S IEYE
Sbjct: 65 QIAQLKQGMHVTLYNVTCKISRGFARLRSEPFKFQNESDGHYNQDINYSHNISNIEYE 122
>gi|330835490|ref|YP_004410218.1| hypothetical protein Mcup_1631 [Metallosphaera cuprina Ar-4]
gi|329567629|gb|AEB95734.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
Length = 129
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 15 KVDQLRPGTSGHTLTVKVVS---TKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
KV +L+P S +TVKVVS + V+ K DG+ ++ + LVGDETG I+ +
Sbjct: 12 KVRELKP-RSRADVTVKVVSLGEKRSVIGK---DGSS---HQVMDVLVGDETGSILMSVW 64
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
+ + + +G + + + + +GSMRL++ + GR+ + F NN+S
Sbjct: 65 DSNIPKISQGKFFTIEDGFVSVHRGSMRLSLGRSGRL-IETQGTFEANTQNNVS 117
>gi|48477745|ref|YP_023451.1| single-stranded DNA-binding protein [Picrophilus torridus DSM 9790]
gi|48430393|gb|AAT43258.1| replication factor A, large subunit [Picrophilus torridus DSM 9790]
Length = 145
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 54 IAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEP 113
+ E ++ D+TG I T N+Q D +K+ + + N + + +G MRL V K+G + +
Sbjct: 42 VTEVVIADDTGKITLTLWNEQADNVKDAVALRIDNGYVSLLRGHMRLNVGKYGSLSQTDD 101
Query: 114 ANFTVKEDNNLSLIEYE 130
ED ++S EYE
Sbjct: 102 E-IEANEDLDMSEKEYE 117
>gi|336476389|ref|YP_004615530.1| OB-fold tRNA/helicase-type nucleic acid binding protein
[Methanosalsum zhilinae DSM 4017]
gi|335929770|gb|AEH60311.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanosalsum
zhilinae DSM 4017]
Length = 436
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 50 RQMRIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
R+M I E ++GDETG + F +R VD+ G + NA +++FKG + +D+ VE
Sbjct: 195 REMTIIEGVIGDETGKLPFISRMMDVDI---GNVIRFENASVEVFKGLPSINLDENAEVE 251
Query: 110 VAEP 113
+ +P
Sbjct: 252 ILDP 255
>gi|116754196|ref|YP_843314.1| replication factor A [Methanosaeta thermophila PT]
gi|116665647|gb|ABK14674.1| nucleic acid binding, OB-fold, tRNA/helicase-type [Methanosaeta
thermophila PT]
Length = 371
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 12 VFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
+ TK+ +RP + T T +VV V + R DG+ R+A VGDETGMI T
Sbjct: 54 ILTKIKDIRPESGAVTFTGRVVHISEVREFSRSDGSI---GRVASLTVGDETGMIKVTLW 110
Query: 72 NDQVDLMKEGTTVILRNAKIDMF 94
+D DL+ G + + K+ F
Sbjct: 111 DDATDLVVSGDIRVDQCLKVRGF 133
>gi|33357645|pdb|1O7I|A Chain A, Crystal Structure Of A Single Stranded Dna Binding Protein
gi|33357646|pdb|1O7I|B Chain B, Crystal Structure Of A Single Stranded Dna Binding Protein
Length = 119
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV L+P +TV+V+ Q +G + I+E +VGDETG + T
Sbjct: 4 KVGNLKPNMESVNVTVRVLEASEARQIQTKNGVRT----ISEAIVGDETGRVKLTLWGKH 59
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRL 100
+KEG V + NA FKG ++L
Sbjct: 60 AGSIKEGQVVKIENAWTTAFKGQVQL 85
>gi|146303241|ref|YP_001190557.1| hypothetical protein Msed_0456 [Metallosphaera sedula DSM 5348]
gi|145701491|gb|ABP94633.1| hypothetical protein Msed_0456 [Metallosphaera sedula DSM 5348]
Length = 122
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 15 KVDQLRPGTSGHTLTVKVVS---TKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
KV L P +TVKVVS + V+ K DG+ ++ + LVGDETG I+ +
Sbjct: 2 KVKDLEPRRRA-DVTVKVVSLGEKRNVIGK---DGSS---HQVMDVLVGDETGSILMSVW 54
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
+ + + +G + + + + +GSMRL++ + G++ V F V NN+S
Sbjct: 55 DSNIQKVSQGKVFAIEDGFVSVHRGSMRLSLGRTGKM-VETQGTFEVNTQNNVS 107
>gi|15899120|ref|NP_343725.1| single-stranded DNA-binding protein [Sulfolobus solfataricus P2]
gi|284173765|ref|ZP_06387734.1| single-stranded DNA-binding protein [Sulfolobus solfataricus 98/2]
gi|384432715|ref|YP_005642073.1| OB-fold tRNA/helicase-type nucleic acid binding-protein [Sulfolobus
solfataricus 98/2]
gi|13815667|gb|AAK42515.1| Single-stranded DNA binding protein (SSB) [Sulfolobus solfataricus
P2]
gi|261600869|gb|ACX90472.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
solfataricus 98/2]
Length = 148
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV L+P +TV+V+ Q +G + I+E +VGDETG + T
Sbjct: 4 KVGNLKPNMESVNVTVRVLEASEARQIQTKNGVRT----ISEAIVGDETGRVKLTLWGKH 59
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRL 100
+KEG V + NA FKG ++L
Sbjct: 60 AGSIKEGQVVKIENAWTTAFKGQVQL 85
>gi|325183360|emb|CCA17822.1| cysteine synthase putative [Albugo laibachii Nc14]
Length = 564
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 53 RIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
R+ E +VGDETG++ TAR + +D +KE V A M+ +R A K
Sbjct: 65 RMTEAVVGDETGIVTLTARKEPIDSLKESGDVSSEIA-TPMYIIDVRRANTK-------- 115
Query: 113 PANFTVKEDNNLSLIEYELVN 133
+T +++ LS I+YELVN
Sbjct: 116 -PTYTDEDEERLSAIDYELVN 135
>gi|374632400|ref|ZP_09704774.1| hypothetical protein MetMK1DRAFT_00015140 [Metallosphaera
yellowstonensis MK1]
gi|373526230|gb|EHP71010.1| hypothetical protein MetMK1DRAFT_00015140 [Metallosphaera
yellowstonensis MK1]
Length = 120
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 53 RIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
++ + LVGDETG I+ + + + + +G + + + + +GSMRL + + G++ V
Sbjct: 36 QVMDVLVGDETGAILMSVWDSNIPKVTQGKVFAIEDGFVSVHRGSMRLTLGREGKL-VET 94
Query: 113 PANFTVKEDNNLS 125
+F V NNLS
Sbjct: 95 QGSFEVNTQNNLS 107
>gi|410670995|ref|YP_006923366.1| replication factor A [Methanolobus psychrophilus R15]
gi|409170123|gb|AFV23998.1| replication factor A [Methanolobus psychrophilus R15]
Length = 381
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV + PGT L KV+S + R DGT R+A LV DETG I T +D+
Sbjct: 66 KVADIAPGTGNVRLIAKVMSVFPAKEFNRNDGTI---GRVANLLVADETGSIRLTLWDDK 122
Query: 75 VDLMKEGTTVILRNAKIDMF 94
DL+K G I + +I +
Sbjct: 123 ADLVKTGDITIGQTFQISGY 142
>gi|340507512|gb|EGR33458.1| hypothetical protein IMG5_051990 [Ichthyophthirius multifiliis]
Length = 414
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 23/132 (17%)
Query: 8 LRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMII 67
L+KP++TK++QLR + V+V TQ+ + + E + D TG+
Sbjct: 13 LQKPLWTKLNQLRSFFKSIHVCVQVQKV-----------TQIPETKQIELTLADNTGLAR 61
Query: 68 FTARNDQVD--LMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
VD L+K G + LRNAK + + ++KWG + ++NN
Sbjct: 62 AILSEGAVDPNLIKVGNKIALRNAKTKYIDNKLVIIINKWG----------CITDENNSG 111
Query: 126 LIEYELVNVVEE 137
L E + + + E
Sbjct: 112 LFEGQALELNNE 123
>gi|227826571|ref|YP_002828350.1| single-stranded DNA-binding protein [Sulfolobus islandicus M.14.25]
gi|227829213|ref|YP_002830992.1| single-stranded DNA-binding protein [Sulfolobus islandicus
L.S.2.15]
gi|229577982|ref|YP_002836380.1| single-stranded DNA-binding protein [Sulfolobus islandicus
Y.G.57.14]
gi|229583735|ref|YP_002842236.1| single-stranded DNA-binding protein [Sulfolobus islandicus M.16.27]
gi|238618657|ref|YP_002913482.1| single-stranded DNA-binding protein [Sulfolobus islandicus M.16.4]
gi|284996568|ref|YP_003418335.1| tRNA/helicase-type nucleic acid binding protein [Sulfolobus
islandicus L.D.8.5]
gi|385772186|ref|YP_005644752.1| OB-fold tRNA/helicase-type nucleic acid binding-protein [Sulfolobus
islandicus HVE10/4]
gi|385774902|ref|YP_005647470.1| OB-fold tRNA/helicase-type nucleic acid binding-protein [Sulfolobus
islandicus REY15A]
gi|227455660|gb|ACP34347.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus L.S.2.15]
gi|227458366|gb|ACP37052.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus M.14.25]
gi|228008696|gb|ACP44458.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus Y.G.57.14]
gi|228018784|gb|ACP54191.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus M.16.27]
gi|238379726|gb|ACR40814.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus M.16.4]
gi|284444463|gb|ADB85965.1| nucleic acid binding, OB-fold, tRNA/helicase-type [Sulfolobus
islandicus L.D.8.5]
gi|323473650|gb|ADX84256.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus REY15A]
gi|323476300|gb|ADX81538.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus HVE10/4]
Length = 148
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV L+P +TV+V+ Q +G + I+E +VGDETG + T
Sbjct: 4 KVGNLKPNMESVDVTVRVLEASEARQIQTKNGVRT----ISEAIVGDETGRVKLTLWGKH 59
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRL 100
+KEG V + NA FKG ++L
Sbjct: 60 AGSIKEGQVVKIENAWTTAFKGQVQL 85
>gi|330835246|ref|YP_004409974.1| single-stranded DNA-binding protein [Metallosphaera cuprina Ar-4]
gi|329567385|gb|AEB95490.1| single-stranded DNA-binding protein [Metallosphaera cuprina Ar-4]
Length = 156
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 15 KVDQLRPGTSGHTLTVKV--VSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
K+ L+ G +T +V V + V+Q G T I E +VGD+TG + T
Sbjct: 4 KIGNLKGGMENINVTARVLEVGEQKVVQTKNGPRT------IREVMVGDDTGRVKLTLWG 57
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
+Q D +KEG + + NA +FKG ++L R ++ E A ++ E
Sbjct: 58 NQADEVKEGQIIKVENAWTTVFKGQVQLNAGS--RSKITESAEESIPE 103
>gi|146303452|ref|YP_001190768.1| single-stranded DNA-binding protein [Metallosphaera sedula DSM
5348]
gi|145701702|gb|ABP94844.1| nucleic acid binding, OB-fold, tRNA/helicase-type [Metallosphaera
sedula DSM 5348]
Length = 158
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 15 KVDQLRPGTSGHTLTVKV--VSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
K+ L+ G ++T +V V + V+Q G T I E +VGD+TG + T
Sbjct: 4 KIGNLKGGMENISVTARVLEVGEQKVVQTKNGPRT------IREVMVGDDTGRVKLTLWG 57
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE 120
+Q D +KEG + + NA +FKG ++L R +++E A ++ E
Sbjct: 58 NQGDEVKEGQIIKVENAWTTVFKGQVQLNAGS--RSKISESAEESIPE 103
>gi|257076028|ref|ZP_05570389.1| single-stranded DNA-binding protein [Ferroplasma acidarmanus fer1]
Length = 158
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 54 IAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWG 106
++E +V D+TG I T +DQ +++G + + N I + +G MRL V K+G
Sbjct: 42 VSEVIVADDTGKITLTLWDDQTKDIRDGEVLKIDNGYISLLRGHMRLNVGKYG 94
>gi|170289718|ref|YP_001736534.1| single-stranded DNA-binding protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170173798|gb|ACB06851.1| Single-stranded DNA-binding replication protein A (RPA), large (70
kD) subunit or related ssDNA-binding protein [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 142
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 15 KVDQLRPGTSGHTLTVKV--VSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
KV LRPG + + V+V V V++ RG T ++E VGDETG ++
Sbjct: 6 KVLDLRPGENSVNVKVRVLEVGESRVVETKRGPRT------LSEATVGDETGRVVLVLWG 59
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWG 106
D +KEG V L+NA +++ ++L + G
Sbjct: 60 DHAGKLKEGKVVQLQNAFTTVYREKVQLNLGNMG 93
>gi|332797833|ref|YP_004459333.1| single-strand DNA-binding protein [Acidianus hospitalis W1]
gi|332695568|gb|AEE95035.1| single-strand DNA-binding protein [Acidianus hospitalis W1]
Length = 142
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 35 TKMVLQKGRGDGTQVR--QMRIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKID 92
T VLQ G Q R Q I E ++GDETG I T +Q D +KEG + + N
Sbjct: 18 TGRVLQVGEQKVVQTRNGQRTIREVMIGDETGRIKLTLWGNQGDNIKEGQVIKVENGWTT 77
Query: 93 MFKGSMRL 100
+FKG ++L
Sbjct: 78 VFKGQVQL 85
>gi|374632071|ref|ZP_09704445.1| OB-fold nucleic acid binding protein [Metallosphaera
yellowstonensis MK1]
gi|373525901|gb|EHP70681.1| OB-fold nucleic acid binding protein [Metallosphaera
yellowstonensis MK1]
Length = 155
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 15 KVDQLRPGTSGHTLTVKV--VSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
K+ L+ G +T +V V + V+Q G T I E +VGD+TG + T
Sbjct: 4 KIGNLKGGMENIEVTARVLEVGEQKVVQTKNGPRT------IREVMVGDDTGRVKLTLWG 57
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNL 124
Q D +KEG + + NA +FKG ++L R +++E + +V E + +
Sbjct: 58 SQGDTVKEGQVIKVENAWTTVFKGQVQLNAGS--RSKISEASEASVPEADQV 107
>gi|229583193|ref|YP_002841592.1| single-stranded DNA-binding protein [Sulfolobus islandicus
Y.N.15.51]
gi|228013909|gb|ACP49670.1| nucleic acid binding OB-fold tRNA/helicase-type [Sulfolobus
islandicus Y.N.15.51]
Length = 148
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
KV L+P +TV+V+ Q +G + I++ +VGDETG + T
Sbjct: 4 KVGNLKPNMESVDVTVRVLEASEARQIQTKNGVRT----ISDAIVGDETGRVKLTLWGKH 59
Query: 75 VDLMKEGTTVILRNAKIDMFKGSMRL 100
+KEG V + NA FKG ++L
Sbjct: 60 AGSIKEGQVVKIENAWTTAFKGQVQL 85
>gi|15920719|ref|NP_376388.1| single-stranded DNA-binding protein [Sulfolobus tokodaii str. 7]
gi|15621502|dbj|BAB65497.1| single-stranded DNA-binding protein [Sulfolobus tokodaii str. 7]
Length = 145
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 15 KVDQLRPGTSGHTLTVKVV--STKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
K++ L+PG +TV+V+ + V+Q G T I+E +VGD+TG + T
Sbjct: 5 KINNLKPGMENVNVTVRVLEATEAKVIQTKNGART------ISEAIVGDDTGRVKLTLWG 58
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRL 100
+KEG V + NA +KG ++L
Sbjct: 59 KLAGSIKEGMVVKIDNAWTTAYKGKVQL 86
>gi|435849694|ref|YP_007301635.1| hypothetical protein Metho_2467 [Methanomethylovorans hollandica
DSM 15978]
gi|433663182|gb|AGB50607.1| hypothetical protein Metho_2467 [Methanomethylovorans hollandica
DSM 15978]
Length = 290
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 58 LVGDETGMIIFTA-RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA 114
+ GDETG +IFT V L++EG T+ RN + F G+ +++V+K + V++ A
Sbjct: 101 VAGDETGSVIFTIWSTANVPLIEEGQTIDFRNVVCNPFNGNPQISVNKSSELAVSDKA 158
>gi|340368934|ref|XP_003383005.1| PREDICTED: SOSS complex subunit B1-like [Amphimedon queenslandica]
Length = 225
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
T ++ LR G + +V + QK + DG+ VR+ C V D+TG IIF+ N
Sbjct: 7 ITPIEDLRAGMKN-VHCIFIVIDRGTQQKTK-DGSTVRK-----CRVADKTGSIIFSVWN 59
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
+ + + G + L ++KG++ L K+G VE
Sbjct: 60 REGEAISTGDIIRLTKGYSSLWKGNLVLYCGKYGLVE 96
>gi|448658545|ref|ZP_21682945.1| hypothetical protein C435_17692 [Haloarcula californiae ATCC 33799]
gi|445761270|gb|EMA12519.1| hypothetical protein C435_17692 [Haloarcula californiae ATCC 33799]
Length = 282
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 58 LVGDETGMIIFTA-RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
L+ DE+G FT + L++EG ++LRN + ++G +AV W R+E E +
Sbjct: 221 LIEDESGRTKFTTWAKSEAPLVEEGDHIVLRNVAKNWYEGRCSVAVTSWSRIEFPERGRW 280
>gi|320163462|gb|EFW40361.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 12 VFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
VF K+ L+P S ++ ++ + VL+KG T+ + + CLV D +G + T
Sbjct: 6 VFIKIADLKP--SMRSVRIRCI----VLEKGESQRTKDDTL-VTSCLVADASGSVRLTVW 58
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYE 130
+D ++ + + N +FKGS+ + K VE + E N+S +++
Sbjct: 59 DDLCLHIQPSDILHITNGYCSLFKGSLTVYTGKAAMVERVGEFTMSFSETPNMSSVQWP 117
>gi|448727286|ref|ZP_21709652.1| replication factor A [Halococcus morrhuae DSM 1307]
gi|445791500|gb|EMA42140.1| replication factor A [Halococcus morrhuae DSM 1307]
Length = 430
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 18 QLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDL 77
+L PG G TL V+V + + GR DG + I +V DE+G + FT N +
Sbjct: 166 ELVPGDRGRTLAVRVAEVEEKVIDGR-DG----ETEILSGVVADESGRLPFTDWNPH-EG 219
Query: 78 MKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
+ EG +V + NA + F+G + V ++ + EP + T++ N
Sbjct: 220 IDEGASVRIENAYVREFRGVPSVNVAEFSTI---EPLDETIEGGEN 262
>gi|408404884|ref|YP_006862867.1| nucleic acid binding OB-fold tRNA/helicase-type [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|300521514|gb|ADK25968.1| SSB-like single OB-fold protein [Candidatus Nitrososphaera
gargensis]
gi|408365480|gb|AFU59210.1| putative nucleic acid binding OB-fold tRNA/helicase-type
[Candidatus Nitrososphaera gargensis Ga9.2]
Length = 95
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 15 KVDQLRPGTSGHTLTVKVVST---KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
K+ +L+ G ++ KV S + V K G T +A+ ++ DE+G I +
Sbjct: 2 KISELKAGMRNVSVVAKVESVGEPRTVNLKAGGTNT------VADAIISDESGKIKLSLW 55
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRV 108
D ++ ++ G + + N I+ FKG L+V K+G++
Sbjct: 56 GDDINKIQAGDRISIENGYINTFKGENSLSVGKFGKM 92
>gi|76802614|ref|YP_327622.1| replication factor A [Natronomonas pharaonis DSM 2160]
gi|76558479|emb|CAI50071.1| replication protein A [Natronomonas pharaonis DSM 2160]
Length = 425
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 18 QLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDL 77
L PG G T+ V+V+ + GR DG + I + + GDET + FT D D
Sbjct: 170 DLEPGDRGRTVEVRVLEVEQKTIDGR-DG----ETEILDGVFGDETSRLPFTDW-DPHDA 223
Query: 78 MKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV 110
++ GT+V L + +D F+G + V + VE
Sbjct: 224 IEAGTSVRLEDVYVDEFRGVPSVNVTAFTTVEA 256
>gi|124027704|ref|YP_001013024.1| single-stranded DNA-binding protein [Hyperthermus butylicus DSM
5456]
gi|123978398|gb|ABM80679.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 139
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKM--VLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARN 72
K+ +L+PG T+ V+V+ + V++ RG T I+E +VGDETG + T
Sbjct: 10 KISELKPGMDNVTVRVRVLEAEAPRVIETRRGPRT------ISEAVVGDETGRVKLTLWG 63
Query: 73 DQVDLMKEGTTVILRNAKIDMFKGSMRLAV 102
+ EG V ++ A ++G++ L V
Sbjct: 64 RAAGTLSEGEAVEIQGAWTTNYRGNVVLNV 93
>gi|335437099|ref|ZP_08559882.1| hypothetical protein HLRTI_08340 [Halorhabdus tiamatea SARL4B]
gi|334896482|gb|EGM34631.1| hypothetical protein HLRTI_08340 [Halorhabdus tiamatea SARL4B]
Length = 288
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 58 LVGDETGMIIFTA-RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
L+ D++G I FT Q +++EG TV R A + ++G +A+ W R+E E
Sbjct: 226 LIADDSGKIKFTCWEKSQQTVVREGQTVRFRAAAKNWYEGRCSIALTGWSRIEFPE 281
>gi|448739359|ref|ZP_21721374.1| replication factor A [Halococcus thailandensis JCM 13552]
gi|445799954|gb|EMA50323.1| replication factor A [Halococcus thailandensis JCM 13552]
Length = 430
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 18 QLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDL 77
+L PG G TL V+V + + GR DG + +I +V DE+G + FT N D
Sbjct: 166 ELVPGDRGRTLAVRVAEVEEKVIDGR-DG----ETQILSGVVADESGRLPFTDWNPH-DG 219
Query: 78 MKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNN 123
+ E ++ + NA + F+G + V ++ + EP + T++ N
Sbjct: 220 IDEDASIRIENAYVREFRGVPSVNVAEFSTI---EPLDETIEGGEN 262
>gi|385805173|ref|YP_005841571.1| single-strand DNA-binding protein [Fervidicoccus fontis Kam940]
gi|383795036|gb|AFH42119.1| single-strand DNA-binding protein [Fervidicoccus fontis Kam940]
Length = 156
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG 60
M+E K +P K+ L+ G S ++ +V+ T GT+ I+E ++G
Sbjct: 1 MSEEKDMGEEPQNKKIMDLKQGESSVSIKARVLETGDTKTIETKKGTRT----ISEAILG 56
Query: 61 DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAV 102
D+TG I T D+ ++EG V ++ A F+G ++L V
Sbjct: 57 DDTGRIKATFWGDKAGSVQEGQAVEVKGAWTTSFRGKVQLNV 98
>gi|48478491|ref|YP_024197.1| replication factor A [Picrophilus torridus DSM 9790]
gi|48431139|gb|AAT44004.1| replication factor-A protein 1 [Picrophilus torridus DSM 9790]
Length = 350
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 58 LVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFT 117
LVGDETG+I FTA + D++K G + ++ A + ++G RL D + V N
Sbjct: 40 LVGDETGVIPFTAW-EFPDVIKSGDVIEVKYAHLKEYRGKFRLYFDSRTEIMVKPGENIE 98
Query: 118 VK 119
+K
Sbjct: 99 IK 100
>gi|399575764|ref|ZP_10769522.1| single-stranded DNA-binding protein [Halogranum salarium B-1]
gi|399240032|gb|EJN60958.1| single-stranded DNA-binding protein [Halogranum salarium B-1]
Length = 492
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L KV+ T + R DG++ R+A VGDETG + T ++Q
Sbjct: 165 RVEDLSLGLSDVNLKGKVLDTSEIRTFDRDDGSE---GRVANLTVGDETGRVRVTLWDEQ 221
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
D E G TV + + + GS+ L V G VE
Sbjct: 222 ADRADELATGVTVEVVDGYVRERDGSLELHVGSRGAVE 259
>gi|448735070|ref|ZP_21717288.1| replication factor A [Halococcus salifodinae DSM 8989]
gi|445798939|gb|EMA49324.1| replication factor A [Halococcus salifodinae DSM 8989]
Length = 483
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQV 75
+D L G S LT ++ T V R DG++ R+A +GDETG T +DQ
Sbjct: 163 IDGLSLGQSDVDLTGLILDTDTVRTFDRDDGSE---GRVANLTLGDETGRTRVTLWDDQA 219
Query: 76 DLMKE---GTTVILRNAKIDMFKGSMRLAV-DKWGRVEVAEPANFT 117
+ ++E GTT+ L + + G + L V D+ G EV +T
Sbjct: 220 ERVEELAAGTTIELTDGYVRERNGDLELHVGDRGGLTEVDTTVEYT 265
>gi|222478550|ref|YP_002564787.1| replication factor A [Halorubrum lacusprofundi ATCC 49239]
gi|222451452|gb|ACM55717.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorubrum
lacusprofundi ATCC 49239]
Length = 501
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L +V+ T + R DG++ R+A VGDETG + T +D+
Sbjct: 164 RVEDLSLGASDVDLVGQVLDTDSIRTFDRDDGSE---GRVANLTVGDETGRVRVTLWDDK 220
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL++E G V + + + G + L V G VE + V E +++ +E
Sbjct: 221 ADLVEEFEAGEVVEVGDGYVRERDGDLELHVGDRGTVERVDEDVEYVPETTDIAELE 277
>gi|13542016|ref|NP_111704.1| replication factor A [Thermoplasma volcanium GSS1]
Length = 358
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 12 VFTKVDQLRPGTSGHTLTVKVVS-TKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
+ +K+ + G L VKV+S K ++ RG+ T ++GD+TG + FTA
Sbjct: 1 MLSKIANIDAARQGLDLKVKVLSLNKKTIKNDRGETTYFYG------IIGDDTGTVSFTA 54
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
+ +K G V ++N ++ G +R+ VD +V V +P +
Sbjct: 55 WSFPA-AVKSGDVVEIKNCYSSLYNGKIRIYVDSRSQV-VLKPDEY 98
>gi|435852505|ref|YP_007314091.1| single-stranded DNA-binding protein [Methanomethylovorans
hollandica DSM 15978]
gi|433663135|gb|AGB50561.1| single-stranded DNA-binding protein [Methanomethylovorans
hollandica DSM 15978]
Length = 375
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K+ ++ + L KV+S + + RGDGT ++ LV DETG I T +D+
Sbjct: 59 KIVDIKSDSGNVNLIAKVLSVFPIREFTRGDGTF---GKVGNLLVADETGSIRITLWDDK 115
Query: 75 VDLMKEGTTVILRNAKIDMF 94
DL+ +G I +N +I +
Sbjct: 116 ADLINQGFIEISQNLQISGY 135
>gi|14325449|dbj|BAB60353.1| TVG1242712 [Thermoplasma volcanium GSS1]
Length = 363
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 12 VFTKVDQLRPGTSGHTLTVKVVS-TKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
+ +K+ + G L VKV+S K ++ RG+ T ++GD+TG + FTA
Sbjct: 6 MLSKIANIDAARQGLDLKVKVLSLNKKTIKNDRGETTYFYG------IIGDDTGTVSFTA 59
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
+ +K G V ++N ++ G +R+ VD +V V +P +
Sbjct: 60 WSFPA-AVKSGDVVEIKNCYSSLYNGKIRIYVDSRSQV-VLKPDEY 103
>gi|296242163|ref|YP_003649650.1| OB-fold tRNA/helicase-type nucleic acid binding-protein
[Thermosphaera aggregans DSM 11486]
gi|296094747|gb|ADG90698.1| nucleic acid binding OB-fold tRNA/helicase-type [Thermosphaera
aggregans DSM 11486]
Length = 167
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTK--MVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTAR 71
T + L+PG ++ +V+S++ V+Q +G T I+ ++GD TG + TA
Sbjct: 28 TNIKDLKPGMENVSVKARVLSSEPPHVIQTKKGPRT------ISNAVIGDSTGRVEVTAW 81
Query: 72 NDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDK 104
++ + EG V ++ F+G ++L + +
Sbjct: 82 GEKAGQLTEGEAVEIKGGWTTEFRGKVQLNIGR 114
>gi|448494503|ref|ZP_21609490.1| replication factor A [Halorubrum californiensis DSM 19288]
gi|445689338|gb|ELZ41578.1| replication factor A [Halorubrum californiensis DSM 19288]
Length = 497
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L +V+ T + R DG++ R+A VGDETG + T +D+
Sbjct: 164 RVEDLALGASDVDLVGQVLDTDSIRTFDRDDGSE---GRVANLTVGDETGRVRVTLWDDK 220
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
DL +E G V + + + G + L V G VE
Sbjct: 221 ADLAEEFDPGEVVEVGDGYVRERDGDLELHVGDRGTVE 258
>gi|448624305|ref|ZP_21670378.1| replication factor A [Haloferax denitrificans ATCC 35960]
gi|445750272|gb|EMA01711.1| replication factor A [Haloferax denitrificans ATCC 35960]
Length = 490
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L K++ T V R DGT+ R++ VGD TG + T +++
Sbjct: 163 RVEDLALGLSDVNLEGKILDTGTVRTFDRDDGTE---GRVSNLSVGDPTGRVRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL +E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLAEELETGQSVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLE 276
>gi|448476279|ref|ZP_21603443.1| replication factor A [Halorubrum aidingense JCM 13560]
gi|445815828|gb|EMA65747.1| replication factor A [Halorubrum aidingense JCM 13560]
Length = 488
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L +V+ T V R DG++ R+A VGDETG + T +D+
Sbjct: 163 RVEDLSLGASDIDLVGQVLDTDSVRTFDRDDGSE---GRVANLTVGDETGRVRVTLWDDK 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL E G V + + + G + L V G VE + V E +++ +E
Sbjct: 220 ADLADEFAAGEVVEVGDGYVRERNGDLELHVGDRGTVERVDEDVEYVPETTDIAELE 276
>gi|448605587|ref|ZP_21658213.1| replication factor A [Haloferax sulfurifontis ATCC BAA-897]
gi|445741613|gb|ELZ93112.1| replication factor A [Haloferax sulfurifontis ATCC BAA-897]
Length = 489
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L K++ T V R DGT+ R++ VGD TG + T +++
Sbjct: 163 RVEDLALGLSDVNLEGKILDTGTVRTFDRDDGTE---GRVSNLSVGDPTGRVRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL +E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLAEELETGQSVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLE 276
>gi|448582442|ref|ZP_21645946.1| replication factor A [Haloferax gibbonsii ATCC 33959]
gi|445732090|gb|ELZ83673.1| replication factor A [Haloferax gibbonsii ATCC 33959]
Length = 486
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L K++ T V R DGT+ R++ VGD TG + T +++
Sbjct: 163 RVEDLALGLSDVNLEGKILDTGTVRTFDRDDGTE---GRVSNLSVGDPTGRVRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL +E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLAEELETGQSVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLE 276
>gi|448560953|ref|ZP_21634305.1| replication factor A [Haloferax prahovense DSM 18310]
gi|445721185|gb|ELZ72853.1| replication factor A [Haloferax prahovense DSM 18310]
Length = 490
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L K++ T V R DGT+ R++ VGD TG + T +++
Sbjct: 163 RVEDLALGLSDVNLEGKILDTGTVRTFDRDDGTE---GRVSNLSVGDPTGRVRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL +E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLAEELETGQSVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIGTLE 276
>gi|11498386|ref|NP_069614.1| replication factor A [Archaeoglobus fulgidus DSM 4304]
gi|2649842|gb|AAB90472.1| predicted coding region AF_0780 [Archaeoglobus fulgidus DSM 4304]
Length = 312
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 4 SKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDET 63
+ + +R+ TK+++++ T+ KV+ Q + Q+ L+GDET
Sbjct: 57 APATVRRERITKIEEIKEPNKWVTVKAKVI------QLWESSSPSIAQV----GLIGDET 106
Query: 64 GMIIF----TARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDK 104
G I F A+ VD EG + I RN +D + G +RL V K
Sbjct: 107 GYIRFLVWTKAKKQPVD---EGKSYIFRNVVVDDYGGVLRLNVTK 148
>gi|448528666|ref|ZP_21620174.1| hypothetical protein C467_00107 [Halorubrum hochstenium ATCC
700873]
gi|445710406|gb|ELZ62220.1| hypothetical protein C467_00107 [Halorubrum hochstenium ATCC
700873]
Length = 291
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
L+ DE+G FT + +++EG TV R K + ++G LA+ W R+E E
Sbjct: 229 LIEDESGRTKFTIWEKSKKTVVREGQTVRFRAVKKNWYQGRCSLAITGWSRIEFPE 284
>gi|305663511|ref|YP_003859799.1| OB-fold tRNA/helicase-type nucleic acid binding-protein
[Ignisphaera aggregans DSM 17230]
gi|304378080|gb|ADM27919.1| nucleic acid binding OB-fold tRNA/helicase-type [Ignisphaera
aggregans DSM 17230]
Length = 143
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 14 TKVDQLRPGTSGHTLTVKVV---STKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
TK+ L+PG V+V+ T+ + K GT+ + E +VGD+TG +
Sbjct: 6 TKIINLKPGMENINTAVRVLEALGTRTIDTKA---GTRT----LGEYIVGDDTGRVKLVV 58
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
+ + G V +RNA + +FKG ++L K +E
Sbjct: 59 WGSKAGSLASGDVVEIRNAWVTVFKGEVQLNAGKNSSIE 97
>gi|448364436|ref|ZP_21553029.1| hypothetical protein C481_20421 [Natrialba asiatica DSM 12278]
gi|445644438|gb|ELY97452.1| hypothetical protein C481_20421 [Natrialba asiatica DSM 12278]
Length = 316
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
L+ DET + FT N ++ EG TV +RNA + LAV W R+E E +
Sbjct: 253 LIADETEKMKFTIWENSYQTIVSEGETVRIRNAAKNWHNERCSLAVTGWSRLEFPERGQW 312
Query: 117 TVKE 120
+E
Sbjct: 313 WTQE 316
>gi|354611230|ref|ZP_09029186.1| nucleic acid binding OB-fold tRNA/helicase-type [Halobacterium sp.
DL1]
gi|353196050|gb|EHB61552.1| nucleic acid binding OB-fold tRNA/helicase-type [Halobacterium sp.
DL1]
Length = 422
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 2 AESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGD 61
E +SG P + + P + T+TVKV++ + +GD +R+ +A D
Sbjct: 50 GEGQSG--GPTAANIADIGPDSGNVTVTVKVLTAGQRSIRYQGDDHVIREGELA-----D 102
Query: 62 ETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRL 100
ETG + +TA D ++ G TV + NA + ++G+ L
Sbjct: 103 ETGTLSYTAWEDF--GLEPGDTVTIGNASVREWEGNAEL 139
>gi|448728565|ref|ZP_21710889.1| replication factor A [Halococcus saccharolyticus DSM 5350]
gi|445796750|gb|EMA47247.1| replication factor A [Halococcus saccharolyticus DSM 5350]
Length = 451
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
T + L PG G L V V + GR DG + I + D TG + FT D
Sbjct: 162 THLSALAPGDRGVALEVAVAEVERKTIDGR-DG----ETEILSGVFADGTGRLPFTDW-D 215
Query: 74 QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPA 114
D ++EGT+V + NA + F+G + V ++ VE + A
Sbjct: 216 PNDAIEEGTSVGIENAYVREFRGVPSVNVSEFSTVEALDRA 256
>gi|444518232|gb|ELV12043.1| Zinc transporter ZIP5 [Tupaia chinensis]
Length = 557
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
T V ++PG L V+ T V + DG +VR C V D+TG I + +D
Sbjct: 5 TFVKDIKPGLKNLNLIFIVLETGRVTKTK--DGHEVRT-----CKVADKTGSINISVWDD 57
Query: 74 QVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
+L++ G + L +FKG + L + G ++
Sbjct: 58 VGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQ 93
>gi|336253183|ref|YP_004596290.1| OB-fold tRNA/helicase-type nucleic acid binding protein [Halopiger
xanaduensis SH-6]
gi|335337172|gb|AEH36411.1| nucleic acid binding OB-fold tRNA/helicase-type [Halopiger
xanaduensis SH-6]
Length = 495
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQV 75
V+ L G S L V+ T V R DG++ +++ VGDETG + T ++Q
Sbjct: 169 VEDLSLGLSNVNLVGVVLDTDSVRTFDRDDGSE---GKVSNLAVGDETGRVRVTLWDEQA 225
Query: 76 DLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
DL E GTTV + + + G++ L V G VE
Sbjct: 226 DLATELEPGTTVEVVDGYVKERDGNLELHVGNRGTVE 262
>gi|310752291|gb|ADP09452.1| OB-fold nucleic acid binding domain protein [uncultured marine
crenarchaeote E48-1C]
Length = 215
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 54 IAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV 110
++ L+ DETG I + N Q+ + EG + +++ K+ F+G +L + + G + V
Sbjct: 157 VSNALIADETGSIRISLWNRQISTVSEGDMINIKSGKVFRFRGERQLRIGRHGSLSV 213
>gi|223365695|pdb|2KEN|A Chain A, Solution Nmr Structure Of The Ob Domain (Residues 67-166)
Of Mm0293 From Methanosarcina Mazei. Northeast
Structural Genomics Consortium Target Mar214a.
gi|251836796|pdb|2KBN|A Chain A, Solution Nmr Structure Of The Ob Domain (Residues 67-166)
Of Mm0293 From Methanosarcina Mazei. Northeast
Structural Genomics Consortium Target Mar214a
Length = 109
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE-VAEP 113
L+GDETG+I FT +N ++ L+++G + +LR+ + + ++ V+K +E ++EP
Sbjct: 40 LLGDETGIIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLSEP 97
>gi|288931687|ref|YP_003435747.1| nucleic acid binding OB-fold tRNA/helicase-type [Ferroglobus
placidus DSM 10642]
gi|288893935|gb|ADC65472.1| nucleic acid binding OB-fold tRNA/helicase-type [Ferroglobus
placidus DSM 10642]
Length = 306
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 58 LVGDETGMIIFT--ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGR-VEVAEPA 114
L+GDETGMI F A++ + + ++EG + + +N D F+G M++ V+++ VE+ E
Sbjct: 106 LIGDETGMIKFVIWAKSGKGE-VEEGKSYLFKNVVTDSFQGRMQINVNRFSSIVELEEDI 164
Query: 115 NFTVKE 120
+ +E
Sbjct: 165 SLPPRE 170
>gi|354609343|ref|ZP_09027299.1| nucleic acid binding OB-fold tRNA/helicase-type [Halobacterium sp.
DL1]
gi|353194163|gb|EHB59665.1| nucleic acid binding OB-fold tRNA/helicase-type [Halobacterium sp.
DL1]
Length = 473
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQV 75
V L G S LT ++++T+ V R DG++ ++ +VGDETG + T +DQ
Sbjct: 165 VGDLSLGISDVNLTGEILATESVRTFDRDDGSE---GSVSNLVVGDETGRVRVTLWDDQA 221
Query: 76 DLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
D E G V + + + GS+ L V G VEV +
Sbjct: 222 DRATELDAGEVVEVVDGYVRERDGSLELHVGDRGAVEVVD 261
>gi|448721700|ref|ZP_21704243.1| replication factor A [Halococcus hamelinensis 100A6]
gi|445790772|gb|EMA41422.1| replication factor A [Halococcus hamelinensis 100A6]
Length = 472
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 22 GTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLMKE- 80
G S +LT V+ T V R DG++ R++ +GDETG + T +DQ +L++E
Sbjct: 169 GQSDVSLTGIVLDTDSVRTFDRDDGSE---GRVSNLTLGDETGRVRVTLWDDQTELVEEL 225
Query: 81 --GTTVILRNAKIDMFKGSMRL 100
GTTV L + + G + L
Sbjct: 226 SPGTTVELVDGYVRERNGDLEL 247
>gi|15789450|ref|NP_279274.1| replication factor A [Halobacterium sp. NRC-1]
gi|169235165|ref|YP_001688365.1| replication factor A [Halobacterium salinarum R1]
gi|10579780|gb|AAG18754.1| replication A related protein [Halobacterium sp. NRC-1]
gi|167726231|emb|CAP13011.1| replication protein A [Halobacterium salinarum R1]
Length = 474
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 18 QLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDL 77
L G S TL +V+ T+ V R DG++ R++ +VGDETG + T +DQ D
Sbjct: 171 DLSLGVSDVTLVGEVLDTEAVRTFDRDDGSE---GRVSNLVVGDETGRVRVTLWDDQADT 227
Query: 78 ---MKEGTTVILRNAKIDMFKGSMRLAVDKWGRV 108
+ G V + + + +GS+ L V G V
Sbjct: 228 ATDLDAGAVVEIVDGYVREREGSLELHVGDTGAV 261
>gi|284172995|ref|YP_003406376.1| hypothetical protein Htur_4969 [Haloterrigena turkmenica DSM 5511]
gi|284017755|gb|ADB63703.1| hypothetical protein Htur_4969 [Haloterrigena turkmenica DSM 5511]
Length = 293
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANF 116
L+ DET + FT N + EG TV +RNA + LAV W R+E E +
Sbjct: 230 LIADETEKMKFTIWENSYQTTVSEGETVRIRNAAKNWHNERCNLAVTGWSRLEFPERGRW 289
Query: 117 TVKE 120
++E
Sbjct: 290 WIQE 293
>gi|55378982|ref|YP_136832.1| replication factor A [Haloarcula marismortui ATCC 43049]
gi|55231707|gb|AAV47126.1| replication A related protein [Haloarcula marismortui ATCC 43049]
Length = 488
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMI---IFTA 70
+ +D L G S TL V+ T + R DG++ R++ +GDETG I ++
Sbjct: 163 SSIDALTMGQSDVTLRGLVLDTDSIRTFDRDDGSE---GRVSNLTLGDETGRIRVTLWDD 219
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
R D+ D + G V + + + GS+ L V G V+ E
Sbjct: 220 RADRADELDAGAAVEIIDGYVRERDGSLELHVGDQGAVDEVE 261
>gi|21226395|ref|NP_632317.1| replication factor A [Methanosarcina mazei Go1]
gi|20904651|gb|AAM29989.1| conserved protein [Methanosarcina mazei Go1]
Length = 421
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE-VAEP 113
L+GDETG+I FT +N ++ L+++G + +LR+ + + ++ V+K +E ++EP
Sbjct: 105 LLGDETGIIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLSEP 162
>gi|118431409|ref|NP_147870.2| ssDNA-binding protein [Aeropyrum pernix K1]
gi|116062732|dbj|BAA80315.2| single-stranded DNA binding protein [Aeropyrum pernix K1]
Length = 151
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 14 TKVDQLRPGTSGHTLTVKVVST---KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
T++ LR G +++ +V+ T KMV K RG T ++E +VGDE+G + T
Sbjct: 6 TRIMDLREGLRNVSISGRVLETGEPKMVETK-RGPAT------LSEAVVGDESGRVKVTL 58
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKED 121
+KEG V + A ++G +++ V + +E + + ED
Sbjct: 59 WGSHAGTLKEGEAVRIEGAWTTSYRGKVQVNVGRESTIEKVDSEDVPQAED 109
>gi|409723039|ref|ZP_11270394.1| replication factor A [Halococcus hamelinensis 100A6]
Length = 431
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 22 GTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLMKE- 80
G S +LT V+ T V R DG++ R++ +GDETG + T +DQ +L++E
Sbjct: 128 GQSDVSLTGIVLDTDSVRTFDRDDGSE---GRVSNLTLGDETGRVRVTLWDDQTELVEEL 184
Query: 81 --GTTVILRNAKIDMFKGSMRL 100
GTTV L + + G + L
Sbjct: 185 SPGTTVELVDGYVRERNGDLEL 206
>gi|448356409|ref|ZP_21545142.1| replication factor A [Natrialba chahannaoensis JCM 10990]
gi|445653442|gb|ELZ06313.1| replication factor A [Natrialba chahannaoensis JCM 10990]
Length = 490
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQV 75
V+ L G S L V+ T V R DG++ +++ ++GD TG + T ++Q
Sbjct: 164 VESLSLGLSNVNLVGLVLDTGTVRTFDRDDGSE---GKVSNLVLGDSTGRVRVTLWDEQA 220
Query: 76 DLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL E GTTV + + + GS+ L V G VE + V E ++ IE
Sbjct: 221 DLATEIETGTTVEVVDGYVKERDGSLELHVGNRGAVEEVDAEVEYVPESTSIESIE 276
>gi|448637993|ref|ZP_21676044.1| replication factor A [Haloarcula sinaiiensis ATCC 33800]
gi|448655003|ref|ZP_21681855.1| replication factor A [Haloarcula californiae ATCC 33799]
gi|445763879|gb|EMA15053.1| replication factor A [Haloarcula sinaiiensis ATCC 33800]
gi|445765452|gb|EMA16590.1| replication factor A [Haloarcula californiae ATCC 33799]
Length = 488
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMI---IFTA 70
+ +D L G S TL V+ T + R DG++ R++ +GDETG I ++
Sbjct: 163 SSIDALTMGQSDVTLRGLVLDTDSIRTFDRDDGSE---GRVSNLTLGDETGRIRVTLWDD 219
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
R D+ D + G V + + + GS+ L V G V+ E
Sbjct: 220 RADRADELDAGAAVEIIDGYVRERDGSLELHVGDQGAVDEVE 261
>gi|255513394|gb|EET89660.1| nucleic acid binding OB-fold tRNA/helicase-type [Candidatus
Micrarchaeum acidiphilum ARMAN-2]
Length = 123
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 15 KVDQLRPGTSGHTLTVKVVST----KMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
K+ +L+ G S + KV ++V + G+ ++ +A + D+TG I +
Sbjct: 2 KISELKAGASNVEVEAKVTQKDEPREVVTKYGK-------RLSVANITLKDDTGSISMSL 54
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV 110
+D + G V + N ++ F+G+ +L+ K+G++EV
Sbjct: 55 WGKDIDSVNVGDVVKITNGYVNEFRGTPQLSTGKFGKLEV 94
>gi|448457207|ref|ZP_21595702.1| replication factor A [Halorubrum lipolyticum DSM 21995]
gi|445810788|gb|EMA60803.1| replication factor A [Halorubrum lipolyticum DSM 21995]
Length = 502
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L +V+ T + R DG++ R+A VGDETG + T +D+
Sbjct: 164 RVEDLSLGASDVDLVGQVLDTDSIRTFDRDDGSE---GRVANLTVGDETGRVRVTLWDDK 220
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL E V + + + G + L V G VE E V E +++ +E
Sbjct: 221 ADLADEFEPAEVVEVGDGYVRERDGDLELHVGDRGTVERVEEDVEYVPETTDIAELE 277
>gi|452208903|ref|YP_007489017.1| Replication protein A [Methanosarcina mazei Tuc01]
gi|452098805|gb|AGF95745.1| Replication protein A [Methanosarcina mazei Tuc01]
Length = 421
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 58 LVGDETGMIIFT-ARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE-VAEP 113
L+GDETG+I FT +N ++ L+++G + +LR+ + + ++ V+K +E ++EP
Sbjct: 105 LLGDETGIIKFTIWKNAELPLLEQGESYLLRSIVVGEYNDRFQVQVNKNSSIEKLSEP 162
>gi|20093424|ref|NP_619499.1| replication factor A [Methanosarcina acetivorans C2A]
gi|19918797|gb|AAM07979.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 484
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
K++ + P T +VVS V + R DGT R+ +VGDETG + T ++
Sbjct: 59 KIENITPETGPVNFIARVVSVFDVKEFTRNDGTI---GRVGNLIVGDETGKLKLTLWDNM 115
Query: 75 VDLMKEG 81
DL+K G
Sbjct: 116 ADLIKAG 122
>gi|448316289|ref|ZP_21505905.1| hypothetical protein C492_07755 [Natronococcus jeotgali DSM 18795]
gi|445608789|gb|ELY62616.1| hypothetical protein C492_07755 [Natronococcus jeotgali DSM 18795]
Length = 285
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 58 LVGDETGMIIFTA-RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
L+ D+T I FT +N + EG TV LRN K + LAV W R+E
Sbjct: 223 LIADDTEKIKFTVWKNSYQTKVSEGETVRLRNVKKNWHNECCNLAVTGWSRIE 275
>gi|313127408|ref|YP_004037678.1| single-stranded DNA-binding protein [Halogeometricum borinquense
DSM 11551]
gi|448288118|ref|ZP_21479319.1| replication factor A [Halogeometricum borinquense DSM 11551]
gi|312293773|gb|ADQ68233.1| single-stranded DNA-binding protein [Halogeometricum borinquense
DSM 11551]
gi|445570157|gb|ELY24723.1| replication factor A [Halogeometricum borinquense DSM 11551]
Length = 486
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L +V+ST V R DG++ R+A +GD TG I T +D+
Sbjct: 163 RVEDLSLGLSDVNLKGRVLSTDSVRTFDRDDGSE---GRVANLTLGDSTGRIRVTLWDDK 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVE 109
DL E TV + + + GS+ L V G +E
Sbjct: 220 ADLAAEFDTDITVEVVDGYVRERDGSLELHVGNRGTLE 257
>gi|222479058|ref|YP_002565295.1| replication factor A [Halorubrum lacusprofundi ATCC 49239]
gi|222451960|gb|ACM56225.1| replication factor A [Halorubrum lacusprofundi ATCC 49239]
Length = 424
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 11 PVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTA 70
P VD++ G T+TV+V++ + +GD +R+ IA DETG+I +TA
Sbjct: 57 PDSVDVDEITTDHDGVTVTVRVLTQGTRTIRYQGDDLTIREGEIA-----DETGVISYTA 111
Query: 71 RNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
D + G ++ + NA + ++G L ++ V +A+
Sbjct: 112 WQDF--GFEPGDSLTMGNAGVREWEGEPELNLNDSTTVAIAD 151
>gi|389845971|ref|YP_006348210.1| replication factor A [Haloferax mediterranei ATCC 33500]
gi|448616414|ref|ZP_21665124.1| replication factor A [Haloferax mediterranei ATCC 33500]
gi|388243277|gb|AFK18223.1| replication factor A [Haloferax mediterranei ATCC 33500]
gi|445751069|gb|EMA02506.1| replication factor A [Haloferax mediterranei ATCC 33500]
Length = 487
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L ++ T V R DGT+ R++ +GD TG I T +++
Sbjct: 163 RVEDLALGLSDVNLEGTILDTGTVRTFDRDDGTE---GRVSNLSIGDPTGRIRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL++E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLVEELETGESVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIEALE 276
>gi|359417778|ref|ZP_09209847.1| single-stranded DNA-binding protein [Candidatus Haloredivivus sp.
G17]
gi|358031871|gb|EHK00706.1| single-stranded DNA-binding protein [Candidatus Haloredivivus sp.
G17]
Length = 99
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 16 VDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQV 75
V++L P +T K+ L R T+ Q +I + DETG I T +++
Sbjct: 6 VEELSPEADKVEITGKISE----LPTPRAVSTRYGQKKIVTVVFEDETGSIDLTLWEEEI 61
Query: 76 DLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE 112
D ++EG+ V ++ A + + ++L + + G +E E
Sbjct: 62 DAIEEGSKVHIQGAYVREWAEDIQLNIGRDGDIEQVE 98
>gi|84490268|ref|YP_448500.1| replication factor A [Methanosphaera stadtmanae DSM 3091]
gi|84373587|gb|ABC57857.1| predicted ssDNA-binding protein [Methanosphaera stadtmanae DSM
3091]
Length = 793
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 31 KVVSTKMVLQKGRGDGT--QVRQMRIAECLVGDETGMIIFTARNDQVDLMKE-GTTVILR 87
++++T + RGDG+ Q++ + +A DETG++ + +++VD+ ++ G + +
Sbjct: 431 RIITTNDTREFERGDGSKGQIKSIELA-----DETGIVRTSLWDEKVDITEKLGDAIKIE 485
Query: 88 NAKIDMFKGSMRLAVDKWGRV 108
NA+ + +G M L+V K R+
Sbjct: 486 NARTRIGQGQMELSVGKSSRI 506
>gi|312080784|ref|XP_003142748.1| hypothetical protein LOAG_07166 [Loa loa]
gi|307762090|gb|EFO21324.1| hypothetical protein LOAG_07166 [Loa loa]
Length = 182
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 46 GTQVRQMRIAECLVGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKW 105
G VR +R+A D TG ++ ND D + G LRN +FKGS+ L+ K
Sbjct: 39 GHDVRTIRVA-----DPTGSVLMGVWNDVGDNISAGDIWRLRNGFTTIFKGSLSLSYGKM 93
Query: 106 GRV 108
G +
Sbjct: 94 GEL 96
>gi|448684242|ref|ZP_21692707.1| replication factor A [Haloarcula japonica DSM 6131]
gi|445783115|gb|EMA33951.1| replication factor A [Haloarcula japonica DSM 6131]
Length = 486
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
+ +D L G S +L V+ T + R DG++ R++ +GDETG I T +D
Sbjct: 163 SSIDALTMGQSDVSLRGLVLDTDSIRTFDRDDGSE---GRVSNLTLGDETGRIRVTLWDD 219
Query: 74 QVDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYE 130
+ D +E G V + + + GS+ L V G V+ E + N +S +E E
Sbjct: 220 RADRAEELDAGAAVEIIDGYVRERDGSLELHVGDQGAVDEVEDDVAFEPDANPISEVELE 279
>gi|448543522|ref|ZP_21625076.1| replication factor A [Haloferax sp. ATCC BAA-646]
gi|448550614|ref|ZP_21628917.1| replication factor A [Haloferax sp. ATCC BAA-645]
gi|448559156|ref|ZP_21633408.1| replication factor A [Haloferax sp. ATCC BAA-644]
gi|445706245|gb|ELZ58128.1| replication factor A [Haloferax sp. ATCC BAA-646]
gi|445711119|gb|ELZ62913.1| replication factor A [Haloferax sp. ATCC BAA-645]
gi|445711526|gb|ELZ63317.1| replication factor A [Haloferax sp. ATCC BAA-644]
Length = 491
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 15 KVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQ 74
+V+ L G S L K++ V R DGT+ R++ VGD TG + T +++
Sbjct: 163 RVEDLALGLSDVNLEGKILDAGTVRTFDRDDGTE---GRVSNLSVGDPTGRVRVTLWDER 219
Query: 75 VDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIE 128
DL +E G +V + + + GS+ L V G VEV + V E ++ +E
Sbjct: 220 ADLAEELEPGQSVEVVDGYVRERDGSLELHVGSRGAVEVIDEDIEYVPETTDIETLE 276
>gi|329764702|ref|ZP_08256297.1| hypothetical protein Nlim_0043 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393796712|ref|ZP_10380076.1| hypothetical protein CNitlB_10419 [Candidatus Nitrosoarchaeum
limnia BG20]
gi|393796931|ref|ZP_10380295.1| hypothetical protein CNitlB_11629 [Candidatus Nitrosoarchaeum
limnia BG20]
gi|329138752|gb|EGG42993.1| hypothetical protein Nlim_0043 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 101
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 13 FTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVR-----QMRIAECLVGDETGMII 67
F V Q++ SG L +V K +GD V + + + ++ DE+ I
Sbjct: 4 FQSVSQVKKMRSGINLKAEV--------KSKGDPRTVNLKTGGTVDVCDAVIADESDEIK 55
Query: 68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEV 110
T D + + G V++ N + FKG + L K+G++E+
Sbjct: 56 LTLWGDDIKAVNVGDVVVITNGYTNEFKGEVSLTKGKFGKMEI 98
>gi|448664770|ref|ZP_21684408.1| replication factor A [Haloarcula amylolytica JCM 13557]
gi|445774357|gb|EMA25378.1| replication factor A [Haloarcula amylolytica JCM 13557]
Length = 488
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 14 TKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARND 73
+ +D L G S TL V+ T + R DG++ R++ +GDETG I T +D
Sbjct: 163 SSIDALTMGQSDVTLRGLVLDTDTIRTFDRDDGSE---GRVSNLTLGDETGRIRVTLWDD 219
Query: 74 QVDLMKE---GTTVILRNAKIDMFKGSMRLAVDKWGRV-EVAEPANFTVKEDNNLSLIEY 129
+ D +E G V + + + GS+ L V G V EV + F D + E
Sbjct: 220 RADRAEELDAGAAVEIIDGYVRERDGSLELHVGDQGAVDEVEDDVAFEPDAD---PIAEV 276
Query: 130 ELVNVVE 136
EL V+
Sbjct: 277 ELEETVD 283
>gi|448666482|ref|ZP_21685127.1| replication factor A [Haloarcula amylolytica JCM 13557]
gi|445771613|gb|EMA22669.1| replication factor A [Haloarcula amylolytica JCM 13557]
Length = 426
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 19 LRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVGDETGMIIFTARNDQVDLM 78
L PG G T+ V+V+ + + GR DG + I ++GDE+G + FT D +
Sbjct: 171 LAPGDRGITVEVQVLECEQKVIDGR-DG----ETTILSGVLGDESGRLPFTDWEPH-DEI 224
Query: 79 KEGTTVILRNAKIDMFKGSMRLAVDKWG-------RVEVAEPA 114
+EG +V L + F+G+ + V ++ VEVAE A
Sbjct: 225 EEGASVRLEETFVREFRGAPSVNVSEFSAVTALDRAVEVAESA 267
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,925,339,579
Number of Sequences: 23463169
Number of extensions: 69498329
Number of successful extensions: 155095
Number of sequences better than 100.0: 353
Number of HSP's better than 100.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 154727
Number of HSP's gapped (non-prelim): 375
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)