BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032584
MAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLPPRSSTPPFSSSIKQVSESRRFPLLQV
RASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLV
CNFQISLPLSFFVMFRR

High Scoring Gene Products

Symbol, full name Information P value
AT4G01150 protein from Arabidopsis thaliana 9.7e-25
AT1G52220 protein from Arabidopsis thaliana 3.9e-05
AT4G38100 protein from Arabidopsis thaliana 0.00012

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032584
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2125018 - symbol:AT4G01150 "AT4G01150" species...   282  9.7e-25   1
TAIR|locus:2037435 - symbol:AT1G52220 "AT1G52220" species...    97  3.9e-05   1
TAIR|locus:2121065 - symbol:AT4G38100 species:3702 "Arabi...    95  0.00012   1


>TAIR|locus:2125018 [details] [associations]
            symbol:AT4G01150 "AT4G01150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009941
            GO:GO:0009535 GO:GO:0010287 EMBL:AL161491 EMBL:AF007269
            HOGENOM:HOG000239454 InterPro:IPR025564 Pfam:PF14159 EMBL:U19925
            EMBL:AY091679 EMBL:AF389292 IPI:IPI00529234 PIR:T01726
            RefSeq:NP_567210.1 UniGene:At.48817 IntAct:O04616 STRING:O04616
            PaxDb:O04616 PRIDE:O04616 EnsemblPlants:AT4G01150.1 GeneID:828181
            KEGG:ath:AT4G01150 TAIR:At4g01150 eggNOG:NOG85035 InParanoid:O04616
            OMA:IYGGGAI PhylomeDB:O04616 ProtClustDB:CLSN2917477
            Genevestigator:O04616 Uniprot:O04616
        Length = 164

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 65/123 (52%), Positives = 85/123 (69%)

Query:     1 MAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPL 57
             +AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  L
Sbjct:     5 VAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVEL 58

Query:    58 LQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSV 117
             L+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV
Sbjct:    59 LKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSV 117

Query:   118 PLV 120
             PL+
Sbjct:   118 PLL 120


>TAIR|locus:2037435 [details] [associations]
            symbol:AT1G52220 "AT1G52220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0010103
            "stomatal complex morphogenesis" evidence=RCA] [GO:0010207
            "photosystem II assembly" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0035304
            "regulation of protein dephosphorylation" evidence=RCA] [GO:0043085
            "positive regulation of catalytic activity" evidence=RCA]
            EMBL:CP002684 GO:GO:0009535 UniGene:At.16830 EMBL:AC022354
            InterPro:IPR025564 Pfam:PF14159 EMBL:AF410269 EMBL:AY097365
            IPI:IPI00529609 PIR:B96562 RefSeq:NP_564603.1 IntAct:Q9M812
            STRING:Q9M812 PRIDE:Q9M812 EnsemblPlants:AT1G52220.1 GeneID:841652
            KEGG:ath:AT1G52220 TAIR:At1g52220 InParanoid:Q9M812 OMA:AVWASAN
            PhylomeDB:Q9M812 ProtClustDB:CLSN2688710 Genevestigator:Q9M812
            Uniprot:Q9M812
        Length = 156

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query:    58 LQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSV 117
             L V+AS     S+ D D + S ++  WD  E++  ++  G   IVA+W S  ++ AI+ +
Sbjct:    52 LMVKASGESSDSSTDLD-VVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKL 110

Query:   118 PLVCN-FQI 125
             P++ + F++
Sbjct:   111 PVISSGFEL 119


>TAIR|locus:2121065 [details] [associations]
            symbol:AT4G38100 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009535 InterPro:IPR025564
            Pfam:PF14159 UniGene:At.47991 EMBL:AY086071 EMBL:BT025771
            IPI:IPI00519835 RefSeq:NP_568035.1 UniGene:At.31205 STRING:Q8LDD3
            PaxDb:Q8LDD3 PRIDE:Q8LDD3 EnsemblPlants:AT4G38100.1 GeneID:829966
            KEGG:ath:AT4G38100 TAIR:At4g38100 eggNOG:NOG282488
            HOGENOM:HOG000239512 InParanoid:Q8LDD3 OMA:ELCTRST PhylomeDB:Q8LDD3
            ProtClustDB:CLSN2689814 Genevestigator:Q8LDD3 Uniprot:Q8LDD3
        Length = 193

 Score = 95 (38.5 bits), Expect = 0.00012, P = 0.00012
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query:    62 ASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVPLVC 121
             A  +E+  T  A E  +D+K   D+ +  S +LLYG GAIVA++L+S IV ++ ++PL  
Sbjct:    93 APQAEDEET-QALEFLNDIK--LDSDKTYS-ILLYGSGAIVALYLTSAIVSSLEAIPLFP 148

Query:   122 NFQISLPLSFFVMF 135
                  + L + + F
Sbjct:   149 KLMEVVGLGYTLWF 162


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.130   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       125   0.00091  102 3  11 22  0.48    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.34u 0.18s 13.52t   Elapsed:  00:00:00
  Total cpu time:  13.35u 0.18s 13.53t   Elapsed:  00:00:00
  Start:  Thu May  9 17:06:27 2013   End:  Thu May  9 17:06:27 2013

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