BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032585
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224129716|ref|XP_002328785.1| predicted protein [Populus trichocarpa]
gi|222839083|gb|EEE77434.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 15 LIFPKFNDNRKFHLNRTRNFGQRIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSR 74
L+FP F + L+ + +R+ AL S+ E PNA RRK D LWRGGFSLGVDLGLSR
Sbjct: 42 LLFPNFTTS-SLQLDSDKPCRRRLRALLSIHEIPPNALRRKNDPLWRGGFSLGVDLGLSR 100
Query: 75 TGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREVI 111
+G+ALSKGF VRPLTVL+LRG+KLEL+LLEIA+ E +
Sbjct: 101 SGVALSKGFTVRPLTVLELRGQKLELRLLEIAENEEV 137
>gi|297734533|emb|CBI16584.3| unnamed protein product [Vitis vinifera]
Length = 679
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 37 RIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGE 96
RI A+S + E LPNA RRK + W GGFSLGVDLG+SRTGLALSKGF VRPL+VLKLRG+
Sbjct: 485 RIRAVS-LNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPLSVLKLRGQ 543
Query: 97 KLELQLLEIAQREVI 111
KLELQLLEIA RE +
Sbjct: 544 KLELQLLEIAGREEV 558
>gi|359489199|ref|XP_002275849.2| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
Length = 229
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 37 RIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGE 96
RI A+S + E LPNA RRK + W GGFSLGVDLG+SRTGLALSKGF VRPL+VLKLRG+
Sbjct: 35 RIRAVS-LNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPLSVLKLRGQ 93
Query: 97 KLELQLLEIAQREVI 111
KLELQLLEIA RE +
Sbjct: 94 KLELQLLEIAGREEV 108
>gi|297844086|ref|XP_002889924.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335766|gb|EFH66183.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 238
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 74/113 (65%), Gaps = 18/113 (15%)
Query: 1 MCSLQS----------QHFLNSPLLIFPKFNDNRKFHLNRTRNFGQRIGALSSVEEFLPN 50
MCSL S Q ++N+PL+ P+ + +RN + A +S++E PN
Sbjct: 1 MCSLHSLSSVAISFRTQKYVNTPLV--PRLSSIG------SRNNPLPLRAATSIDEIPPN 52
Query: 51 ATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLL 103
A RRK D WRGGFSLGVDLGLSRTG+A+SKG+ V+PLTVLK RG+KLE +LL
Sbjct: 53 AVRRKIDRDWRGGFSLGVDLGLSRTGVAISKGYTVKPLTVLKSRGQKLETRLL 105
>gi|356506432|ref|XP_003521987.1| PREDICTED: putative Holliday junction resolvase-like [Glycine max]
Length = 226
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
Query: 37 RIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGE 96
R+ AL+ ++E PNA R+K++ WRGGFSLG+DLGL+RTGLALSKGF +RPLTVL+LRG+
Sbjct: 34 RVKALT-LDELPPNALRKKREPQWRGGFSLGLDLGLARTGLALSKGFSIRPLTVLELRGQ 92
Query: 97 KLELQLLEIAQREVI 111
KLE+Q++ IA+ E +
Sbjct: 93 KLEVQIINIAEEEEV 107
>gi|449431960|ref|XP_004133768.1| PREDICTED: putative Holliday junction resolvase-like [Cucumis
sativus]
gi|449522992|ref|XP_004168509.1| PREDICTED: putative Holliday junction resolvase-like [Cucumis
sativus]
Length = 235
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Query: 41 LSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLEL 100
+SS+E PNA RRK D WRGGFSLGVDLG SRTGLALSKGF RPLTVL+LRG+KLE
Sbjct: 50 ISSIE-LPPNALRRKLDPHWRGGFSLGVDLGTSRTGLALSKGFSTRPLTVLELRGQKLEA 108
Query: 101 QLLEIAQRE 109
+L+EIA++E
Sbjct: 109 KLIEIAEQE 117
>gi|79317769|ref|NP_001031028.1| putative holliday junction resolvase [Arabidopsis thaliana]
gi|332190735|gb|AEE28856.1| putative holliday junction resolvase [Arabidopsis thaliana]
Length = 254
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 55/64 (85%)
Query: 40 ALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLE 99
A++S++E PNA RRK D WRGGFSLGVDLGLSRTG+A+SKG+ V+PLTVLK RG+KLE
Sbjct: 58 AVTSIDEIPPNAVRRKIDRNWRGGFSLGVDLGLSRTGIAISKGYTVKPLTVLKSRGQKLE 117
Query: 100 LQLL 103
+LL
Sbjct: 118 TRLL 121
>gi|255573708|ref|XP_002527775.1| hydrolase, acting on ester bonds, putative [Ricinus communis]
gi|223532810|gb|EEF34585.1| hydrolase, acting on ester bonds, putative [Ricinus communis]
Length = 239
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 72/114 (63%), Gaps = 13/114 (11%)
Query: 1 MCSLQSQHFLNS---PLLI--FPKFNDNRKF------HLNRTRNFGQRIGALSSVEEFLP 49
MCSL+S ++ PL I PK + F + NF R A+ S EE P
Sbjct: 3 MCSLKSFCIQSTQLFPLSINSLPKVINTSAFLRQSLPQICIHNNFKLR--AVLSTEEVPP 60
Query: 50 NATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLL 103
NA RR+ D WRGGFSLG+DLGLSRTGLA+SKGF +PLTVL+LRG+KLE +LL
Sbjct: 61 NAARRRSDPQWRGGFSLGIDLGLSRTGLAISKGFSFKPLTVLELRGQKLETRLL 114
>gi|242035117|ref|XP_002464953.1| hypothetical protein SORBIDRAFT_01g029390 [Sorghum bicolor]
gi|241918807|gb|EER91951.1| hypothetical protein SORBIDRAFT_01g029390 [Sorghum bicolor]
Length = 214
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
Query: 35 GQRIGALSSVEEFLPNATRRKKDSLWRGG-FSLGVDLGLSRTGLALSKGFCV-RPLTVLK 92
G+ GA LPNA RR +D LW GG FSLGVDLG +RTGLA+ +G + RPLTVLK
Sbjct: 43 GRTEGAGELPAPLLPNARRRGRDPLWHGGGFSLGVDLGDARTGLAVGRGITLPRPLTVLK 102
Query: 93 LRGEKLELQLLEIAQR----EVILG 113
LRG+KLEL LL++A++ E+I+G
Sbjct: 103 LRGQKLELTLLDVARQQEADELIIG 127
>gi|414867730|tpg|DAA46287.1| TPA: holliday junction resolvase [Zea mays]
Length = 235
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 13/85 (15%)
Query: 49 PNATRRKKDSLWRGG-FSLGVDLGLSRTGLALSKGFC-VRPLTVLKLRGEKLELQLLEIA 106
PNA RR +D LW GG FSLGVDLG +RTGLA+ +G RPLTVL+LRG+KLEL LL++A
Sbjct: 57 PNARRRGRDPLWHGGGFSLGVDLGDARTGLAIGRGITFPRPLTVLRLRGQKLELALLDVA 116
Query: 107 QR----EVIL-------GSYEPQLN 120
++ E+I+ GS PQ N
Sbjct: 117 RQQEADELIIGLPVSADGSETPQSN 141
>gi|414867731|tpg|DAA46288.1| TPA: hypothetical protein ZEAMMB73_583211 [Zea mays]
Length = 236
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 13/85 (15%)
Query: 49 PNATRRKKDSLWRGG-FSLGVDLGLSRTGLALSKGFC-VRPLTVLKLRGEKLELQLLEIA 106
PNA RR +D LW GG FSLGVDLG +RTGLA+ +G RPLTVL+LRG+KLEL LL++A
Sbjct: 57 PNARRRGRDPLWHGGGFSLGVDLGDARTGLAIGRGITFPRPLTVLRLRGQKLELALLDVA 116
Query: 107 QR----EVIL-------GSYEPQLN 120
++ E+I+ GS PQ N
Sbjct: 117 RQQEADELIIGLPVSADGSETPQSN 141
>gi|226500782|ref|NP_001149481.1| holliday junction resolvase [Zea mays]
gi|195627468|gb|ACG35564.1| holliday junction resolvase [Zea mays]
Length = 235
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 13/85 (15%)
Query: 49 PNATRRKKDSLWRGG-FSLGVDLGLSRTGLALSKGFC-VRPLTVLKLRGEKLELQLLEIA 106
PNA RR +D LW GG FSLGVDLG +RTGLA+ +G RPLTVL+LRG+KLEL LL++A
Sbjct: 57 PNARRRGRDPLWHGGGFSLGVDLGDARTGLAIGRGITFPRPLTVLRLRGQKLELALLDVA 116
Query: 107 QR----EVIL-------GSYEPQLN 120
++ E+I+ GS PQ N
Sbjct: 117 RQQEADELIIGLPVSADGSETPQSN 141
>gi|357451423|ref|XP_003595988.1| hypothetical protein MTR_2g064700 [Medicago truncatula]
gi|355485036|gb|AES66239.1| hypothetical protein MTR_2g064700 [Medicago truncatula]
Length = 116
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Query: 28 LNRTRNFGQRIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRP 87
LN T+N + ++EE PNA RRKKD WRGGFSLGVDLG++RTG+ALSKGF RP
Sbjct: 26 LNSTQNLKTPL----TLEELPPNALRRKKDEEWRGGFSLGVDLGMARTGIALSKGFTFRP 81
Query: 88 LTVL 91
LT +
Sbjct: 82 LTYV 85
>gi|147819080|emb|CAN65349.1| hypothetical protein VITISV_000639 [Vitis vinifera]
Length = 213
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Query: 37 RIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLT 89
RI A+S + E LPNA RRK + W GGFSLGVDLG+SRTGLALSKGF VRPL+
Sbjct: 39 RIRAVS-LNEILPNALRRKHNPHWTGGFSLGVDLGMSRTGLALSKGFSVRPLS 90
>gi|115483352|ref|NP_001065346.1| Os10g0555200 [Oryza sativa Japonica Group]
gi|13194228|gb|AAK15446.1|AC037426_8 hypothetical protein [Oryza sativa Japonica Group]
gi|31433450|gb|AAP54963.1| expressed protein [Oryza sativa Japonica Group]
gi|113639878|dbj|BAF27183.1| Os10g0555200 [Oryza sativa Japonica Group]
gi|125575650|gb|EAZ16934.1| hypothetical protein OsJ_32416 [Oryza sativa Japonica Group]
gi|215697176|dbj|BAG91170.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 64/112 (57%), Gaps = 19/112 (16%)
Query: 24 RKFHLNRTRNFGQRIGALSSVE---EFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALS 80
R N R GA S E LPNA RR+ GFSLGVDLG +RTG+A+
Sbjct: 36 RSVRANAIRASPPSNGAGSPDELPAALLPNAARRRDGC----GFSLGVDLGEARTGVAVG 91
Query: 81 KGFCV-RPLTVLKLRGEKLELQLLEIAQR----EVIL-------GSYEPQLN 120
+G + RPLTVLKLRG+KLEL LL+IAQ+ E+I+ GS PQ N
Sbjct: 92 RGITLPRPLTVLKLRGQKLELMLLDIAQQQEADELIVGLPVSADGSETPQSN 143
>gi|125532910|gb|EAY79475.1| hypothetical protein OsI_34603 [Oryza sativa Indica Group]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 64/114 (56%), Gaps = 23/114 (20%)
Query: 24 RKFHLNRTRNFGQRIGALSSVE---EFLPNATRRKKDSLWRGG--FSLGVDLGLSRTGLA 78
R N R GA S E LPNA RR R G FSLGVDLG +RTG+A
Sbjct: 36 RSVRANAIRASPPSNGAGSPDELPAALLPNAARR------RDGCRFSLGVDLGEARTGVA 89
Query: 79 LSKGFCV-RPLTVLKLRGEKLELQLLEIAQR----EVIL-------GSYEPQLN 120
+ +G + RPLTVLKLRG+KLEL LL+IAQ+ E+I+ GS PQ N
Sbjct: 90 VGRGITLPRPLTVLKLRGQKLELMLLDIAQQQEADELIVGLPVSADGSETPQSN 143
>gi|357141055|ref|XP_003572063.1| PREDICTED: putative Holliday junction resolvase-like [Brachypodium
distachyon]
Length = 233
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 10/71 (14%)
Query: 49 PNATRRKKDSLWRGG-FSLGVDLGLSRTGLALSKGFC-VRPLTVLKLRGEKLELQLLEIA 106
PNA + LW GG FSLGVDLG +RTGLA+ +G RPLTVLKLRG+KLEL LL++A
Sbjct: 58 PNA----RQPLWHGGGFSLGVDLGDARTGLAVGRGITQPRPLTVLKLRGQKLELVLLDVA 113
Query: 107 QR----EVILG 113
Q E+I+G
Sbjct: 114 QEQEADELIVG 124
>gi|357451417|ref|XP_003595985.1| hypothetical protein MTR_2g064670 [Medicago truncatula]
gi|355485033|gb|AES66236.1| hypothetical protein MTR_2g064670 [Medicago truncatula]
Length = 83
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 13 PLLIFPKF--NDNRKFHLNRTRNFGQRIGALSSVEEFLPNATRRKKDSLWRGGFSLGVDL 70
PL +F F +++ K N Q + ++EE PNA RRKKD+ WRGGFSLGVDL
Sbjct: 13 PLKLFHSFQPSNHAKIQSLSKLNSTQSLKTALTLEELPPNALRRKKDAEWRGGFSLGVDL 72
Query: 71 GLSRTGLALSK 81
G++RTG+AL+K
Sbjct: 73 GMARTGIALNK 83
>gi|302768497|ref|XP_002967668.1| hypothetical protein SELMODRAFT_408862 [Selaginella moellendorffii]
gi|300164406|gb|EFJ31015.1| hypothetical protein SELMODRAFT_408862 [Selaginella moellendorffii]
Length = 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 47 FLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALS-KGFCVRPLTVLKLRGEKLELQLLEI 105
LPNA +K + S+G+D GL RTG+A++ G RPL+V KL+G+ L +LL +
Sbjct: 8 ILPNARLKKSLETRKLRRSVGIDYGLERTGIAVTFCGLAPRPLSVSKLKGDNLIKKLLSV 67
Query: 106 AQRE 109
A++E
Sbjct: 68 AKKE 71
>gi|168021153|ref|XP_001763106.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685589|gb|EDQ71983.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 172
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 50 NATRRKKDSLWRGGFSLGVDLGLSRTGLALS-KGFCVRPLTVLKLRGEKLELQLLEI 105
NA R + RG ++GVDLG ++TGLA+S G+ RPLTV++ RG+KL +L++
Sbjct: 1 NAQRARGGERVRG-HTVGVDLGDAKTGLAISLGGYAPRPLTVVRQRGDKLLETILQV 56
>gi|412988551|emb|CCO17887.1| predicted protein [Bathycoccus prasinos]
Length = 200
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
Query: 65 SLGVDLGLSRTGLALSK-GFCVRPLTVLKLRGE-KLEL--QLLEIAQRE 109
+LG+D GLS+TGLA+S GF RPL L +G+ ++EL +++++A+RE
Sbjct: 19 ALGIDYGLSKTGLAISSGGFAPRPLESLLCKGKSRVELIREIVDVAERE 67
>gi|452823591|gb|EME30600.1| DNA binding / hydrolase [Galdieria sulphuraria]
Length = 249
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 60 WRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLK 92
+ G ++GVD G+SR G+A+S GF RPLT +K
Sbjct: 59 FTGRKAVGVDYGMSRVGVAVSVGFSPRPLTCIK 91
>gi|219112769|ref|XP_002178136.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411021|gb|EEC50950.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 190
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLK 92
G S+GVD GL RTG+A++ G+ +PLT+LK
Sbjct: 17 GVKSIGVDYGLVRTGVAVTVGYDPKPLTILK 47
>gi|410953552|ref|XP_003983434.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM65C [Felis catus]
Length = 946
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 36 QRIGALSSVEEFLPNATRRKKD-SLWRGGFSLGVDLGLSRTGL--ALSKGFCVRPLTVLK 92
+++ +S+EE +P ATRRK LWRG G L S T L L K F R
Sbjct: 668 EKVSKAASIEEIVPQATRRKGCLKLWRGCTEPGRVLSCSGTTLLNQLKKTFLHR------ 721
Query: 93 LRGE---KLELQLLEIAQREVILGSYEPQLNLLSKKKLRWFYY 132
+RG+ +LE+ + ++ V G P L ++ + WF +
Sbjct: 722 VRGKYPGQLEIACRRLLEQVVSCGGLLPGAGLPEEQTVTWFQF 764
>gi|423299680|ref|ZP_17277705.1| hypothetical protein HMPREF1057_00846 [Bacteroides finegoldii
CL09T03C10]
gi|408473489|gb|EKJ92011.1| hypothetical protein HMPREF1057_00846 [Bacteroides finegoldii
CL09T03C10]
Length = 396
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 1 MCSLQSQHF-----LNSPLLIFPKF---------NDNRKFHLNRT-RNFGQRIGALSSVE 45
M S+ +H+ +++ L P F N R +RT +N I L +
Sbjct: 115 MESVSGEHYDIVAIMDADNLTSPDFLAEINRAFDNGARSVQAHRTGKNMNTDISVLDGIS 174
Query: 46 EFLPNATRRKKDSLWRGGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEI 105
E + N R G +LG+ LS +G+A + + + +L+ GE EL++L +
Sbjct: 175 EEINNGIFRS------GHNALGLSAALSGSGMAFEAEWFRKNVRLLETAGEDKELEVLLL 228
Query: 106 AQREVILGSYEPQLNLLSKK 125
QR I +Y PQ+ + +K
Sbjct: 229 RQR--IHTTYLPQIPVYDEK 246
>gi|119906104|ref|XP_594815.3| PREDICTED: protein FAM65C [Bos taurus]
gi|297482118|ref|XP_002692547.1| PREDICTED: protein FAM65C [Bos taurus]
gi|296480974|tpg|DAA23089.1| TPA: hypothetical protein BOS_13249 [Bos taurus]
Length = 947
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 36 QRIGALSSVEEFLPNATRRKKD-SLWRGGFSLGVDLGLSRTGL--ALSKGFCVRPLTVLK 92
+++ S+EE LP ATRRK LWRG G L T L L K F R
Sbjct: 669 EKVSKAMSIEEILPQATRRKGCLKLWRGCTGPGATLSCPGTALLDQLKKTFLHR------ 722
Query: 93 LRGE---KLELQLLEIAQREVILGSYEPQLNLLSKKKLRWFYY 132
+RG+ +LE + ++ V G P L ++ + WF +
Sbjct: 723 VRGKYPGQLETACHRLLEQVVSCGGLLPGAGLPEEQTITWFQF 765
>gi|256371740|ref|YP_003109564.1| Holliday junction resolvase YqgF [Acidimicrobium ferrooxidans DSM
10331]
gi|256008324|gb|ACU53891.1| Holliday junction resolvase YqgF [Acidimicrobium ferrooxidans DSM
10331]
Length = 138
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRG 95
GG +LGVDLG R G+A+++G PL V+ RG
Sbjct: 6 GGRALGVDLGTKRIGVAVAEGSLALPLEVIDARG 39
>gi|426242143|ref|XP_004014934.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM65C [Ovis aries]
Length = 827
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 36 QRIGALSSVEEFLPNATRRKKD-SLWRGGFSLGVDLGLSRTGL--ALSKGFCVRPLTVLK 92
+++ S+EE LP ATRR+ LWRG G L T L L K F R
Sbjct: 576 EKVSKAMSIEEILPQATRRRGCLKLWRGCTGPGTTLSCPGTALLDQLKKTFLHR------ 629
Query: 93 LRGE---KLELQLLEIAQREVILGSYEPQLNLLSKKKLRWFYY 132
+RG+ +LE+ + ++ V G P L ++ + WF +
Sbjct: 630 VRGKYPGQLEIACRRLLEQVVSCGGLLPGAGLPEEQTVTWFQF 672
>gi|262407895|ref|ZP_06084443.1| glycoside transferase family 2 [Bacteroides sp. 2_1_22]
gi|294646755|ref|ZP_06724378.1| glycosyltransferase, group 2 family protein [Bacteroides ovatus SD
CC 2a]
gi|294807714|ref|ZP_06766507.1| glycosyltransferase, group 2 family protein [Bacteroides
xylanisolvens SD CC 1b]
gi|336405385|ref|ZP_08586064.1| hypothetical protein HMPREF0127_03377 [Bacteroides sp. 1_1_30]
gi|345511627|ref|ZP_08791167.1| glycoside transferase family 2 [Bacteroides sp. D1]
gi|229443938|gb|EEO49729.1| glycoside transferase family 2 [Bacteroides sp. D1]
gi|262354703|gb|EEZ03795.1| glycoside transferase family 2 [Bacteroides sp. 2_1_22]
gi|292637915|gb|EFF56310.1| glycosyltransferase, group 2 family protein [Bacteroides ovatus SD
CC 2a]
gi|294445150|gb|EFG13824.1| glycosyltransferase, group 2 family protein [Bacteroides
xylanisolvens SD CC 1b]
gi|335937966|gb|EGM99860.1| hypothetical protein HMPREF0127_03377 [Bacteroides sp. 1_1_30]
Length = 397
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 3 SLQSQHFLNSPLLIFPKFNDNRKFHLNRT-RNFGQRIGALSSVEEFLPNATRRKKDSLWR 61
+L S HFL + F + R +RT +N I L + E + N R
Sbjct: 133 NLTSPHFLTAVNRAFD--SGVRCIQAHRTGQNLNTDISVLDGISEEINNGIFRS------ 184
Query: 62 GGFSLGVDLGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQREVILGSYEPQLNL 121
G +LG+ LS +G+A + + + +L+ GE EL++L + QR I +Y P++ +
Sbjct: 185 GHNALGLSAALSGSGMAFEADWFRKNVRLLETAGEDKELEVLLLQQR--IHTTYLPEIPI 242
Query: 122 LSKK 125
+K
Sbjct: 243 YDEK 246
>gi|431904238|gb|ELK09635.1| Serine/threonine-protein kinase LATS1 [Pteropus alecto]
Length = 1747
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 70 LGLSRTGLALSKGFCVRPLTVLKLRGEKLELQLLEIAQ-----RE-VILGSYEPQL 119
GL R+G AL+ CV P+ L+L+G L + LL I++ RE +LG+Y+ +
Sbjct: 1226 FGLHRSGFALTVPCCVPPVPGLRLQGLHLNMSLLMISENVKLAREYALLGNYDSAM 1281
>gi|402882261|ref|XP_003904666.1| PREDICTED: protein FAM65C-like, partial [Papio anubis]
Length = 834
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 36 QRIGALSSVEEFLPNATRRKKD-SLWRGGFSLGVDLGLSRTGL--ALSKGFCVRPLTVLK 92
+++ +S+EE +P A+RRK LWRG G L T L L K F R
Sbjct: 557 EKVSKATSIEEIIPQASRRKGCLKLWRGCTGPGRVLSCPATKLLNQLKKAFLHR------ 610
Query: 93 LRGE---KLELQLLEIAQREVILGSYEPQLNLLSKKKLRWFYY 132
+RG+ +LE+ + ++ V G P L ++ + WF +
Sbjct: 611 VRGKYPGQLEIVCRRLLEQVVSCGGLLPGAGLPEEQTITWFQF 653
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,147,619,349
Number of Sequences: 23463169
Number of extensions: 79939209
Number of successful extensions: 148538
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 148503
Number of HSP's gapped (non-prelim): 41
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 71 (32.0 bits)