Query 032585
Match_columns 137
No_of_seqs 123 out of 215
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 04:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iv0_A Hypothetical protein; r 99.8 3.9E-20 1.3E-24 132.3 6.4 70 63-132 1-84 (98)
2 1nu0_A Hypothetical protein YQ 99.8 5.1E-19 1.7E-23 133.1 8.0 72 63-134 3-88 (138)
3 1vhx_A Putative holliday junct 99.6 3.1E-15 1.1E-19 113.1 8.4 71 63-133 3-89 (150)
4 4ep4_A Crossover junction endo 96.5 0.0072 2.5E-07 46.4 6.8 51 63-113 1-70 (166)
5 1hjr_A Holliday junction resol 93.7 0.13 4.5E-06 38.8 5.9 47 63-109 1-58 (158)
6 3bzc_A TEX; helix-turn-helix, 79.1 5.3 0.00018 37.2 7.5 73 59-133 325-409 (785)
7 4gni_A Putative heat shock pro 75.7 1.7 5.9E-05 35.1 2.9 19 62-80 12-30 (409)
8 1dkg_D Molecular chaperone DNA 75.0 1.4 4.8E-05 35.1 2.2 17 64-80 3-19 (383)
9 3i33_A Heat shock-related 70 k 73.9 1.8 6.1E-05 34.8 2.5 19 62-80 22-40 (404)
10 3qfu_A 78 kDa glucose-regulate 73.9 1.9 6.3E-05 34.3 2.6 19 62-80 17-35 (394)
11 4b9q_A Chaperone protein DNAK; 66.3 3.4 0.00012 36.2 2.8 18 63-80 2-19 (605)
12 1yuw_A Heat shock cognate 71 k 62.1 4.3 0.00015 35.0 2.7 18 63-80 4-21 (554)
13 1b5f_B Protein (cardosin A); h 61.7 6 0.00021 25.6 2.8 19 62-80 68-86 (87)
14 2kho_A Heat shock protein 70; 60.9 4.4 0.00015 35.4 2.5 17 64-80 3-19 (605)
15 2v7y_A Chaperone protein DNAK; 59.5 5.6 0.00019 33.7 2.9 17 64-80 3-19 (509)
16 3djc_A Type III pantothenate k 50.2 71 0.0024 25.4 7.8 68 64-133 3-82 (266)
17 3vgl_A Glucokinase; ROK family 48.9 27 0.00093 27.3 5.1 18 64-81 3-20 (321)
18 4ehu_A Activator of 2-hydroxyi 48.1 11 0.00038 28.7 2.6 18 63-80 1-18 (276)
19 3d2f_A Heat shock protein homo 46.9 9.9 0.00034 34.0 2.5 17 64-80 3-19 (675)
20 2yhw_A Bifunctional UDP-N-acet 46.7 30 0.001 27.2 5.0 20 62-81 29-48 (343)
21 3qze_A DHDPS, dihydrodipicolin 45.6 11 0.00037 30.6 2.3 29 65-93 8-37 (314)
22 1jce_A ROD shape-determining p 44.6 13 0.00045 29.0 2.7 17 64-80 4-20 (344)
23 3p04_A Uncharacterized BCR; SE 43.2 53 0.0018 22.6 5.3 49 88-136 7-60 (87)
24 3vov_A Glucokinase, hexokinase 41.4 35 0.0012 26.6 4.7 18 64-81 2-19 (302)
25 2ap1_A Putative regulator prot 39.6 46 0.0016 25.8 5.1 18 64-81 25-42 (327)
26 4htl_A Beta-glucoside kinase; 39.1 57 0.002 25.2 5.5 46 63-108 4-53 (297)
27 3ifr_A Carbohydrate kinase, FG 38.4 38 0.0013 28.7 4.7 20 62-81 6-25 (508)
28 4e1j_A Glycerol kinase; struct 37.8 42 0.0014 28.6 4.9 19 63-81 26-44 (520)
29 2aa4_A Mannac kinase, putative 37.2 71 0.0024 24.1 5.7 45 64-108 2-51 (289)
30 1lya_B Cathepsin D; lysosomal 36.9 23 0.00077 26.4 2.8 19 62-80 222-240 (241)
31 2gup_A ROK family protein; sug 36.8 54 0.0019 24.9 5.0 50 64-113 5-61 (292)
32 3epq_A Putative fructokinase; 35.0 97 0.0033 24.2 6.3 44 64-109 4-51 (302)
33 3g25_A Glycerol kinase; IDP007 35.0 51 0.0017 27.7 4.9 19 63-81 6-24 (501)
34 2p3r_A Glycerol kinase; glycer 34.0 54 0.0018 27.8 4.9 18 64-81 4-21 (510)
35 2hoe_A N-acetylglucosamine kin 33.7 71 0.0024 25.6 5.4 21 61-81 85-105 (380)
36 4aa9_A Chymosin; hydrolase, as 33.6 26 0.0009 27.1 2.8 19 62-80 301-319 (320)
37 3h3n_X Glycerol kinase; ATP-bi 33.5 51 0.0017 27.8 4.7 19 63-81 5-23 (506)
38 3hz6_A Xylulokinase; xylulose, 33.2 56 0.0019 27.7 4.9 18 64-81 6-23 (511)
39 3pvk_A Candidapepsin-2; hydrol 32.5 28 0.00096 27.2 2.8 20 62-81 312-331 (342)
40 2dpn_A Glycerol kinase; thermu 32.2 67 0.0023 26.9 5.2 18 64-81 3-20 (495)
41 2d4w_A Glycerol kinase; alpha 32.1 68 0.0023 27.0 5.3 18 64-81 3-20 (504)
42 2w40_A Glycerol kinase, putati 31.7 57 0.002 27.4 4.7 18 64-81 5-22 (503)
43 1z6r_A MLC protein; transcript 31.6 54 0.0018 26.4 4.4 21 61-81 83-103 (406)
44 2qm1_A Glucokinase; alpha-beta 31.1 87 0.003 23.9 5.3 19 63-81 6-24 (326)
45 3ll3_A Gluconate kinase; xylul 30.8 64 0.0022 27.2 4.9 18 63-80 4-21 (504)
46 2gel_A Putative GRAM negative 30.7 1.8E+02 0.0061 22.2 7.9 69 64-132 2-84 (231)
47 4db3_A Glcnac kinase, N-acetyl 30.6 96 0.0033 24.3 5.6 18 64-81 25-42 (327)
48 3r8e_A Hypothetical sugar kina 30.3 64 0.0022 25.2 4.5 21 61-81 17-37 (321)
49 2plg_A TLL0839 protein; hypoth 30.3 1.8E+02 0.0061 22.0 7.1 44 63-106 49-99 (163)
50 1zc6_A Probable N-acetylglucos 30.0 48 0.0017 25.5 3.7 18 64-81 12-29 (305)
51 3psf_A Transcription elongatio 29.7 2.2E+02 0.0074 27.4 8.7 54 63-117 519-589 (1030)
52 3k1w_A Renin; protease, altern 29.6 34 0.0011 26.7 2.8 19 62-80 321-339 (341)
53 3l0q_A Xylulose kinase; xlylul 29.5 73 0.0025 27.2 5.1 18 64-81 6-23 (554)
54 1kcf_A Hypothetical 30.2 KD pr 29.5 28 0.00097 28.0 2.4 20 62-81 39-58 (258)
55 3r6m_A YEAZ, resuscitation pro 29.3 1.2E+02 0.0042 23.3 5.9 45 63-108 2-49 (213)
56 1z05_A Transcriptional regulat 29.2 65 0.0022 26.3 4.5 20 62-81 107-126 (429)
57 3fv3_A SAPP1P-secreted asparti 29.2 34 0.0012 26.7 2.8 20 62-81 310-329 (339)
58 2itm_A Xylulose kinase, xylulo 28.6 76 0.0026 26.4 4.9 17 65-81 2-18 (484)
59 3psg_A Pepsinogen; hydrolase(a 28.6 35 0.0012 27.6 2.8 19 62-80 351-369 (370)
60 3cms_A Chymosin B; hydrolase, 28.5 36 0.0012 26.6 2.8 19 62-80 304-322 (323)
61 1bxo_A Protein (penicillopepsi 28.5 36 0.0012 26.7 2.8 18 62-79 304-321 (323)
62 2zf5_O Glycerol kinase; hypert 28.3 77 0.0027 26.5 4.9 18 64-81 4-21 (497)
63 3h6e_A Carbohydrate kinase, FG 28.2 90 0.0031 26.5 5.4 18 64-81 7-24 (482)
64 1dpj_A Proteinase A; proteinas 27.9 37 0.0013 26.5 2.8 19 62-80 310-328 (329)
65 1j71_A Candidapepsin, aspartic 27.8 37 0.0013 26.6 2.8 18 63-80 306-323 (334)
66 1ibq_A Aspergillopepsin; aspar 27.8 38 0.0013 26.6 2.8 18 62-79 306-323 (325)
67 2ych_A Competence protein PILM 27.7 36 0.0012 26.8 2.7 19 62-80 12-30 (377)
68 2ch5_A NAGK protein; transfera 27.4 78 0.0027 24.5 4.5 19 63-81 6-24 (347)
69 3c9x_A Trichoderma reesei aspa 27.0 40 0.0014 26.5 2.8 18 62-79 311-328 (329)
70 2e2o_A Hexokinase; acetate and 26.9 81 0.0028 24.0 4.5 18 64-81 3-20 (299)
71 3htv_A D-allose kinase, alloki 26.9 45 0.0015 26.2 3.1 20 62-81 6-25 (310)
72 1izd_A Aspartic proteinase; su 26.5 41 0.0014 26.4 2.8 18 62-79 304-321 (323)
73 1yg9_A Aspartic protease BLA G 26.4 41 0.0014 26.5 2.8 19 62-80 310-328 (330)
74 1htr_B Gastricsin; aspartyl pr 26.1 42 0.0014 26.2 2.8 19 62-80 310-328 (329)
75 2qzx_A Candidapepsin-5; aspart 25.7 43 0.0015 26.3 2.8 19 63-81 313-331 (342)
76 1wkr_A Polyporopepsin; hydrola 25.3 45 0.0015 26.2 2.8 19 62-80 314-332 (340)
77 2x0b_A Renin; hydrolase-hormon 24.8 44 0.0015 27.4 2.8 19 62-80 364-382 (383)
78 2apr_A Rhizopuspepsin; hydrola 24.7 46 0.0016 26.0 2.8 19 62-80 305-323 (325)
79 3psi_A Transcription elongatio 24.6 2.9E+02 0.01 27.0 8.7 63 63-129 516-595 (1219)
80 1mpp_A Pepsin; hydrolase(acid 24.6 46 0.0016 26.3 2.8 19 62-80 336-354 (361)
81 1hux_A Activator of (R)-2-hydr 24.6 48 0.0017 25.6 2.8 18 64-81 4-21 (270)
82 3ezw_A Glycerol kinase; glycer 24.5 1.1E+02 0.0039 25.8 5.3 29 63-91 4-38 (526)
83 1oew_A Endothiapepsin; hydrola 24.0 50 0.0017 25.9 2.8 18 62-79 310-328 (329)
84 3vf3_A Beta-secretase 1; struc 23.8 43 0.0015 26.9 2.5 19 62-80 355-373 (402)
85 2jrx_A UPF0352 protein YEJL; h 23.5 46 0.0016 23.2 2.2 25 110-134 35-70 (83)
86 1am5_A Pepsin, acid proteinase 23.1 41 0.0014 26.2 2.1 18 63-80 306-323 (324)
87 2ewy_A Beta-secretase 2; BACE2 23.0 51 0.0018 26.2 2.8 30 62-91 336-367 (383)
88 2l69_A Rossmann 2X3 fold prote 22.7 1.5E+02 0.0052 21.6 5.0 36 96-131 36-76 (134)
89 3lpj_A Beta-secretase 1; alzhe 22.5 52 0.0018 27.2 2.8 19 62-80 401-419 (455)
90 2jpq_A UPF0352 protein VP2129; 21.8 43 0.0015 23.4 1.8 26 110-135 35-71 (83)
91 1tzs_A Cathepsin E; hydrolase, 21.7 44 0.0015 26.5 2.1 18 63-80 324-341 (351)
92 3h1q_A Ethanolamine utilizatio 21.6 80 0.0027 23.4 3.4 21 61-81 26-46 (272)
93 2yhx_A Hexokinase B; transfera 21.0 72 0.0024 27.3 3.4 19 62-80 60-78 (457)
94 2juz_A UPF0352 protein HI0840; 20.4 48 0.0016 23.0 1.8 24 110-133 35-69 (80)
95 2qp8_A Beta-secretase 1; BACE1 20.3 1E+02 0.0034 24.7 4.0 19 62-80 348-366 (395)
No 1
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=99.80 E-value=3.9e-20 Score=132.25 Aligned_cols=70 Identities=20% Similarity=0.105 Sum_probs=62.8
Q ss_pred ceEEEeecCCceEEEEeec--ceeeeeeeeEEccc-hhHHHHHHHHhhcc----EEEC-------CCChhhHHHHHHHHH
Q 032585 63 GFSLGVDLGLSRTGLALSK--GFCVRPLTVLKLRG-EKLELQLLEIAQRE----VILG-------SYEPQLNLLSKKKLR 128 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd--giiAsPL~tI~~~~-~~~~~~L~eli~ee----vVVG-------tEgp~A~kVr~FA~r 128 (137)
+|+||||||+||||||+|| +++|+|++||.+.+ ..+++.|.+++++| |||| +++++++++++|+++
T Consensus 1 mriLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~ 80 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA 80 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHH
T ss_pred CcEEEEEeCCCEEEEEEEeCCCCeeeeeEEEEccCcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHH
Confidence 4799999999999999995 88999999997543 45688999999886 9999 999999999999999
Q ss_pred HHHh
Q 032585 129 WFYY 132 (137)
Q Consensus 129 L~~~ 132 (137)
|++.
T Consensus 81 L~~~ 84 (98)
T 1iv0_A 81 LRAR 84 (98)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 9985
No 2
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=99.77 E-value=5.1e-19 Score=133.08 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=63.6
Q ss_pred ceEEEeecCCceEEEEeec--ceeeeeeeeEEccc-hhHHHHHHHHhhcc----EEEC-------CCChhhHHHHHHHHH
Q 032585 63 GFSLGVDLGLSRTGLALSK--GFCVRPLTVLKLRG-EKLELQLLEIAQRE----VILG-------SYEPQLNLLSKKKLR 128 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd--giiAsPL~tI~~~~-~~~~~~L~eli~ee----vVVG-------tEgp~A~kVr~FA~r 128 (137)
+++||||||+||||||||| +.+|+|++||.+.+ ..+++.|.++++++ |||| +++++++++++|+++
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~~~A~pl~ti~~~~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~ 82 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANR 82 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCEEEEEEEcCCCCEEeeEEEEEcCCcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHH
Confidence 5899999999999999995 78999999998643 34678888888885 9999 999999999999999
Q ss_pred HHHhcC
Q 032585 129 WFYYCD 134 (137)
Q Consensus 129 L~~~~~ 134 (137)
|++.++
T Consensus 83 L~~~~~ 88 (138)
T 1nu0_A 83 IHGRFG 88 (138)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998763
No 3
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=99.59 E-value=3.1e-15 Score=113.14 Aligned_cols=71 Identities=23% Similarity=0.259 Sum_probs=63.2
Q ss_pred ceEEEeecCCceEEEEeec--ceeeeeeeeEEccc---hhHHHHHHHHhhcc----EEEC-------CCChhhHHHHHHH
Q 032585 63 GFSLGVDLGLSRTGLALSK--GFCVRPLTVLKLRG---EKLELQLLEIAQRE----VILG-------SYEPQLNLLSKKK 126 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd--giiAsPL~tI~~~~---~~~~~~L~eli~ee----vVVG-------tEgp~A~kVr~FA 126 (137)
+|+||||+|++|||+||+| +.+++|++||...+ ..+++.|.+++++| |||| ++++++.+++.|+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~~~~~r~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~ 82 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFA 82 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHH
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEEcCCcchHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHH
Confidence 6899999999999999995 88999999998543 34688999999996 9999 8999999999999
Q ss_pred HHHHHhc
Q 032585 127 LRWFYYC 133 (137)
Q Consensus 127 ~rL~~~~ 133 (137)
..|.+.+
T Consensus 83 ~~L~~~~ 89 (150)
T 1vhx_A 83 KVLETTY 89 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998764
No 4
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=96.47 E-value=0.0072 Score=46.43 Aligned_cols=51 Identities=27% Similarity=0.411 Sum_probs=33.7
Q ss_pred ceEEEeecCCceEEEEeec--ce---eeeee--eeEEccc--------hhHHHHHHHHhhcc----EEEC
Q 032585 63 GFSLGVDLGLSRTGLALSK--GF---CVRPL--TVLKLRG--------EKLELQLLEIAQRE----VILG 113 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd--gi---iAsPL--~tI~~~~--------~~~~~~L~eli~ee----vVVG 113 (137)
+||||||.|+.++|.+|-+ +- ..+.+ ++|.... ....+.|.++++++ ++|-
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~~~~~~~~v~~G~I~t~~~~~~~~RL~~I~~~l~~~i~~~~Pd~vaiE 70 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGRIHARVLEVLHRFRPEAVAVE 70 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSSSSSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CEEEEEccccCceEEEEEEecCCccceEEEEEeCeEECCCCCCHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 5899999999999999973 33 23333 6776432 12346666666664 6665
No 5
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=93.73 E-value=0.13 Score=38.84 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=29.2
Q ss_pred ceEEEeecCCceEEEEeec--ceee--eeeeeEEccc-------hhHHHHHHHHhhcc
Q 032585 63 GFSLGVDLGLSRTGLALSK--GFCV--RPLTVLKLRG-------EKLELQLLEIAQRE 109 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd--giiA--sPL~tI~~~~-------~~~~~~L~eli~ee 109 (137)
+|+||||-|+.++|.||-+ +-.. --.++|+... ....+.|.+++.++
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~~~~~v~~G~i~t~~~~~~~Rl~~i~~~l~~~i~~~ 58 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQF 58 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEccCCCCeeEEEEEecCCeEEEEEeeEEECCCCCHHHHHHHHHHHHHHHHHHc
Confidence 5899999999999999983 3211 2223454331 12345566666664
No 6
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=79.10 E-value=5.3 Score=37.17 Aligned_cols=73 Identities=21% Similarity=0.197 Sum_probs=42.0
Q ss_pred ccccceEEEeecCCceEE--EEeec--ceeeeeeeeEEccc----hhHHHHHHHHhhcc----EEECCCChhhHHHHHHH
Q 032585 59 LWRGGFSLGVDLGLSRTG--LALSK--GFCVRPLTVLKLRG----EKLELQLLEIAQRE----VILGSYEPQLNLLSKKK 126 (137)
Q Consensus 59 ~~~~gRiLGlD~GtKRIG--VAVSd--giiAsPL~tI~~~~----~~~~~~L~eli~ee----vVVGtEgp~A~kVr~FA 126 (137)
-+.+.++||+|.|- |+| +|+-| |-.---..+.+... ....+.|.+++.++ |+||. |-.+...++|+
T Consensus 325 P~~~~~vlg~dpg~-r~g~k~a~vd~~G~~l~~~~iy~~~~~~~~~~~~~~l~~li~~~~~~~IaIGn-gtasret~~~v 402 (785)
T 3bzc_A 325 PAGPRATLGLDPGL-RTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIGN-GTASRETDKLA 402 (785)
T ss_dssp CCCSCCEEEEECCS-SSCEEEEEECTTSCEEEEEEECCSGGGCCHHHHHHHHHHHHHHHTCCEEEEES-STTHHHHHHHH
T ss_pred CCCCCeEEEECCCC-cCceEEEEECCCCCEEEEEEEecCCchhHHHHHHHHHHHHHHHcCCCEEEECC-CccCHHHHHHH
Confidence 46677999999995 555 45543 32221111111111 23467888888875 99993 22345556777
Q ss_pred HHHHHhc
Q 032585 127 LRWFYYC 133 (137)
Q Consensus 127 ~rL~~~~ 133 (137)
..|-+..
T Consensus 403 ~~l~~~~ 409 (785)
T 3bzc_A 403 GELIKKY 409 (785)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 7765543
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=75.70 E-value=1.7 Score=35.10 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=16.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
.+.++||||||..++||+.
T Consensus 12 ~~~vvGIDlGTt~s~va~~ 30 (409)
T 4gni_A 12 ERVVIGITFGNSNSSIAHT 30 (409)
T ss_dssp -CCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEcCCCeEEEEEE
Confidence 3579999999999999996
No 8
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=75.02 E-value=1.4 Score=35.08 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=15.8
Q ss_pred eEEEeecCCceEEEEee
Q 032585 64 FSLGVDLGLSRTGLALS 80 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS 80 (137)
.++||||||..+.||+.
T Consensus 3 ~~vGIDlGTt~s~va~~ 19 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIM 19 (383)
T ss_dssp CCCEEECCSSEEEEEEE
T ss_pred cEEEEEcCCCCEEEEEE
Confidence 57999999999999998
No 9
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=73.89 E-value=1.8 Score=34.76 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=16.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
.+.++||||||..++||+.
T Consensus 22 ~~~viGID~GTt~s~va~~ 40 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVF 40 (404)
T ss_dssp -CCCEEEEECSSEEEEEEE
T ss_pred cCCEEEEEcCCccEEEEEE
Confidence 4569999999999999997
No 10
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=73.89 E-value=1.9 Score=34.26 Aligned_cols=19 Identities=32% Similarity=0.522 Sum_probs=17.2
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
.+.++||||||..++||+.
T Consensus 17 ~~~viGID~GTt~s~va~~ 35 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVM 35 (394)
T ss_dssp CCSCEEEEECSSEEEEEEE
T ss_pred CCCEEEEEeCcCcEEEEEE
Confidence 3678999999999999988
No 11
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=66.35 E-value=3.4 Score=36.16 Aligned_cols=18 Identities=33% Similarity=0.647 Sum_probs=16.5
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
+.++||||||..++||+.
T Consensus 2 ~~viGIDlGTT~S~Va~~ 19 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIM 19 (605)
T ss_dssp CCEEEEECCSSEEEEEEE
T ss_pred CcEEEEEcCCCcEEEEEE
Confidence 468999999999999997
No 12
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=62.14 E-value=4.3 Score=35.01 Aligned_cols=18 Identities=28% Similarity=0.554 Sum_probs=16.6
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
+.++||||||..++||+.
T Consensus 4 ~~~iGIDlGTt~s~va~~ 21 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVF 21 (554)
T ss_dssp CCCEEEEECSSEEEEEEE
T ss_pred CCEEEEEeCcccEEEEEE
Confidence 468999999999999998
No 13
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=61.74 E-value=6 Score=25.63 Aligned_cols=19 Identities=21% Similarity=0.197 Sum_probs=15.6
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..+.-+|++..|||+|-.
T Consensus 68 ~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 68 RPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEEc
Confidence 3467789999999999953
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=60.86 E-value=4.4 Score=35.44 Aligned_cols=17 Identities=29% Similarity=0.556 Sum_probs=15.4
Q ss_pred eEEEeecCCceEEEEee
Q 032585 64 FSLGVDLGLSRTGLALS 80 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS 80 (137)
.++||||||..++||+.
T Consensus 3 ~viGIDlGTt~s~va~~ 19 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIM 19 (605)
T ss_dssp -CEEEECCSSEEEEEEE
T ss_pred CEEEEEcCCcCEEEEEE
Confidence 58999999999999998
No 15
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=59.52 E-value=5.6 Score=33.72 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=15.9
Q ss_pred eEEEeecCCceEEEEee
Q 032585 64 FSLGVDLGLSRTGLALS 80 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS 80 (137)
.++||||||..+.||+.
T Consensus 3 ~~iGIDlGTt~s~va~~ 19 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVL 19 (509)
T ss_dssp CEEEEEECSSEEEEEEE
T ss_pred CEEEEEcCCceEEEEEE
Confidence 58999999999999998
No 16
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=50.25 E-value=71 Score=25.36 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=36.4
Q ss_pred eEEEeecCCceEEEEeecc--eee-eeeeeEEccchhHHHHHHHHhhc---------cEEECCCChhhHHHHHHHHHHHH
Q 032585 64 FSLGVDLGLSRTGLALSKG--FCV-RPLTVLKLRGEKLELQLLEIAQR---------EVILGSYEPQLNLLSKKKLRWFY 131 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSdg--iiA-sPL~tI~~~~~~~~~~L~eli~e---------evVVGtEgp~A~kVr~FA~rL~~ 131 (137)
-+|+||.|-.+|=+|+-++ +.. .-+.|-....+.....|.++... .++|++..|.. ...+.+.+++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~~~~~I~~iiISSVvp~~--~~~l~~~~~~ 80 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVVPQV--DYSLRSACVK 80 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESCHHH--HHHHHHHHHH
T ss_pred eEEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCCChhhceEEEEecchHhH--HHHHHHHHHH
Confidence 4899999999999999842 222 11111111122334455555543 17777777653 3334444444
Q ss_pred hc
Q 032585 132 YC 133 (137)
Q Consensus 132 ~~ 133 (137)
.+
T Consensus 81 ~~ 82 (266)
T 3djc_A 81 YF 82 (266)
T ss_dssp HT
T ss_pred Hc
Confidence 33
No 17
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=48.93 E-value=27 Score=27.35 Aligned_cols=18 Identities=22% Similarity=0.569 Sum_probs=16.5
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|...|=+++.|
T Consensus 3 ~~lgiDiGgt~i~~~l~d 20 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVD 20 (321)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEC
Confidence 689999999999999994
No 18
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=48.09 E-value=11 Score=28.67 Aligned_cols=18 Identities=17% Similarity=0.445 Sum_probs=15.9
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
+.+||||+|+.-+=+||-
T Consensus 1 M~~lGID~GsT~tk~av~ 18 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVIL 18 (276)
T ss_dssp CEEEEEEECSSCEEEEEE
T ss_pred CeEEEEEcCccEEEEEEE
Confidence 468999999999998887
No 19
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=46.93 E-value=9.9 Score=33.98 Aligned_cols=17 Identities=35% Similarity=0.581 Sum_probs=15.7
Q ss_pred eEEEeecCCceEEEEee
Q 032585 64 FSLGVDLGLSRTGLALS 80 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS 80 (137)
.++||||||..+.||+.
T Consensus 3 ~~iGIDlGTtns~va~~ 19 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVA 19 (675)
T ss_dssp CCEEEECCSSEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEE
Confidence 48999999999999997
No 20
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=46.67 E-value=30 Score=27.16 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=17.4
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
.+.++|||+|...|=+++.|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d 48 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVS 48 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEEC
Confidence 45789999999999999984
No 21
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=45.59 E-value=11 Score=30.63 Aligned_cols=29 Identities=31% Similarity=0.282 Sum_probs=8.1
Q ss_pred EEEeecCCceEEEEee-cceeeeeeeeEEc
Q 032585 65 SLGVDLGLSRTGLALS-KGFCVRPLTVLKL 93 (137)
Q Consensus 65 iLGlD~GtKRIGVAVS-dgiiAsPL~tI~~ 93 (137)
.-|+|+|+-......- .|+++-.+|-++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~Gv~~a~vTPf~~ 37 (314)
T 3qze_A 8 SSGVDLGTENLYFQSMIAGSMVALVTPFDA 37 (314)
T ss_dssp ---------------CCCEEEEECCCCBCT
T ss_pred ccccccccccccccccCCeeEEeeECCCCC
Confidence 4589999988777765 5777755555543
No 22
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=44.63 E-value=13 Score=29.00 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=15.1
Q ss_pred eEEEeecCCceEEEEee
Q 032585 64 FSLGVDLGLSRTGLALS 80 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS 80 (137)
..+|||+|+..+-+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR 20 (344)
T ss_dssp CEEEEEECSSEEEEEET
T ss_pred ceEEEEcCcCcEEEEEC
Confidence 58999999999998875
No 23
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=43.18 E-value=53 Score=22.56 Aligned_cols=49 Identities=6% Similarity=-0.002 Sum_probs=38.1
Q ss_pred eeeEEccchhHHHHHHHHhhcc--EEEC---CCChhhHHHHHHHHHHHHhcCCC
Q 032585 88 LTVLKLRGEKLELQLLEIAQRE--VILG---SYEPQLNLLSKKKLRWFYYCDGG 136 (137)
Q Consensus 88 L~tI~~~~~~~~~~L~eli~ee--vVVG---tEgp~A~kVr~FA~rL~~~~~~~ 136 (137)
+.+++-+.-.+...+.+.+++. |||= -+.+.|+++-+|+.-+.-++.|.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~~VvvNL~~ld~~~AqRivDF~sG~~yal~G~ 60 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCFALHGK 60 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEecCcHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHhccceEEeccE
Confidence 3455545556778888888885 7776 88889999999999988888774
No 24
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=41.43 E-value=35 Score=26.59 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=16.5
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|+|+|...|-+++.|
T Consensus 2 ~~lgiDiGgt~i~~~l~d 19 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFD 19 (302)
T ss_dssp CEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEcCCEEEEEEEe
Confidence 589999999999999995
No 25
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=39.60 E-value=46 Score=25.78 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=16.2
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|...|=+++.|
T Consensus 25 ~~lgiDiGgt~i~~~l~d 42 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFD 42 (327)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEECCCEEEEEEEe
Confidence 589999999999999984
No 26
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=39.09 E-value=57 Score=25.22 Aligned_cols=46 Identities=4% Similarity=-0.000 Sum_probs=27.5
Q ss_pred ceEEEeecCCceEEEEeec---ceeeeeeeeEEccc-hhHHHHHHHHhhc
Q 032585 63 GFSLGVDLGLSRTGLALSK---GFCVRPLTVLKLRG-EKLELQLLEIAQR 108 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd---giiAsPL~tI~~~~-~~~~~~L~eli~e 108 (137)
+.++|+|+|...|=+++.| .++++--..+...+ +..++.+.+++.+
T Consensus 4 m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~~~~ 53 (297)
T 4htl_A 4 MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAE 53 (297)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEECSTTCHHHHHHHHHHHHHT
T ss_pred cEEEEEEeCCCeEEEEEECCCCCEEEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 3689999999999999984 34442111111112 3345666666654
No 27
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=38.37 E-value=38 Score=28.71 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=16.2
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
..-++|||+|+..|=+++-|
T Consensus 6 ~~~~lgIDiGtts~k~~l~d 25 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVR 25 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEecCcceEEEEEC
Confidence 35789999999998888873
No 28
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=37.82 E-value=42 Score=28.55 Aligned_cols=19 Identities=26% Similarity=0.461 Sum_probs=16.5
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
..++|||+|+..|=+++-|
T Consensus 26 ~~~lgIDiGtts~k~~l~d 44 (520)
T 4e1j_A 26 GYILAIDQGTTSTRAIVFD 44 (520)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred CeEEEEEeCCcceEEEEEC
Confidence 4799999999999888873
No 29
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=37.22 E-value=71 Score=24.11 Aligned_cols=45 Identities=20% Similarity=0.146 Sum_probs=26.6
Q ss_pred eEEEeecCCceEEEEeec---ceeeeeeeeEEc-c-chhHHHHHHHHhhc
Q 032585 64 FSLGVDLGLSRTGLALSK---GFCVRPLTVLKL-R-GEKLELQLLEIAQR 108 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd---giiAsPL~tI~~-~-~~~~~~~L~eli~e 108 (137)
.++|||+|...|=+++.| .++++--..... . .+..++.|.+.+++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~~~~~~~~~~~~~i~~~i~~ 51 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSP 51 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 479999999999999984 333321111111 1 13345666666655
No 30
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=36.90 E-value=23 Score=26.40 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=15.9
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 222 ~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 222 GRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEECCCCEEEEEEc
Confidence 4568889999999999953
No 31
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=36.76 E-value=54 Score=24.87 Aligned_cols=50 Identities=12% Similarity=-0.006 Sum_probs=29.6
Q ss_pred eEEEeecCCceEEEEeec---ceeeeeeeeEEccchhHHHHHHHHhhcc----EEEC
Q 032585 64 FSLGVDLGLSRTGLALSK---GFCVRPLTVLKLRGEKLELQLLEIAQRE----VILG 113 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd---giiAsPL~tI~~~~~~~~~~L~eli~ee----vVVG 113 (137)
.++|||+|...|=+++.| .++++--...+...+...+.|.+++++. |.||
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~il~~~~~~~~~~~~~~~~~i~~~i~~~~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGKILDKTSISTPENLEDLLAWLDQRLSEQDYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCCEEEEEEECCCSSHHHHHHHHHHHHTTSCCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEeCCCCHHHHHHHHHHHHHhCCCcEEEEE
Confidence 489999999999999984 2333210000111234466777777643 5555
No 32
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=35.04 E-value=97 Score=24.25 Aligned_cols=44 Identities=9% Similarity=0.022 Sum_probs=28.4
Q ss_pred eEEEeecCCceEEEEeec---ceeeeeeeeEEccc-hhHHHHHHHHhhcc
Q 032585 64 FSLGVDLGLSRTGLALSK---GFCVRPLTVLKLRG-EKLELQLLEIAQRE 109 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd---giiAsPL~tI~~~~-~~~~~~L~eli~ee 109 (137)
.++|||+|...|=+|+.| .++.+ ..++..+ +..++.+.+.+.+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~il~~--~~~~t~~~~~~l~~i~~~~~~~ 51 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGTIIDR--IEFPTXMPDETIEXVIQYFSQF 51 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEE--EEEECCCHHHHHHHHHHHHTTS
T ss_pred EEEEEEECcceeEEEEEECCCcEEEE--EEecCCChHHHHHHHHHHhccC
Confidence 589999999999999984 33332 1222222 34566777777653
No 33
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=35.04 E-value=51 Score=27.74 Aligned_cols=19 Identities=21% Similarity=0.351 Sum_probs=16.3
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
.-++|||+|+..+=+++-|
T Consensus 6 ~~~lgIDiGtts~k~~l~d 24 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFN 24 (501)
T ss_dssp CEEEEEEECSSEEEEEEEC
T ss_pred cEEEEEEeCccceEEEEEc
Confidence 3689999999999888873
No 34
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=33.96 E-value=54 Score=27.78 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=15.8
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-++|||+|+..+=+++-|
T Consensus 4 ~~lgIDiGtts~k~~l~d 21 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMD 21 (510)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEcCCcceEEEEEC
Confidence 589999999999888873
No 35
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=33.68 E-value=71 Score=25.62 Aligned_cols=21 Identities=14% Similarity=0.328 Sum_probs=18.4
Q ss_pred ccceEEEeecCCceEEEEeec
Q 032585 61 RGGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 61 ~~gRiLGlD~GtKRIGVAVSd 81 (137)
..+.++|||+|...|=+++.|
T Consensus 85 ~~~~~lGIDiGgt~i~~~l~d 105 (380)
T 2hoe_A 85 NCAYVLGIEVTRDEIAACLID 105 (380)
T ss_dssp GGCEEEEEEECSSEEEEEEEE
T ss_pred CCCeEEEEEECCCEEEEEEEC
Confidence 357899999999999999984
No 36
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=33.57 E-value=26 Score=27.11 Aligned_cols=19 Identities=26% Similarity=0.242 Sum_probs=15.9
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 301 ~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 301 REYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEECCCCEEEEEec
Confidence 4567789999999999953
No 37
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=33.49 E-value=51 Score=27.83 Aligned_cols=19 Identities=11% Similarity=0.345 Sum_probs=16.0
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
.-++|||+|+..+=+++-|
T Consensus 5 ~~~lgIDiGtts~k~~l~d 23 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFD 23 (506)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred CEEEEEEcCCCceEEEEEC
Confidence 3689999999998888873
No 38
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=33.20 E-value=56 Score=27.67 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=15.9
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-++|||+|+..+=+++-|
T Consensus 6 ~~lgIDiGtts~k~~l~d 23 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALAD 23 (511)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEC
Confidence 689999999999888873
No 39
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=32.45 E-value=28 Score=27.15 Aligned_cols=20 Identities=25% Similarity=0.111 Sum_probs=16.9
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
+..++.+|++.+|||+|-..
T Consensus 312 ~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 312 RSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp TTEEEEEETTTTEEEEEEBC
T ss_pred hcEEEEEECCCCEEEEEecC
Confidence 45677799999999999873
No 40
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=32.18 E-value=67 Score=26.87 Aligned_cols=18 Identities=28% Similarity=0.385 Sum_probs=15.7
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|+..|=+++-|
T Consensus 3 ~~lgiDiGtT~~k~~l~d 20 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFT 20 (495)
T ss_dssp CEEEEEECSSEEEEEEEC
T ss_pred EEEEEeeCCcceEEEEEC
Confidence 489999999999888873
No 41
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=32.07 E-value=68 Score=26.97 Aligned_cols=18 Identities=17% Similarity=0.361 Sum_probs=16.0
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-++|||+|+..|=+++-|
T Consensus 3 ~~lgiDiGtts~k~~l~d 20 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFD 20 (504)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEecCCcceEEEEEC
Confidence 589999999999998884
No 42
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=31.73 E-value=57 Score=27.38 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=15.8
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|+..|=+++-|
T Consensus 5 ~~lgIDiGtT~~k~~l~d 22 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYD 22 (503)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeCCcceEEEEEC
Confidence 589999999999888873
No 43
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=31.59 E-value=54 Score=26.39 Aligned_cols=21 Identities=19% Similarity=0.121 Sum_probs=18.4
Q ss_pred ccceEEEeecCCceEEEEeec
Q 032585 61 RGGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 61 ~~gRiLGlD~GtKRIGVAVSd 81 (137)
..+.++|||+|...|=+++.|
T Consensus 83 ~~~~~lgiDiG~t~i~~~l~d 103 (406)
T 1z6r_A 83 EAWHYLSLRISRGEIFLALRD 103 (406)
T ss_dssp TTCEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEEEEcCCEEEEEEEc
Confidence 357899999999999999984
No 44
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=31.15 E-value=87 Score=23.92 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=17.0
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
+.++|||+|...|=+++.|
T Consensus 6 ~~~lgiDiggt~~~~~l~d 24 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILT 24 (326)
T ss_dssp CEEEEEEECSSEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEEC
Confidence 4789999999999999984
No 45
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=30.79 E-value=64 Score=27.24 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=15.5
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
.-++|||+|+..|=+++-
T Consensus 4 ~~~lgIDiGtts~K~~l~ 21 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLY 21 (504)
T ss_dssp EEEEEEEECSSEEEEEEE
T ss_pred CEEEEEEecCCceEEEEE
Confidence 368999999999888877
No 46
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=30.67 E-value=1.8e+02 Score=22.19 Aligned_cols=69 Identities=12% Similarity=-0.001 Sum_probs=39.2
Q ss_pred eEEEeecCCceEEEEee-cc-eeeeeeeeEEccchhHHHHHHHHhhc---------cEEEC-CCChhh--HHHHHHHHHH
Q 032585 64 FSLGVDLGLSRTGLALS-KG-FCVRPLTVLKLRGEKLELQLLEIAQR---------EVILG-SYEPQL--NLLSKKKLRW 129 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVS-dg-iiAsPL~tI~~~~~~~~~~L~eli~e---------evVVG-tEgp~A--~kVr~FA~rL 129 (137)
.+||||==+..++||+. ++ +.++....-..+.+.+...|.+++++ .|+|+ ..|.-+ +..-.+|+.|
T Consensus 2 ~iL~idTs~~~~sval~~~~~~~~~~~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRig~~~ak~l 81 (231)
T 2gel_A 2 RILAIDTATEACSVALWNNGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGL 81 (231)
T ss_dssp EEEEEECSSSEEEEEEEETTEEEEEEEECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCCcCeEEEEEECCEEEEEEhhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHHHHHHHHHH
Confidence 58999999999999998 44 33332211112223444555555554 27777 333332 2223677766
Q ss_pred HHh
Q 032585 130 FYY 132 (137)
Q Consensus 130 ~~~ 132 (137)
...
T Consensus 82 a~~ 84 (231)
T 2gel_A 82 ALG 84 (231)
T ss_dssp HHT
T ss_pred HHH
Confidence 644
No 47
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=30.58 E-value=96 Score=24.32 Aligned_cols=18 Identities=17% Similarity=0.320 Sum_probs=16.3
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|+|+|...|=+++.|
T Consensus 25 ~~lgiDiGgt~i~~~l~d 42 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFN 42 (327)
T ss_dssp CEEEEEECSSEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEEe
Confidence 589999999999999984
No 48
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=30.33 E-value=64 Score=25.17 Aligned_cols=21 Identities=29% Similarity=0.483 Sum_probs=17.6
Q ss_pred ccceEEEeecCCceEEEEeec
Q 032585 61 RGGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 61 ~~gRiLGlD~GtKRIGVAVSd 81 (137)
..+.++|||+|...|=+++.|
T Consensus 17 ~~~~~lgidiggt~i~~~l~d 37 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVT 37 (321)
T ss_dssp --CCEEEEECCSSEEEEEEEC
T ss_pred cCcEEEEEEECCCEEEEEEEc
Confidence 467899999999999999994
No 49
>2plg_A TLL0839 protein; hypothetical, uncharacterized, DUF1821, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 2.60A {Synechococcus elongatus} SCOP: d.198.1.2
Probab=30.29 E-value=1.8e+02 Score=22.04 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=30.6
Q ss_pred ceEEEeecCCceEEEEee----cceee--eeeeeEEccc-hhHHHHHHHHh
Q 032585 63 GFSLGVDLGLSRTGLALS----KGFCV--RPLTVLKLRG-EKLELQLLEIA 106 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS----dgiiA--sPL~tI~~~~-~~~~~~L~eli 106 (137)
+..--|++|+.++.|.++ +.++. +|+..++..+ .+..++|.+.=
T Consensus 49 ~~~W~~~~GSveV~V~l~g~~d~~~L~V~SPV~~lP~~~~~~l~~~LLE~N 99 (163)
T 2plg_A 49 GKIWMFRYGSAEVFVQLSGHTEEDFLTIWSPVLPLPVADELALYRKLLTLN 99 (163)
T ss_dssp EEEEEEEETTEEEEEEECCSSTTCEEEEEEEEEESCCTTHHHHHHHHHHHT
T ss_pred CCceEEEECCEEEEEEecCCCCCCEEEEEEEeccCchhhHHHHHHHHHHhc
Confidence 456679999999999998 24443 9998887544 34455555543
No 50
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=30.02 E-value=48 Score=25.54 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=16.1
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|...|=+++.|
T Consensus 12 ~~lGiDiGgT~i~~~l~d 29 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHA 29 (305)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred EEEEEEcCccceEEEEEc
Confidence 689999999999999883
No 51
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=29.75 E-value=2.2e+02 Score=27.39 Aligned_cols=54 Identities=20% Similarity=0.166 Sum_probs=30.6
Q ss_pred ceEEEeecCCc---eEEE--Eeec--ceeeeeeeeE-----Ecc-chhHHHHHHHHhhcc----EEECCCCh
Q 032585 63 GFSLGVDLGLS---RTGL--ALSK--GFCVRPLTVL-----KLR-GEKLELQLLEIAQRE----VILGSYEP 117 (137)
Q Consensus 63 gRiLGlD~GtK---RIGV--AVSd--giiAsPL~tI-----~~~-~~~~~~~L~eli~ee----vVVGtEgp 117 (137)
.|+||||+|.. |+|+ |+-| |-.-- ..+| +.. .....+.|.+++.++ |+||..+.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~-~~~i~~~~~~~~~~~~~~~~l~~li~~~~~~~IaIGn~s~ 589 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIR-DYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGINGPNP 589 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEE-EEEECSCTTCSSCCHHHHHHHHHHHHHHCCSEEEECCSST
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEE-EEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEECCCCH
Confidence 48999999975 3343 4443 32221 1222 111 123457788888775 99995433
No 52
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=29.62 E-value=34 Score=26.69 Aligned_cols=19 Identities=32% Similarity=0.363 Sum_probs=16.1
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 321 ~~~y~vfD~~~~~igfA~a 339 (341)
T 3k1w_A 321 RKFYTEFDRRNNRIGFALA 339 (341)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEeCCCCEEEEEEC
Confidence 4567889999999999964
No 53
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=29.52 E-value=73 Score=27.21 Aligned_cols=18 Identities=22% Similarity=0.473 Sum_probs=15.6
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-+||||+|+..+=+++-|
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFD 23 (554)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEECcccEEEEEEC
Confidence 689999999998888873
No 54
>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} SCOP: a.140.2.1 c.55.3.7
Probab=29.48 E-value=28 Score=28.03 Aligned_cols=20 Identities=25% Similarity=0.488 Sum_probs=17.8
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
+.+||+||+|.+....|.-+
T Consensus 39 ~~sIlSID~GikNlAyc~l~ 58 (258)
T 1kcf_A 39 TSRVLGIDLGIKNFSYCFAS 58 (258)
T ss_dssp CSSEEEEEECSTTEEEEEEE
T ss_pred CCcEEEEecCCCceEEEEEc
Confidence 34999999999999999885
No 55
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=29.35 E-value=1.2e+02 Score=23.29 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=28.8
Q ss_pred ceEEEeecCCceEEEEee-c-ceeeeeeeeEEc-cchhHHHHHHHHhhc
Q 032585 63 GFSLGVDLGLSRTGLALS-K-GFCVRPLTVLKL-RGEKLELQLLEIAQR 108 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS-d-giiAsPL~tI~~-~~~~~~~~L~eli~e 108 (137)
+.+||||=-+..++||+. + .+++. .+.-.+ +.+.+...|.++.++
T Consensus 2 M~iLaIdTS~~~~svAl~~~~~~~~~-~~~~~~~Hs~~L~p~i~~~L~~ 49 (213)
T 3r6m_A 2 AKILAIDTATENCSVALLVNDQVISR-SEVAPRDHTKKVLPMVDEVLKE 49 (213)
T ss_dssp CCEEEEECSSSEEEEEEESSSCEEEE-EEECCSCCHHHHHHHHHHHHHT
T ss_pred CEEEEEEccCcceEEEEEECCEEEEE-EEechHHHHHHHHHHHHHHHHH
Confidence 579999999999999998 3 44443 222111 224455566666665
No 56
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=29.22 E-value=65 Score=26.31 Aligned_cols=20 Identities=30% Similarity=0.297 Sum_probs=17.9
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
.+.++|||+|...|=+++.|
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d 126 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHE 126 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEEC
Confidence 56899999999999999984
No 57
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=29.17 E-value=34 Score=26.67 Aligned_cols=20 Identities=20% Similarity=0.057 Sum_probs=16.7
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
+..++.+|++.+|||+|-..
T Consensus 310 ~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 310 RHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp TTEEEEEETTTTEEEEEEBC
T ss_pred hCEEEEEECCCCEEEEEecC
Confidence 45677799999999999873
No 58
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=28.65 E-value=76 Score=26.39 Aligned_cols=17 Identities=35% Similarity=0.558 Sum_probs=14.9
Q ss_pred EEEeecCCceEEEEeec
Q 032585 65 SLGVDLGLSRTGLALSK 81 (137)
Q Consensus 65 iLGlD~GtKRIGVAVSd 81 (137)
++|||+|+..|=+++-|
T Consensus 2 ~lgiDiGtt~~k~~l~d 18 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLN 18 (484)
T ss_dssp EEEEEECSSEEEEEEEC
T ss_pred EEEEEecCcccEEEEEC
Confidence 68999999999888874
No 59
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=28.55 E-value=35 Score=27.61 Aligned_cols=19 Identities=21% Similarity=0.177 Sum_probs=15.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 351 ~~~y~vfD~~~~riGfA~a 369 (370)
T 3psg_A 351 RQYYTVFDRANNKVGLAPV 369 (370)
T ss_dssp TTEEEEEETTTTEEEEEEB
T ss_pred cceEEEEECCCCEEEEEEc
Confidence 4567789999999999953
No 60
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=28.54 E-value=36 Score=26.59 Aligned_cols=19 Identities=21% Similarity=0.121 Sum_probs=15.8
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 304 ~~~y~vfD~~~~~igfA~~ 322 (323)
T 3cms_A 304 REYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred hceEEEEECCCCEEEEEEC
Confidence 4567889999999999953
No 61
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=28.51 E-value=36 Score=26.66 Aligned_cols=18 Identities=17% Similarity=0.021 Sum_probs=15.3
Q ss_pred cceEEEeecCCceEEEEe
Q 032585 62 GGFSLGVDLGLSRTGLAL 79 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAV 79 (137)
+..++.+|++.+|||+|-
T Consensus 304 ~~~y~vfD~~~~riGfA~ 321 (323)
T 1bxo_A 304 KSQYVVFDSDGPQLGFAP 321 (323)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred cCEEEEEECCCCEEEEec
Confidence 446778999999999995
No 62
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=28.26 E-value=77 Score=26.51 Aligned_cols=18 Identities=22% Similarity=0.350 Sum_probs=15.6
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|+.-|=+++-|
T Consensus 4 ~~lgiDiGtt~~k~~l~d 21 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFD 21 (497)
T ss_dssp EEEEEEECSSEEEEEEEC
T ss_pred EEEEEecCCchhEEEEEC
Confidence 589999999999888873
No 63
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=28.16 E-value=90 Score=26.51 Aligned_cols=18 Identities=22% Similarity=0.349 Sum_probs=15.0
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-++|||+|+..+=+++-|
T Consensus 7 ~~lgIDiGTts~Ka~l~d 24 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWD 24 (482)
T ss_dssp -CEEEEECSSEEEEEEEC
T ss_pred eEEEEEcCCCCeEEEEEE
Confidence 689999999998888873
No 64
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=27.93 E-value=37 Score=26.49 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=15.9
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 310 ~~~y~vfD~~~~~igfA~~ 328 (329)
T 1dpj_A 310 RKYYSIYDLGNNAVGLAKA 328 (329)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEECCCCEEEEEEC
Confidence 4578889999999999953
No 65
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=27.82 E-value=37 Score=26.62 Aligned_cols=18 Identities=22% Similarity=0.030 Sum_probs=16.1
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
..++.+|++.+|||+|-.
T Consensus 306 ~~y~vfD~~~~~igfA~~ 323 (334)
T 1j71_A 306 RAYIVYDLDDKTISLAQV 323 (334)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCCEEEEEec
Confidence 467889999999999987
No 66
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=27.77 E-value=38 Score=26.57 Aligned_cols=18 Identities=11% Similarity=0.001 Sum_probs=15.3
Q ss_pred cceEEEeecCCceEEEEe
Q 032585 62 GGFSLGVDLGLSRTGLAL 79 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAV 79 (137)
+..++.+|++.+|||+|-
T Consensus 306 ~~~y~vfD~~~~~igfA~ 323 (325)
T 1ibq_A 306 KSQYVVFNSEGPKLGFAA 323 (325)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred cCEEEEEECCCCEEEeee
Confidence 456778999999999995
No 67
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=27.75 E-value=36 Score=26.77 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=16.4
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
...++|||+|+..|=+++.
T Consensus 12 ~~~~vgiDiGt~~i~~~~~ 30 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEV 30 (377)
T ss_dssp CCCCEEEEECSSEEEEEEE
T ss_pred CCceEEEEeCCCeEEEEEE
Confidence 3458999999999999987
No 68
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=27.44 E-value=78 Score=24.49 Aligned_cols=19 Identities=26% Similarity=0.288 Sum_probs=16.6
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
+.++|||+|...|=+++.|
T Consensus 6 ~~~lgiDiGgt~~~~~l~d 24 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVS 24 (347)
T ss_dssp CEEEEEEECTTCEEEEEEE
T ss_pred eEEEEEEcCccceEEEEEe
Confidence 3689999999999999984
No 69
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=27.00 E-value=40 Score=26.49 Aligned_cols=18 Identities=33% Similarity=0.302 Sum_probs=15.1
Q ss_pred cceEEEeecCCceEEEEe
Q 032585 62 GGFSLGVDLGLSRTGLAL 79 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAV 79 (137)
+..++.+|++.+|||+|-
T Consensus 311 ~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 311 KAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred ccEEEEEECCCCEEeEec
Confidence 346788999999999983
No 70
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=26.87 E-value=81 Score=23.98 Aligned_cols=18 Identities=28% Similarity=0.346 Sum_probs=16.1
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
.++|||+|...|=+++.|
T Consensus 3 ~~lgiDiGgt~~~~~l~d 20 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYD 20 (299)
T ss_dssp CEEEEEECSSCEEEEEEC
T ss_pred EEEEEEeCCCcEEEEEEc
Confidence 589999999999999984
No 71
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=26.86 E-value=45 Score=26.19 Aligned_cols=20 Identities=25% Similarity=0.446 Sum_probs=17.7
Q ss_pred cceEEEeecCCceEEEEeec
Q 032585 62 GGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd 81 (137)
.+.++|||+|...|=+++.|
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d 25 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRT 25 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEEC
Confidence 46799999999999999984
No 72
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=26.46 E-value=41 Score=26.39 Aligned_cols=18 Identities=22% Similarity=0.123 Sum_probs=15.4
Q ss_pred cceEEEeecCCceEEEEe
Q 032585 62 GGFSLGVDLGLSRTGLAL 79 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAV 79 (137)
+..++.+|++.+|||+|-
T Consensus 304 ~~~y~vfD~~~~riGfA~ 321 (323)
T 1izd_A 304 KSQYVVFDASGPRLGFAA 321 (323)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred cCEEEEEECCCCEEEEee
Confidence 456788999999999995
No 73
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=26.38 E-value=41 Score=26.47 Aligned_cols=19 Identities=11% Similarity=0.093 Sum_probs=15.9
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 310 ~~~y~vfD~~~~riGfA~~ 328 (330)
T 1yg9_A 310 DHYYSEFNWENKTMGFGRS 328 (330)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred hheEEEEECCCCEEEEEEC
Confidence 4467789999999999964
No 74
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=26.10 E-value=42 Score=26.19 Aligned_cols=19 Identities=32% Similarity=0.436 Sum_probs=15.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 310 ~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 310 RSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEeC
Confidence 4467889999999999953
No 75
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.72 E-value=43 Score=26.29 Aligned_cols=19 Identities=16% Similarity=0.065 Sum_probs=16.4
Q ss_pred ceEEEeecCCceEEEEeec
Q 032585 63 GFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd 81 (137)
..++.+|++..|||+|-..
T Consensus 313 ~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 313 SAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TEEEEEETTTTEEEEEEBC
T ss_pred cEEEEEECCCCEEEEEeeC
Confidence 4678899999999999873
No 76
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=25.27 E-value=45 Score=26.18 Aligned_cols=19 Identities=32% Similarity=0.226 Sum_probs=16.3
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 314 ~~~y~vfD~~~~~igfA~~ 332 (340)
T 1wkr_A 314 ERFYSVYDTTNKRLGLATT 332 (340)
T ss_dssp TSEEEEEETTTTEEEEEEC
T ss_pred hheEEEEeCCCCeEEEEec
Confidence 3467889999999999976
No 77
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=24.75 E-value=44 Score=27.36 Aligned_cols=19 Identities=32% Similarity=0.363 Sum_probs=15.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++..|||+|-+
T Consensus 364 ~~~y~vfD~~~~rIGfA~a 382 (383)
T 2x0b_A 364 RKFYTEFDRRNNRIGFALA 382 (383)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cceEEEEECCCCEEeEEEc
Confidence 4467789999999999953
No 78
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=24.73 E-value=46 Score=26.04 Aligned_cols=19 Identities=11% Similarity=0.066 Sum_probs=15.8
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 305 ~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 305 KNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp TTEEEEEETTTTEEEEEEB
T ss_pred cceEEEEECCCCEEEEEec
Confidence 3467789999999999954
No 79
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=24.63 E-value=2.9e+02 Score=27.02 Aligned_cols=63 Identities=22% Similarity=0.152 Sum_probs=34.4
Q ss_pred ceEEEeecCCce---EEE--Eeec--ceeeeeeeeE-----Ecc-chhHHHHHHHHhhcc----EEECCCChhhHHHHHH
Q 032585 63 GFSLGVDLGLSR---TGL--ALSK--GFCVRPLTVL-----KLR-GEKLELQLLEIAQRE----VILGSYEPQLNLLSKK 125 (137)
Q Consensus 63 gRiLGlD~GtKR---IGV--AVSd--giiAsPL~tI-----~~~-~~~~~~~L~eli~ee----vVVGtEgp~A~kVr~F 125 (137)
.|+||||+|... +|+ |+-| |-.-- ..+| +.. .....+.|.+++.++ |+||..+. .+++|
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~-~~~i~~~~~~~~~~~~a~~~l~~li~~~~~~vIaIGn~sr---et~~l 591 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIR-DYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGINGPNP---KTQKF 591 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEE-EEEECSCTTCSSCSHHHHHHHHHHHHHHCCSEEEECCSST---HHHHH
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEE-EEEEcCCCCChhhHHHHHHHHHHHHHHcCCcEEEECCCCH---HHHHH
Confidence 499999999863 344 4442 32221 1222 111 123456788888875 99995333 34444
Q ss_pred HHHH
Q 032585 126 KLRW 129 (137)
Q Consensus 126 A~rL 129 (137)
...|
T Consensus 592 ~~~l 595 (1219)
T 3psi_A 592 YKRL 595 (1219)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 80
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=24.61 E-value=46 Score=26.32 Aligned_cols=19 Identities=32% Similarity=0.268 Sum_probs=16.2
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++..|||+|-.
T Consensus 336 ~~~yvvfD~~~~~igfa~~ 354 (361)
T 1mpp_A 336 RFFVNVYDFGKNRIGFAPL 354 (361)
T ss_dssp TTEEEEEETTTTEEEEEEB
T ss_pred ccEEEEEECCCCEEEEEEc
Confidence 4567789999999999976
No 81
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=24.55 E-value=48 Score=25.65 Aligned_cols=18 Identities=28% Similarity=0.634 Sum_probs=16.1
Q ss_pred eEEEeecCCceEEEEeec
Q 032585 64 FSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 64 RiLGlD~GtKRIGVAVSd 81 (137)
-++|||.|+..|=+++-|
T Consensus 4 ~~lGiD~Gst~~k~~l~d 21 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK 21 (270)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccceEEEEEEe
Confidence 579999999999999973
No 82
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=24.47 E-value=1.1e+02 Score=25.80 Aligned_cols=29 Identities=10% Similarity=0.266 Sum_probs=20.1
Q ss_pred ceEEEeecCCceEEEEeec---ceee---eeeeeE
Q 032585 63 GFSLGVDLGLSRTGLALSK---GFCV---RPLTVL 91 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVSd---giiA---sPL~tI 91 (137)
+-+||||+||.-+=+++-| .+++ .++.++
T Consensus 4 kYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~ 38 (526)
T 3ezw_A 4 KYIVALDQGTTSSRAVVMDHDANIISVSQREFEQI 38 (526)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCB
T ss_pred eEEEEEEccccceeeeEEcCCCCEEEEEEEecCcc
Confidence 4689999999988777763 3444 455544
No 83
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=24.00 E-value=50 Score=25.90 Aligned_cols=18 Identities=11% Similarity=-0.069 Sum_probs=15.1
Q ss_pred cceEEEeec-CCceEEEEe
Q 032585 62 GGFSLGVDL-GLSRTGLAL 79 (137)
Q Consensus 62 ~gRiLGlD~-GtKRIGVAV 79 (137)
+..++.+|+ +.+|||+|-
T Consensus 310 ~~~y~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 310 KAAFVVFNGATTPTLGFAS 328 (329)
T ss_dssp TTEEEEEECSSSCEEEEEE
T ss_pred cCEEEEEECCCCceEEEec
Confidence 346788999 999999983
No 84
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=23.84 E-value=43 Score=26.90 Aligned_cols=19 Identities=37% Similarity=0.518 Sum_probs=16.7
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 355 ~~~yvvfD~~~~rIGfA~~ 373 (402)
T 3vf3_A 355 EGFYVVFDRARKRIGFAVS 373 (402)
T ss_dssp TTEEEEEEGGGTEEEEEEE
T ss_pred CCeEEEEECCCCEEEEEec
Confidence 4567779999999999988
No 85
>2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: a.284.1.1
Probab=23.47 E-value=46 Score=23.23 Aligned_cols=25 Identities=8% Similarity=0.040 Sum_probs=20.9
Q ss_pred EEEC-----------CCChhhHHHHHHHHHHHHhcC
Q 032585 110 VILG-----------SYEPQLNLLSKKKLRWFYYCD 134 (137)
Q Consensus 110 vVVG-----------tEgp~A~kVr~FA~rL~~~~~ 134 (137)
.|+| .+..+...+++||+.|.+.+.
T Consensus 35 MvLGNmvTNlln~~V~~~qR~~iAe~Fa~AL~~Svk 70 (83)
T 2jrx_A 35 MVLGNMVTNLINTSIAPAQRQAIANSFARALQSSIN 70 (83)
T ss_dssp HHHHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHhc
Confidence 8888 567788889999999998754
No 86
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=23.07 E-value=41 Score=26.22 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=15.1
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
..++.+|++.+|||+|-+
T Consensus 306 ~~y~vfD~~~~~igfa~a 323 (324)
T 1am5_A 306 NYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp HEEEEEETTTTEEEEEEB
T ss_pred cEEEEEECCCCEEEEEEC
Confidence 467789999999999953
No 87
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=23.03 E-value=51 Score=26.21 Aligned_cols=30 Identities=23% Similarity=0.304 Sum_probs=20.7
Q ss_pred cceEEEeecCCceEEEEeec--ceeeeeeeeE
Q 032585 62 GGFSLGVDLGLSRTGLALSK--GFCVRPLTVL 91 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVSd--giiAsPL~tI 91 (137)
+..++.+|++.+|||+|-+. ....+.+..|
T Consensus 336 ~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 367 (383)
T 2ewy_A 336 EGFYVIFDRAQKRVGFAASPCAEIAGAAVSEI 367 (383)
T ss_dssp TTEEEEEETTTTEEEEEECTTCBSSSCBCEEE
T ss_pred CCeeEEEECCCCeEEEEeccCCCcCCcceeee
Confidence 34677899999999999983 2223444444
No 88
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.70 E-value=1.5e+02 Score=21.63 Aligned_cols=36 Identities=6% Similarity=-0.047 Sum_probs=27.9
Q ss_pred hhHHHHHHHHhhcc---E--EECCCChhhHHHHHHHHHHHH
Q 032585 96 EKLELQLLEIAQRE---V--ILGSYEPQLNLLSKKKLRWFY 131 (137)
Q Consensus 96 ~~~~~~L~eli~ee---v--VVGtEgp~A~kVr~FA~rL~~ 131 (137)
+.+-+.|.++++.| + ||=...+.|+++-+|...|..
T Consensus 36 qelkdsieelvkkynativvvvvddkewaekairfvkslga 76 (134)
T 2l69_A 36 QELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGA 76 (134)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCC
Confidence 45667899999997 3 333888999999999988753
No 89
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=22.52 E-value=52 Score=27.19 Aligned_cols=19 Identities=37% Similarity=0.518 Sum_probs=16.8
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-+
T Consensus 401 ~~~yvvfD~~~~rIGfA~~ 419 (455)
T 3lpj_A 401 EGFYVVFDRARKRIGFAVS 419 (455)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCEEEEEec
Confidence 4567789999999999988
No 90
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=21.83 E-value=43 Score=23.38 Aligned_cols=26 Identities=12% Similarity=0.036 Sum_probs=19.9
Q ss_pred EEEC-----------CCChhhHHHHHHHHHHHHhcCC
Q 032585 110 VILG-----------SYEPQLNLLSKKKLRWFYYCDG 135 (137)
Q Consensus 110 vVVG-----------tEgp~A~kVr~FA~rL~~~~~~ 135 (137)
.|+| .+..+...+++||+.|.+.+..
T Consensus 35 MvLGNmvTNlln~~V~~~qR~~iAe~Fa~AL~~Svk~ 71 (83)
T 2jpq_A 35 MIAGNIATNVLNQRVAASQRKLIAEKFAQALMSSLET 71 (83)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 8888 4555667789999999987643
No 91
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=21.72 E-value=44 Score=26.45 Aligned_cols=18 Identities=39% Similarity=0.414 Sum_probs=15.8
Q ss_pred ceEEEeecCCceEEEEee
Q 032585 63 GFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 63 gRiLGlD~GtKRIGVAVS 80 (137)
..++.+|++.+|||+|-.
T Consensus 324 ~~y~vfD~~~~rigfA~~ 341 (351)
T 1tzs_A 324 QFYSVFDRGNNRVGLAPA 341 (351)
T ss_dssp HEEEEEETTTTEEEEEEB
T ss_pred heEEEEECCCCEEEEEEC
Confidence 467789999999999986
No 92
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=21.58 E-value=80 Score=23.44 Aligned_cols=21 Identities=29% Similarity=0.504 Sum_probs=17.1
Q ss_pred ccceEEEeecCCceEEEEeec
Q 032585 61 RGGFSLGVDLGLSRTGLALSK 81 (137)
Q Consensus 61 ~~gRiLGlD~GtKRIGVAVSd 81 (137)
....+.|||+|+-.|=++|.+
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~ 46 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTD 46 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEEC
T ss_pred CCCEEEEEEcccceEEEEEEC
Confidence 345699999999999888863
No 93
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.01 E-value=72 Score=27.35 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=16.8
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
.|.++|||+|...+=+++-
T Consensus 60 ~G~~laiDlGGTnirv~lV 78 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILI 78 (457)
T ss_dssp CEEEEEEEECSSEEEEEEE
T ss_pred cceEEEEEeCCCeEEEEEE
Confidence 5789999999999888887
No 94
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1
Probab=20.38 E-value=48 Score=22.99 Aligned_cols=24 Identities=13% Similarity=-0.015 Sum_probs=19.4
Q ss_pred EEEC-----------CCChhhHHHHHHHHHHHHhc
Q 032585 110 VILG-----------SYEPQLNLLSKKKLRWFYYC 133 (137)
Q Consensus 110 vVVG-----------tEgp~A~kVr~FA~rL~~~~ 133 (137)
.|+| .+..+...+++||+.|.+.+
T Consensus 35 MvLGN~vTnlln~~V~~~qR~~iAe~Fa~AL~~Sv 69 (80)
T 2juz_A 35 IALGNMASNLLTTSVPQTQCEALAQAFSNSLINAV 69 (80)
T ss_dssp HHHHHHHHHHHTTSSCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 8888 56677788999999998753
No 95
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=20.27 E-value=1e+02 Score=24.74 Aligned_cols=19 Identities=37% Similarity=0.518 Sum_probs=16.5
Q ss_pred cceEEEeecCCceEEEEee
Q 032585 62 GGFSLGVDLGLSRTGLALS 80 (137)
Q Consensus 62 ~gRiLGlD~GtKRIGVAVS 80 (137)
+..++.+|++.+|||+|-.
T Consensus 348 ~~~yvvfD~~~~rIGfA~~ 366 (395)
T 2qp8_A 348 EGFYVVFDRARKRIGFAVS 366 (395)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred CCeeEEEECCCCEEEEEec
Confidence 3467789999999999988
Done!