Query 032587
Match_columns 137
No_of_seqs 98 out of 100
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 04:50:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/032587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2peq_A ORF134; helix bundle, p 100.0 2E-36 6.7E-41 230.7 9.9 77 56-135 7-83 (134)
2 3ka1_A RBCX protein; chaperone 100.0 3.2E-36 1.1E-40 227.7 9.1 77 56-135 7-83 (126)
3 2py8_A Hypothetical protein RB 100.0 8.8E-36 3E-40 230.0 9.9 77 56-135 7-83 (147)
4 3hyb_A RBCX protein; rubisco, 100.0 6.2E-35 2.1E-39 226.8 11.0 86 46-135 14-102 (155)
5 2l9d_A Uncharacterized protein 55.6 3 0.0001 30.5 0.5 26 75-100 66-91 (108)
6 2w9y_A CE-FAR-7, fatty acid/re 40.0 62 0.0021 24.3 5.6 54 76-132 21-75 (140)
7 2p1h_A APAF-1, apoptotic prote 37.3 68 0.0023 20.9 5.0 38 82-121 50-87 (94)
8 2fjc_A Antigen TPF1; mini ferr 34.9 90 0.0031 22.3 5.7 29 85-124 42-70 (156)
9 2z6o_A UFM1-conjugating enzyme 34.4 14 0.00049 28.8 1.3 26 99-127 27-52 (172)
10 4b4s_A BCL-2-like protein 10; 34.1 36 0.0012 26.0 3.5 37 57-93 9-62 (175)
11 3t5t_A Putative glycosyltransf 29.8 6.1 0.00021 34.6 -1.7 83 44-126 400-487 (496)
12 3v5w_G G gamma-I, guanine nucl 28.6 40 0.0014 23.1 2.6 32 69-100 15-53 (77)
13 2rg8_A Programmed cell death p 25.6 65 0.0022 23.8 3.6 34 53-86 4-40 (165)
14 1bgf_A STAT-4; transcription f 25.2 24 0.00081 25.7 1.1 11 124-134 29-39 (124)
15 3vu7_H DNA repair protein REV1 20.2 1.7E+02 0.0057 21.1 4.8 23 46-68 28-50 (124)
No 1
>2peq_A ORF134; helix bundle, protein complex assembly, chaperone; 1.90A {Synechococcus SP} SCOP: a.280.1.1 PDB: 2pem_A 2pen_A 2z44_A 2z45_A 2z46_A 2pek_A 2pej_A 2pei_A
Probab=100.00 E-value=2e-36 Score=230.68 Aligned_cols=77 Identities=38% Similarity=0.514 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHHHHHHHHHHHHhhhh
Q 032587 56 EAKGAKHLHNFFTYIAVRIITAQLQSYNPEAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLALRILEVSKFYLGWYL 135 (137)
Q Consensus 56 E~daAk~L~~yfTy~AvRvVl~QL~e~np~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAlRIMeVRe~ya~~~l 135 (137)
++|||++|++||||+|||||++||+||||+.|.||++|+++||++|||+||++||+|+ ++||+|||+||+|||+++.
T Consensus 7 ~~daAk~L~~yfTy~AvR~Vl~QL~e~np~~~~wL~~F~~~~~l~DGd~fL~~L~~e~---~~LAlRIM~VRe~ya~e~~ 83 (134)
T 2peq_A 7 AKETAITLQSYLTYQAVRLISQQLSETNPGQAIWLGEFSKRHPIQESDLYLEAMMLEN---KELVLRILTVRENLAEGVL 83 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSCTTSHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHhcCCCccHHHHHHHHHhHC---HHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999 9999999999999999863
No 2
>3ka1_A RBCX protein; chaperone, helix bundle, rubisco assembly; 1.71A {Thermosynechococcus elongatus bp-1} PDB: 3q20_A
Probab=100.00 E-value=3.2e-36 Score=227.67 Aligned_cols=77 Identities=29% Similarity=0.467 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHHHHHHHHHHHHhhhh
Q 032587 56 EAKGAKHLHNFFTYIAVRIITAQLQSYNPEAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLALRILEVSKFYLGWYL 135 (137)
Q Consensus 56 E~daAk~L~~yfTy~AvRvVl~QL~e~np~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAlRIMeVRe~ya~~~l 135 (137)
.+|+|++|++||||+|||+|++||+||||+.|.||++|+++||++|||+||++||+|+ ++||+|||+||+|||+|+.
T Consensus 7 a~Dtak~L~~yfTY~Avr~Vl~QL~E~np~~~~wL~~F~~~~~~~DGe~fl~~L~~E~---~~LA~RIM~vR~hla~~v~ 83 (126)
T 3ka1_A 7 AKQTTKTLISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALFREQ---PDLGFRILTVREHLAEMVA 83 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHcCCCccHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999999998 8999999999999999974
No 3
>2py8_A Hypothetical protein RBCX; all helical fold, chaperone; HET: PE4; 2.45A {Synechocystis SP} SCOP: a.280.1.1
Probab=100.00 E-value=8.8e-36 Score=230.02 Aligned_cols=77 Identities=32% Similarity=0.461 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHHHHHHHHHHHHhhhh
Q 032587 56 EAKGAKHLHNFFTYIAVRIITAQLQSYNPEAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLALRILEVSKFYLGWYL 135 (137)
Q Consensus 56 E~daAk~L~~yfTy~AvRvVl~QL~e~np~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAlRIMeVRe~ya~~~l 135 (137)
.+|||++|++||||+|||||++||+|+||+.|.||++|+++|||+|||+||++||+|+ ++||+|||+||+|||+|+.
T Consensus 7 ~kdaAk~L~~yfTy~AvR~VL~QL~EtNP~~y~wL~~Fl~~npl~DGd~fL~~Lmre~---~~LAlRIMeVR~~ya~e~f 83 (147)
T 2py8_A 7 AQATVKVLQSYLTYQAVLRIQSELGETNPPQAIWLNQYLASHSIQNGETFLTELLDEN---KELVLRILAVREDIAESVL 83 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSCCSSHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHhcCCCccHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999999998 8999999999999999975
No 4
>3hyb_A RBCX protein; rubisco, protein complex assembly, chaperone; HET: SO4; 2.30A {Anabaena SP} PDB: 2wvw_I 2peo_A* 3rg6_C
Probab=100.00 E-value=6.2e-35 Score=226.76 Aligned_cols=86 Identities=31% Similarity=0.408 Sum_probs=78.9
Q ss_pred eecCCCCCChh---HHHHHHHHHHHHHHHHHHHHHHhhccChhhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHHH
Q 032587 46 YVPGFGEASPE---AKGAKHLHNFFTYIAVRIITAQLQSYNPEAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLALR 122 (137)
Q Consensus 46 ~Vp~fGG~sPE---~daAk~L~~yfTy~AvRvVl~QL~e~np~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAlR 122 (137)
.||.-.-+..- +|||++|++||||+|||||++||+||||+.|.||++|++ +|++|||+||++||+|+ ++||+|
T Consensus 14 ~~~~~~~m~~k~iakDtak~L~~YfTYqAvr~VLaQL~EtNP~~y~wL~~F~s-~~iqDGe~fl~~L~~E~---~~LA~R 89 (155)
T 3hyb_A 14 LVPRGSHMNLKQIAKDTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNFSA-GKVQDGEKYIEELFLEK---PDLALR 89 (155)
T ss_dssp SSCSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHT-TCCSSHHHHHHHHHHHC---HHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHc-CCcccHHHHHHHHHhhC---HHHHHH
Confidence 45544444544 999999999999999999999999999999999999999 99999999999999998 899999
Q ss_pred HHHHHHHHHhhhh
Q 032587 123 ILEVSKFYLGWYL 135 (137)
Q Consensus 123 IMeVRe~ya~~~l 135 (137)
||+||+|||+|+.
T Consensus 90 IM~VRehlae~v~ 102 (155)
T 3hyb_A 90 IMTVREHIAEEIA 102 (155)
T ss_dssp HHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999974
No 5
>2l9d_A Uncharacterized protein; PG9854E, structural genomics, PSI-biology, protein structure initiative, unknown function; NMR {Methylobacillus flagellatus}
Probab=55.59 E-value=3 Score=30.49 Aligned_cols=26 Identities=35% Similarity=0.695 Sum_probs=23.2
Q ss_pred HHHHhhccChhhHHHHHHHHhcCCCC
Q 032587 75 ITAQLQSYNPEAYKELMEFLERHPLN 100 (137)
Q Consensus 75 Vl~QL~e~np~~y~wL~~Fl~~~pl~ 100 (137)
|=.+|++.+|.+|..+++|...|.|+
T Consensus 66 Vd~~L~~~~P~af~fvm~FA~dN~L~ 91 (108)
T 2l9d_A 66 VDLKLKDTNPEGFNQLMHFATENQLN 91 (108)
T ss_dssp EETHHHHHCHHHHHHHHHHHHHHTEE
T ss_pred ECcHhhhcChHHHHHHHHHHHhCCce
Confidence 44689999999999999999999985
No 6
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=40.01 E-value=62 Score=24.28 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=32.8
Q ss_pred HHHhhccChhhHHHHHHHHhcCCC-CcHHHHHHHHHhcccCCchhHHHHHHHHHHHHh
Q 032587 76 TAQLQSYNPEAYKELMEFLERHPL-NDGDKFCADLMRESSRHKGLALRILEVSKFYLG 132 (137)
Q Consensus 76 l~QL~e~np~~y~wL~~Fl~~~pl-~DGd~fL~~Lmre~~~~~~LAlRIMeVRe~ya~ 132 (137)
..-+.+-+++.=.-|.++..++.= ++-|++|++|=..+ ++|..|++.+|..+-+
T Consensus 21 ~~f~~~Lt~eeK~~Lkev~kn~~~f~~e~e~i~alK~KS---p~L~~K~~~l~~~lk~ 75 (140)
T 2w9y_A 21 LEFSSSITADEKPVLHEVFQKHSCFSQCGEMIDEVSKKH---PELGKRLATVLEGNKK 75 (140)
T ss_dssp HHHHHHCCTTTHHHHHHHHTTCCC----TTHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHhC---HHHHHHHHHHHHHHHH
Confidence 333444555555556666654432 34567888887777 7888888888876644
No 7
>2p1h_A APAF-1, apoptotic protease-activating factor 1; folding, unfolding, apoptosis; 1.59A {Homo sapiens} SCOP: a.77.1.3 PDB: 1cww_A 1c15_A 1cy5_A 3ygs_C 2ygs_A
Probab=37.32 E-value=68 Score=20.90 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=26.2
Q ss_pred cChhhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHH
Q 032587 82 YNPEAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLAL 121 (137)
Q Consensus 82 ~np~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAl 121 (137)
++......|.+.+.+...+--+.|+.+|-..+. +.||.
T Consensus 50 t~~~kar~Lld~l~~kG~~af~~F~~aL~~~~~--~~La~ 87 (94)
T 2p1h_A 50 TQQQRAAMLIKMILKKDNDSYVSFYNALLHEGY--KDLAA 87 (94)
T ss_dssp SHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTC--HHHHH
T ss_pred ChHHHHHHHHHHHHHcCHHHHHHHHHHHHHcCH--HHHHH
Confidence 445567788888876555556888999987762 35654
No 8
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=34.94 E-value=90 Score=22.27 Aligned_cols=29 Identities=24% Similarity=0.455 Sum_probs=15.0
Q ss_pred hhHHHHHHHHhcCCCCcHHHHHHHHHhcccCCchhHHHHH
Q 032587 85 EAYKELMEFLERHPLNDGDKFCADLMRESSRHKGLALRIL 124 (137)
Q Consensus 85 ~~y~wL~~Fl~~~pl~DGd~fL~~Lmre~~~~~~LAlRIM 124 (137)
+.+..|+.++. +.....+..- -++|+||.
T Consensus 42 ~~f~~lh~~~e--------e~~~e~~~~a---D~lAERI~ 70 (156)
T 2fjc_A 42 IEFKQVHELLE--------EYYVSVTEAF---DTIAERLL 70 (156)
T ss_dssp TTHHHHHHHHH--------HHHHHHHHHH---HHHHHHHH
T ss_pred CcHHHHHHHHH--------HHHHHHHHHH---HHHHHHHH
Confidence 34555555555 3344444444 35666665
No 9
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=34.40 E-value=14 Score=28.81 Aligned_cols=26 Identities=15% Similarity=0.134 Sum_probs=19.1
Q ss_pred CCcHHHHHHHHHhcccCCchhHHHHHHHH
Q 032587 99 LNDGDKFCADLMRESSRHKGLALRILEVS 127 (137)
Q Consensus 99 l~DGd~fL~~Lmre~~~~~~LAlRIMeVR 127 (137)
++|||+|.+.|++|- +.|-..+-.+-
T Consensus 27 p~~~~~w~~RL~eE~---k~L~k~v~p~k 52 (172)
T 2z6o_A 27 PRDRELWVQRLKEEY---QSLIRYVENNK 52 (172)
T ss_dssp TTCTHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHH---HHHHHHhccCc
Confidence 679999999999997 56654443333
No 10
>4b4s_A BCL-2-like protein 10; apoptosis; HET: PG4; 1.90A {Homo sapiens}
Probab=34.14 E-value=36 Score=26.00 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHH-----------------HHHHHHHhhccChhhHHHHHHH
Q 032587 57 AKGAKHLHNFFTYIA-----------------VRIITAQLQSYNPEAYKELMEF 93 (137)
Q Consensus 57 ~daAk~L~~yfTy~A-----------------vRvVl~QL~e~np~~y~wL~~F 93 (137)
+.|...+.+|+.|++ +|-|-++++...+..|..+.++
T Consensus 9 ~~t~~L~~DYl~y~~r~p~~p~~~p~s~~aa~LR~va~ele~~~~~~f~~~~~~ 62 (175)
T 4b4s_A 9 ERTELLLADYLGYSAREPGTPEPAPSTPEAAVLRSAAARLRQIHRSFFSAYLGY 62 (175)
T ss_dssp HHHHHHHHHHHHHHTSCTTSCCCCCSSHHHHHHHHHHHHHHHHTHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456677777777664 6777788887666655554443
No 11
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=29.79 E-value=6.1 Score=34.56 Aligned_cols=83 Identities=11% Similarity=-0.016 Sum_probs=44.5
Q ss_pred ceeecCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccChh----hHHHHHHHHhcCCCCc-HHHHHHHHHhcccCCch
Q 032587 44 KMYVPGFGEASPEAKGAKHLHNFFTYIAVRIITAQLQSYNPE----AYKELMEFLERHPLND-GDKFCADLMRESSRHKG 118 (137)
Q Consensus 44 km~Vp~fGG~sPE~daAk~L~~yfTy~AvRvVl~QL~e~np~----~y~wL~~Fl~~~pl~D-Gd~fL~~Lmre~~~~~~ 118 (137)
-+++..|+|..++-.....|.|-....++--.|.++-++.++ ....+++++.++.++. .+.||+.|-...+.+..
T Consensus 400 ~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~~~ 479 (496)
T 3t5t_A 400 DVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAARTA 479 (496)
T ss_dssp EEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC--
T ss_pred CEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccchhh
Confidence 467778999877742122344444445554445555444433 4667888888887754 77778888665544456
Q ss_pred hHHHHHHH
Q 032587 119 LALRILEV 126 (137)
Q Consensus 119 LAlRIMeV 126 (137)
.|+|.=++
T Consensus 480 ~~~~~~~~ 487 (496)
T 3t5t_A 480 TAERFDTA 487 (496)
T ss_dssp --------
T ss_pred hhhhcccC
Confidence 67665443
No 12
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*
Probab=28.60 E-value=40 Score=23.12 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhh-cc--C----hhhHHHHHHHHhcCCCC
Q 032587 69 YIAVRIITAQLQ-SY--N----PEAYKELMEFLERHPLN 100 (137)
Q Consensus 69 y~AvRvVl~QL~-e~--n----p~~y~wL~~Fl~~~pl~ 100 (137)
-.+.|.+..||. |. + .++..+|.+|..+|--.
T Consensus 15 i~q~rk~VeQLr~Ea~i~RikVSqaaadL~~yc~~~~~~ 53 (77)
T 3v5w_G 15 IAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKE 53 (77)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhcCCC
Confidence 467799999998 33 2 46789999999876443
No 13
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=25.59 E-value=65 Score=23.82 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=26.5
Q ss_pred CChh---HHHHHHHHHHHHHHHHHHHHHHhhccChhh
Q 032587 53 ASPE---AKGAKHLHNFFTYIAVRIITAQLQSYNPEA 86 (137)
Q Consensus 53 ~sPE---~daAk~L~~yfTy~AvRvVl~QL~e~np~~ 86 (137)
.|+| +++...|..||.-.=+.-++.-++|.|.+.
T Consensus 4 ~s~ee~~kk~~~ii~EYf~~~D~~Ea~~~l~eL~~p~ 40 (165)
T 2rg8_A 4 LDERAFEKTLTPIIQEYFEHGDTNEVAEMLRDLNLGE 40 (165)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTCSG
T ss_pred CCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCcc
Confidence 4555 688888999999887888888888877554
No 14
>1bgf_A STAT-4; transcription factor, regulation, DNA-binding; 1.45A {Mus musculus} SCOP: a.90.1.1
Probab=25.23 E-value=24 Score=25.72 Aligned_cols=11 Identities=18% Similarity=0.703 Sum_probs=9.7
Q ss_pred HHHHHHHHhhh
Q 032587 124 LEVSKFYLGWY 134 (137)
Q Consensus 124 MeVRe~ya~~~ 134 (137)
||||-++|.||
T Consensus 29 iEvRhyLA~WI 39 (124)
T 1bgf_A 29 MEIRHLLAQWI 39 (124)
T ss_dssp HHHHHHTHHHH
T ss_pred HHHHHHHHHHH
Confidence 78999999997
No 15
>3vu7_H DNA repair protein REV1; DNA replication, translesion DNA synthesis, damage tolerance, DNA repair, replication; HET: DNA; 2.80A {Homo sapiens} PDB: 2lsj_A*
Probab=20.19 E-value=1.7e+02 Score=21.15 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=19.1
Q ss_pred eecCCCCCChhHHHHHHHHHHHH
Q 032587 46 YVPGFGEASPEAKGAKHLHNFFT 68 (137)
Q Consensus 46 ~Vp~fGG~sPE~daAk~L~~yfT 68 (137)
=+|.|.|+++-.|.-.+|...++
T Consensus 28 ~~P~f~g~t~l~evK~lL~~Wv~ 50 (124)
T 3vu7_H 28 PAPNLAGAVEFNDVKTLLREWIT 50 (124)
T ss_dssp --CCCSSSCSHHHHHHHHHHHHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHH
Confidence 46799999999999999998886
Done!