BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032590
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/137 (85%), Positives = 129/137 (94%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ADFKKRYGGGKA TAIAKSLNKEFGP+MKEHM YI+DHAEEIEKLIKVKAQVSEVKSI
Sbjct: 86 VKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSI 145
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
MLENIDKA+DRGEN+ L DKTENLR QAQ YKK GTQ+RRK+WYQNMKIKLVVLGILL+
Sbjct: 146 MLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLL 205
Query: 121 LVLIIWLSVCHGFDCTN 137
LVLIIW+SVCHGF+CT+
Sbjct: 206 LVLIIWISVCHGFNCTD 222
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 111/136 (81%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ DF KRYGGGKA TA A SLNKEFG +KEHM+Y DH EEI KL KVKAQV+EVK +
Sbjct: 85 VKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGV 144
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
M+ENI+K +DRGE I+ L DKTENLR QAQ ++ GT+++RK+W++NMKIKL+V GI++
Sbjct: 145 MMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVA 204
Query: 121 LVLIIWLSVCHGFDCT 136
L+LII LSVCHGF CT
Sbjct: 205 LILIIILSVCHGFKCT 220
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 110/135 (81%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ DF KRYGGGKA TA A SLNKEFG +KEHM+Y +DH +EI KL KVKAQVSEVK +
Sbjct: 85 VKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGV 144
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
M+ENI+K +DRGE I+ L DKTENLR QAQ ++ GTQ+RRKMW QNMKIKL+VL I++
Sbjct: 145 MMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIA 204
Query: 121 LVLIIWLSVCHGFDC 135
L+LII LSVCHGF C
Sbjct: 205 LILIIVLSVCHGFKC 219
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/136 (66%), Positives = 112/136 (82%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ DF KRYGGGKA TA A SLN+EFG +KEHM+Y +DH +EI KL KVKAQV+EVK +
Sbjct: 150 VKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGV 209
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
M+ENI+K +DRGE I+ L DKTENLR QAQ ++ GT+IRRKMW++NMKIKL+VLGI++
Sbjct: 210 MMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIIT 269
Query: 121 LVLIIWLSVCHGFDCT 136
L+LII LSVC GF CT
Sbjct: 270 LILIIILSVCGGFKCT 285
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 111/135 (82%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ DF KRYGGGKA TA A SLNKEFG +KEHM+Y +DH +EI KL KVKAQVSEVK +
Sbjct: 85 VKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGV 144
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
M+ENI+K +DRGE I+ L DKTENLR QAQ ++ GTQ+RRKMW+QNMKIKL+VL I++
Sbjct: 145 MMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIA 204
Query: 121 LVLIIWLSVCHGFDC 135
L+LII LS+C GF+C
Sbjct: 205 LILIIILSICGGFNC 219
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 96/121 (79%)
Query: 17 AIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQ 76
++A +L++EFGPI+KEHM+Y + H EE+ KL K+KAQ++EVK IM++NI+K +DRGE I+
Sbjct: 120 SVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIE 179
Query: 77 NLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVLIIWLSVCHGFDCT 136
L DKTENL+ QA ++++ G Q+RRKMW Q++++KL+V G + +LI+W+ C GF C+
Sbjct: 180 LLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKCS 239
Query: 137 N 137
+
Sbjct: 240 S 240
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 95/135 (70%), Gaps = 4/135 (2%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
++ DF KRYGG KA T A SLNKEFG +KEHM+Y +DH +EI L K KAQVSEVKS+
Sbjct: 85 VKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSL 144
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
M+ENI+K + RG + L Q QA+ TQ++RK W+QNMKIKL+VL I++
Sbjct: 145 MMENIEKVLARGVICEMLGSS----ESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIA 200
Query: 121 LVLIIWLSVCHGFDC 135
L+LII LSVC GF+C
Sbjct: 201 LILIIILSVCGGFNC 215
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLEN 64
F K YG +A A S+N EF ++ + M++ + +++ ++K ++S+V+++M+EN
Sbjct: 88 FVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIEN 145
Query: 65 IDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVLI 124
IDK +DRGE ++ L DKTEN++ ++K + R MW++N+K+ + ++ +L ++V I
Sbjct: 146 IDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYI 205
Query: 125 IWLSVCHG 132
VCHG
Sbjct: 206 AMAFVCHG 213
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLEN 64
F K YG A A A ++N EF ++ + M++ + ++ L +V+ +VSE++S+M+EN
Sbjct: 88 FMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVEN 145
Query: 65 IDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVLI 124
I+K ++RG+ I+ L DKT +++ + ++K ++RR +W +N K+ +++ +++ L+ I
Sbjct: 146 IEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYI 205
Query: 125 IWLSVCHG 132
I S C G
Sbjct: 206 IIASFCGG 213
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 81/128 (63%), Gaps = 2/128 (1%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLEN 64
F + YG TA+A ++N+EF ++ + + Y + +++ ++K ++++V+ +M+EN
Sbjct: 87 FVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIEN 144
Query: 65 IDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVLI 124
IDK +DRGE ++ L DKT N++ ++K + R +W++N K+ ++++ +LL+++ I
Sbjct: 145 IDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLLLVIIYI 204
Query: 125 IWLSVCHG 132
+CHG
Sbjct: 205 AVAFLCHG 212
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 4 DFKKRYG---GGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVK 58
+ KKR+ G +A TA+ ++N EF ++ +K+ H+E ++K+++ +AQV E+K
Sbjct: 81 EIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELK 137
Query: 59 SIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGIL 118
IM+ NID RGE ++ L DKTENL + + +K + R M +N+K+ ++++ I
Sbjct: 138 GIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIIS 197
Query: 119 LILVLIIWLSVCHGFDCTN 137
++ + II +C GF N
Sbjct: 198 VVFIYIIVSPLCGGFTWPN 216
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
Query: 4 DFKKRYG---GGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVK 58
+ KKR+ G +A TA+ ++N EF ++ +K+ H+E ++K+++ +AQV E+K
Sbjct: 81 EIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELK 137
Query: 59 SIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGIL 118
IM+ NID RGE ++ L DKTENL + + +K + R M +N+K+ ++++ +
Sbjct: 138 GIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVS 197
Query: 119 LILVLIIWLSVCHGF 133
++ + II +C GF
Sbjct: 198 IVFIYIIVSPLCGGF 212
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
Query: 4 DFKKRYG---GGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVK 58
+ KKR+ G +A TA+ ++N EF ++ +K+ H+E ++K+++ +AQV E+K
Sbjct: 81 EIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELK 137
Query: 59 SIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGIL 118
IM+ NID RGE ++ L DKTENL + + +K + R M +N+K+ ++++ +
Sbjct: 138 GIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIVS 197
Query: 119 LILVLIIWLSVCHGF 133
++ + II +C GF
Sbjct: 198 IVFIYIIVSPLCGGF 212
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 8/112 (7%)
Query: 4 DFKKRYG---GGKADTAIAKSLNKEFGPIMKEHMKYIIDHAE--EIEKLIKVKAQVSEVK 58
+ KKR+ G +A TA+ ++N EF ++ +K+ H+E ++K+++ +AQV E+K
Sbjct: 81 EVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKH---HSENKSLDKVMETQAQVDELK 137
Query: 59 SIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKI 110
IM+ NID RGE ++ L DKTENL + + +K + R M +N+K+
Sbjct: 138 GIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKL 189
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 8/112 (7%)
Query: 4 DFKKRYG---GGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEE--IEKLIKVKAQVSEVK 58
+ KKR+ G +A TA+ ++N EF ++ +KY H+E +++ + +AQV E+K
Sbjct: 81 EIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELK 137
Query: 59 SIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKI 110
IM+ NID RGE ++ L DKTENL + + +K + R M +N+K+
Sbjct: 138 GIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKL 189
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 77/131 (58%), Gaps = 6/131 (4%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAE--EIEKLIKVKAQVSEVKSIML 62
F+ YG +A TA+ ++N EF ++ +K+ H+E ++++ + +AQV E+K IM+
Sbjct: 86 FQTTYGS-RAQTALPYAMNSEFSSVLAAQLKH---HSENQSLDRVTETQAQVDELKGIMV 141
Query: 63 ENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILV 122
NID RGE ++ L DKTENL + + +K + R M +N+K+ +++ + ++ +
Sbjct: 142 RNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIVVVSIVFI 201
Query: 123 LIIWLSVCHGF 133
II +C GF
Sbjct: 202 YIIVSPLCGGF 212
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLEN 64
FK YG K TAIA +N +F ++ M + + ++ + + A++ EVK+I++ +
Sbjct: 86 FKSMYGD-KGKTAIAYGMNSDFSRTLENLMDHY-SNTTRVDTMSRTMAEIDEVKNILVSD 143
Query: 65 I-DKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVL 123
I + + RGE I+ L ++T+ L +Q+ +KK Q++ MW++N+K+ LV+ I+LI++
Sbjct: 144 IAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKNVKLMLVLGAIVLIIIF 203
Query: 124 IIWLSVCHGF 133
II +S C GF
Sbjct: 204 IIVMSYCDGF 213
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 1 MRADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSI 60
+R F + YG + + + + F +++E MKY + + K+ V QVSE K
Sbjct: 84 IRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKYYSN--PKSNKMNLVMDQVSEAKGA 140
Query: 61 MLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLI 120
+ + I+K + RGE I+ + DKTE L+ ++ +K ++RK+W+QN K+ + + ++ I
Sbjct: 141 LTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQNKKLAIAIGLVVCI 200
Query: 121 LVLIIWLSVCHGF 133
L+ +I L++ F
Sbjct: 201 LIAVITLALLKYF 213
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Query: 5 FKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLEN 64
F + YG +A A ++N EF ++ + ++Y + + + ++K ++++V+ +M+EN
Sbjct: 87 FVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIEN 144
Query: 65 IDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVLI 124
ID +DRGE ++ L DKT N++ ++K + +W++N K+ L+++ +LL+++ I
Sbjct: 145 IDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYI 204
Query: 125 IWLSVCHG 132
CHG
Sbjct: 205 GVAFACHG 212
>sp|Q32L97|VAMP4_BOVIN Vesicle-associated membrane protein 4 OS=Bos taurus GN=VAMP4 PE=2
SV=1
Length = 141
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+K+ V+ QV EV +M ENI K ++RGE + L DK+E+L + A A+ Q+RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 105 YQNMKIKLVV 114
++ KIK ++
Sbjct: 111 WRGCKIKAIM 120
>sp|O75379|VAMP4_HUMAN Vesicle-associated membrane protein 4 OS=Homo sapiens GN=VAMP4 PE=1
SV=2
Length = 141
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+K+ V+ QV EV +M ENI K ++RGE + L DK+E+L + A A+ Q+RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 105 YQNMKIKLVV 114
++ KIK ++
Sbjct: 111 WRGCKIKAIM 120
>sp|O70480|VAMP4_MOUSE Vesicle-associated membrane protein 4 OS=Mus musculus GN=Vamp4 PE=1
SV=1
Length = 141
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+K+ V+ QV EV +M ENI K ++RGE + L DK+E+L + A A+ Q+RR+MW
Sbjct: 51 DKIKHVQNQVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110
Query: 105 YQNMKIK 111
++ KIK
Sbjct: 111 WRGCKIK 117
>sp|P31109|SNC1_YEAST Synaptobrevin homolog 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC1 PE=1 SV=1
Length = 117
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 21 SLNKEFGP-IMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLA 79
S + F P + EH + + + + +++A++ + IM +NI+K +RGE + ++
Sbjct: 2 SSSTPFDPYALSEHDEERPQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGERLTSIE 61
Query: 80 DKTENLREQAQAYKKAGTQIRRKMWYQNMKIKL 112
DK +NL AQ +K+ ++R+ MWY+++K+K+
Sbjct: 62 DKADNLAVSAQGFKRGANRVRKAMWYKDLKMKM 94
>sp|Q92356|SYB1_SCHPO Synaptobrevin homolog 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=syb1 PE=3 SV=1
Length = 121
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
K ++ Q+ + IM ENI K +RGE + +L DKT+NL AQ +++ ++R+KMW+
Sbjct: 31 KTAAIQQQIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWW 90
Query: 106 QNMKIK 111
++M+++
Sbjct: 91 KDMRMR 96
>sp|Q54GB3|SYBB_DICDI Synaptobrevin-B OS=Dictyostelium discoideum GN=sybB PE=3 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 51/81 (62%)
Query: 53 QVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKL 112
+V +VK +M NI ++ + NL DKT ++ A+ +KK IRR+MW +NMK++L
Sbjct: 20 EVDKVKDVMHNNIGLMLNNHDKASNLQDKTASMSNNARLFKKQTVTIRRQMWCRNMKLQL 79
Query: 113 VVLGILLILVLIIWLSVCHGF 133
+++ ++++++ +I + + F
Sbjct: 80 IIIAVVILVLAVILIPIIMKF 100
>sp|P18489|SYB_DROME Synaptobrevin OS=Drosophila melanogaster GN=Syb PE=2 SV=3
Length = 152
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
KL + +A+V EV IM N++K ++R + + L ++ + L + A +++ +++RK W+
Sbjct: 47 KLQQTQAKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWW 106
Query: 106 QNMKIKLVVLGILLILVLIIWL 127
NMK+ +++LG++ +++LII L
Sbjct: 107 ANMKM-MIILGVIAVVLLIIVL 127
>sp|P33328|SNC2_YEAST Synaptobrevin homolog 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SNC2 PE=1 SV=2
Length = 115
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 46/70 (65%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
K ++ ++ + IM +NI+K +RGE + ++ DK +NL AQ +K+ ++R++MW+
Sbjct: 27 KTAALRQEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRVRKQMWW 86
Query: 106 QNMKIKLVVL 115
+++K+++ +
Sbjct: 87 KDLKMRMCLF 96
>sp|Q5REQ5|VAMP8_PONAB Vesicle-associated membrane protein 8 OS=Pongo abelii GN=VAMP8 PE=3
SV=1
Length = 100
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+++ ++++V VK+IM +N+++ + RGEN+++L +KTE+L ++ +K ++ RK W
Sbjct: 11 DRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFW 70
Query: 105 YQNMKIKLVVL 115
++N +K++VL
Sbjct: 71 WKN--VKMIVL 79
>sp|Q9BV40|VAMP8_HUMAN Vesicle-associated membrane protein 8 OS=Homo sapiens GN=VAMP8 PE=1
SV=1
Length = 100
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+++ ++++V VK+IM +N+++ + RGEN+++L +KTE+L ++ +K ++ RK W
Sbjct: 11 DRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFW 70
Query: 105 YQNMKIKLVVL 115
++N +K++VL
Sbjct: 71 WKN--VKMIVL 79
>sp|P35589|SYB_APLCA Synaptobrevin OS=Aplysia californica PE=2 SV=1
Length = 180
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 42 EEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRR 101
E+ ++L + +AQV EV IM N++K +DR + I L D+ E L+ A ++ + +++R
Sbjct: 17 EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKR 76
Query: 102 KMWYQNMKIKLVV 114
K W++N K+ L++
Sbjct: 77 KYWWKNCKMMLIL 89
>sp|O70404|VAMP8_MOUSE Vesicle-associated membrane protein 8 OS=Mus musculus GN=Vamp8 PE=1
SV=1
Length = 101
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 47/66 (71%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+++ ++++V VK+IM +N+++ + RGEN+ +L +KTE+L ++ +K ++ RK W
Sbjct: 11 DRVRNLQSEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 70
Query: 105 YQNMKI 110
++N+K+
Sbjct: 71 WKNVKM 76
>sp|Q3T0Y8|VAMP8_BOVIN Vesicle-associated membrane protein 8 OS=Bos taurus GN=VAMP8 PE=2
SV=1
Length = 100
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+++ ++ +V VK+IM +N+++ + RGEN+ +L +KTE+L ++ +K ++ RK W
Sbjct: 10 DRVRNLRDEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 69
Query: 105 YQNMKIKLVVL 115
++N +K++VL
Sbjct: 70 WKN--VKMIVL 78
>sp|Q9WUF4|VAMP8_RAT Vesicle-associated membrane protein 8 OS=Rattus norvegicus GN=Vamp8
PE=1 SV=1
Length = 100
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 47/66 (71%)
Query: 45 EKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMW 104
+++ ++++V VK+IM +N+++ + RGEN+ +L +KTE+L ++ +K ++ RK W
Sbjct: 10 DRVRNLQSEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFW 69
Query: 105 YQNMKI 110
++N+K+
Sbjct: 70 WKNVKM 75
>sp|P63045|VAMP2_RAT Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2
PE=1 SV=2
Length = 116
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 106 QNMKIKLVVLGI 117
+N+K+ +++LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63044|VAMP2_MOUSE Vesicle-associated membrane protein 2 OS=Mus musculus GN=Vamp2 PE=1
SV=2
Length = 116
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 106 QNMKIKLVVLGI 117
+N+K+ +++LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|Q9N0Y0|VAMP2_MACMU Vesicle-associated membrane protein 2 OS=Macaca mulatta GN=VAMP2
PE=3 SV=3
Length = 116
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 106 QNMKIKLVVLGI 117
+N+K+ +++LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63027|VAMP2_HUMAN Vesicle-associated membrane protein 2 OS=Homo sapiens GN=VAMP2 PE=1
SV=3
Length = 116
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 106 QNMKIKLVVLGI 117
+N+K+ +++LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P63026|VAMP2_BOVIN Vesicle-associated membrane protein 2 OS=Bos taurus GN=VAMP2 PE=1
SV=2
Length = 116
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 31 RLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWW 90
Query: 106 QNMKIKLVVLGI 117
+N+K+ +++LG+
Sbjct: 91 KNLKM-MIILGV 101
>sp|P47193|VAMP2_XENLA Vesicle-associated membrane protein 2 OS=Xenopus laevis GN=vamp2
PE=3 SV=3
Length = 114
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + L D+ + L+ A ++ + +++RK W+
Sbjct: 29 RLQQTQAQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWW 88
Query: 106 QNMKIKLVVLGI 117
+NMK+ ++++G+
Sbjct: 89 KNMKM-MIIMGV 99
>sp|O02495|SYB1_CAEEL Synaptobrevin-1 OS=Caenorhabditis elegans GN=snb-1 PE=1 SV=1
Length = 109
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 46/69 (66%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N++K ++R + + L D+ + L+E A ++K+ ++RK W+
Sbjct: 23 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 82
Query: 106 QNMKIKLVV 114
+N+K+ +++
Sbjct: 83 KNIKMMIIM 91
>sp|Q63666|VAMP1_RAT Vesicle-associated membrane protein 1 OS=Rattus norvegicus GN=Vamp1
PE=1 SV=2
Length = 118
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWW 92
Query: 106 QNMKIKLVVLGIL 118
+N K+ +++LG +
Sbjct: 93 KNCKM-MIMLGAI 104
>sp|Q60WU2|SYB1_CAEBR Synaptobrevin-1 OS=Caenorhabditis briggsae GN=snb-1 PE=3 SV=1
Length = 108
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 46/69 (66%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N++K ++R + + L D+ + L+E A ++K+ ++RK W+
Sbjct: 22 RLQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWW 81
Query: 106 QNMKIKLVV 114
+N+K+ +++
Sbjct: 82 KNIKMMIIM 90
>sp|Q0V7N0|VAMP1_BOVIN Vesicle-associated membrane protein 1 OS=Bos taurus GN=VAMP1 PE=3
SV=2
Length = 118
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 106 QNMKIKLVVLGIL 118
+N K+ +++LG +
Sbjct: 93 KNCKM-MIMLGAI 104
>sp|Q62442|VAMP1_MOUSE Vesicle-associated membrane protein 1 OS=Mus musculus GN=Vamp1 PE=1
SV=1
Length = 118
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 33 RLQQTQAQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 106 QNMKIKLVVLGIL 118
+N K+ +++LG +
Sbjct: 93 KNCKM-MIMLGAI 104
>sp|P47194|SYB_DORPE Synaptobrevin OS=Doryteuthis pealeii PE=1 SV=1
Length = 125
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV IM N+DK ++R I L D+ + L+ A ++ + +++RK W+
Sbjct: 40 RLQQTQAQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWW 99
Query: 106 QNMKIKLVVLG 116
+N K+ +++LG
Sbjct: 100 KNCKM-MIILG 109
>sp|Q6TMJ9|SYBA_DICDI Synaptobrevin-A OS=Dictyostelium discoideum GN=sybA PE=2 SV=1
Length = 95
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 41 AEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIR 100
+E + K+ + + QV +V + M + K +D + + L DK+EN+++ AQ +KK +I+
Sbjct: 2 SEPVNKVKQTQQQVDDVTNTMHIAVGKMLDNQQKVSELTDKSENMKQGAQQFKKKTNEIK 61
Query: 101 RKMWYQNMKI 110
R MW +N+K+
Sbjct: 62 RLMWCRNIKL 71
>sp|Q6C880|SEC22_YARLI Protein transport protein SEC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC22 PE=3 SV=1
Length = 213
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 4 DFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLE 63
+F+K +G + EF M++ K + L K+ ++ +V +M +
Sbjct: 91 EFQKSHGQEALKEGVRPYKFVEFDTFMQK-TKRVYQDTRATHNLDKLNTELQDVTRVMTK 149
Query: 64 NIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMKIKLVVLGILLILVL 123
NI+ + RG ++ +++D + NLR +++ Y++A +I W ++ + +G+ LI +
Sbjct: 150 NIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQRIN---WEAMIRQYIPFIGVGLIGLF 206
Query: 124 IIW 126
++W
Sbjct: 207 MLW 209
>sp|P23763|VAMP1_HUMAN Vesicle-associated membrane protein 1 OS=Homo sapiens GN=VAMP1 PE=1
SV=1
Length = 118
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 46 KLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWY 105
+L + +AQV EV I+ N+DK ++R + + L D+ + L+ A ++ + +++RK W+
Sbjct: 33 RLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWW 92
Query: 106 QNMKIKLVVLGIL 118
+N K+ +++LG +
Sbjct: 93 KNCKM-MIMLGAI 104
>sp|Q12255|NYV1_YEAST Vacuolar v-SNARE NYV1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NYV1 PE=1 SV=2
Length = 253
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 53 QVSEVKSIMLENIDKAVDRGENIQNLADKTENLREQAQAYKKAGTQIRRKMWYQNMK-IK 111
Q+ +V IM +NIDK ++R E + L DKT L + +++ I+ MW+Q +K I
Sbjct: 174 QIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQKVKNIT 233
Query: 112 LVVLGILLIL 121
L+ I+L +
Sbjct: 234 LLTFTIILFV 243
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 25 EFGPIMKEHMKYIIDHAEEIEKLIKVKAQVSEVKSIMLENIDKAVDRGENIQNLADKTEN 84
+F M++ K + + + L K+ ++ +V +M +NI+ + RG++++ +AD + +
Sbjct: 113 QFDTFMQKS-KRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSD 171
Query: 85 LREQAQAYKKAGTQIR-RKMWYQNMKIKLVVLGILLILVLIIW 126
LR + YKKA ++ +W Q + ++ LL L+ + W
Sbjct: 172 LRYSSAKYKKAARRVNLEALWRQYGPVSIIA---LLFLIFVYW 211
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,913,515
Number of Sequences: 539616
Number of extensions: 1638996
Number of successful extensions: 9103
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 8874
Number of HSP's gapped (non-prelim): 373
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)