BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032592
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6VMK7|NDK_ACTSZ Nucleoside diphosphate kinase OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=ndk PE=3 SV=1
Length = 141
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 66/95 (69%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD + N +I E+GF I+ +++RL++ A+ FYAEH + FF L
Sbjct: 4 ERTLSIIKPDAVERNLVGKILSRFEENGFQIVAMKMLRLNQAQAEGFYAEHQGKPFFDGL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++YMTS PV+ VLEK+NA+ D+R LIG TD ++A
Sbjct: 64 VEYMTSAPVVVSVLEKDNAVKDYRTLIGATDPQQA 98
>sp|Q65UT5|NDK_MANSM Nucleoside diphosphate kinase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=ndk PE=3 SV=1
Length = 141
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N +I +SGF I+ ++VRL + A+ FYAEH + FF L
Sbjct: 4 ERTFSIIKPDAVERNLIGKILARFEQSGFEIVAAKMVRLTKAQAEGFYAEHQGKPFFEDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
++YM S P+L VL+KENA+ D+R LIG TD KAK
Sbjct: 64 VEYMVSAPILVSVLQKENAVKDYRTLIGATDPAKAK 99
>sp|Q89MS3|NDK_BRAJA Nucleoside diphosphate kinase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=ndk PE=3 SV=1
Length = 140
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N T + VI ++G I+ ++ +R+ ++ A+TFYA H +R FF L
Sbjct: 4 ERTFSIIKPDATARNLTGAVNAVIEKAGLRIVAQKRIRMTKEQAETFYAVHKARPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+++MTSGPV+ VLE ENA+ +R +G TD KA +LY G
Sbjct: 64 VEFMTSGPVVVQVLEGENAVAKYRDAMGATDPSKAAEGTIRKLYAKSIG 112
>sp|C6E0H6|NDK_GEOSM Nucleoside diphosphate kinase OS=Geobacter sp. (strain M21) GN=ndk
PE=3 SV=1
Length = 137
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T A+IKPD + N T ++ +I E GF I+ + +RL + A+ FY H R FF L
Sbjct: 2 ERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDL 61
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+M+ GPV+A+VLEKENAI DWRAL+G T+ A+
Sbjct: 62 CAFMSRGPVIALVLEKENAIADWRALMGATNPANAE 97
>sp|B6JGK9|NDK_OLICO Nucleoside diphosphate kinase OS=Oligotropha carboxidovorans
(strain ATCC 49405 / DSM 1227 / OM5) GN=ndk PE=3 SV=1
Length = 140
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N T + +I ++G I+ ++ +R+ + A+TFYA H +R FF L
Sbjct: 4 ERTFSIIKPDATARNLTGAVNAIIEKAGLRIIAQKRIRMTREQAETFYAVHKARPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +MTSGPV+ VLE +NAI+ +R ++G TD KA +++ L G
Sbjct: 64 VDFMTSGPVVVQVLEGDNAISKYREVMGATDPSKAADGTIRKVHALSIG 112
>sp|B0USF1|NDK_HAES2 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336)
GN=ndk PE=3 SV=1
Length = 141
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 68/96 (70%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TLA+IKPD + N I + + GF I+ +++ L+++ A+ FYAEH +++FF+ L
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYAEHRNKAFFTEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+KYMTS P++ +VL+KENA+ D+R +G T+ + A+
Sbjct: 64 VKYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAE 99
>sp|B5E9D0|NDK_GEOBB Nucleoside diphosphate kinase OS=Geobacter bemidjiensis (strain Bem
/ ATCC BAA-1014 / DSM 16622) GN=ndk PE=3 SV=1
Length = 137
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T A+IKPD + N T ++ +I E GF I+ + +RL + A+ FY H R FF L
Sbjct: 2 ERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDL 61
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+M+ GPV+A+VLEKENAI DWR L+G T+ A+
Sbjct: 62 CAFMSRGPVIALVLEKENAIADWRGLMGATNPANAE 97
>sp|Q0I2G6|NDK_HAES1 Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt)
GN=ndk PE=3 SV=1
Length = 141
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 67/96 (69%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TLA+IKPD + N I + + GF I+ +++ L+++ A+ FY EHS ++FF+ L
Sbjct: 4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYTEHSDKAFFAEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
I+YMTS P++ +VL+KENA+ D+R +G T+ + A+
Sbjct: 64 IRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAE 99
>sp|B8IH88|NDK_METNO Nucleoside diphosphate kinase OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=ndk PE=3 SV=1
Length = 140
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 66/109 (60%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T +++KPD + N T I VI E+G I+ +R +R+ E AKTFY H+ R F+ L
Sbjct: 4 ERTFSILKPDATARNLTGAINAVIEEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +MTSGPV+ VLE ENA+ +R ++G T+ +A + + L G
Sbjct: 64 VSFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAAEGTIRKKFALSVG 112
>sp|P90666|TXND3_HELCR Thioredoxin domain-containing protein 3 homolog OS=Heliocidaris
crassispina GN=NME8 PE=1 SV=1
Length = 837
Score = 92.8 bits (229), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 9 FILACISSPCRSLSNGSVEKEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLD 68
F+L S P + EKTLA+I+P L ++ DE+ + I E+GF + +++V+L
Sbjct: 336 FLLPNFSVPIVPGTGPPPTIEKTLALIRPSALK-DHKDEMLQKIQEAGFEVCLQKMVQLT 394
Query: 69 EDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHP 128
ED AK FY E F LI+ MTSG VLA+ L KE+AI WR IGPT +AK P
Sbjct: 395 EDQAKEFYKEQEGTPHFEDLIREMTSGEVLALGLAKESAIQSWREFIGPTTIDEAKEKAP 454
Query: 129 HRL---YVLP 135
L Y +P
Sbjct: 455 DSLRAQYSIP 464
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 28 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSS 87
K+ TLA+IKPD +G + + I + I E+GF+I +R V L+++ A Y EH + F+ +
Sbjct: 490 KQTTLAVIKPDA-AGEHKEAIIEKIKEAGFNISLQRDVELNKELASKLYLEHEGKEFYEN 548
Query: 88 LIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVL 134
LI +M+SG + MVL +E+A+ WR L+GPTD A+ P L L
Sbjct: 549 LIDHMSSGLSMVMVLSREDAVDGWRTLMGPTDPDYAREHAPESLRAL 595
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 26 VEKEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFF 85
V KE T+ +IKPD ++ + D I I E GF IL L ED A+ FY +H F
Sbjct: 199 VPKEVTVVLIKPDAVANGHVDSIIAKIEEHGFEILTTEDKTLTEDEAREFYKQHEEEEHF 258
Query: 86 SSLIKYMTSGPVLAMVLEK----ENAITDWRALIGPTDAKKAKISHPHRL 131
L+ +M SGP +VL + E +++ R L+GP D + AK P L
Sbjct: 259 EVLVTFMASGPSKILVLTRGDTGEGVVSEVRNLLGPKDIEVAKEEAPDSL 308
>sp|P56597|NDK5_HUMAN Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5
PE=2 SV=1
Length = 212
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 20 SLSNGSVEKEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEH 79
S+ + EKTLA+IKPD + +EI+ +IL SGF+I++ R +RL + FY E
Sbjct: 4 SMPPPQIYVEKTLAIIKPDIVDKE--EEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEK 61
Query: 80 SSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRL 131
+ FF +L YM+SGP++AM+L + AI+ W L+GP ++ AK +HP L
Sbjct: 62 YGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSL 113
>sp|Q99MH5|NDK5_MOUSE Nucleoside diphosphate kinase homolog 5 OS=Mus musculus GN=Nme5
PE=2 SV=2
Length = 211
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
EKTLA+IKPD + +EI+ +IL SGF+I++ R + L + FY E + FF +L
Sbjct: 13 EKTLALIKPDVVDKE--EEIQDIILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKMFFPNL 70
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRL 131
YM+SGP++AM+L + AI+ W+ L+GP+++ AK +HP L
Sbjct: 71 TAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSL 113
>sp|B0SJT4|NDK_LEPBP Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=ndk PE=3 SV=1
Length = 137
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T M+KPD + + +I + I + GF IL + ++L + AK FYA H++R F++ L
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAARPFYNDL 61
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
YM SGP++A LE++NA+ WR +IG TD K+AK
Sbjct: 62 CTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK 97
>sp|B0S9J3|NDK_LEPBA Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=ndk PE=3 SV=1
Length = 137
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T M+KPD + + +I + I + GF IL + ++L + AK FYA H++R F++ L
Sbjct: 2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAARPFYNDL 61
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
YM SGP++A LE++NA+ WR +IG TD K+AK
Sbjct: 62 CTYMASGPIVACALERDNAVAHWRDVIGATDPKEAK 97
>sp|Q056E8|NDK_LEPBL Nucleoside diphosphate kinase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=ndk PE=3 SV=1
Length = 137
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%)
Query: 30 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLI 89
KT MIKPDG+ + I I + GF IL + ++L + AK FY HS+R F+S L
Sbjct: 3 KTFIMIKPDGVKNKHVGNILARIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYSDLC 62
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYV 133
YM+SGP++A LE++NA+ WR +IG TD K+A LY
Sbjct: 63 NYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYA 106
>sp|Q04P86|NDK_LEPBJ Nucleoside diphosphate kinase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=ndk PE=3 SV=1
Length = 137
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%)
Query: 30 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLI 89
KT MIKPDG+ + I I + GF IL + ++L + AK FY HS+R F+S L
Sbjct: 3 KTFIMIKPDGVKNKHVGNILARIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYSDLC 62
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYV 133
YM+SGP++A LE++NA+ WR +IG TD K+A LY
Sbjct: 63 NYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYA 106
>sp|B0UIS8|NDK_METS4 Nucleoside diphosphate kinase OS=Methylobacterium sp. (strain 4-46)
GN=ndk PE=3 SV=1
Length = 140
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T +++KPD + N T I VI E+G I+ +R +R+ E AKTFY H+ R F+ L
Sbjct: 4 ERTFSILKPDATARNLTGAINAVIEEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +MTSGPV+ VLE +NA+ +R ++G T+ +A + + + G
Sbjct: 64 VSFMTSGPVVVQVLEGDNAVAKYREVMGATNPAQAAEGTIRKRFAVSVG 112
>sp|C1DE61|NDK_AZOVD Nucleoside diphosphate kinase OS=Azotobacter vinelandii (strain DJ
/ ATCC BAA-1303) GN=ndk PE=3 SV=1
Length = 143
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD ++ N EI ++G S++ ++V+L E A FYAEH R FF L
Sbjct: 4 ERTLSIIKPDAVAKNVIGEILTRFEKAGLSVVAAKMVQLSEREAGGFYAEHKERPFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+ +MTSGPV+ VLE E AI R L+G TD KKA+
Sbjct: 64 VSFMTSGPVVVQVLEGEGAIAKNRELMGATDPKKAE 99
>sp|A5UI22|NDK_HAEIG Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
PittGG) GN=ndk PE=3 SV=1
Length = 140
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N I ++GF I+ ++VRL + A+ FYAEH + FF+ L
Sbjct: 3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPL 62
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
++YM S P++ VLEKENA+ D+R LIG T+ + A+
Sbjct: 63 VEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETAE 98
>sp|A5UDJ8|NDK_HAEIE Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
PittEE) GN=ndk PE=3 SV=1
Length = 140
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N I ++GF I+ ++VRL + A+ FYAEH + FF+ L
Sbjct: 3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPL 62
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
++YM S P++ VLEKENA+ D+R LIG T+ + A+
Sbjct: 63 VEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETAE 98
>sp|Q9CM17|NDK_PASMU Nucleoside diphosphate kinase OS=Pasteurella multocida (strain
Pm70) GN=ndk PE=3 SV=1
Length = 139
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD + + I ++GF ++ +++ L + A+ FYAEH ++FF L
Sbjct: 4 ERTLSLIKPDAVKRHLIGAILSRFEQAGFRVVAAKMLHLTQAQAEGFYAEHQDKAFFPEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTD 119
+ YM S PVLA+VLEKENA+ D+R LIG T+
Sbjct: 64 VAYMISAPVLALVLEKENAVKDYRTLIGATN 94
>sp|Q1QD23|NDK_PSYCK Nucleoside diphosphate kinase OS=Psychrobacter cryohalolentis
(strain K5) GN=ndk PE=3 SV=1
Length = 143
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%)
Query: 28 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSS 87
E+TL++IKPD ++GN I +SG I+ ++++LD+ A FYAEH+ R F++
Sbjct: 3 NERTLSIIKPDAVAGNNIGAIYDRFEKSGLKIVAAKMMQLDDKKAGGFYAEHAERPFYND 62
Query: 88 LIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
L+ +MTSGPVL VLE ENAI R ++G T+ K A
Sbjct: 63 LVSFMTSGPVLVSVLEGENAIATHRDIMGATNPKDA 98
>sp|Q8EYP5|NDK_LEPIN Nucleoside diphosphate kinase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=ndk
PE=3 SV=1
Length = 137
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 30 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLI 89
+T MIKPDG+ + I I + GF IL + ++L + AK FY HS+R F++ L
Sbjct: 3 RTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLC 62
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYV 133
YM+SGP++A LE++NA+ WR +IG TD K+A LY
Sbjct: 63 NYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYA 106
>sp|Q72M65|NDK_LEPIC Nucleoside diphosphate kinase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=ndk PE=3 SV=1
Length = 137
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%)
Query: 30 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLI 89
+T MIKPDG+ + I I + GF IL + ++L + AK FY HS+R F++ L
Sbjct: 3 RTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLC 62
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYV 133
YM+SGP++A LE++NA+ WR +IG TD K+A LY
Sbjct: 63 NYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALYA 106
>sp|Q6MEA7|NDK2_PARUW Nucleoside diphosphate kinase 2 OS=Protochlamydia amoebophila
(strain UWE25) GN=ndk2 PE=3 SV=1
Length = 143
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD + N+ EI ++G I+ ++ +LD A+ FYA H R FF L
Sbjct: 4 ERTLSIIKPDAVGNNHIGEIIARFEKAGLRIVAAKMKQLDRKDAEGFYAVHKGRPFFEDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MT+GPV+ MVLE ENAI R ++G TD KKA
Sbjct: 64 VGFMTTGPVMIMVLEGENAINKNREIMGATDPKKA 98
>sp|Q2Y6F2|NDK_NITMU Nucleoside diphosphate kinase OS=Nitrosospira multiformis (strain
ATCC 25196 / NCIMB 11849) GN=ndk PE=3 SV=1
Length = 141
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD ++ N EI +G I+ R+VRL + A+ FYA H R FF+ L
Sbjct: 4 ERTLSIIKPDAVAKNIIGEIYSRFERNGLKIVASRMVRLSQADAEGFYAVHRERPFFNDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+K+M SGPV+ VLE E+AI R L+G TD +KA+
Sbjct: 64 VKFMISGPVMVQVLEGEDAIRKNRDLMGATDPRKAE 99
>sp|A5FY40|NDK_ACICJ Nucleoside diphosphate kinase OS=Acidiphilium cryptum (strain JF-5)
GN=ndk PE=3 SV=1
Length = 140
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD N T I E+G I+ ++ +RL +D A+ FY H R FF+ L
Sbjct: 4 ERTLSIIKPDATRRNLTGRINAKFEEAGLRIVAQKRIRLTKDQAEAFYGVHKERPFFAGL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+ +MTSGPV+ VLE ++A+ RA++G TD +KA+
Sbjct: 64 VSFMTSGPVVVQVLEGDDAVARNRAIMGATDPRKAE 99
>sp|Q59636|NDK_PSEAE Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ndk
PE=3 SV=2
Length = 143
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++TL++IKPD +S N EI ++G ++ ++V+L E A FYAEH R FF L
Sbjct: 4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE E+AI R L+G TD KKA
Sbjct: 64 VSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98
>sp|Q02RW1|NDK_PSEAB Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=ndk PE=3 SV=1
Length = 143
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++TL++IKPD +S N EI ++G ++ ++V+L E A FYAEH R FF L
Sbjct: 4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE E+AI R L+G TD KKA
Sbjct: 64 VSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98
>sp|B7UWI4|NDK_PSEA8 Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain
LESB58) GN=ndk PE=3 SV=1
Length = 143
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++TL++IKPD +S N EI ++G ++ ++V+L E A FYAEH R FF L
Sbjct: 4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE E+AI R L+G TD KKA
Sbjct: 64 VSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98
>sp|A6V0V6|NDK_PSEA7 Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain
PA7) GN=ndk PE=3 SV=1
Length = 143
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++TL++IKPD +S N EI ++G ++ ++V+L E A FYAEH R FF L
Sbjct: 4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE E+AI R L+G TD KKA
Sbjct: 64 VSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98
>sp|A4VNX5|NDK_PSEU5 Nucleoside diphosphate kinase OS=Pseudomonas stutzeri (strain
A1501) GN=ndk PE=3 SV=1
Length = 143
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++T ++IKPD ++ N EI ++G ++ ++V+L E A FYAEHS R FF L
Sbjct: 4 QRTFSIIKPDAVAKNVIGEITTRFEKAGLRVVASKMVQLSEREAAGFYAEHSERGFFKDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE ENA+ R L+G T+ K+A
Sbjct: 64 VAFMTSGPVIVQVLEGENAVAKNRELMGATNPKEA 98
>sp|Q9QXL7|NDK7_RAT Nucleoside diphosphate kinase 7 OS=Rattus norvegicus GN=Nme7 PE=1
SV=1
Length = 395
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Query: 28 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSS 87
KEKTLA+IKPD +S EI ++I +SGF+I + R++ L A F+ +H SR F++
Sbjct: 110 KEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLSRKEAADFHVDHHSRPFYNE 167
Query: 88 LIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
LI+++TSGPV+AM + +++AI +W+ L+GP ++ A+ P + L FG
Sbjct: 168 LIQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAPGSVRAL-FG 216
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 31 TLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSS-RSFFSSLI 89
T +IKP +S +I I ++ F I ++ +D + FY + S ++ ++
Sbjct: 259 TCCIIKPHAISEGMLGKILIAIRDACFEISAIQMFNMDRANVEEFYEVYKGVLSDYNDMV 318
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRL 131
+ SGP +A+ +++ N +R GP+D + A+ P L
Sbjct: 319 TELYSGPCVAIEIQQSNPTKTFREFCGPSDPEIARHLRPETL 360
>sp|Q9QXL8|NDK7_MOUSE Nucleoside diphosphate kinase 7 OS=Mus musculus GN=Nme7 PE=2 SV=1
Length = 395
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Query: 28 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSS 87
KEKTLA+IKPD +S EI ++I +SGF+I + R++ L A F+ +H SR F++
Sbjct: 110 KEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLTRKEAADFHVDHHSRPFYNE 167
Query: 88 LIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
LI+++TSGPV+AM + +++AI +W+ L+GP ++ ++ P + L FG
Sbjct: 168 LIQFITSGPVIAMEILRDDAICEWKRLLGPANSGLSRTDAPGSIRAL-FG 216
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 31 TLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSR-SFFSSLI 89
T +IKP +S + I ++ F + ++ LD + FY + S ++ ++
Sbjct: 259 TCCIIKPHAISEGMLGKNLIAIRDACFGMSAIQMFNLDRANVEEFYEVYKGVVSEYNDMV 318
Query: 90 KYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ SGP +A+ +++ N +R GP D + A+ P L + FG
Sbjct: 319 TELCSGPCVAIEIQQSNPTKTFREFCGPADPEIARHLRPETLRAI-FG 365
>sp|A5WGQ5|NDK_PSYWF Nucleoside diphosphate kinase OS=Psychrobacter sp. (strain PRwf-1)
GN=ndk PE=3 SV=1
Length = 143
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 62/95 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD + GN+ I E+G I+ +++ LD++ A FYAEH R F++ L
Sbjct: 4 ERTLSIIKPDAVGGNHIGAIYSRFEEAGLKIVGAKMLHLDDEKAGGFYAEHKERPFYNDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +MTSGPV+ VLE ENAI R ++G T+ +A
Sbjct: 64 VSFMTSGPVVVSVLEGENAIAKHREIMGATNPAEA 98
>sp|Q1QTL2|NDK_CHRSD Nucleoside diphosphate kinase OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=ndk
PE=3 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%)
Query: 28 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSS 87
E+TL++IKPD ++ N EI+ ++G I+ ++++L + A+ FYAEH R FF
Sbjct: 3 NERTLSIIKPDAVAKNVIGEIESRFEKAGLKIVAAKMLQLSQAQAEGFYAEHKERPFFGD 62
Query: 88 LIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
L+ +MTSGPV+ VLE ENAI R L+G T+ K+A
Sbjct: 63 LVGFMTSGPVIVQVLEGENAIAANRDLMGATNPKEA 98
>sp|Q8KAZ6|NDK_CHLTE Nucleoside diphosphate kinase OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=ndk PE=3 SV=1
Length = 140
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL ++KPD + + +I +GF I+ + RL ++ A FYA H R F+ L
Sbjct: 2 ERTLTILKPDCVRKQLIGAVTNMIERAGFRIVAMKKTRLTKETAGAFYAVHKERPFYGEL 61
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLY 132
+++M+SGP + M+LEKENA+ D+R LIG TD +A +LY
Sbjct: 62 VEFMSSGPCVPMILEKENAVADFRTLIGATDPAQADEGTIRKLY 105
>sp|Q1IJS7|NDK_KORVE Nucleoside diphosphate kinase OS=Koribacter versatilis (strain
Ellin345) GN=ndk PE=3 SV=1
Length = 141
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 65/96 (67%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
++TL++IKPD + N +I ++L + F IL +++ L ++ A+ FYA H+++ FF SL
Sbjct: 5 QRTLSIIKPDAVEKNAEGDIISILLNNNFRILGIKMLHLTKNQAEGFYAVHANKPFFHSL 64
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+M SGP++ M LEKENAI D+R L+G T+ A+
Sbjct: 65 TDFMASGPIVVMCLEKENAIADYRKLMGATNPANAE 100
>sp|A4YTA2|NDK_BRASO Nucleoside diphosphate kinase OS=Bradyrhizobium sp. (strain ORS278)
GN=ndk PE=3 SV=1
Length = 140
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD N T I +I ++G I+ ++ +R+ D A+TFYA H +R FF L
Sbjct: 4 ERTFSIIKPDATERNLTGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKARPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+ +M SGPV+ VLE E AI +R ++G TD KA
Sbjct: 64 VDFMISGPVVVQVLEGEGAILKYRDVMGATDPSKA 98
>sp|Q1QLH8|NDK_NITHX Nucleoside diphosphate kinase OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=ndk PE=3 SV=1
Length = 140
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T +++KPD + N T I +I ++G I+ ++ +R+ + A+TFYA H +R FF L
Sbjct: 4 ERTFSILKPDATARNLTGAINALIEKAGLRIVAQKRIRMTREQAETFYAVHKARPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +M SGPV+ VLE ENA+ R ++G TD KA +L+ G
Sbjct: 64 VDFMISGPVVVQVLEGENAVLKHREIMGATDPSKAADGTIRKLHATSVG 112
>sp|Q1H0U5|NDK_METFK Nucleoside diphosphate kinase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=ndk PE=3 SV=1
Length = 141
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+TL++IKPD ++ N +I ++G I+ ++V+L + A+ FYA H R FF+ L
Sbjct: 4 ERTLSIIKPDAVAKNVIGKIYTRFEDAGLKIIASKMVQLSQADAEGFYAVHKERPFFNDL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAK 124
+K+M SGPV+ VLE ENA+ R L+G TD KKA+
Sbjct: 64 VKFMISGPVVVQVLEGENAVLKHRELMGATDPKKAE 99
>sp|P43802|NDK_HAEIN Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ndk PE=3 SV=1
Length = 141
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N I ++GF I+ ++VRL + A+ FYAEH + FF L
Sbjct: 4 ERTFSIIKPDVVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFVPL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++YM S P++ VLEKENA+ D+R LIG T+ + A
Sbjct: 64 VEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETA 98
>sp|C3LT09|NDK_VIBCM Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain M66-2) GN=ndk PE=3 SV=1
Length = 142
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N EI I ++G I+ ++V L E+ A FYAEH + FF L
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++MTSGP++ VLE ENAI +R L+G T+ ++A
Sbjct: 64 KEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEA 98
>sp|Q9KTX4|NDK_VIBCH Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=ndk PE=3
SV=1
Length = 142
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N EI I ++G I+ ++V L E+ A FYAEH + FF L
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++MTSGP++ VLE ENAI +R L+G T+ ++A
Sbjct: 64 KEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEA 98
>sp|A5F3F7|NDK_VIBC3 Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1
Length = 142
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N EI I ++G I+ ++V L E+ A FYAEH + FF L
Sbjct: 4 ERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++MTSGP++ VLE ENAI +R L+G T+ ++A
Sbjct: 64 KEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEA 98
>sp|Q312A8|NDK_DESDG Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans
(strain G20) GN=ndk PE=3 SV=1
Length = 139
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T A+IKPD N I VI ++G ++ + +RL + A+ FY H R FF+SL
Sbjct: 3 ERTFAIIKPDATRRNLEGPILSVIQQNGLRVVAMKKMRLTREQAEGFYHVHKERPFFASL 62
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
+MTSGP++AMVLE +NA+ WR L+G T+ + A
Sbjct: 63 TDFMTSGPIVAMVLEGDNAVARWRELMGATNPENA 97
>sp|B3Q9R4|NDK_RHOPT Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain
TIE-1) GN=ndk PE=3 SV=1
Length = 140
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T +++KPD N T I +I ++G I+ ++ +R+ D A+TFYA H R FF L
Sbjct: 4 ERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKERPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +M SGPV+ VLE E AI +R ++G TD KA +L+ G
Sbjct: 64 VDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIG 112
>sp|Q6N5C3|NDK_RHOPA Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=ndk PE=3 SV=1
Length = 140
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T +++KPD N T I +I ++G I+ ++ +R+ D A+TFYA H R FF L
Sbjct: 4 ERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKERPFFGEL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAKISHPHRLYVLPFG 137
+ +M SGPV+ VLE E AI +R ++G TD KA +L+ G
Sbjct: 64 VDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIG 112
>sp|Q7MNF4|NDK_VIBVY Nucleoside diphosphate kinase OS=Vibrio vulnificus (strain YJ016)
GN=ndk PE=3 SV=1
Length = 141
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 63/95 (66%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N EI I ++G I+ ++V L+++ A FYAEH + FF +L
Sbjct: 4 ERTFSIIKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPAL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++MTSGP++ VLE ENAI +R L+G T+ ++A
Sbjct: 64 KEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEA 98
>sp|Q8DEZ5|NDK_VIBVU Nucleoside diphosphate kinase OS=Vibrio vulnificus (strain CMCP6)
GN=ndk PE=3 SV=1
Length = 141
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 63/95 (66%)
Query: 29 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSL 88
E+T ++IKPD + N EI I ++G I+ ++V L+++ A FYAEH + FF +L
Sbjct: 4 ERTFSIIKPDAVERNLIGEIYHRIEKAGLRIIAAKMVHLNDEQASGFYAEHEGKEFFPAL 63
Query: 89 IKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 123
++MTSGP++ VLE ENAI +R L+G T+ ++A
Sbjct: 64 KEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEA 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,570,046
Number of Sequences: 539616
Number of extensions: 1722699
Number of successful extensions: 5404
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4589
Number of HSP's gapped (non-prelim): 783
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)