Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>032595
MVILQVPWMQVSRSRSLLLMVKPQVFLVAIWMGTLLHLILLAFNAFSVWSLSVISGDCQS
VFAKKENTNAVVLVASQKTLPVLVAVVEQLGCAFGESGLLVLPCVAAHLTQIIMDSFLVN
FWLRRDKDLSSNNAKVA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032595
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2078471 - symbol:AT3G56160 species:3702 "Arabi...   416  6.1e-39   1


>TAIR|locus:2078471 [details] [associations]
            symbol:AT3G56160 species:3702 "Arabidopsis thaliana"
            [GO:0006814 "sodium ion transport" evidence=IEA] [GO:0008508 "bile
            acid:sodium symporter activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0035725 "sodium ion transmembrane transport"
            evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            GO:GO:0016021 EMBL:CP002686 GO:GO:0006810 GO:GO:0009941
            EMBL:AL163763 IPI:IPI00543197 PIR:T47733 RefSeq:NP_191175.2
            UniGene:At.34960 ProteinModelPortal:F4IZC4 TCDB:2.A.93.1.2
            PRIDE:F4IZC4 EnsemblPlants:AT3G56160.1 GeneID:824782
            KEGG:ath:AT3G56160 GeneFarm:3263 TAIR:At3g56160 KO:K14347
            OMA:INGWSLL InterPro:IPR016833 PANTHER:PTHR18640 Pfam:PF13593
            Uniprot:F4IZC4
        Length = 436

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 89/132 (67%), Positives = 106/132 (80%)

Query:     6 VPWMQVSRSRSLLLMVKPQVFLVAIWMGTLLHLILLAFNAFSVWSLSVISGDCQSVFAKK 65
             VPW+QVSRSRSLLL V+P+VFL A+ +G LLHL LLAFNA S+  LS ++G  +S    K
Sbjct:   309 VPWIQVSRSRSLLLSVQPKVFLAAVGIGILLHLSLLAFNAVSIRILSGLTGGSKS---SK 365

Query:    66 ENTNAVVLVASQKTLPVLVAVVEQLGCAFGESGLLVLPCVAAHLTQIIMDSFLVNFWLRR 125
             EN+ AV+LV+SQKTLPV+VAVVEQLG AFGE+GLLVLPCVAAHL QI++DS LVN WLRR
Sbjct:   366 ENSTAVLLVSSQKTLPVMVAVVEQLGGAFGETGLLVLPCVAAHLNQIMIDSVLVNLWLRR 425

Query:   126 DKDLSSNNAKVA 137
              KD +S   K A
Sbjct:   426 GKD-TSTKVKTA 436


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.136   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       137   0.00091  102 3  11 22  0.46    30
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  132 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.60u 0.14s 13.74t   Elapsed:  00:00:01
  Total cpu time:  13.60u 0.14s 13.74t   Elapsed:  00:00:01
  Start:  Mon May 20 18:55:25 2013   End:  Mon May 20 18:55:26 2013

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