Query 032596
Match_columns 137
No_of_seqs 109 out of 403
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 05:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/032596.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/032596hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gsta1 a.45.1.1 (A:85-217) Cl 28.6 13 0.00092 23.9 1.8 26 30-56 106-131 (133)
2 d1gsua1 a.45.1.1 (A:85-217) Cl 21.6 22 0.0016 22.7 2.0 27 30-57 106-132 (133)
3 d2fhea1 a.45.1.1 (A:81-216) Cl 19.0 24 0.0018 22.9 1.8 27 30-57 105-131 (136)
4 d2gy9b1 c.23.15.1 (B:8-225) Ri 18.8 15 0.0011 26.8 0.7 33 43-75 150-191 (218)
5 d2c4ja1 a.45.1.1 (A:86-218) Cl 14.9 31 0.0023 22.0 1.5 26 30-56 106-131 (133)
6 d3gtub1 a.45.1.1 (B:85-224) Cl 14.3 10 0.00076 24.4 -1.1 26 30-56 110-135 (140)
7 d2uubb1 c.23.15.1 (B:7-240) Ri 14.1 22 0.0016 26.3 0.5 33 43-75 153-194 (234)
8 d2fiua1 d.58.4.16 (A:1-95) Hyp 11.8 30 0.0022 21.5 0.6 16 26-41 58-73 (95)
9 d1duga1 a.45.1.1 (A:81-220) Cl 8.8 71 0.0051 20.7 1.7 23 30-56 105-130 (140)
10 d1vi6a_ c.23.15.1 (A:) Ribosom 8.4 49 0.0036 23.7 0.8 21 54-74 131-151 (193)
No 1
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.62 E-value=13 Score=23.95 Aligned_cols=26 Identities=19% Similarity=0.417 Sum_probs=18.6
Q ss_pred hHHHHHHHcCCCCCccceeccccccch
Q 032596 30 MASVRAFWNSPVGPKTTHFWGPVANWG 56 (137)
Q Consensus 30 ~~~~~~~~~~paGPkT~hFWgPv~kWg 56 (137)
.+.+++++.++.=++. =|++|.++||
T Consensus 106 ~P~ik~yl~s~~~~~~-p~~~~~a~~~ 131 (133)
T d2gsta1 106 LKKISAYMKSSRYLST-PIFSKLAQWS 131 (133)
T ss_dssp SHHHHHHHTSTTCCCC-CCSCTTSSSS
T ss_pred CHHHHHHHhCCCcCCC-CCCCcccCcC
Confidence 5668888887654442 2569999998
No 2
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.56 E-value=22 Score=22.70 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=18.2
Q ss_pred hHHHHHHHcCCCCCccceeccccccchh
Q 032596 30 MASVRAFWNSPVGPKTTHFWGPVANWGF 57 (137)
Q Consensus 30 ~~~~~~~~~~paGPkT~hFWgPv~kWgi 57 (137)
.+.+++++.++.=.+- =+++|+++||.
T Consensus 106 ~P~Ik~yl~s~~~~~~-P~~~~~~~~~~ 132 (133)
T d1gsua1 106 LEKISAYMRSGRFMKA-PIFWYTALWNN 132 (133)
T ss_dssp SHHHHHHHTSSSCCCC-CCSCTTCSSSC
T ss_pred CHHHHHHHcCCCcCCC-CCCCcccccCC
Confidence 4567888888653332 24579999983
No 3
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica [TaxId: 6192]}
Probab=18.99 E-value=24 Score=22.95 Aligned_cols=27 Identities=22% Similarity=0.145 Sum_probs=19.9
Q ss_pred hHHHHHHHcCCCCCccceeccccccchh
Q 032596 30 MASVRAFWNSPVGPKTTHFWGPVANWGF 57 (137)
Q Consensus 30 ~~~~~~~~~~paGPkT~hFWgPv~kWgi 57 (137)
...+++++.|+.=. ...+.+|.++||-
T Consensus 105 ~P~Ik~yl~S~~~~-~~P~~~~~a~~~~ 131 (136)
T d2fhea1 105 LPSIKAYMESNRFI-KWPLNGWHAQFGG 131 (136)
T ss_dssp SHHHHHHHTSSSCC-CSCSSCTTCSSSC
T ss_pred CHHHHHHHcCcccC-CCCCCCCcCccCC
Confidence 45688999886533 3668899999973
No 4
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli [TaxId: 562]}
Probab=18.85 E-value=15 Score=26.76 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=27.6
Q ss_pred Cccceeccccc---------cchhhhhcccCCCCCCcccccc
Q 032596 43 PKTTHFWGPVA---------NWGFVVAGLVDLKKPPEMISGN 75 (137)
Q Consensus 43 PkT~hFWgPv~---------kWgi~iA~i~D~~kppE~IS~~ 75 (137)
|.-+..-.|.- +=+||+.|+.|.+-+|+.|+.+
T Consensus 150 Pd~vii~d~~~~~~ai~Ea~~l~IP~I~ivDTn~dp~~idyp 191 (218)
T d2gy9b1 150 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFV 191 (218)
T ss_dssp CCEEEESCTTTTHHHHHHHHHTTCCEEECCCSSSCGGGCTEE
T ss_pred CceeeeccccccHHHHHHHHHcCCCEEEEeeCCCCCccCcee
Confidence 77777777654 6789999999999999999765
No 5
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.90 E-value=31 Score=22.02 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=19.0
Q ss_pred hHHHHHHHcCCCCCccceeccccccch
Q 032596 30 MASVRAFWNSPVGPKTTHFWGPVANWG 56 (137)
Q Consensus 30 ~~~~~~~~~~paGPkT~hFWgPv~kWg 56 (137)
...++++++++.=. ..-+++|+++||
T Consensus 106 ~P~ik~yl~s~~~~-~~p~~~~~a~~g 131 (133)
T d2c4ja1 106 LEKISAYMKSSRFL-PRPVFSKMAVWG 131 (133)
T ss_dssp SHHHHHHHHSTTCC-CCCSSCTTCSSS
T ss_pred CHHHHHHHhCcccC-CCCCCCcccccC
Confidence 45578888885432 356889999998
No 6
>d3gtub1 a.45.1.1 (B:85-224) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.33 E-value=10 Score=24.38 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=14.7
Q ss_pred hHHHHHHHcCCCCCccceeccccccch
Q 032596 30 MASVRAFWNSPVGPKTTHFWGPVANWG 56 (137)
Q Consensus 30 ~~~~~~~~~~paGPkT~hFWgPv~kWg 56 (137)
...++++++++.=++..++ +|.++||
T Consensus 110 ~P~Ik~yl~s~~~~~~p~~-~~~~~~~ 135 (140)
T d3gtub1 110 LEKIAAYLQSDQFCKMPIN-NKMAQWG 135 (140)
T ss_dssp SHHHHHHHHCHHHHTCBSS-CTTSSSS
T ss_pred CHHHHHHHhccCCCCCCCC-CCccccC
Confidence 3456677776432222222 7888887
No 7
>d2uubb1 c.23.15.1 (B:7-240) Ribosomal protein S2 {Thermus thermophilus [TaxId: 274]}
Probab=14.08 E-value=22 Score=26.30 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=26.0
Q ss_pred Cccceeccccc---------cchhhhhcccCCCCCCcccccc
Q 032596 43 PKTTHFWGPVA---------NWGFVVAGLVDLKKPPEMISGN 75 (137)
Q Consensus 43 PkT~hFWgPv~---------kWgi~iA~i~D~~kppE~IS~~ 75 (137)
|.-++--.|.- +=+||+-||.|.+-+|+.|+.+
T Consensus 153 Pd~viv~d~~~~~~Ai~Ea~~l~IPvIaivDTn~dp~~vdyp 194 (234)
T d2uubb1 153 PDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYI 194 (234)
T ss_dssp CSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTSCGGGCSEE
T ss_pred ceeEEEecCCccHHHHHHHHhhCCCEEEEeecCCCccCCcEE
Confidence 55666666643 7899999999999999998653
No 8
>d2fiua1 d.58.4.16 (A:1-95) Hypothetical protein Atu0297 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=11.75 E-value=30 Score=21.53 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=13.0
Q ss_pred cccchHHHHHHHcCCC
Q 032596 26 KYLSMASVRAFWNSPV 41 (137)
Q Consensus 26 ~~~~~~~~~~~~~~pa 41 (137)
+|-+++.+++||+||.
T Consensus 58 eFps~e~A~~~~~Spe 73 (95)
T d2fiua1 58 EFPSVQHAIDCYNSPE 73 (95)
T ss_dssp EESSHHHHHHHHHSHH
T ss_pred EcCCHHHHHHHHCCHH
Confidence 5667888999999973
No 9
>d1duga1 a.45.1.1 (A:81-220) Class alpha GST {Schistosoma japonicum [TaxId: 6182]}
Probab=8.80 E-value=71 Score=20.70 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=15.6
Q ss_pred hHHHHHHHcCC---CCCccceeccccccch
Q 032596 30 MASVRAFWNSP---VGPKTTHFWGPVANWG 56 (137)
Q Consensus 30 ~~~~~~~~~~p---aGPkT~hFWgPv~kWg 56 (137)
...+++++.|+ ..|.. +|.++||
T Consensus 105 ~P~Ik~yl~S~~~~~~P~~----~~~a~~~ 130 (140)
T d1duga1 105 IPQIDKYLKSSKYIAWPLQ----GWQATFG 130 (140)
T ss_dssp SHHHHHHHTSTTCCCCCSS----CTTCSSS
T ss_pred CHHHHHHHcCcccccCCCC----CcccccC
Confidence 45688999987 34433 5777776
No 10
>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=8.44 E-value=49 Score=23.73 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=18.4
Q ss_pred cchhhhhcccCCCCCCccccc
Q 032596 54 NWGFVVAGLVDLKKPPEMISG 74 (137)
Q Consensus 54 kWgi~iA~i~D~~kppE~IS~ 74 (137)
|=+||+.|+.|.+-+|..|+.
T Consensus 131 ~l~IPvI~ivDTn~~p~~vdy 151 (193)
T d1vi6a_ 131 AVGIPVVALCDSNNSSADVDL 151 (193)
T ss_dssp HTTCCEEEEECTTCCCTTCSE
T ss_pred HcCCCeeeEeccCCCCcccce
Confidence 567999999999999999864
Done!