BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>032599
MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLVG
DETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKE
DNNLSLIEYELVNVVEE

High Scoring Gene Products

Symbol, full name Information P value
AT1G23750 protein from Arabidopsis thaliana 1.2e-56
AT1G10590 protein from Arabidopsis thaliana 1.5e-51
AT2G33845 protein from Arabidopsis thaliana 2.6e-47
AT4G28440 protein from Arabidopsis thaliana 8.4e-42
AT1G03810 protein from Arabidopsis thaliana 1.6e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032599
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034813 - symbol:AT1G23750 "AT1G23750" species...   583  1.2e-56   1
TAIR|locus:2019918 - symbol:AT1G10590 "AT1G10590" species...   535  1.5e-51   1
TAIR|locus:505006287 - symbol:AT2G33845 "AT2G33845" speci...   495  2.6e-47   1
TAIR|locus:2121313 - symbol:AT4G28440 "AT4G28440" species...   443  8.4e-42   1
TAIR|locus:2024239 - symbol:AT1G03810 "AT1G03810" species...   412  1.6e-38   1


>TAIR|locus:2034813 [details] [associations]
            symbol:AT1G23750 "AT1G23750" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:2.40.50.140
            InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC005990 KO:K07466
            HOGENOM:HOG000237696 ProtClustDB:CLSN2717599 EMBL:AY085502
            EMBL:BT002959 EMBL:BT004437 IPI:IPI00527528 PIR:F86371
            RefSeq:NP_564202.1 UniGene:At.41522 ProteinModelPortal:Q9ZUC0
            SMR:Q9ZUC0 IntAct:Q9ZUC0 PaxDb:Q9ZUC0 PRIDE:Q9ZUC0
            EnsemblPlants:AT1G23750.1 GeneID:838985 KEGG:ath:AT1G23750
            TAIR:At1g23750 eggNOG:NOG298870 InParanoid:Q9ZUC0 OMA:RISECIV
            PhylomeDB:Q9ZUC0 ArrayExpress:Q9ZUC0 Genevestigator:Q9ZUC0
            Uniprot:Q9ZUC0
        Length = 137

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 112/137 (81%), Positives = 126/137 (91%)

Query:     1 MAES-KSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGDGTQVRQMRIAECLV 59
             MA+S K+GL+KP FTKVDQLRPGTSGH + VK+VSTKMVLQKGR DG Q RQ+RI+EC+V
Sbjct:     1 MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60

Query:    60 GDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVK 119
             GDETG+I+FTARNDQVDLMKEG+TV LRNAKIDM+KGSMRLAVDKWGRVEV EPA+F VK
Sbjct:    61 GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120

Query:   120 EDNNLSLIEYELVNVVE 136
             ED N+SLIEYELVNVVE
Sbjct:   121 EDTNMSLIEYELVNVVE 137


>TAIR|locus:2019918 [details] [associations]
            symbol:AT1G10590 "AT1G10590" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC007067
            KO:K07466 HOGENOM:HOG000237696 ProtClustDB:CLSN2717599
            IPI:IPI00516961 RefSeq:NP_849633.1 UniGene:At.14987
            ProteinModelPortal:Q9XIJ0 SMR:Q9XIJ0 STRING:Q9XIJ0 PRIDE:Q9XIJ0
            EnsemblPlants:AT1G10590.3 GeneID:837601 KEGG:ath:AT1G10590
            TAIR:At1g10590 InParanoid:Q9XIJ0 OMA:IEYELVS PhylomeDB:Q9XIJ0
            Genevestigator:Q9XIJ0 Uniprot:Q9XIJ0
        Length = 153

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 107/137 (78%), Positives = 123/137 (89%)

Query:     1 MAESKSGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQKGRGD--GTQVRQMRIAECL 58
             MAE+ S LRKPVFTKV++LRPGT+GH+L VKVV+TKMV+Q+G G   G Q RQMRIAECL
Sbjct:    15 MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 74

Query:    59 VGDETGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAE-PANFT 117
             VGDETG+IIFTARNDQVD+MKEG+ V LRNAKIDM+KGSMRLAVD+WGRVEVAE P + T
Sbjct:    75 VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 134

Query:   118 VKEDNNLSLIEYELVNV 134
             VK+DNNLSLIEYELV+V
Sbjct:   135 VKDDNNLSLIEYELVSV 151


>TAIR|locus:505006287 [details] [associations]
            symbol:AT2G33845 "AT2G33845" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:U78721
            UniGene:At.19977 KO:K07466 HOGENOM:HOG000237696
            ProtClustDB:CLSN2717599 UniGene:At.37877 UniGene:At.72891
            EMBL:AY087128 EMBL:AY136315 EMBL:BT000423 IPI:IPI00527615
            RefSeq:NP_565774.1 ProteinModelPortal:Q8RYC3 SMR:Q8RYC3
            PaxDb:Q8RYC3 PRIDE:Q8RYC3 EnsemblPlants:AT2G33845.1 GeneID:817953
            KEGG:ath:AT2G33845 TAIR:At2g33845 eggNOG:NOG318723
            InParanoid:Q8RYC3 OMA:RISECLV PhylomeDB:Q8RYC3 ArrayExpress:Q8RYC3
            Genevestigator:Q8RYC3 Uniprot:Q8RYC3
        Length = 182

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 98/130 (75%), Positives = 108/130 (83%)

Query:     9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVLQK-GRGDGTQVRQMRIAECLVGDETGMII 67
             +KPVF KVDQL+PGTSGHTLTVKVV    V QK G    + +R  RI+ECLVGDET  I+
Sbjct:    53 KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACIL 112

Query:    68 FTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLI 127
             FTARNDQV+LMK G TV LRNAKIDMFKGSMRLAVDKWGR+E  EPA+ TVKEDNNLSL+
Sbjct:   113 FTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLSLV 172

Query:   128 EYELVNVVEE 137
             EYELVNVVEE
Sbjct:   173 EYELVNVVEE 182


>TAIR|locus:2121313 [details] [associations]
            symbol:AT4G28440 "AT4G28440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            GO:GO:0005829 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021749
            EMBL:AL161572 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            KO:K07466 EMBL:AY050905 EMBL:AY056432 EMBL:AY091407 EMBL:AY088082
            IPI:IPI00540456 PIR:T04614 RefSeq:NP_194573.1 UniGene:At.23199
            PDB:1WJJ PDBsum:1WJJ ProteinModelPortal:O49453 SMR:O49453
            IntAct:O49453 STRING:O49453 PaxDb:O49453 PRIDE:O49453
            EnsemblPlants:AT4G28440.1 GeneID:828961 KEGG:ath:AT4G28440
            TAIR:At4g28440 eggNOG:NOG287921 HOGENOM:HOG000237696
            InParanoid:O49453 OMA:IVECLIG PhylomeDB:O49453
            ProtClustDB:CLSN2717599 EvolutionaryTrace:O49453
            Genevestigator:O49453 GermOnline:AT4G28440 Uniprot:O49453
        Length = 153

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 88/132 (66%), Positives = 105/132 (79%)

Query:     9 RKPVFTKVDQLRPGTSGHTLTVKVVSTKMVL---QKGRGDGTQVRQM---RIAECLVGDE 62
             RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K R   +  R     RI ECL+GDE
Sbjct:    18 RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query:    63 TGMIIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDN 122
             TG I+FTARNDQVDLMK G TVILRN++IDMFKG+MRL VDKWGR+E    A+FTVKEDN
Sbjct:    78 TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137

Query:   123 NLSLIEYELVNV 134
             NLSL+EYEL+NV
Sbjct:   138 NLSLVEYELINV 149


>TAIR|locus:2024239 [details] [associations]
            symbol:AT1G03810 "AT1G03810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC003027
            Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K07466
            HOGENOM:HOG000237696 ProtClustDB:CLSN2717599 IPI:IPI00518415
            PIR:F86168 RefSeq:NP_171877.1 UniGene:At.51473
            ProteinModelPortal:Q9ZWA3 SMR:Q9ZWA3 EnsemblPlants:AT1G03810.1
            GeneID:839403 KEGG:ath:AT1G03810 TAIR:At1g03810 eggNOG:NOG289657
            InParanoid:Q9ZWA3 OMA:TQPADFK PhylomeDB:Q9ZWA3
            Genevestigator:Q9ZWA3 Uniprot:Q9ZWA3
        Length = 143

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 79/127 (62%), Positives = 98/127 (77%)

Query:     9 RKPVFTKVDQLRPGTSGHTLTVKVVST---KMVLQKGRGDGTQVRQMRIAECLVGDETGM 65
             RKPVF KVDQL+PGTSGHTL VKV+ +   K  ++K       +   RIAECL+GD+TG 
Sbjct:    15 RKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAIRKSSLTQQPISSPRIAECLIGDDTGC 74

Query:    66 IIFTARNDQVDLMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLS 125
             I+FTARNDQVDLMK G TVILRNAKID+FK +MR+AVD+WGR+E+  P +F V   NNLS
Sbjct:    75 ILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGPVSFEVNRANNLS 134

Query:   126 LIEYELV 132
             L+EYE++
Sbjct:   135 LVEYEVI 141


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       137   0.00091  102 3  11 22  0.44    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.99u 0.09s 12.08t   Elapsed:  00:00:00
  Total cpu time:  11.99u 0.09s 12.08t   Elapsed:  00:00:00
  Start:  Mon May 20 19:06:55 2013   End:  Mon May 20 19:06:55 2013

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