BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 032603
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q65KJ5|FOSB_BACLD Metallothiol transferase FosB OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=fosB PE=3 SV=1
Length = 154
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 2 GIHLLKSEEPDNLPKAGKNINPKDNHISF--QCENMAIVERRLKEMKIDYVKSRVEEGGI 59
GI L +EE D + I+ HI+F Q E++ E++L ++ ++ +K R G
Sbjct: 48 GIWLAFNEEKD---IKRQEIHDSYTHIAFSIQQEDLPFWEKKLHDLGVNVLKGRKRHEG- 103
Query: 60 NVDQLFFHDPDGSMIEICNCDVL 82
+ D ++F DPDG E+ V
Sbjct: 104 DRDSIYFSDPDGHKFELHTGSVF 126
>sp|Q502D1|GLOD5_DANRE Glyoxalase domain-containing protein 5 OS=Danio rerio GN=glod5 PE=2
SV=1
Length = 163
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
Query: 9 EEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN----- 60
E+ NL + GK PK + ++ ++ + + D++K+ +EEG ++
Sbjct: 81 EQKINLHQVGKEFEPKAQTPTPGSADLCLITKTPLKAVADHLKACGVTIEEGPVDRTGAV 140
Query: 61 --VDQLFFHDPDGSMIEICN 78
+ L+F DPD ++IE+ N
Sbjct: 141 GPISSLYFRDPDDNLIEVSN 160
>sp|P94533|YSFE_BACSU Uncharacterized protein YsfE OS=Bacillus subtilis (strain 168)
GN=ysfE PE=4 SV=1
Length = 80
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 27 HISFQCENMAIVERRLKEMKIDYV-KSRVEEGGINVDQLFFHDPDGSMIEICN 78
I F EN+ V +R++E + + + +V+ G V + DPDG IEIC+
Sbjct: 27 EIGFVTENVEAVIKRMREQGVSIIGEPKVKPWGQTV--AYIADPDGHYIEICS 77
>sp|O52960|DNAK_APHHA Chaperone protein DnaK OS=Aphanothece halophytica GN=dnaK PE=2 SV=1
Length = 721
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 13 NLP------KAGKNINPKDNHISFQCENMAIVERRLKEMKIDYVKSRVEEGGINVDQL 64
NLP K G + PK ++ + R L E ID +K +E+ G++VDQ+
Sbjct: 276 NLPFITAFSKGGGEVGPKHLKLNLSRAKFNELSRPLVEKTIDPLKQAIEDSGLSVDQI 333
>sp|A6NK44|GLOD5_HUMAN Glyoxalase domain-containing protein 5 OS=Homo sapiens GN=GLOD5
PE=1 SV=3
Length = 160
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 13 NLPKAGKNINPKDNH-ISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN-------V 61
NL + GK PK H + + I E L+EM I ++K+ +EEG + +
Sbjct: 81 NLHEVGKEFEPKAAHPVPGSLDICLITEVPLEEM-IQHLKACDVPIEEGPVPRTGAKGPI 139
Query: 62 DQLFFHDPDGSMIEICN 78
++F DPD ++IE+ N
Sbjct: 140 MSIYFRDPDRNLIEVSN 156
>sp|P24486|NTP1_CBEPV Nucleoside triphosphatase I OS=Choristoneura biennis entomopoxvirus
GN=NPH1 PE=3 SV=1
Length = 648
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 5 LLKSEEPDNLPKAGKNINPKDNHISFQCENMAIVERRLKEMKI----------------D 48
LLK+ + + K I P DN I F+ I + R+KEM I D
Sbjct: 540 LLKASSIETIHNMHKYIEPVDNEIIFEI----IRKTRMKEMNISNVIINLKLYPITYCKD 595
Query: 49 YVKSRVEEGGINVDQLFFHDPDGSMIE-ICNCDVLPVVPLAGD 90
Y ++ + +G +N D +D D + + I + + LP+ + D
Sbjct: 596 YDRATILKGFLNKDTNIIYDNDTPVAKLIVDNNNLPIFVIEND 638
>sp|Q5WE80|FOSB_BACSK Metallothiol transferase FosB OS=Bacillus clausii (strain KSM-K16)
GN=fosB PE=3 SV=1
Length = 146
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 19 KNINPKDNHISFQCE--NMAIVERRLKEMKIDYVKSRVEEGGINVDQLFFHDPDGSMIEI 76
K I HI+F E + RL E D + R + ++F DPDG ++E+
Sbjct: 58 KEIRQSYTHIAFSIEESQLDAFYTRLLEAGADILPGRKRQVETEGKSIYFRDPDGHLLEV 117
>sp|P0C5H0|GLOD5_CANFA Glyoxalase domain-containing protein 5 OS=Canis familiaris GN=GLOD5
PE=2 SV=1
Length = 148
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 12/77 (15%)
Query: 13 NLPKAGKNINPKDNH-ISFQCENMAIVERRLKEMKIDYVKS---RVEEGGIN-------V 61
NL + GK PK H + + I E L+EM + ++K+ +EEG + +
Sbjct: 69 NLHEVGKEFEPKAAHPVPGSLDICLITEVPLEEM-VQHLKACEVPIEEGPVPRTGAKGPI 127
Query: 62 DQLFFHDPDGSMIEICN 78
++F DPD ++IE+ N
Sbjct: 128 MSIYFRDPDRNLIEVSN 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,956,614
Number of Sequences: 539616
Number of extensions: 2146770
Number of successful extensions: 5125
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5122
Number of HSP's gapped (non-prelim): 14
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)