Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>032606
MAGAKLCGGDTAFLLRSHSHSHSHFLEAATRRAAPFPGRVSSVSPNPKPSRYRILAMTVK
RSPKRLKYSAPQFTKEGGLMYVEADPSGADSWKLEPVVELLKEGAVGVIPTDTLYATAIC
LSRSVCNSLRFEEPFSD

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  032606
        (137 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2078668 - symbol:AT3G01920 species:3702 "Arabi...   285  4.6e-25   1


>TAIR|locus:2078668 [details] [associations]
            symbol:AT3G01920 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR006070 Pfam:PF01300
            PROSITE:PS51163 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AC010797 Gene3D:3.90.870.10 InterPro:IPR017945 SUPFAM:SSF55821
            eggNOG:COG0009 KO:K07566 TIGRFAMs:TIGR00057 UniGene:At.48610
            UniGene:At.41213 EMBL:AY079025 EMBL:AY143853 IPI:IPI00545644
            RefSeq:NP_566156.2 HSSP:P45847 ProteinModelPortal:Q9SGI3 SMR:Q9SGI3
            IntAct:Q9SGI3 STRING:Q9SGI3 PRIDE:Q9SGI3 EnsemblPlants:AT3G01920.1
            GeneID:821220 KEGG:ath:AT3G01920 TAIR:At3g01920
            HOGENOM:HOG000265231 InParanoid:Q9SGI3 OMA:LTLMCRD PhylomeDB:Q9SGI3
            ProtClustDB:CLSN2690515 Genevestigator:Q9SGI3 Uniprot:Q9SGI3
        Length = 307

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 68/131 (51%), Positives = 83/131 (63%)

Query:     1 MAGAKLCGGDTAFLLRXXXXXXXXFLEAATRRAAPFPGRVSSVSPNPKPSRYRILAMTVK 60
             MA AKL GG  A  +R              RR +  P   +S+SP     RY I+A+  K
Sbjct:     1 MAVAKLHGGGMA-AMRLLLLPS----PMTHRRPSTLPS-TASLSPR----RY-IVALAAK 49

Query:    61 RSPKRLKYSAPQFTKEGGLMYVEADPSGADSWKLEPVVELLKEGAVGVIPTDTLYATAI- 119
             RSPKRLKYS P+FTKEG L+Y+E DP G DSWKL+PV++LLK+GAVGVIPTDT+YA A  
Sbjct:    50 RSPKRLKYSTPRFTKEGELVYIEVDPCGVDSWKLQPVIDLLKQGAVGVIPTDTVYAIACD 109

Query:   120 CLSRSVCNSLR 130
             C + S    LR
Sbjct:   110 CKNHSAVERLR 120


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      137       129   0.00091  102 3  11 22  0.40    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  124 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.38u 0.20s 13.58t   Elapsed:  00:00:01
  Total cpu time:  13.38u 0.20s 13.58t   Elapsed:  00:00:01
  Start:  Thu May  9 18:06:19 2013   End:  Thu May  9 18:06:20 2013

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